Genbank References: capsid (p24)

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Genbank References: capsid (p24)

Authors	Title	Citation	E-value	# in Gb	#Pts	ART	Source	Cloning	StudyType
Chopera (2016)	Transmission of HIV-1 CTL escape variants provides HLA-mismatched recipients with a survival advantage	PLoS Pathog. 4 (3), E1000033 (2008)	7.9e-165	306	24	Naive	Plasma	SGS	HLA

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Accession	IsolateName	Country	Coll Date	Clone	MolType	Note	FirstAA	LastAA	MutList
EU347643		South Africa	2006		genomic RNA	subtype: C	1	231	6A,27I,41T,71D,83L,87Q,91V,96I,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347676	CAP008_2_00	South Africa	2005		genomic RNA	subtype: C	1	231	6L,27I,31G,33N,41T,71D,83L,91V,115V,120S,128D,148V,154K,160S,169F,178T,187D,200S,203R,208G,225S
EU347677	CAP008_2_03	South Africa	2005		genomic RNA	subtype: C	1	231	6L,27I,31G,33N,41T,71D,83L,115V,128D,148V,154K,160S,169F,178T,187D,200S,203R,208G,225S
EU347678	CAP008_2_05	South Africa	2005		genomic RNA	subtype: C	1	231	6L,27I,31G,33N,41T,71D,83L,115V,128D,148V,154K,160S,169F,178T,187D,200S,203R,208G,225S
EU347679	CAP008_2_06	South Africa	2005		genomic RNA	subtype: C	1	231	6L,27I,31G,33N,41T,44P,71D,83L,115V,128D,148V,154K,160S,169F,178T,187D,200S,203R,208G,225S
EU347680	CAP008_3_10	South Africa	2005		genomic RNA	subtype: C	1	231	6L,27I,31G,33N,41T,71D,83L,115V,128D,140R,148V,154K,160S,169F,178T,187D,200S,203R,208G,225S
EU347681	CAP030_2_00	South Africa	2004		genomic RNA	subtype: C	1	231	27I,41T,48I,71D,83I,91V,96L,116A,124V,128D,148V,154K,169F,171I,178T,187D,203R,204G,207S,208G
EU347682	CAP030_2_04	South Africa	2004		genomic RNA	subtype: C	1	231	27I,41T,71D,83I,91V,96L,116A,124V,128D,148V,154K,169F,171I,178T,187D,203R,204G,207S,208G
EU347683	CAP030_3_10	South Africa	2005		genomic RNA	subtype: C	1	231	27I,41T,71D,83I,91V,96L,116A,124V,128D,148V,154K,169F,171I,178T,187D,203R,204G,207S,208G
EU347684	CAP030_3_16	South Africa	2005		genomic RNA	subtype: C	1	231	27I,41T,71D,83I,91V,96L,116A,124V,128D,148V,154K,169F,171I,178T,187D,203R,204G,207S,208G
EU347635	CAP045_2_00	South Africa	2005		genomic RNA	subtype: C	1	231	6L,14P,15M,27I,41T,56F,71D,83L,87Q,91V,116A,118I,120G,148V,154K,163E,169F,178T,180D,187D,207T,208G,225S
EU347636	CAP045_2_05	South Africa	2005		genomic RNA	subtype: C	1	231	6L,14P,15M,27I,41T,56F,71D,74Y,83L,87Q,91V,116A,118I,120G,148V,154K,163E,169F,178T,180D,187D,207T,208G
EU347637	CAP045_4_19	South Africa	2006		genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,56F,71D,83L,87Q,91V,116A,118I,120G,148V,154K,169F,178T,180D,187D,207T,208G,225S
EU347404	CAP061_2_00	South Africa	2004	02	genomic RNA	subtype: C	1	231	6A,14P,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347405	CAP061_2_00	South Africa	2004	03	genomic RNA	subtype: C	1	231	6A,14P,25T,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347406	CAP061_2_00	South Africa	2004	04	genomic RNA	subtype: C	1	231	6A,14P,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347407	CAP061_2_00	South Africa	2004	05	genomic RNA	subtype: C	1	231	6A,14P,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347408	CAP061_2_00	South Africa	2004	06	genomic RNA	subtype: C	1	231	6A,14P,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347409	CAP061_2_00	South Africa	2004	07	genomic RNA	subtype: C	1	203	6A,14P,15L,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R
EU347410	CAP061_2_00	South Africa	2004	08	genomic RNA	subtype: C	1	231	6A,14P,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347411	CAP061_2_00	South Africa	2004	09	genomic RNA	subtype: C	1	231	6A,14P,15L,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347412	CAP061_2_00	South Africa	2004	10	genomic RNA	subtype: C	1	231	6A,14P,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347413	CAP061_2_00	South Africa	2004	11	genomic RNA	subtype: C	1	231	6A,14P,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347414	CAP061_2_00	South Africa	2004	12	genomic RNA	subtype: C	1	231	6A,14P,15L,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347415	CAP061_2_00	South Africa	2004	13	genomic RNA	subtype: C	1	231	6A,14P,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347416	CAP061_2_00	South Africa	2004	14	genomic RNA	subtype: C	1	231	6A,14P,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347417	CAP061_2_00	South Africa	2004	15	genomic RNA	subtype: C	1	231	6A,14P,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347418	CAP061_2_00	South Africa	2004	16	genomic RNA	subtype: C	1	231	6A,14P,15L,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347419	CAP061_2_00	South Africa	2004	17	genomic RNA	subtype: C	1	231	6A,14P,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347420	CAP061_2_00	South Africa	2004	18	genomic RNA	subtype: C	1	231	6A,14P,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347421	CAP061_2_00	South Africa	2004	19	genomic RNA	subtype: C	1	231	6A,14P,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347422	CAP061_2_00	South Africa	2004	20	genomic