<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Kemal (2013) Molecular Epidemiology of HIV Type 1 Subtypes in Rwanda AIDS Res. Hum. Retroviruses 29 (6), 957-962 (2013) 2.54e-168 57 30 Naive Plasma; PBMC Direct PCR Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
JQ364455105-6548Rwanda2005genomic RNAblood plasma12316A,14S,15V,27I,44A,58I,71D,83L,92P,111P,116A,120G,128D,148V,154K,169F,171I,183G,187D,200S,203R,208G
JQ364456105-7101Rwanda2005genomic RNAblood plasma12316L,15L,27I,33N,83L,91V,96L,110N,120S,148V,208G
JQ364457105-7292Rwanda2005genomic RNAblood plasma12316A,11I,15V,27I,54M,58I,71D,83L,87Q,92P,96L,111P,120G,128D,148V,154K,169F,171V,178T,183G,200S,203R,207T,208G,225S
JQ364458105-7309Rwanda2005genomic RNAblood plasma12316A,11I,14S,15L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,153V,154K,169F,171I,178T,180D,191I,203R,208G,210S
JQ364459105-7348Rwanda2005genomic RNAblood plasma12316A,11I,14V,15V,27I,31G,41T,58I,71D,83L,86A,87Q,92P,96L,111T,120S,128D,148V,154K,169F,180D,183S,187D,203R,208G
JQ364460105-7391Rwanda2005genomic RNAblood plasma12316A,14P,15M,27I,29D,31G,54M,58I,71D,83M,87Q,91F,92P,102G,111T,116A,120G,124V,131R,148V,154K,169F,178T,180D,187D,200A,203R,207T,208G
JQ364461105-7492Rwanda2005genomic RNAblood plasma12316A,11I,12Y,14S,19I,26A,27I,54M,58V,71D,83L,87P,91V,96L,98D,111P,116A,120S,128D,148V,154K,169F,178T,183G,200S,203R,207T,208G,225S
JQ364462105-7537Rwanda2005genomic RNAblood plasma12316A,11I,12Y,14P,15M,27I,31G,54M,58I,71D,79D,83L,92P,110N,111A,115L,120G,128D,148V,169F,178T,200S,203R,207T,208G
JQ364463105-7556Rwanda2005genomic RNAblood plasma12316V,12Y,14V,15M,27I,41T,54M,58I,71D,83L,87P,91L,92P,111P,116A,128D,148V,154K,169F,178A,180P,187D,200S,203R,208G,225S
JQ364464105-7587Rwanda2005genomic RNAblood plasma12316L,14P,15L,27I,41T,83L,91Q,96L,110N,115V,116A,148V,180D,208G,210S,225S
JQ364465105-7621Rwanda2005genomic RNAblood plasma12316A,12Y,14S,27I,54M,58I,71D,83L,92P,111T,116A,120G,123A,124V,128D,148V,154K,169F,178T,180D,187D,200S,203R,208G,210S,225S
JQ364466105-7717Rwanda2005genomic RNAblood plasma12316A,12Y,13N,14P,15V,27I,30R,54M,58I,71D,83L,87Q,92P,96L,111P,120S,128D,148V,154K,169F,178T,183G,187D,191I,200S,203R,207A,208G,225S
JQ364467105-7726Rwanda2005genomic RNAblood plasma12316A,14S,15L,27I,54M,58I,71D,83L,91P,111P,116A,120A,128D,148V,154K,169F,171V,180D,183G,187D,191I,200S,203R,207T,208G,210S
JQ364468105-7747Rwanda2005genomic RNAblood plasma12316T,12Y,14S,15V,27I,41T,54M,58I,71D,83L,86A,87Q,91Y,92P,96L,111P,116T,120S,128D,148V,154K,169F,178T,187D,200A,203R,208G
JQ364469105-7824Rwanda2005genomic RNAblood plasma12316A,14P,15L,27I,54M,58I,71D,83L,92P,96I,111S,116A,120G,128D,148V,154K,169F,171V,180D,187D,203R,207A,208G
JQ364470105-7895Rwanda2005genomic RNAblood plasma12316A,11I,14P,15M,27I,29D,31G,54M,58I,71D,83L,92P,110N,111T,120G,128D,148V,153V,154K,169F,171I,178T,183G,200S,203R,207T,208G,210S,225S
JQ364471105-7906Rwanda2005genomic RNAblood plasma12316A,11I,14N,15L,27I,50S,54M,58I,71D,83L,91V,92P,111P,120S,124V,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G
