<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb
#PtsARTSourceCloningStudyType
Gondim (2021) Heightened resistance to host type 1 interferons characterizes HIV-1 at transmission and after antiretroviral therapy interruption Sci Transl Med 13 (576), eabd8179 (2021) 2.68e-155 252 25 Mixed Plasma; PBMC; QVOA Direct PCR; SGS Reservoir

Download sequences

AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
MT929372004.REB.4D1genomic RNAsubtype: B(100.0%)12316M,15L,27I,31N,44A,83L,112A,115V,116A,120G,123A,148V,154K,178T,225A
MT929373004.REB.4D4genomic RNAsubtype: B(100.0%)12316M,15L,27I,31N,44A,83L,112A,115V,116A,120G,123A,148V,154K,178T,225A
MT929374004.REB.4E6genomic RNAsubtype: B(100.0%)12316M,15L,27I,31N,44A,83L,112A,115V,116A,120G,123A,148V,154K,178T,225A
MT929375030.REB.2E1genomic RNAsubtype: B(100.0%)123183L,86A,87Q,91V,96V,116A,120H,148S,154K
MT929376030.REB.3E1genomic RNAsubtype: B(100.0%)123183L,86A,87Q,91V,96V,116A,120H,148S,154K
MT929377030.REB.4E1genomic RNAsubtype: B(100.0%)123183L,86A,87Q,91V,96V,116A,120H,148S,154K
MT929378030.REB.8E1genomic RNAsubtype: B(100.0%)123183L,86A,87Q,91V,96V,116A,120H,148S,154K,208AG
MT929379044.REB.5F1genomic RNAsubtype: A1(0.1%),B(97.2%),C(0.3%),D(2.4%)12316L,14S,15L,27I,29D,41T,83M,86P,87Q,91L,96L,98D,110S,116N,120G,148V,180D,208G,210S,225S
MT929380044.REB.6F1genomic RNAsubtype: A1(0.1%),B(97.2%),C(0.3%),D(2.5%)12316L,14P,15L,27I,29D,41T,83M,86P,87Q,91L,96L,98D,110N,116N,120G,148V,180D,208G,210S,225S
MT929381044.REB.7F1genomic RNAsubtype: A1(0.1%),B(97.2%),C(0.3%),D(2.4%)12316L,14PS,15L,27I,29D,41T,83M,86P,87Q,91L,96L,98D,110NS,116N,120G,148V,180D,208G,210S,225S
MT929382044.REB.8F1genomic RNAsubtype: A1(0.1%),B(97.3%),C(0.3%),D(2.3%)12316L,14S,15L,27I,29D,41T,83M,86P,87Q,91L,96L,98D,110S,116N,120G,148V,180D,208G,210S,225S
MT929383601.REB.4A7genomic RNAsubtype: B(100.0%)12316L,14P,83M,128D,154K,171V,180D
MT929384601.REB.4A8genomic RNAsubtype: B(100.0%)12316L,14P,83M,128D,154K,171V,180D
MT929385601.REB.4B4genomic RNAsubtype: B(100.0%)12316L,14P,83M,128D,154K,171V,180D
MT929386601.REB.4B7genomic RNAsubtype: B(100.0%)12316L,14P,83M,128D,154K,171V,180D
MT929387601.REB.4C1genomic RNAsubtype: B(100.0%)12316L,14P,83M,128D,154K,171V,180D
MT929388601.REB.4C3genomic RNAsubtype: B(100.0%)12316L,14P,83M,128D,154K,171V,180D
MT9293899241.REB.7D4genomic RNAsubtype: B(100.0%)12316H,12Y,15L,83L,120H,136M,148I,225S
MT9293909242.REB.13B1genomic RNAsubtype: B(100.0%)12316L,72V,83L,120H,154K,178T
MT9293919242.REB.13B8genomic RNAsubtype: B(100.0%)12316L,72V,83L,120H,154K,178T
MT9293929242.REB.6A7genomic RNAsubtype: B(100.0%)12316L,72V,83L,120H,154K,178T
MT9293939242.REB.6B2genomic RNAsubtype: B(100.0%)12316L,72V,83L,120H,154K,178T
MT9293949242.REB.6B8genomic RNAsubtype: B(100.0%)12316L,72V,83L,120H,154K,178T
MT9293959243.REB.13F7genomic RNAsubtype: B(100.0%)12316L,14P,27I,75D,83L,148V,180D
MT9293969244.REB.7A1genomic RNAsubtype: B(100.0%)12316M,83L
MT9293979244.REB.7A8genomic RNAsubtype: B(100.0%)12316M,83L
MT9293989244.REB.7C1genomic RNAsubtype: B(100.0%)12316M,83L
MT9293999244.REB.9D3genomic RNAsubtype: B(100.0%)12316M,83L
MT9294009244.REB.9E6genomic RNAsubtype: B(100.0%)12316M,83L
MT929416A08.QVOA.M1genomic RNAsubtype: B(100.0%)12316L,83L,91V,136M,208G
MT929417A08.REB.1A3genomic RNAsubtype: B(100.0%)12316L,83L,91V,136M,208G
MT929418A08.REB.1A5genomic RNAsubtype: B(100.0%)12316L,83L,91V,136M,208G
MT929419A08.REB.1D1genomic RNAsubtype: B(100.0%)12316L,83L,91V,136M,208G
MT929420A08.REB.2F4genomic RNAsubtype: B(100.0%)12316L,83L,91V,136M,208G
MT929422A08.REB.5D2genomic RNAsubtype: B(100.0%)12316L,83L,91V,136M,208G
MT929423A08.REB.6B3genomic RNAsubtype: B(100.0%)12316L,83L,91V,136M,208G