RNA	subtype: C	1	231	6A,14P,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347638	CAP061_2_00	South Africa	2004		genomic RNA	subtype: C	1	231	6A,14P,15L,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347639	CAP061_2_03	South Africa	2005		genomic RNA	subtype: C	1	231	6A,14P,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347640	CAP061_3_08	South Africa	2005		genomic RNA	subtype: C	1	231	6A,14P,15L,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347641	CAP061_3_10	South Africa	2005		genomic RNA	subtype: C	1	231	6A,14P,15L,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347423	CAP061_3_14	South Africa	2005	01	genomic RNA	subtype: C	1	231	6A,14P,15L,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,153V,154K,169F,178T,180D,187D,203R,208G,225S
EU347424	CAP061_3_14	South Africa	2005	02	genomic RNA	subtype: C	1	231	6A,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347425	CAP061_3_14	South Africa	2005	03	genomic RNA	subtype: C	1	231	6A,14P,15L,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347426	CAP061_3_14	South Africa	2005	05	genomic RNA	subtype: C	1	231	6A,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347427	CAP061_3_14	South Africa	2005	06	genomic RNA	subtype: C	1	231	6A,14P,15L,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347428	CAP061_3_14	South Africa	2005	07	genomic RNA	subtype: C	3	231	6A,14P,15L,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347429	CAP061_3_14	South Africa	2005	08	genomic RNA	subtype: C	1	231	6A,14P,15L,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347430	CAP061_3_14	South Africa	2005	09	genomic RNA	subtype: C	1	231	6A,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347431	CAP061_3_14	South Africa	2005	10	genomic RNA	subtype: C	1	231	6A,14P,15L,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347642	CAP061_3_14	South Africa	2005		genomic RNA	subtype: C	1	231	6A,14P,15L,27I,41T,71D,83L,87Q,91V,96I,110N,116A,120H,148V,154K,169F,178T,180D,187D,203R,208G,225S
EU347433	CAP061_4_20	South Africa	2006	01	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,56F,71D,83L,87Q,91V,116A,118I,120G,148V,154K,169F,178T,180D,187D,207T,208G,225S
EU347434	CAP061_4_20	South Africa	2006	02	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,56F,71D,83L,87Q,91V,116A,118I,120G,148V,154K,169F,178T,180D,187D,207T,208G,225S
EU347435	CAP061_4_20	South Africa	2006	03	genomic RNA	subtype: C	1	231	4P,6L,14P,27I,41T,56F,71D,83L,87Q,91V,107A,116A,118I,120G,148V,154K,169F,178T,180D,187D,207T,208G,225S
EU347436	CAP061_4_20	South Africa	2006	04	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,56F,71D,83L,87Q,91V,116A,118I,120G,148V,154K,169F,178T,180D,187D,207T,208G,225S
EU347437	CAP061_4_20	South Africa	2006	05	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,56F,71D,83L,87Q,91V,116A,118I,120G,148V,154K,169F,178T,180D,187D,207T,208G,225S
EU347439	CAP061_4_20	South Africa	2006	07	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,56F,71D,83L,87Q,91V,116A,118I,120G,148V,154K,169F,178T,180D,187D,207T,208G,225S
EU347440	CAP061_4_20	South Africa	2006	08	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,56F,71D,83L,87Q,91V,116A,118I,120G,148V,154K,169F,178T,180D,187D,207T,208G,225S
EU347441	CAP061_4_20	South Africa	2006	10	genomic RNA	subtype: C	1	201	6L,14P,15L,27I,41T,56F,71D,83L,87Q,91V,116A,118I,120G,148V,154K,169F,178T,180D,187D
EU347442	CAP061_4_20	South Africa	2006	12	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,56F,71D,83L,87Q,91V,116A,118I,120G,148V,154K,169F,178T,180D,187D,207T,208G,225S
EU347644	CAP065_2_00	South Africa	2005		genomic RNA	subtype: C	1	231	6L,14S,15L,27I,41T,71D,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,208G,210S
EU347645	CAP065_2_04	South Africa	2005		genomic RNA	subtype: C	1	231	6L,14S,15L,27I,41T,71D,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,208G,210S
EU347646	CAP065_2_07	South Africa	2005		genomic RNA	subtype: C	1	231	6L,14S,15L,27I,41T,71D,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,208G,210S
EU347647	CAP065_4_17	South Africa	2006		genomic RNA	subtype: C	1	231	6L,27I,41T,71D,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,208G,210P
EU347685	CAP069_2_00	South Africa	2005		genomic RNA	subtype: C	1	231	6L,27I,41T,71D,83L,91A,96I,116T,120S,128D,148V,169F,178T,187D,203R,208G
EU347686	CAP069_2_04	South Africa	2006		genomic RNA	subtype: C	1	231	6L,27I,41T,71D,83L,91A,96I,116T,120S,128D,148V,169F,178T,187D,203R,208G
EU347687	CAP069_3_09	South Africa	2006		genomic RNA	subtype: C	1	231	6L,27I,41T,71D,83L,91A,96I,116T,120S,128D,148V,169F,178T,187D,203R,208G
EU347688	CAP084_2_00	South Africa	2006		genomic RNA	subtype: C	1	231	6L,27I,41T,71D,91V,116A,120G,124V,148V,169F,178T,180D,210S,225S
EU347689	CAP084_3_08	South Africa	2005		genomic RNA	subtype: C	1	231	6L,27I,41T,71D,83L,96L,116A,124V,128D,148V,154K,169F,171V,178T,180D,187D,191I,225S
EU347690	CAP084_3_09	South Africa	2005		genomic RNA	subtype: C	1	231	6L,27I,41T,71D,83L,96L,116A,124V,128D,148V,154K,169F,171V,178T,180D,187D,191I,225S