JQ364472105-7932Rwanda2005genomic RNAblood plasma12313M,6A,11T,12Y,14S,27I,44A,71D,75D,83L,92P,100S,120S,128D,148V,154K,169F,178T,183G,187D,191I,200N,203R,208G
JQ364473105-8002Rwanda2005genomic RNAblood plasma12316A,15V,27I,54M,58I,71D,87Q,92P,96I,111P,116A,120G,128D,148V,169F,178T,187D,191I,200S,203R,208G
JQ364474105-8008Rwanda2005genomic RNAblood plasma12316A,15V,26A,27I,30R,36I,44A,54M,58V,59I,71D,83L,92P,110N,111I,115V,120S,128D,148V,154K,169F,180D,200S,203R,208G
JQ364475105-8073Rwanda2005genomic RNAblood plasma12316A,11I,12Y,14S,15M,27I,31G,33N,54M,58I,71D,83L,87Q,92P,111P,120S,128D,148V,154K,169F,178T,183G,191I,200S,203R,207T,208G,225S
JQ364476105-8132Rwanda2005genomic RNAblood plasma12316A,11I,27I,54M,58I,71D,91A,92P,111I,120G,128D,148V,154K,169F,171A,178T,180D,200S,203R,208G
JQ364477105-8136Rwanda2005genomic RNAblood plasma123127I,83L,91V,116A,120G,123A,148V,154K,178T,225S,230I
JQ364478105-8198Rwanda2005genomic RNAblood plasma12316A,12Y,14S,15M,27I,54M,58I,71D,83L,87Q,92P,96L,111P,120G,128D,148V,154K,169F,171V,178T,183G,200S,203R,207S,208G
JQ364479105-8221Rwanda2005genomic RNAblood plasma12312V,6A,14P,15M,27I,31G,41T,54M,58I,71D,83L,87Q,92P,96L,111T,112P,120G,135V,148V,154K,169F,178T,187D,191I,200S,203R,207S,208G,210S,225S
JQ364480105-8222Rwanda2005genomic RNAblood plasma12316L,14P,27I,41T,71D,87Q,91V,96V,116A,120S,148V,169F,178T,180D,203R,208G,210S,225S
JQ364481105-8422Rwanda2005genomic RNAblood plasma12316A,11I,27I,45D,54M,58I,71D,83L,91A,92P,111I,120G,128D,148V,154K,169F,171I,178T,183G,200S,203R,207T,208G
JQ364482105-8441Rwanda2005genomic RNAblood plasma12316A,11I,14S,15L,27I,54M,58I,71D,83L,91V,92P,111P,120S,128D,148V,154K,169F,171C,178T,183G,200S,203R,207T,208G
JQ364483105-8717Rwanda2005genomic RNAblood plasma12316A,11I,14N,15L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,183G,191I,200S,203R,207T,208G
KC5136746548-PDRwanda2005genomic DNAPBMC12316A,11I,14S,15L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,183G,200S,203R,208G
KC5136757101-PDRwanda2005genomic DNAPBMC12316L,15L,27I,33N,83L,91V,96L,110N,120S,148V,208G
KC5136767292-PDRwanda2005genomic DNAPBMC12316A,15V,27I,54M,58I,71D,83L,87Q,92P,96L,111P,120G,128D,148V,154K,169F,171V,178T,183G,200S,203R,207T,208G,225S
KC5136777309-PDRwanda2005genomic DNAPBMC12046A,11I,14S,15L,27I,51E,54M,56V,58I,59G,65S,68K,69V,71D,83L,92P,100K,111P,120S,128D,148V,153V,154K,169F,171I,178T,180D,191I,200S,203R
KC5136787348-PDRwanda2005genomic DNAPBMC12316A,11I,14V,15V,27I,31G,41T,58I,71D,83L,86A,87Q,92P,96L,111T,120S,128D,148V,154K,169F,180D,183S,187D,203R,208G
KC5136797537-PDRwanda2005genomic DNAPBMC12316A,11I,12Y,14P,15M,27I,31G,54M,58I,71D,83L,92P,110N,111A,120G,128D,148V,169F,178T,183D,187D,200S,203R,207T,208G
KC5136807556-PDRwanda2005genomic DNAPBMC12316V,12Y,14V,15M,27I,41T,54M,58I,71D,83L,87P,91L,92P,111P,116A,128D,148V,154K,169F,178A,180P,187D,200S,203R,208G,225S
KC5136817587-PDRwanda2005genomic DNAPBMC12316A,11I,12Y,14S,15M,27I,31G,33N,54M,58I,71D,83L,87Q,92P,111P,120S,128D,148V,154K,169F,178T,183G,191I,200S,203R,207T,208G,225S