MT929425A08.REB.6D6genomic RNAsubtype: B(100.0%)12316L,83L,91V,136M,208G
MT929427A08.REB.7C1genomic RNAsubtype: B(100.0%)12316L,83L,91V,136M,208G
MT929429A08.REB.7D3genomic RNAsubtype: B(100.0%)12316L,83L,91V,121IN,136M,208G
MT929430A08.REB.8A5genomic RNAsubtype: B(100.0%)12316L,83L,91V,136M,208G
MT929435A09.REB.1A2genomic RNAsubtype: B(99.9%),D(0.1%)12316L,44A,83L,116A,120G,123A,148V,180D
MT794040MM23.01.11A3United Kingdom2002MM23.PLAS.ISO.00009.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,83L,91A,107S,120S
MT794041MM23.01.11A6United Kingdom2002MM23.PLAS.ISO.00009.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,83L,91A,107S,120S
MT794042MM23.01.11B5United Kingdom2002MM23.PLAS.ISO.00009.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,83L,91A,107S,120S
MT794043MM23.01.11C4United Kingdom2002MM23.PLAS.ISO.00009.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,83L,91A,107S,120S
MT794044MM23.01.13A4United Kingdom2002MM23.PLAS.ISO.00009.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,83L,91A,107S,120S
MT794045MM23.01.13A5United Kingdom2002MM23.PLAS.ISO.00009.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,83L,91A,107S,120S
MT794046MM23.01.13B3United Kingdom2002MM23.PLAS.ISO.00009.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,83L,91A,107S,120S
MT794047MM23.01.13C2United Kingdom2002MM23.PLAS.ISO.00009.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,83L,91A,107S,120S
MT794048MM23.01.13D2United Kingdom2002MM23.PLAS.ISO.00009.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,83L,91A,107S,120S
MT794049MM23.01.14D5United Kingdom2002MM23.PLAS.ISO.00009.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,83L,91A,107S,120S
MT794050MM23.01.2A3United Kingdom2002MM23.PLAS.ISO.00009.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,83L,91A,107S,120S
MT794051MM23.01.2C2United Kingdom2002MM23.PLAS.ISO.00009.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,83L,91A,92T,107S,120S
MT794052MM23.05.14B3United Kingdom2002MM23.PLAS.ISO.00064.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,83L,91A,107S,120S
MT794053MM23.05.14C3United Kingdom2002MM23.PLAS.ISO.00064.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,83L,91A,107S,120S
MT794054MM23.05.14D2United Kingdom2002MM23.PLAS.ISO.00064.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,83L,91A,107S,120S
MT794055MM23.05.2C1United Kingdom2002MM23.PLAS.ISO.00064.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,83L,91A,107S,120S
MT794056MM23.07.1C3United Kingdom2002MM23.PLAS.ISO.00204.genomic RNAsubtype: B(100.0%)12316L,15M,27I,83L,86A,87Q,91V,96L,120H,178T
MT794057MM23.07.2A2United Kingdom2002MM23.PLAS.ISO.00204.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,33N,83L,91A,107S,120S
MT794058MM23.07.2A4United Kingdom2002MM23.PLAS.ISO.00204.genomic RNAsubtype: B(100.0%)12316L,15M,27I,83L,86A,87Q,91V,96L,120H,178T
MT794059MM23.07.2A6United Kingdom2002MM23.PLAS.ISO.00204.genomic RNAsubtype: B(100.0%)12316L,15M,27I,83L,86A,87Q,91V,96L,120H,178T
MT794060MM23.07.2B2United Kingdom2002MM23.PLAS.ISO.00204.genomic RNAsubtype: B(99.3%),C(0.7%)12316L,33N,83L,91A,107S,120S
MT794061MM23.07.2B3United Kingdom2002MM23.PLAS.ISO.00204.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,83L,91A,107S,120S,183T
MT794062MM23.07.2B5United Kingdom2002MM23.PLAS.ISO.00204.genomic RNAsubtype: B(100.0%)12316L,15M,27I,83L,86A,87Q,91V,96L,120H,178T
MT794063MM23.07.2C6United Kingdom2002MM23.PLAS.ISO.00204.genomic RNAsubtype: B(100.0%)12316L,15M,27I,83L,86A,87Q,91V,96L,120H,178T
MT794064MM23.08.13C6United Kingdom2003MM23.PLAS.ISO.00316.genomic RNAsubtype: B(100.0%)12316L,33N,83L,91A,107S,120S