EU347443	CAP085_2_00	South Africa	2005	01	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D,203R,208G
EU347444	CAP085_2_00	South Africa	2005	02	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D,203R,208G
EU347445	CAP085_2_00	South Africa	2005	03	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D,203R,208G
EU347446	CAP085_2_00	South Africa	2005	04	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D,203R,208G
EU347447	CAP085_2_00	South Africa	2005	05	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D,203R,208G
EU347448	CAP085_2_00	South Africa	2005	06	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D,203R,208G
EU347449	CAP085_2_00	South Africa	2005	07	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D,203R,208G
EU347450	CAP085_2_00	South Africa	2005	08	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D,203R,208G
EU347451	CAP085_2_00	South Africa	2005	09	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D,203R,208G
EU347452	CAP085_2_00	South Africa	2005	10	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D,203R,208G
EU347453	CAP085_2_00	South Africa	2005	13	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,55T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D,203R,208G
EU347454	CAP085_2_00	South Africa	2005	15	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D,203R,208G
EU347455	CAP085_2_00	South Africa	2005	16	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D,203R,208G
EU347456	CAP085_2_00	South Africa	2005	17	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D,203R,208G
EU347457	CAP085_2_00	South Africa	2005	18	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D,203R,208G
EU347458	CAP085_2_00	South Africa	2005	19	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D,203R,208G
EU347459	CAP085_2_00	South Africa	2005	20	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D,203R,208G
EU347648	CAP085_2_00	South Africa	2005		genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D,203R,208G
EU347460	CAP085_2_05	South Africa	2005	01	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83T,91V,96L,110N,116A,120S,124V,148V,154K,169F,178T,187D,203R,208G
EU347461	CAP085_2_05	South Africa	2005	02	genomic RNA	subtype: C	1	203	14P,15L,27I,41T,71D,83T,91V,96L,110N,116A,120S,124V,148V,154K,169F,178T,187D,203R
EU347462	CAP085_2_05	South Africa	2005	04	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83T,91V,96L,110N,116A,120S,124V,148V,154K,169F,178T,187D,203R,208G
EU347463	CAP085_2_05	South Africa	2005	05	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D,203R,208G
EU347464	CAP085_2_05	South Africa	2005	06	genomic RNA	subtype: C	1	201	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D
EU347465	CAP085_2_05	South Africa	2005	07	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D,203R,208G
EU347466	CAP085_2_05	South Africa	2005	08	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120S,124V,148V,154K,169F,178T,187D,203R,208G
EU347467	CAP085_2_05	South Africa	2005	09	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120S,124V,148V,154K,169F,178T,187D,203R,208G
EU347468	CAP085_2_05	South Africa	2005	10	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D,203R,208G
EU347469	CAP085_2_05	South Africa	2005	11	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D,203R,208G
EU347470	CAP085_2_05	South Africa	2005	12	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,110N,116A,120A,124V,148V,154K,169F,178T,187D,203R,208G
EU347649	CAP085_2_05	South Africa	2005		genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83T,91V,96L,110N,116A,120S,124V,148V,154K,169F,178T,187D,203R,208G
EU347650	CAP085_3_10	South Africa	2005		genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,113D,116A,120S,124V,148V,154K,169F,178T,187D,203R,208G
EU347651	CAP085_3_16	South Africa	2006		genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
EU347471	CAP085_4_18	South Africa	2006	01	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
EU347472	CAP085_4_18	South Africa	2006	02	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,116A,120S,124V,148A,154K,169F,178T,180D,187D,203R,208G
EU347473	CAP085_4_18	South Africa	2006	03	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
EU347474	CAP085_4_18	South Africa	2006	04	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
EU347475	CAP085_4_18	South Africa	2006	05	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
EU347476	CAP085_4_18	South Africa	2006	07	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
EU347477	CAP085_4_18	South Africa	2006	08	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
EU347478	CAP085_4_18	South Africa	2006	09	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,116A,120S,124V,128D,148V,154K,169F,178T,180D,187N,203R,208G
EU347479	CAP085_4_18	South Africa	2006	10	genomic RNA	subtype: C	1	231	14P,15L,27I,35K,41T,71D,83I,91V,96L,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
EU347480	CAP085_4_18	South Africa	2006	11	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