KC5136827621-PDRwanda2005genomic DNAPBMC12316A,12Y,14S,27I,54M,58I,71D,83L,92P,111T,116A,120G,123A,128D,148V,154K,169F,178T,180D,187D,200S,203R,208G,210S,225S
KC5136837717-PDRwanda2005genomic DNAPBMC12316A,12Y,13N,14P,15V,27I,30R,54M,58I,71D,83L,87Q,92P,96L,111P,120S,128D,148V,154K,169F,178T,183G,187D,191I,200S,203R,207A,208G,225S
KC5136847726-PDRwanda2005genomic DNAPBMC12316A,14S,15L,27I,30R,41T,54M,58I,71D,83L,91P,111P,116A,120A,128D,148V,154K,169F,171V,180D,183G,187D,191I,200S,203R,208G,210S,225S
KC5136857747-PDRwanda2005genomic DNAPBMC12316T,12Y,14S,15V,27I,41T,54M,58I,71D,83L,86A,87Q,91Y,92P,96L,111P,116T,120S,128D,148V,154K,169F,178T,187D,200A,203R,208G
KC5136867824-PDRwanda2005genomic DNAPBMC12046A,14T,15L,27I,54M,58I,71D,83L,87Q,92P,96I,111S,116A,120G,128D,148V,154K,169F,180D,187D,200S,203R
KC5136877895-PDRwanda2005genomic DNAPBMC12316A,11I,14P,15M,27I,29D,31G,54M,58I,71D,83L,92P,110N,111T,120G,128D,148V,153V,154K,169F,171I,178T,183G,200S,203R,207T,208G,210S,225S
KC5136887906-PDRwanda2005genomic DNAPBMC12316A,11I,14N,15L,27I,54M,58I,71D,83L,91V,92P,111P,120S,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G
KC5136897932-PDRwanda2005genomic DNAPBMC12313L,6A,11T,12Y,14S,27I,44A,71D,75D,83L,92P,100S,120S,128D,148V,154K,169F,178T,183G,187D,191I,200N,203R,208G
KC5136908002-PDRwanda2005genomic DNAPBMC12316A,15V,27I,54M,58I,71D,87Q,92P,96I,111P,116A,120G,128D,148V,169F,178T,187D,191I,200S,203R,208G
KC5136918008-PDRwanda2005genomic DNAPBMC12316A,15V,26A,27I,30R,36I,44A,54M,58V,59I,71D,83L,92P,110N,111I,115V,120S,128D,148V,154K,169F,180D,200S,203R,208G
KC5136928073-PDRwanda2005genomic DNAPBMC12316A,11I,12Y,14S,15M,27I,31G,33N,54M,58I,71D,83L,87Q,92P,111P,120S,128D,148V,154K,169F,178T,183G,191I,200S,203R,207T,208G,225S
KC5136938132-PDRwanda2005genomic DNAPBMC12046A,11I,27I,33N,35K,54M,58I,71D,92P,111I,120G,128D,148V,154K,169F,171A,178T,200S,203R
KC5136948136-PDRwanda2005genomic DNAPBMC123114S,27I,71D,83L,91V,116A,120G,123A,148V,154K,178T,225S,230I
KC5136958198-PDRwanda2005genomic DNAPBMC12316A,12Y,14S,15M,27I,54M,58I,71D,83L,87Q,92P,96L,111P,120G,128D,148V,154K,169F,171V,178T,183G,200S,203R,207S,208G
KC5136968221-PDRwanda2005genomic DNAPBMC12312V,6A,14P,15M,27I,31G,41T,54M,58I,71D,83L,87Q,92P,96L,111T,112P,120G,135V,148V,154K,169F,178T,191I,200S,203R,207T,208G,210S,225S
KC5136978222-PDRwanda2005genomic DNAPBMC12316L,14P,27I,41T,71D,91A,96I,116A,120S,148V,169F,178T,180D,203R,208G,210S,225S
KC5136988422-PDRwanda2005genomic DNAPBMC12316A,11I,27I,45D,54M,58I,71D,83L,91A,92P,111I,120G,128D,148V,154K,169F,178T,183G,200S,203R,207T,208G
KC5136998441-PDRwanda2005genomic DNAPBMC12316A,11I,14S,15L,27I,54M,58I,71D,83L,91V,92P,111P,120S,128D,148V,154K,169F,171C,178T,183G,200S,203R,207T,208G
KC5137008534-PDRwanda2005genomic DNAPBMC12316A,15V,26A,27I,48A,54M,58V,71D,83L,92P,120S,128D,148V,154K,169F,183G,187D,205S,206R,207A,208G,225S
KC5137018717-PDRwanda2005genomic DNAPBMC12316A,11I,14N,15L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,183G,191I,200S,203R,207T,208G

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