<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Li (2012) Recombination Form and Epidemiology of HIV-1 Unique Recombinant Strains Identified in Yunnan, China PLoS ONE 7 (10), E46777 (2012) 4.95e-165 60 60 Uncertain Plasma Direct PCR Molecular epidemiology

Download sequences

AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
JQ8981941431China2009genomic DNA12316L,14P,27I,41T,71D,83L,86I,91V,96I,116A,120S,124V,128D,169F,178T,180D,203R,208G,225S
JQ8981951434China2009genomic DNA12316L,14P,41ST,79D,83L,87Q,91V,120S,148S,154K,188S,225S
JQ8981961437China2009genomic DNA123114P,27I,79D,83L,87Q,91V,107S,116A,120S,124V,148V,180D,225S
JQ8981971439China2009genomic DNA12316L,14P,79D,83L,148S,160PS,180D,225S
JX6792071439China2009genomic DNA12316L,14P,79D,83L,148S,180D,225S
JQ8981981440China2009genomic DNA12316L,14P,41T,71D,83L,91P,96I,116A,120G,123A,128D,148S,154K,169F,178T,180D,187D,203R,208G,225S
JQ8981991444China2009genomic DNA12316L,14P,31S,71D,83L,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
JQ8982001446China2009genomic DNA12316L,27I,41T,71D,83L,91V,92P,116A,120G,124V,128D,148V,149C,154K,169F,178T,187D,203R,204G,208G
JQ8982011452China2009genomic DNA12316L,14P,27I,41T,71D,83I,91P,116A,120S,124V,128D,169F,178T,187D,203R,208G,225S
JQ898162151China2009genomic DNA12316L,14P,71D,83L,91V,116A,120S,124V,128D,154K,169F,171C,178T,180D,187D,208G,210S,211I,225S
JQ898163154China2009genomic DNA12316L,14P,27I,41T,71D,83L,91V,116A,124V,128D,148V,169F,178T,180D,187D,203R,208G,225S
JQ898164156China2009genomic DNA12316L,14P,71D,83L,116A,120G,124V,128D,136M,148I,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
JQ898165162China2009genomic DNA12316L,68I,71D,83L,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
JQ898166177China2009genomic DNA12316L,15L,41T,71D,83L,87Q,91V,115V,116A,120S,124V,149C,154K,169F,171V,180D,187D,203R,208G,210S,225S
JQ8982022314China2009genomic DNA12316L,14P,83L,91V,116A,128D,148S,180D,225S,230I
JQ8982032315China2009genomic DNA12316L,14P,41T,83L,86A,87Q,91L,98D,180D,203R,208G,225S
JQ8982042316China2009genomic DNA12316L,14P,41T,71D,83L,86I,91V,116A,120S,124V,128D,169F,178T,180D,203R,210S,225S
JQ8982052325China2009genomic DNA12316L,14P,27I,41T,71D,83L,91V,116A,120G,124V,128D,148I,154K,169F,178T,180D,187D,203R,210S,225S
JQ8982062326China2009genomic DNA12316L,15L,41T,83L,91V,148S,154K,180D,208P,225S,230I
JQ8982072327China2009genomic DNA12316L,14P,15L,41T,83L,86A,87Q,91V,120S,160S,180D,210S,225S
JQ8982082331China2009genomic DNA12316A,14P,15L,31G,33N,54M,58I,83I,87HQ,92P,96IM,120S,148V,178T,200S,207T,208G,225S
JQ8982092342China2009genomic DNA12316L,14P,41T,71D,83L,91V,96V,120S,154K,169F,178T,180D,187D,203R,208G,225S
JQ8982102344China2009genomic DNA12316L,14P,83L,87Q,91V,96I,116A,180D,208G,225S
JQ8982112345China2009genomic DNA12316L,14P,71D,83L,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
JQ8982122346China2009genomic DNA12316L,27I,41T,71D,83L,116A,120GS,124V,128D,148V,169F,171C,178T,180D,187D,203R,210S,225S
JQ8982132347China2009genomic DNA12316L,68I,71D,83L,91N,92P,93V,116A,120S,121NT,124V,128D,154K,169F,178T,180D,187D,191I,203R,208G,210S,211I,225S
JQ8982142349China2009genomic DNA12316A,11IV,14P,15V,31G,33N,54V,58I,61E,72A,83T,86I,92P,120S,128D,146R,148V,154K,178T,200A,207T,208G,225S
JQ8982152360China2009genomic DNA12316L,14P,15L,41T,71D,83L,86A,87Q,91V,124V,169F,171C,178T,180D,203R,210S,225S,230I
JQ8982162403China2009genomic DNA12316L,14P,27I,41T,71D,83L,91N,96L,107A,116A,120S,124V,128D,148V,154K,169F,171A,178T,180D,200S,225S
JQ8982172494China2009genomic DNA12316L,14P,41T,71D,72A,83T,91V,116A,120A,124V,169F,178T,180D,187D,203R,208G,225S