EU347481	CAP085_4_18	South Africa	2006	12	genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
EU347652	CAP085_4_18	South Africa	2006		genomic RNA	subtype: C	1	231	14P,15L,27I,41T,71D,83I,91V,96L,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
EU347482	CAP088_2_00	South Africa	2005	01	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347483	CAP088_2_00	South Africa	2005	02	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347484	CAP088_2_00	South Africa	2005	03	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347485	CAP088_2_00	South Africa	2005	04	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347486	CAP088_2_00	South Africa	2005	05	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347487	CAP088_2_00	South Africa	2005	06	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347488	CAP088_2_00	South Africa	2005	07	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,173K,178T,180D,187D,203R,207S,208G,225S
EU347489	CAP088_2_00	South Africa	2005	08	genomic RNA	subtype: C	1	231	6P,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,110S,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347490	CAP088_2_00	South Africa	2005	09	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347491	CAP088_2_00	South Africa	2005	10	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347492	CAP088_2_00	South Africa	2005	11	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,209L,210S,225S
EU347493	CAP088_2_00	South Africa	2005	12	genomic RNA	subtype: C	1	231	6P,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,110S,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347494	CAP088_2_00	South Africa	2005	13	genomic RNA	subtype: C	1	231	6P,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,110S,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347495	CAP088_2_00	South Africa	2005	14	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347496	CAP088_2_00	South Africa	2005	15	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347497	CAP088_2_00	South Africa	2005	16	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,110N,116A,120G,128D,143G,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347498	CAP088_2_00	South Africa	2005	17	genomic RNA	subtype: C	1	231	6P,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,173K,178T,180D,187D,203R,207S,208G,225S
EU347499	CAP088_2_00	South Africa	2005	18	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347500	CAP088_2_00	South Africa	2005	19	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347501	CAP088_2_00	South Africa	2005	20	genomic RNA	subtype: C	1	231	6P,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,110S,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347653	CAP088_2_00	South Africa	2005		genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347654	CAP088_2_05	South Africa	2005		genomic RNA	subtype: C	1	231	6P,12R,13H,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,110N,116V,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347655	CAP088_3_09	South Africa	2005		genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347502	CAP088_3_15	South Africa	2006	01	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,50H,71D,83L,91N,92P,116A,120G,128D,148V,154K,168L,169F,178T,180D,187D,203R,207S,208G,225S
EU347503	CAP088_3_15	South Africa	2006	02	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347504	CAP088_3_15	South Africa	2006	03	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,50H,71D,83L,91N,92P,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347505	CAP088_3_15	South Africa	2006	04	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,29G,31G,41T,50H,71D,83L,91N,92P,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347506	CAP088_3_15	South Africa	2006	05	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,50H,71D,83L,91N,92P,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347507	CAP088_3_15	South Africa	2006	06	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,50H,71D,83L,91N,92P,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347508	CAP088_3_15	South Africa	2006	07	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41I,50H,71D,83L,91N,92P,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347509	CAP088_3_15	South Africa	2006	09	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,29G,31G,41T,50H,71D,83L,91N,92P,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347510	CAP088_3_15	South Africa	2006	10	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,50H,68T,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347511	CAP088_3_15	South Africa	2006	11	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347512	CAP088_3_15	South Africa	2006	12	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,50H,71D,83L,91N,92P,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347656	CAP088_3_15	South Africa	2006		genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347513	CAP088_4_18	South Africa	2006	01	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,50H,71D,83L,91N,92P,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347514	