MT794067MM23.08.21B6United Kingdom2003MM23.PLAS.ISO.00316.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,33N,83L,91A,107S,120S
MT794068MM23.08.21C2United Kingdom2003MM23.PLAS.ISO.00316.genomic RNAsubtype: B(100.0%)12316L,33N,83L,91A,107S,120S
MT794069MM23.08.22A3United Kingdom2003MM23.PLAS.ISO.00316.genomic RNAsubtype: B(99.8%),C(0.2%)12316L,33N,83L,91A,107S,120S
MT794070MM23.08.22B4United Kingdom2003MM23.PLAS.ISO.00316.genomic RNAsubtype: B(99.8%),C(0.2%)12316L,33N,83L,91A,107S,120S,160S
MT794071MM23.08.22B5United Kingdom2003MM23.PLAS.ISO.00316.genomic RNAsubtype: B(100.0%)12316L,33N,83L,91A,107S,120S
MT794072MM23.08.22C6United Kingdom2003MM23.PLAS.ISO.00316.genomic RNAsubtype: B(100.0%)12316L,33N,83L,91A,107S,120S
MT794075MM23.11.1A1United Kingdom2004MM23.PLAS.ISO.00722.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,83L,91A,107S,120S,183T
MT794076MM23.11.1A5United Kingdom2004MM23.PLAS.ISO.00722.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,33N,83L,91A,107A,120S,183T
MT794077MM23.11.1C3United Kingdom2004MM23.PLAS.ISO.00722.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,33N,83L,91A,107A,120S,183T
MT794078MM23.11.1D3United Kingdom2004MM23.PLAS.ISO.00722.genomic RNAsubtype: B(100.0%)12316L,83L,91A,107S,120S,183T
MT794079MM23.11.1D4United Kingdom2004MM23.PLAS.ISO.00722.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,33N,83L,91A,107A,120S,183T
MT794080MM23.11.1D6United Kingdom2004MM23.PLAS.ISO.00722.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,33N,83L,91A,107A,120S,183T
MT794081MM23.11.2B2United Kingdom2004MM23.PLAS.ISO.00722.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,33N,83L,91A,107A,120S,183T
MT794082MM23.11.2B3United Kingdom2004MM23.PLAS.ISO.00722.genomic RNAsubtype: B(99.6%),C(0.4%)12316L,33N,83L,91A,107A,120S,183T
MT794083MM23.11.2C2United Kingdom2004MM23.PLAS.ISO.00722.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,33N,83L,91A,107A,120S,183T
MT794084MM23.12.21B1United Kingdom2005MM23.PLAS.ISO.01065.genomic RNAsubtype: B(99.3%),C(0.7%)12316L,33N,83L,91A,107A,120S,183T
MT794085MM23.12.22A3United Kingdom2005MM23.PLAS.ISO.01065.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,33N,83L,91A,107A,120S,183T
MT794086MM23.12.22C1United Kingdom2005MM23.PLAS.ISO.01065.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,33N,83L,91A,107A,120S,183T
MT794087MM23.12.22C6United Kingdom2005MM23.PLAS.ISO.01065.genomic RNAsubtype: B(99.3%),C(0.7%)12316L,33N,83L,91A,107A,120S,183T
MT794089MM23.13.1B4United Kingdom2006MM23.PLAS.ISO.01534.genomic RNAsubtype: B(99.4%),C(0.6%)12316L,33N,83L,91A,107A,120S,183T
MT794090MM23.13.21A3United Kingdom2006MM23.PLAS.ISO.01534.genomic RNAsubtype: B(99.6%),C(0.4%)12316L,33N,83L,91A,107A,120S,183T
MT794091MM23.13.21B5United Kingdom2006MM23.PLAS.ISO.01534.genomic RNAsubtype: B(100.0%),C(0.0%)12316L,33N,83L,91A,107A,120S,183T
MT794092MM23.13.21B6United Kingdom2006MM23.PLAS.ISO.01534.genomic RNAsubtype: B(100.0%)12316L,83L,91A,107S,120S,183T
MT794093MM23.13.21D4United Kingdom2006MM23.PLAS.ISO.01534.genomic RNAsubtype: B(100.0%)12316L,33N,83L,91A,107A,120S,183T
MT794094MM23.13.22B3United Kingdom2006MM23.PLAS.ISO.01534.genomic RNAsubtype: B(100.0%)12316L,83L,91A,107S,120S,183T
MT794095MM23.13.22C5United Kingdom2006MM23.PLAS.ISO.01534.genomic RNAsubtype: B(100.0%)12316L,83L,91A,107S,120S,183T
MT794096MM23.13.2D1United Kingdom2006MM23.PLAS.ISO.01534.genomic RNAsubtype: B(100.0%)12316L,33N,83L,91A,107A,120S,183T
MT794005MM23.18.1A1.QVOAUnited Kingdom2009MM23.PBMC.QVOA.02738genomic RNAsubtype: B(99.6%),C(0.4%)12316L,33N,83L,91A,107A,120S,183T
MT794006MM23.18.2A1.QVOAUnited Kingdom2009MM23.PBMC.QVOA.02738genomic RNAsubtype: B(99.6%),C(0.4%)12316L,33N,83L,91A,107A,120S,183T
