<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Kelentse (2021) Direct Submission Submitted (18-NOV-2020) Research Laboratory, Botsw 2.97e-162 33 16 Mixed Plasma; CSF Direct PCR Miscellaneous

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
MW2804091057PLASMABotswana31-Mar-2015genomic DNAsubtype: C12316L,15L,27I,41T,71D,77G,83L,86AP,87Q,91V,96I,116T,120S,128D,148V,169F,178T,199R,208G,210N
MW2804371121CSFBotswana21-Mar-2016genomic DNAsubtype: C12316A,11I,27I,41T,50S,71D,91A,116A,120S,124V,131R,135V,148V,154K,169F,178T,180D,187D,203R,208G,225S
MW2804381121PLASMABotswana21-Mar-2016genomic DNAsubtype: C12316A,11I,27I,41T,50S,71D,91A,116A,120S,124V,131R,135V,148V,154K,169F,178T,180D,187D,203R,208G,225S
MW2804291134CSFBotswana08-Jun-2016genomic DNAsubtype: C12316L,27I,36I,41T,51DN,71D,83L,87Q,91V,94GS,96LM,116A,120A,123V,128D,148V,156GR,169F,178T,183H,184*,203R,206GR,208EG,213EK,218CY,229KR
MW2804301134PLASMABotswana08-Jun-2016genomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,87Q,91V,96L,116A,120A,123V,128D,148V,169F,178T,183H,203R,208G
MW2804221222CSFBotswana24-May-2016genomic DNAsubtype: C12316L,27I,41T,75D,83L,91V,116A,120S,128D,148V,154K,169F,171V,177S,187D,208G,225S
MW2804231222PLASMABotswana24-May-2016genomic DNAsubtype: C12316L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,177S,187D,203R,208G,225S
MW2804201255CSFBotswana15-May-2016genomic DNAsubtype: C12316L,15ILM,27I,41T,71D,83AITV,91V,107ST,116A,120S,124V,148V,169F,178T,180D,187D,203KR,208G,214IM,225S
MW2804171310PLASMABotswana06-Apr-2016genomic DNAsubtype: C12316L,15IL,41T,50AT,71D,83L,116A,120S,128D,136LM,148V,169F,178T,187D,203R,204G,208G
MW2804271313CSFBotswana13-Aug-2016genomic DNAsubtype: C12316L,15L,41T,71D,83L,91V,116N,120S,148V,154K,169F,178T,180D,183G,187D,191IV,203R,207PQ,208G,225S
MW2804281313PLASMABotswana13-Aug-2016genomic DNAsubtype: C12316L,15L,41T,71D,83L,91V,116N,120S,148V,154K,169F,180D,183G,187D,203R,208G,225S
MW2804241326CSFBotswana09-Jun-2016genomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,86A,87Q,91V,96V,98D,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MW2804251326PLASMABotswana09-Jun-2016genomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,86A,87Q,91V,96V,98DE,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MW2804361352PLASMABotswana09-Jan-2016genomic DNAsubtype: C12316L,27I,41T,71D,83L,91IV,116T,120S,124V,128D,148V,169F,178T,180D,203R,208G,210S,230I
MW2804311355PLASMABotswana09-Apr-2015genomic DNAsubtype: C12316A,14S,27I,41T,50*PQS,71D,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MW2804121362PLASMABotswana28-Jan-2016genomic DNAsubtype: C12316L,15L,41T,71D,83T,91N,92P,116A,120A,148V,154K,169F,178T,180D,187D,195NT,203R,208G,210S,211I
MW2804331374CSFBotswana17-Oct-2015genomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,86P,87Q,91Y,92P,110N,116A,120S,124V,128D,148V,169F,178T,180D,203R,208G,210S,225GS
MW2804101452PLASMABotswana26-Oct-2015genomic DNAsubtype: C12316L,14N,15L,31G,33N,41T,71D,83L,91V,116A,118I,148V,154K,169F,178T,180D,187D,200N,203R,208G,225A
MW2804341473CSFBotswana05-Nov-2015genomic DNAsubtype: C12316L,15L,27I,33N,36I,41T,71D,75D,83L,91V,96I,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MW2804351473PLASMABotswana05-Nov-2015genomic DNAsubtype: C12316L,15L,27I,33N,36I,41T,71D,75D,83L,91V,96I,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MW2804261496PLASMABotswana12-Jul-2016genomic DNAsubtype: C12316L,15L,27I,41T,50KPQT,71D,83L,91N,92P,112A,116A,120S,128D,148V,154K,169F,171V,178T,180D,187D,191IV,207S,208G,225S
MW2804051500PLASMABotswana21-Jan-2015genomic DNAsubtype: C12316L,15L,27I,65AP,71D,83L,91V,111P,115L,116A,120S,128D,148V,154K,160S,169F,178ST,183DGNS,187D,191IV,203R,208G,210S,225GS,230IV
MW2804191527PLASMABotswana20-Apr-2016genomic DNAsubtype: C12316F,27I,41T,71D,83L,87Q,91V,92PQ,93A,115V,116A,120G,123A,124V,128D,148V,154K,169F,177S,187D,207PS,208G
MW2804211724PLASMABotswana16-May-2016genomic DNAsubtype: C12313MV,4HQ,6V,27I,41T,71D,83L,91V,96Y,116A,120A,124V,128D,148V,154KR,169F,178T,180D,203R,208G,225S
MW2804111730PLASMABotswana12-Nov-2015genomic DNAsubtype: C12316A,14S,27I,41T,71D,75D,83L,86I,91V,96L,115V,116A,120A,128D,148V,154K,169F,178T,187D,200N,203R,208G,225S
MW2804321748PLASMABotswana07-Jul-2015genomic DNAsubtype: C12316L,27I,71D,75DE,83I,91V,116A,120GS,128D,148V,154K,169F,170KR,171AITV,177AS,178T,187D,203R,208G,210S,225S
MW2804391801PLASMABotswana07-Jun-2016genomic DNAsubtype: C12312V,6L,15H,26A,27I,41T,71D,83L,96I,116A,148V,169F,178T,203R,208G,210N
MW2804181862CSFBotswana18-Apr-2016genomic DNAsubtype: C12316L,15L,27I,41T,71D,86P,87Q,91V,96I,116T,148V,154K,169F,178T,187D,199R,200N,208G,210S,225S
MW2804071884CSFBotswana27-Mar-2015genomic DNAsubtype: C12316L,15L,27I,41T,50A,71D,83T,91V,116A,122Q,122Q_N,128D,135V,148V,154K,160S,169F,171V,178T,187D,208G,210S,225S
MW2804141925CSFBotswana18-Mar-2016genomic DNAsubtype: C12316A,41T,50H,56F,71D,83L,87Q,91V,120S,148V,154K,160PS,169F,178T,187D,200HN,207Q,208G
MW2804151925PLASMABotswana18-Mar-2016genomic DNAsubtype: C12316A,41T,50H,56F,71D,83L,87Q,91V,120S,148V,154K,169F,178T,187D,200H,207Q,208G
MW2804131930CSFBotswana14-Mar-2016genomic DNAsubtype: C12316A,14T,15L,27I,41T,68I,71D,78V,83L,86A,87Q,91V,115IV,116E,120S,128D,148V,169F,171A,178T,183H,187D,204G,208G,216I
MW2804061972PLASMABotswana19-Mar-2015genomic DNAsubtype: C12316L,14PS,15L,41T,50S,54S,58A,71D,83L,91V,96IV,116T,120S,128D,148V,154K,160PS,169F,178ST,180D,187D,203R,208G

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