CAP088_4_18	South Africa	2006	02	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347515	CAP088_4_18	South Africa	2006	03	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,50H,71D,83L,91N,92P,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347516	CAP088_4_18	South Africa	2006	04	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,50H,71D,83L,91N,92P,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347517	CAP088_4_18	South Africa	2006	05	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,49S,50H,71D,83L,91N,92P,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347518	CAP088_4_18	South Africa	2006	06	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,50H,71D,83L,91N,92P,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347519	CAP088_4_18	South Africa	2006	07	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,50H,71D,83L,91N,92P,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347520	CAP088_4_18	South Africa	2006	08	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347521	CAP088_4_18	South Africa	2006	09	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,50H,71D,83L,91N,92P,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347522	CAP088_4_18	South Africa	2006	10	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347523	CAP088_4_18	South Africa	2006	11	genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,50H,71D,83L,91N,92P,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347524	CAP088_4_18	South Africa	2006	12	genomic RNA	subtype: C	1	204	6P,13H,14P,27I,31G,41T,50H,71D,83L,91N,92P,110N,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R
EU347657	CAP088_4_18	South Africa	2006		genomic RNA	subtype: C	1	231	6P,13H,14P,27I,31G,41T,50H,71D,83L,91N,92P,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,207S,208G,225S
EU347691	CAP174_2_00	South Africa	2005		genomic RNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,118I,120G,148V,154K,169F,178T,180D,187D,203R,208G
EU347692	CAP174_2_06	South Africa	2005		genomic RNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,118I,120G,148V,154K,169F,178T,180D,187D,203R,208G
EU347693	CAP174_3_09	South Africa	2006		genomic RNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116A,118I,120G,148V,154K,169F,178T,180D,187D,203R,208G
EU347525	CAP200_2_00	South Africa	2005	01	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347526	CAP200_2_00	South Africa	2005	02	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347527	CAP200_2_00	South Africa	2005	03	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347528	CAP200_2_00	South Africa	2005	04	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,161L,169F,178T,180D,187D,203R,208G,225S
EU347529	CAP200_2_00	South Africa	2005	05	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,186A,187D,203R,208G,225S
EU347530	CAP200_2_00	South Africa	2005	06	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,185V,187D,203R,208G,225S
EU347531	CAP200_2_00	South Africa	2005	07	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347532	CAP200_2_00	South Africa	2005	08	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347533	CAP200_2_00	South Africa	2005	09	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347534	CAP200_2_00	South Africa	2005	10	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347535	CAP200_2_00	South Africa	2005	11	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347536	CAP200_2_00	South Africa	2005	12	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347658	CAP200_2_00	South Africa	2005		genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347659	CAP200_2_05	South Africa	2006		genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347537	CAP200_3_09	South Africa	2006	01	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347538	CAP200_3_09	South Africa	2006	02	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347539	CAP200_3_09	South Africa	2006	03	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347540	CAP200_3_09	South Africa	2006	04	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347541	CAP200_3_09	South Africa	2006	05	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,29K,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347542	CAP200_3_09	South Africa	2006	07	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347543	CAP200_3_09	South Africa	2006	08	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347544	CAP200_3_09	South Africa	2006	09	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347545	CAP200_3_09	South Africa	2006	10	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,61R,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347546	CAP200_3_09	South Africa	2006	11	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347547	CAP200_3_09	South Africa	2006	12	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347548	CAP200_3_09	South Africa	2006	13	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347549	CAP200_3_09	South Africa	2006	14	