MT794190MM33.01.13C1United Kingdom2003MM33.PLAS.ISO.00012.genomic RNAsubtype: B(100.0%)12316L,83L,91V,120S,128D,132Q,136M
MT794191MM33.01.14C4United Kingdom2003MM33.PLAS.ISO.00012.genomic RNAsubtype: B(100.0%)12316L,83L,91V,120S,128D,132Q,136M
MT794192MM33.01.16A5United Kingdom2003MM33.PLAS.ISO.00012.genomic RNAsubtype: B(100.0%)12316L,83L,91V,120S,128D,132Q,136M
MT794193MM33.01.16C3United Kingdom2003MM33.PLAS.ISO.00012.genomic RNAsubtype: B(100.0%)12316L,83L,91V,120S,128D,132Q,136M
MT794194MM33.01.18A5United Kingdom2003MM33.PLAS.ISO.00012.genomic RNAsubtype: B(100.0%)12316L,83L,91V,120S,128D,132Q,136M
MT794195MM33.01.19C4United Kingdom2003MM33.PLAS.ISO.00012.genomic RNAsubtype: B(100.0%)12316L,83L,91V,120S,128D,132Q,136M
MT794196MM33.01.1C1United Kingdom2003MM33.PLAS.ISO.00012.genomic RNAsubtype: B(100.0%)12316L,83L,91V,120S,128D,132Q,136M
MT794197MM33.01.20D1United Kingdom2003MM33.PLAS.ISO.00012.genomic RNAsubtype: B(100.0%)12316L,83L,91V,120S,128D,132Q,136M
MT794198MM33.07.1A2United Kingdom2003MM33.PLAS.ISO.00096.genomic RNAsubtype: B(100.0%)12316L,83L,91V,120S,128D,132Q,136M
MT794199MM33.07.1B6United Kingdom2003MM33.PLAS.ISO.00096.genomic RNAsubtype: B(100.0%)12316L,83L,91V,120S,128D,132Q,136M
MT794200MM33.07.1D4United Kingdom2003MM33.PLAS.ISO.00096.genomic RNAsubtype: B(100.0%)12316L,83L,91V,120S,128D,132Q,136M
MT794201MM33.07.2D2United Kingdom2003MM33.PLAS.ISO.00096.genomic RNAsubtype: B(100.0%)12316L,83L,91V,120S,128D,132Q,136M
MT794202MM33.08.1A2United Kingdom2004MM33.PLAS.ISO.00201.genomic RNAsubtype: B(100.0%)12316L,83L,91V,120S,128D,132Q,136M
MT794203MM33.08.1A3United Kingdom2004MM33.PLAS.ISO.00201.genomic RNAsubtype: B(100.0%)12316L,83L,91V,120S,128D,132Q,136M
MT794204MM33.08.1A4United Kingdom2004MM33.PLAS.ISO.00201.genomic RNAsubtype: B(100.0%)12316L,83L,91V,120S,128D,132Q,136M
MT794205MM33.08.1D2United Kingdom2004MM33.PLAS.ISO.00201.genomic RNAsubtype: B(100.0%)12316L,83L,91V,120S,128D,132Q,136M
MT794206MM33.08.1D4United Kingdom2004MM33.PLAS.ISO.00201.genomic RNAsubtype: B(100.0%)12316L,83L,91V,120S,128D,132Q,136M
MT794207MM33.08.1D5United Kingdom2004MM33.PLAS.ISO.00201.genomic RNAsubtype: B(100.0%)12316L,83L,91V,120S,128D,132Q,136M
MT794208MM33.08.2A3United Kingdom2004MM33.PLAS.ISO.00201.genomic RNAsubtype: B(100.0%)12316L,83L,91V,120S,128D,132Q,136M
MT794209MM33.08.2B6United Kingdom2004MM33.PLAS.ISO.00201.genomic RNAsubtype: B(100.0%)12316L,83L,91V,120S,128D,132Q,136M
MT794210MM33.13.11B1United Kingdom2005MM33.PLAS.ISO.00719.genomic RNAsubtype: B(100.0%)12316L,83L,91V,115V,120S,128D,132Q,136M
MT794211MM33.13.11B5United Kingdom2005MM33.PLAS.ISO.00719.genomic RNAsubtype: B(100.0%)12316L,83L,91V,115V,120S,128D,132Q,136M
MT794212MM33.13.12A4United Kingdom2005MM33.PLAS.ISO.00719.genomic RNAsubtype: B(100.0%)12316L,83L,91V,115V,120S,128D,132Q,136M
MT794214MM33.13.1D6United Kingdom2005MM33.PLAS.ISO.00719.genomic RNAsubtype: B(100.0%)12316L,83L,91V,115V,120S,128D,132Q,136M
MT794216MM33.13.2D6United Kingdom2005MM33.PLAS.ISO.00719.genomic RNAsubtype: B(100.0%)12316L,83L,91V,115V,120S,128D,132Q,136M
MT794217MM33.14.11A3United Kingdom2006MM33.PLAS.ISO.01006.genomic RNAsubtype: B(100.0%)12316L,83L,91V,115V,120S,128D,132Q,136M,148I
MT794218MM33.14.11B1United Kingdom2006MM33.PLAS.ISO.01006.genomic RNAsubtype: B(100.0%)12316L,83L,91V,115V,120S,128D,132Q,136M
MT794219MM33.14.11B4United Kingdom2006MM33.PLAS.ISO.01006.genomic RNAsubtype: B(100.0%)12316L,83L,91V,115V,120S,128D,132Q,136M
MT794220MM33.14.11C6United Kingdom2006MM33.PLAS.ISO.01006.genomic RNAsubtype: B(100.0%)12316L,27I,83L,91V,115V,120S,128D,132Q,136M,148I
MT794221MM33.14.12A2United Kingdom2006MM33.PLAS.ISO.01006.genomic RNAsubtype: B(100.0%)12316L,83L,91V,115V,120S,128D,132Q,136M