JQ8982182495China2009genomic DNA12316L,14P,41T,71D,83L,91N,92P,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
JQ8982192643China2009genomic DNA12316L,14P,15M,44A,71D,83L,91IN,169F,178T,180D,203R,208G,225S
JQ8982202703China2009genomic DNA12316A,11A,14P,15L,31G,33N,54M,58I,92P,120S,123A,148V,178T,200S,207T,208G,225S
JQ898167502China2009genomic DNA12316L,14P,68I,71D,83L,91V,120S,123A,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I
JQ898168506China2009genomic DNA123114P,68I,71D,83L,86I,91V,116A,120A,123A,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
JQ898169518China2009genomic DNA12316L,14P,15L,41T,71D,83L,91P,120S,154K,169F,178T,180D,187D,203R,208G,225S
JQ898170523China2009genomic DNA12316L,14P,15L,31S,41T,71D,83L,91LV,120S,154KR,169F,178T,180D,187D,203R,208EG,225S
JQ898171568China2009genomic DNA12316L,14P,71D,83L,116A,120S,124V,128D,148S,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
JQ898172580China2009genomic DNA12316V,14P,41T,71D,87Q,91V,120S,154K,169F,178T,180D,187D,203R,208G,210S,225S
JQ898173612China2009genomic DNA12316L,15L,27I,36I,41T,71D,83L,86A,87Q,91V,96I,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,210S,225S
JQ898174614China2009genomic DNA12316L,14P,15L,41T,71D,83L,91V,110ST,120S,154K,169F,178T,180D,187D,203R,208G,210S,225S
JQ898175639China2009genomic DNA12316L,11I,14P,41T,68I,71D,83L,91N,116A,120A,123A,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
JQ898176647China2009genomic DNA12316L,14P,15L,41T,71D,83L,91V,98D,110N,120S,154K,169F,178T,180D,187D,203R,208G,225S
JQ898177683China2009genomic DNA12316L,14S,68I,71D,72V,83L,86I,91V,116A,120A,124V,128D,136M,154K,169F,178T,180D,187D,203R,208G,210S,211I
JQ898178694China2009genomic DNA12316L,14P,71D,83L,91V,110S,116A,120G,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
JQ898179712China2009genomic DNA12316F,14P,68I,71D,83L,91V,110NT,116A,120S,124V,128D,136LM,154K,162K,180D,187D,208G,210S,211I,225S
JQ898180721China2009genomic DNA12316L,14P,15IL,41T,71D,75D,79D,83L,120S,169F,178T,180D,187D,203R,208G,225S
JQ898181728China2009genomic DNA12316L,14P,71D,83L,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,211I,225S
JQ898182744China2009genomic DNA12316L,14P,71D,83L,91V,110N,116A,120G,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
JQ898183758China2009genomic DNA12316L,14P,15IL,71D,83L,91V,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
JQ898185778China2009genomic DNA12316L,14P,41T,71D,83L,91V,96V,120S,154K,169F,178T,180D,187D,203R,210S,225S
JQ898184792China2009genomic DNA12316A,14P,31G,33N,54M,58I,92P,120G,123A,128D,148V,178T,191I,200A,207T,208G,210S,225S
JQ898186801China2009genomic DNA12316A,11T,14S,15L,31G,33N,54M,58I,83T,86I,92P,115V,120S,123S,128D,148V,154K,178T,200S,207T,208G,225S
JQ898187803China2009genomic DNA123114P,27I,41T,71D,83L,91P,116A,120S,124V,128D,148V,169F,178T,180D,203R,208G
JQ898188813China2009genomic DNA12316L,14P,71D,83LV,91P,116A,120S,121NT,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
JQ898189814China2009genomic DNA12316L,14P,71D,83L,91V,110N,116A,120G,124V,128D,154K,169F,178AT,180D,186I,187D,203R,208G,210S,211I,225S
JQ898190816China2009genomic DNA12316L,14P,68I,71D,72V,83L,91V,116A,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
JQ898191818China2009genomic DNA12316L,14P,44A,68I,71D,83L,91V,110S,116A,120GS,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
JQ898192822China2009genomic DNA12316L,14P,31S,71D,83L,86I,91V,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
JQ898193823China2009genomic DNA12316L,14P,71D,83LV,91V,116A,120G,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S

Database

Resources

Team