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347550	CAP200_3_09	South Africa	2006	15	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347551	CAP200_3_09	South Africa	2006	16	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347552	CAP200_3_09	South Africa	2006	17	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347553	CAP200_3_09	South Africa	2006	18	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347554	CAP200_3_09	South Africa	2006	19	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347555	CAP200_3_09	South Africa	2006	20	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,61R,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347660	CAP200_3_09	South Africa	2006		genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,110N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347556	CAP200_3_16	South Africa	2006	01	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347557	CAP200_3_16	South Africa	2006	02	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347558	CAP200_3_16	South Africa	2006	03	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347559	CAP200_3_16	South Africa	2006	04	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347560	CAP200_3_16	South Africa	2006	05	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347561	CAP200_3_16	South Africa	2006	06	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347562	CAP200_3_16	South Africa	2006	07	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347563	CAP200_3_16	South Africa	2006	08	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347564	CAP200_3_16	South Africa	2006	09	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347565	CAP200_3_16	South Africa	2006	10	genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347661	CAP200_3_16	South Africa	2006		genomic RNA	subtype: C	1	231	6L,14P,15L,26A,41I,71D,83L,91N,116A,120S,124V,135V,148V,169F,178T,180D,187D,203R,208G,225S
EU347694	CAP206_2_00	South Africa	2005		genomic RNA	subtype: C	1	231	6L,12R,27I,41T,71D,83L,87P,91P,96L,98D,116A,120H,124V,128G,136M,148V,153T,169F,178T,187D,200S,208G
EU347695	CAP206_2_05	South Africa	2005		genomic RNA	subtype: C	1	231	6L,27I,41T,57D,71D,83L,87P,91P,96L,98D,116A,120H,124V,128D,131E,136M,148V,169F,178T,187D,200S,208G
EU347696	CAP206_3_10	South Africa	2006		genomic RNA	subtype: C	1	231	6L,27I,41T,71D,83L,87P,91P,96L,98D,116A,120H,124V,128D,136M,148V,169F,178T,187D,200S,208G
EU347697	CAP210_2_00	South Africa	2005		genomic RNA	subtype: C	1	231	6H,27I,41T,71D,83T,116A,148V,154K,169F,178T,180D,187D,203R,208G
EU347698	CAP210_2_05	South Africa	2005		genomic RNA	subtype: C	1	231	6H,27I,41T,71D,83T,104T,116A,148V,154K,169F,178T,180D,187D,203R,208G
EU347699	CAP210_3_10	South Africa	2005		genomic RNA	subtype: C	1	231	6H,27I,41T,71D,83T,116A,148V,154K,169F,178T,180D,187D,203R,208G
EU347566	CAP225_2_01	South Africa	2005	01	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347567	CAP225_2_01	South Africa	2005	02	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110N,116A,120G,124V,128D,148V,169F,178T,187D,203R,208G
EU347568	CAP225_2_01	South Africa	2005	04	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347569	CAP225_2_01	South Africa	2005	05	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347570	CAP225_2_01	South Africa	2005	06	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347571	CAP225_2_01	South Africa	2005	07	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110N,116A,120S,128D,148V,169F,178T,181A,187D,203R,208G
EU347572	CAP225_2_01	South Africa	2005	08	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347573	CAP225_2_01	South Africa	2005	09	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110N,116A,120G,124V,128D,148V,169F,178T,187D,203R,208G
EU347574	CAP225_2_01	South Africa	2005	10	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,82K,83L,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347575	CAP225_2_01	South Africa	2005	11	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110N,116A,120G,124V,128D,148V,169F,178T,187D,203R,208G
EU347576	CAP225_2_01	South Africa	2005	13	genomic RNA	subtype: C	1	231	6L,14P,15L,25R,27I,41T,71D,83L,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G,210R
EU347577	CAP225_2_01	South Africa	2005	14	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347578	CAP225_2_01	South Africa	2005	15	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347579	CAP225_2_01	South Africa	2005	16	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347580	CAP225_2_01	South Africa	2005	17	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347581	CAP225_2_01	South Africa	2005	18	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347582	CAP225_2_01	South Africa	2005	19	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347662	CAP225_2_01	South Africa	2005		genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347663	CAP225_2_06	South Africa	2006		genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347664	CAP225_3_10	South Africa	2006		genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110S,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347583	CAP225_3_16	South Africa	2006	01	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347584	CAP225_3_16	South Africa	2006	02	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,50S,71D,83L,110N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