MT794222MM33.14.12C6United Kingdom2006MM33.PLAS.ISO.01006.genomic RNAsubtype: B(100.0%)12316L,83L,91V,115V,120S,128D,132Q,136M
MT794231MM33.17.1D2United Kingdom2008MM33.PLAS.ISO.01721.genomic RNAsubtype: B(100.0%)12316L,83L,91V,115V,120S,136M
MT794224MM33.17.2A4United Kingdom2008MM33.PLAS.ISO.01721.genomic RNAsubtype: B(100.0%)12316L,83L,91V,136M
MT794225MM33.17.2B3United Kingdom2008MM33.PLAS.ISO.01721.genomic RNAsubtype: B(100.0%)12316L,41A,83L,91V,115V,120S,125Q,136M
MT794226MM33.17.2B4United Kingdom2008MM33.PLAS.ISO.01721.genomic RNAsubtype: B(100.0%)12316L,83L,91V,115V,120S,136M,148I
MT794227MM33.17.2B5United Kingdom2008MM33.PLAS.ISO.01721.genomic RNAsubtype: B(100.0%)12316L,41A,83L,91V,115V,120S,125Q,136M,178T
MT794229MM33.17.2D4United Kingdom2008MM33.PLAS.ISO.01721.genomic RNAsubtype: B(100.0%)12316L,83L,91V,115V,120S,136M
MT794232MM33.19.1A2United Kingdom2009MM33.PLAS.ISO.02031.genomic RNAsubtype: B(100.0%)12316L,41A,83L,91V,120S,125Q,136M
MT794233MM33.19.1A4United Kingdom2009MM33.PLAS.ISO.02031.genomic RNAsubtype: B(100.0%)12316L,41A,83L,91V,120S,125Q,136M
MT794234MM33.19.1B1United Kingdom2009MM33.PLAS.ISO.02031.genomic RNAsubtype: B(100.0%)12316L,41A,83L,91V,98D,120S,125Q,136M
MT794235MM33.19.1C2United Kingdom2009MM33.PLAS.ISO.02031.genomic RNAsubtype: B(100.0%)12316L,41A,83L,91V,120S,125Q,136M,178T
MT794236MM33.19.2A4United Kingdom2009MM33.PLAS.ISO.02031.genomic RNAsubtype: B(100.0%)12316L,41A,83L,91V,120S,125Q,136M
MT794237MM33.19.2B1United Kingdom2009MM33.PLAS.ISO.02031.genomic RNAsubtype: B(100.0%)12316L,41A,83L,91V,120S,125Q,136M
MT794238MM33.19.2B5United Kingdom2009MM33.PLAS.ISO.02031.genomic RNAsubtype: B(100.0%)12316L,41A,83L,91V,120S,125Q,136M
MT794239MM33.19.2C1United Kingdom2009MM33.PLAS.ISO.02031.genomic RNAsubtype: B(100.0%)12316M,41A,83L,91V,120S,125Q,136M
MT794240MM33.19.2D2United Kingdom2009MM33.PLAS.ISO.02031.genomic RNAsubtype: B(100.0%)12316L,41A,83L,91V,120S,125Q,136M
MT794241MM33.19.3A1United Kingdom2009MM33.PLAS.ISO.02031.genomic RNAsubtype: B(100.0%)12316L,41A,83L,91V,120S,125Q,136M
MT794242MM33.19.3B4United Kingdom2009MM33.PLAS.ISO.02031.genomic RNAsubtype: B(100.0%)12316L,41A,83L,91V,120S,125Q,136M
MT794243MM33.19.3D2United Kingdom2009MM33.PLAS.ISO.02031.genomic RNAsubtype: B(100.0%)12316L,41A,83L,91V,120S,125Q,136M
MT794244MM33.19.4A5United Kingdom2009MM33.PLAS.ISO.02031.genomic RNAsubtype: B(100.0%)12316L,41A,83L,91V,120S,125Q,136M,178T
MT794245MM33.19.4B5United Kingdom2009MM33.PLAS.ISO.02031.genomic RNAsubtype: B(100.0%)12316L,41A,83L,91V,120S,125Q,136M
MT794246MM33.19.4D1United Kingdom2009MM33.PLAS.ISO.02031.genomic RNAsubtype: B(100.0%)12316L,41A,83L,91V,120S,125Q,136M
MT794621MM34.06.21C6United Kingdom2003MM34.PLAS.ISO.00074.genomic RNAsubtype: B(100.0%)12316L,41A,91T,132K,136M
MT794622MM34.08.11B5United Kingdom2004MM34.PLAS.ISO.00192.genomic RNAsubtype: B(100.0%)12316L,17A,41A,91T,132K,136M,194S
MT794623MM34.08.11C2United Kingdom2004MM34.PLAS.ISO.00192.genomic RNAsubtype: B(100.0%)12316L,17A,41A,91T,132K,136M,194S
MT794624MM34.08.11C3United Kingdom2004MM34.PLAS.ISO.00192.genomic RNAsubtype: B(100.0%)12316L,17A,41A,91T,132K,136M,194S
MT794625MM34.08.11D3United Kingdom2004MM34.PLAS.ISO.00192.genomic RNAsubtype: B(100.0%)12316L,17A,41A,91T,132K,136M,194S
MT794626MM34.08.21A3United Kingdom2004MM34.PLAS.ISO.00192.genomic RNAsubtype: B(100.0%)12316L,17A,41A,91T,132K,136M,194S
MT794627MM34.12.21A1United Kingdom2005MM34.PLAS.ISO.00760.genomic RNAsubtype: B(100.0%),C(0.0%)12316L,14P,41A,83M,132K,136M,194S
MT794628MM34.12.21C5United Kingdom2005MM34.PLAS.ISO.00760.genomic RNAsubtype: B(100.0%)12316L,14P,41A,83M,132K,136M,194S
MT794629MM34.12.21D1United Kingdom2005MM34.PLAS.ISO.00760.genomic RNAsubtype: B(99.5%),C(0.5%)12316L,14P,17A,41A,83M,132K,136M,194S
MT794630MM34.12.21D3United Kingdom2005MM34.PLAS.ISO.00760.genomic RNAsubtype: B(100.0%)12316L,14P,17A,41A,83M,132K,136M,148I,194S
MT794631MM34.13.11A2United Kingdom2006MM34.PLAS.ISO.01007.genomic RNAsubtype: B(100.0%)12316L,14P,17A,41A,132K,136M,194S,225S
MT794632MM34.13.11B1United Kingdom2006MM34.PLAS.ISO.01007.genomic RNAsubtype: B(99.7%),C(0.3%)12316L,14P,17A,41A,132K,136M,194S,225S
MT794633MM34.13.11C5United Kingdom2006MM34.PLAS.ISO.01007.genomic RNAsubtype: B(99.5%),D(0.5%)12316L,14P,17A,41A,132K,136M,148I,194S
MT794634MM34.13.11D2United Kingdom2006MM34.PLAS.ISO.01007.genomic RNAsubtype: B(100.0%)12316L,14P,41A,83M,132K,136M,194S
MT794635MM34.13.11D5United Kingdom2006MM34.PLAS.ISO.01007.genomic RNAsubtype: B(97.8%),C(1.7%),D(0.5%)12316L,14P,41A,83M,132K,136M,194S
MT794636MM34.14.1A4United Kingdom2007MM34.PLAS.ISO.01313.genomic RNAsubtype: B(99.9%),C(0.1%)12316L,14P,41A,83M,132K,136M,194S
MT794637MM34.14.1B2United Kingdom2007MM34.PLAS.ISO.01313.genomic RNAsubtype: B(99.7%),D(0.3%)12316L,14P,41A,83M,132K,136M,194S
MT794638MM34.14.1B3United Kingdom2007MM34.PLAS.ISO.01313.genomic RNAsubtype: B(98.6%),C(1.4%)12316L,14P,41A,83M,132K,136M,194S
MT794639MM34.14.1C6United Kingdom2007MM34.PLAS.ISO.01313.genomic RNAsubtype: B(98.0%),C(1.5%),D(0.5%)12316L,14P,41A,83M,132K,136M,194S
MT794640MM34.14.1D4United Kingdom2007MM34.PLAS.ISO.01313.genomic RNAsubtype: B(99.5%),D(0.5%)12316L,14P,17A,41A,132K,136M,148I,194S
MT794641MM34.14.2A1United Kingdom2007MM34.PLAS.ISO.01313.genomic RNAsubtype: B(99.9%),C(0.1%)12316L,14P,41A,83M,132K,136M,194S
MT794642MM34.14.2B1United Kingdom2007MM34.PLAS.ISO.01313.genomic RNAsubtype: B(100.0%)12316L,14P,41A,83M,132K,136M,194S
MT794643MM34.15.11A1United Kingdom2007MM34.PLAS.ISO.01399.genomic RNAsubtype: B(99.4%),D(0.6%)12316L,14P,41A,83M,132K,136M,194S
MT794644MM34.15.11C1United Kingdom2007MM34.PLAS.ISO.01399.genomic RNAsubtype: B(98.8%),C(0.0%),D(1.2%)12316L,14P,41A,83M,132K,136M,194S
MT794645MM34.15.11D3United Kingdom2007MM34.PLAS.ISO.01399.genomic RNAsubtype: B(100.0%)12316L,14P,41A,83M,97K,132K,136M,194S
MT794647MM34.16.11A5United Kingdom2008MM34.PLAS.ISO.01691.genomic RNAsubtype: B(99.5%),C(0.0%),D(0.5%)12316L,14P,41A,83M,132K,136M,194S
MT794648MM34.16.11C1United Kingdom2008MM34.PLAS.ISO.01691.genomic RNAsubtype: B(98.5%),C(1.5%)12316L,14P,41A,83M,132K,136M,194S
MT794649MM34.16.11C3United Kingdom2008MM34.PLAS.ISO.01691.genomic RNAsubtype: B(99.1%),C(0.3%),D(0.6%)12316L,14P,41A,83M,132K,136M,194S
MT794650MM34.16.11D1United Kingdom2008MM34.PLAS.ISO.01691.genomic RNAsubtype: B(99.4%),D(0.6%)12316L,14P,41A,83M,132K,136M,194S
MT794651MM34.16.11D2United Kingdom2008MM34.PLAS.ISO.01691.genomic RNAsubtype: B(100.0%),D(0.0%)12316L,14P,41A,83M,132K,136M,194S
MT794569MM34.23.1B2.QVOAUnited Kingdom2011MM34.PBMC.QVOA.02911genomic RNAsubtype: B(99.5%),D(0.5%)12316L,14P,41A,83M,132K,136M,194S
MT794570MM34.25.2B5.QVOAUnited Kingdom2012MM34.PBMC.QVOA.03261genomic RNAsubtype: B(100.0%)12316L,14P,41A,83M,132K,136M,194S
MT794571MM34.25.3A5.QVOAUnited Kingdom2012MM34.PBMC.QVOA.03261genomic RNAsubtype: B(100.0%)12316L,14P,41A,83M,132K,136M,194S
MT794802MM39.02.13D3United Kingdom2004MM39.PLAS.ISO.00011.genomic RNAsubtype: B(100.0%)12316L,14P,15L,16T,27I,83I,120S,148V,154K,178T,225S
MT794803MM39.02.13D6United Kingdom2004MM39.PLAS.ISO.00011.genomic RNAsubtype: B(100.0%)12316L,14P,15L,16T,27I,83I,120S,148V,154K,178T,225S
MT794804MM39.02.14C1United Kingdom2004MM39.PLAS.ISO.00011.genomic RNAsubtype: B(100.0%)12316L,14P,15L,16T,27I,83I,120S,148V,154K,178T,225S
MT794805MM39.02.14C3United Kingdom2004MM39.PLAS.ISO.00011.genomic RNAsubtype: B(100.0%)12316L,14P,15L,16T,27I,83I,120S,148V,154K,178T,225S