EU347585	CAP225_3_16	South Africa	2006	03	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110S,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347586	CAP225_3_16	South Africa	2006	04	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110S,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347587	CAP225_3_16	South Africa	2006	05	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,50S,71D,83L,110N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
EU347588	CAP225_3_16	South Africa	2006	06	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,50S,71D,83L,110N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
EU347589	CAP225_3_16	South Africa	2006	07	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110S,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347591	CAP225_3_16	South Africa	2006	09	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,50S,71D,83L,110N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
EU347593	CAP225_3_16	South Africa	2006	11	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,50S,71D,83L,110N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
EU347594	CAP225_3_16	South Africa	2006	12	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110N,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347595	CAP225_3_16	South Africa	2006	13	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110S,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347596	CAP225_3_16	South Africa	2006	14	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110S,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347665	CAP225_3_16	South Africa	2006		genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110S,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347597	CAP225_4_17	South Africa	2006	01	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,50S,71D,83L,110S,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
EU347598	CAP225_4_17	South Africa	2006	02	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,50S,71D,83L,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347599	CAP225_4_17	South Africa	2006	03	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,50S,71D,83L,110N,116A,120S,124V,128D,148V,169F,178A,187D,203R,208G
EU347600	CAP225_4_17	South Africa	2006	04	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110S,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347601	CAP225_4_17	South Africa	2006	05	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,50S,71D,83L,110N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
EU347602	CAP225_4_17	South Africa	2006	06	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,50S,71D,83L,110N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
EU347603	CAP225_4_17	South Africa	2006	07	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,50S,71D,83L,108I,110N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
EU347604	CAP225_4_17	South Africa	2006	08	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,50S,71D,83L,110N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
EU347605	CAP225_4_17	South Africa	2006	11	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,50S,71D,83L,110N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
EU347606	CAP225_4_17	South Africa	2006	12	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,50S,71D,83L,110N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
EU347607	CAP225_4_17	South Africa	2006	13	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,110S,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347608	CAP225_4_17	South Africa	2006	14	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,50S,71D,83L,110N,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
EU347609	CAP225_4_17	South Africa	2006	15	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,50S,71D,83L,110S,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
EU347610	CAP225_4_17	South Africa	2006	16	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,71D,83L,116A,120S,128D,148V,169F,178T,187D,203R,208G
EU347666	CAP225_4_17	South Africa	2006		genomic RNA	subtype: C	1	231	6L,14P,15L,27I,41T,50S,71D,83L,116A,120S,124V,128D,148V,169F,178T,187D,203R,208G
EU347611	CAP228_2_01	South Africa	2005	01	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,225S
EU347612	CAP228_2_01	South Africa	2005	02	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,225S
EU347613	CAP228_2_01	South Africa	2005	03	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,225S
EU347614	CAP228_2_01	South Africa	2005	04	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,225S
EU347615	CAP228_2_01	South Africa	2005	05	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,225S