MT794806MM39.02.14D4United Kingdom2004MM39.PLAS.ISO.00011.genomic RNAsubtype: B(100.0%)12316L,14P,15L,16T,27I,83I,120S,148V,154K,178T,225S
MT794800MM39.02.1B4United Kingdom2004MM39.PLAS.ISO.00011.genomic RNAsubtype: B(100.0%)12316L,14P,15L,16T,27I,83I,120S,148V,154K,178T,225S
MT794801MM39.02.2B5United Kingdom2004MM39.PLAS.ISO.00011.genomic RNAsubtype: B(100.0%)12316L,14P,15L,16T,27I,83I,120S,148V,154K,178T,225S
MT794859MM40.01.1A1United Kingdom2004MM40.PLAS.ISO.00011.genomic RNAsubtype: B(100.0%)123114P,44A,91V,154K
MT794860MM40.01.1A2United Kingdom2004MM40.PLAS.ISO.00011.genomic RNAsubtype: B(100.0%)123114P,44A,91V,154K
MT794861MM40.01.1A4United Kingdom2004MM40.PLAS.ISO.00011.genomic RNAsubtype: B(100.0%)123114P,44A,91V,154K
MT794862MM40.01.1A5United Kingdom2004MM40.PLAS.ISO.00011.genomic RNAsubtype: B(100.0%)123114P,44A,91V,154K
MT794863MM40.01.1A6United Kingdom2004MM40.PLAS.ISO.00011.genomic RNAsubtype: B(100.0%)123114P,44A,91V,154K
MT794864MM40.01.1B1United Kingdom2004MM40.PLAS.ISO.00011.genomic RNAsubtype: B(100.0%)123114P,44A,91V,154K
MT794865MM40.01.1B2United Kingdom2004MM40.PLAS.ISO.00011.genomic RNAsubtype: B(100.0%)123114P,44A,91V,154K
MT794866MM40.01.1B3United Kingdom2004MM40.PLAS.ISO.00011.genomic RNAsubtype: B(100.0%)123114P,44A,91V,154K
MT794867MM40.01.1B4United Kingdom2004MM40.PLAS.ISO.00011.genomic RNAsubtype: B(100.0%)123114P,44A,91V,154K
MT794868MM40.01.1B5United Kingdom2004MM40.PLAS.ISO.00011.genomic RNAsubtype: B(100.0%)123114P,44A,91V,154K
MT794869MM40.01.1C6United Kingdom2004MM40.PLAS.ISO.00011.genomic RNAsubtype: B(100.0%)123114P,44A,91V,154K
MT794870MM40.01.1D1United Kingdom2004MM40.PLAS.ISO.00011.genomic RNAsubtype: B(100.0%)123114P,44A,91V,154K
MT794871MM40.01.2A4United Kingdom2004MM40.PLAS.ISO.00011.genomic RNAsubtype: B(100.0%)123114P,44A,91V,154K
MT794872MM40.01.2B5United Kingdom2004MM40.PLAS.ISO.00011.genomic RNAsubtype: B(100.0%)123114P,44A,91V,154K
MT794873MM40.01.2C2United Kingdom2004MM40.PLAS.ISO.00011.genomic RNAsubtype: B(100.0%)123114P,44A,91V,154K
MT794874MM40.01.2D4United Kingdom2004MM40.PLAS.ISO.00011.genomic RNAsubtype: B(100.0%)123114P,44A,91V,154K
MT794875MM40.01.2D5United Kingdom2004MM40.PLAS.ISO.00011.genomic RNAsubtype: B(100.0%)123114P,44A,91V,154K
MT794879MM40.07.11A3United Kingdom2004MM40.PLAS.ISO.00095.genomic RNAsubtype: B(100.0%)123114P,44A,91V,154K
MT794876MM40.07.11A4United Kingdom2004MM40.PLAS.ISO.00095.genomic RNAsubtype: B(100.0%)123114P,44A,91V,154K
MT794877MM40.07.11B1United Kingdom2004MM40.PLAS.ISO.00095.genomic RNAsubtype: B(100.0%)123114P,44A,91V,154K
MT794880MM40.07.11B3United Kingdom2004MM40.PLAS.ISO.00095.genomic RNAsubtype: B(100.0%)123114P,44A,91V,154K
MT794878MM40.07.11B4United Kingdom2004MM40.PLAS.ISO.00095.genomic RNAsubtype: B(100.0%)123114P,44A,91V,154K
MT794881MM40.07.11B5United Kingdom2004MM40.PLAS.ISO.00095.genomic RNAsubtype: B(100.0%)123114P,44A,91V,154K
MT794882MM40.07.12B1United Kingdom2004MM40.PLAS.ISO.00095.genomic RNAsubtype: B(100.0%)123114P,44A,91V,154K
MT794883MM40.12.13A6United Kingdom2006MM40.PLAS.ISO.00747.genomic RNAsubtype: B(98.5%),C(1.5%)123114P,44A,154K
MT794884MM40.12.13C1United Kingdom2006MM40.PLAS.ISO.00747.genomic RNAsubtype: B(100.0%)123114P,44A,154K
MT794885MM40.12.13D1United Kingdom2006MM40.PLAS.ISO.00747.genomic RNAsubtype: B(100.0%)123114P,44A,154K
MT794886MM40.12.14C5United Kingdom2006MM40.PLAS.ISO.00747.genomic RNAsubtype: B(100.0%)123114P,44A,154K
MT794887MM40.12.14D2United Kingdom2006MM40.PLAS.ISO.00747.genomic RNAsubtype: B(100.0%)123114P,44A,154K
MT794889MM40.13.11A1United Kingdom2007MM40.PLAS.ISO.01166.genomic RNAsubtype: B(97.9%),C(1.6%),D(0.5%)123114P,44A,83L,154K
MT794890MM40.13.11A5United Kingdom2007MM40.PLAS.ISO.01166.genomic RNAsubtype: B(97.0%),C(1.7%),D(1.4%)123114P,44A,83L,154K
MT794891MM40.13.11B3United Kingdom2007MM40.PLAS.ISO.01166.genomic RNAsubtype: B(100.0%)123114P,44A,83L,154K
MT794892MM40.13.11D4United Kingdom2007MM40.PLAS.ISO.01166.genomic RNAsubtype: B(100.0%)123114P,44A,83L,154K
MT794893MM40.13.12A1United Kingdom2007MM40.PLAS.ISO.01166.genomic RNAsubtype: B(97.9%),C(1.6%),D(0.5%)123114P,44A,83L,154K
MT794894MM40.13.12B2United Kingdom2007MM40.PLAS.ISO.01166.genomic RNAsubtype: B(100.0%)123114P,44A,83L,154K
MT794895MM40.13.12B5United Kingdom2007MM40.PLAS.ISO.01166.genomic RNAsubtype: B(100.0%)123114P,44A,83L,154K
MT794896MM40.13.12C2United Kingdom2007MM40.PLAS.ISO.01166.genomic RNAsubtype: B(100.0%)123114P,44A,83L,154K
MT794897MM40.13.12C3United Kingdom2007MM40.PLAS.ISO.01166.genomic RNAsubtype: B(97.9%),C(1.6%),D(0.5%)123114P,44A,83M,154K
MT794888MM40.13.13D5United Kingdom2007MM40.PLAS.ISO.01166.genomic RNAsubtype: B(97.9%),C(1.6%),D(0.5%)123114P,44A,83L,154K
MT794911MM40.15.13B6United Kingdom2008MM40.PLAS.ISO.01530.genomic RNAsubtype: B(97.3%),C(1.5%),D(1.1%)123114P,44A,83L,154K
MT794912MM40.15.14D5United Kingdom2008MM40.PLAS.ISO.01530.genomic RNAsubtype: B(100.0%),D(0.0%)123114P,44A,83M,154K
MT794898MM40.15.1A3United Kingdom2008MM40.PLAS.ISO.01530.genomic RNAsubtype: B(97.7%),C(1.5%),D(0.8%)123114P,44A,83M,154K
MT794899MM40.15.1A5United Kingdom2008MM40.PLAS.ISO.01530.genomic RNAsubtype: B(97.7%),C(1.7%),D(0.5%)123114P,44A,83L,154K
MT794900MM40.15.1B1United Kingdom2008MM40.PLAS.ISO.01530.genomic RNAsubtype: B(97.2%),C(1.6%),D(1.1%)123114P,44A,83L,154K
MT794901MM40.15.1B6United Kingdom2008MM40.PLAS.ISO.01530.genomic RNAsubtype: B(100.0%)123114P,44A,83L,154K
MT794902MM40.15.1C1United Kingdom2008MM40.PLAS.ISO.01530.genomic RNAsubtype: B(100.0%)123114P,44A,83L,154K
MT794903MM40.15.2A2United Kingdom2008MM40.PLAS.ISO.01530.genomic RNAsubtype: B(100.0%)123114P,44A,83L,154K
MT794904MM40.15.2B1United Kingdom2008MM40.PLAS.ISO.01530.genomic RNAsubtype: B(100.0%)123114P,44A,83L,154K
MT794905MM40.15.2B5United Kingdom2008MM40.PLAS.ISO.01530.genomic RNAsubtype: B(100.0%)123114P,44A,83L,154K
MT794906MM40.15.2B6United Kingdom2008MM40.PLAS.ISO.01530.genomic RNAsubtype: B(97.2%),C(1.6%),D(1.2%)123114P,44A,83L,154K
MT794907MM40.15.2C1United Kingdom2008MM40.PLAS.ISO.01530.genomic RNAsubtype: B(99.6%),D(0.4%)123114P,44A,83L,154K
MT794908MM40.15.2C3United Kingdom2008MM40.PLAS.ISO.01530.genomic RNAsubtype: B(100.0%),C(0.0%)123114P,44A,83L,154K
MT794909MM40.15.2D1United Kingdom2008MM40.PLAS.ISO.01530.genomic RNAsubtype: B(100.0%)123114P,44A,154K
MT794910MM40.15.2D6United Kingdom2008MM40.PLAS.ISO.01530.genomic RNAsubtype: B(97.3%),C(1.6%),D(1.1%)123114P,44A,83L,154K
MT929442S22.REB.1E2genomic RNAsubtype: B(100.0%)12316L,15L,27I,41T,83M,91V,110N,120S,148V,180D,208G
MT929443S22.REB.1F5genomic RNAsubtype: B(100.0%)12316L,15L,27I,41T,83M,91V,110N,120S,148V,180D,208G
MT929444S22.REB.24C4genomic RNAsubtype: B(100.0%)12316L,15L,27I,41T,83M,91V,110N,120S,148V,180D,208G
MT929445S22.REB.3A6genomic RNAsubtype: B(100.0%)12316L,15L,27I,41T,83M,91V,110N,120S,148V,180D,208G
MT929446S22.REB.3B6genomic RNAsubtype: B(100.0%)12316L,15L,27I,41T,83M,91V,110N,120S,148V,180D,208G
MT929447S23.REB.24A5genomic RNAsubtype: B(99.1%),C(0.9%)12316L,83L,148I,180D,191I,194S
MT929448S23.REB.3D1genomic RNAsubtype: B(99.1%),C(0.9%)12316L,83L,148I,180D,191I,194S
MT929449S30.REB.2D1genomic RNAsubtype: B(100.0%)12316V,14P,107S,154K
MT929450S30.REB.2D2genomic RNAsubtype: B(100.0%)12316V,14P,107S,154K
MT929451S30.REB.7D1genomic RNAsubtype: B(100.0%)12316V,14P,83L,120H,154K
MT929452S30.REB.8D1genomic RNAsubtype: B(100.0%)12316V,14P,107S,154K