EU347616	CAP228_2_01	South Africa	2005	06	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,225S
EU347617	CAP228_2_01	South Africa	2005	07	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,225S
EU347618	CAP228_2_01	South Africa	2005	08	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,225S
EU347620	CAP228_2_01	South Africa	2005	11	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,225S
EU347621	CAP228_2_01	South Africa	2005	12	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,225S
EU347622	CAP228_2_01	South Africa	2005	13	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,225S
EU347623	CAP228_2_01	South Africa	2005	14	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,225S
EU347624	CAP228_2_01	South Africa	2005	15	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,225S
EU347625	CAP228_2_01	South Africa	2005	17	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,225S
EU347626	CAP228_2_01	South Africa	2005	19	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,225S
EU347627	CAP228_2_01	South Africa	2005	20	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,225S
EU347667	CAP228_2_01	South Africa	2005		genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,225S
EU347668	CAP228_2_03	South Africa	2005		genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,225S
EU347669	CAP228_3_09	South Africa	2005		genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,225S
EU347670	CAP228_3_13	South Africa	2006		genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91V,98K,110N,115V,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,225S
EU347628	CAP228_4_19	South Africa	2007	02	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91A,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,204G,208G,225S
EU347629	CAP228_4_19	South Africa	2007	03	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91A,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,204G,208G,225S
EU347630	CAP228_4_19	South Africa	2007	04	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,204G,208G,225S
EU347631	CAP228_4_19	South Africa	2007	05	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91A,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,204G,208G,225S
EU347632	CAP228_4_19	South Africa	2007	06	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,187D,203R,204G,208G,225S
EU347633	CAP228_4_19	South Africa	2007	07	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91A,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,204G,208G,225S
EU347634	CAP228_4_19	South Africa	2007	10	genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91A,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,204G,208G,225S
EU347671	CAP228_4_19	South Africa	2007		genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,91V,110N,116A,120S,128D,148V,169F,178T,180D,187D,203R,208G,225S
EU347700	CAP244_2_00	South Africa	2005		genomic RNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116N,120A,128D,148V,154K,169F,178T,180D,187D,191I,203R,208G
EU347701	CAP244_2_04	South Africa	2005		genomic RNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116N,120A,128D,148V,154K,168S,169F,178T,180D,187D,191I,201T,203R,208G
EU347702	CAP244_3_09	South Africa	2005		genomic RNA	subtype: C	1	231	6L,27I,41T,71D,83L,91V,116N,120A,128D,148V,154K,169F,178T,180D,187D,191I,203R,208G
EU347703	CAP248_2_00	South Africa	2005		genomic RNA	subtype: C	1	231	6L,27I,41T,71D,83L,93A,116A,120G,124V,148V,169F,178T,203R,227E
EU347704	CAP248_2_03	South Africa	2005		genomic RNA	subtype: C	1	231	5D,6L,27I,41T,71D,83L,93A,116A,120G,124V,127R,148V,169F,178T,203R
EU347705	CAP248_3_08	South Africa	2005		genomic RNA	subtype: C	1	231	6L,27I,41T,71D,83L,93A,116A,120G,124V,148V,169F,178T,203R
EU347672	CAP255_2_00	South Africa	2005		genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,112A,116A,118I,135V,148V,154K,169F,178T,187D,200S,203R,208G
EU347673	CAP255_2_04	South Africa	2005		genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,112A,116A,124V,135V,148V,154K,169F,178T,187D,200S,203R,208G
EU347674	CAP255_3_08	South Africa	2005		genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,112A,116A,124V,135V,148V,154K,169F,178T,187D,200S,203R,208G
EU347675	CAP255_4_18	South Africa	2006		genomic RNA	subtype: C	1	231	6L,14P,15L,27I,31S,41T,71D,83L,112A,116A,124V,135V,148V,154K,169F,178T,187D,200S,203R,208G
EU347706	CAP256_2_00	South Africa	2005		genomic RNA	subtype: C	1	231	6L,27I,41T,71D,83T,96I,116A,128D,134M,148V,169F,178T,180D,203R,204G,207Q,208G,213G,225S
EU347707	CAP256_2_05	South Africa	2005		genomic RNA	subtype: C	1	231	6L,27I,41T,54A,71D,83T,96I,116A,128D,148V,169F,178T,180D,203R,204G,207Q,208G,225S
EU347708	CAP256_3_10	South Africa	2006		genomic RNA	subtype: C	1	231	6L,13P,41T,71D,83L,94N,116A,120S,128D,148V,154K,169F,177S,178T,187D,203R,208G
EU347709	CAP257_2_00	South Africa	2005		genomic RNA	subtype: C	1	231	6L,15L,27I,41T,71D,83L,91A,92P,116A,120G,124V,128D,148V,169F,178T,187D,203R,207Q,208G
EU347710	CAP257_2_05	South Africa	2005		genomic RNA	subtype: C	1	231	6L,15L,27I,41T,71D,83L,91A,92P,98G,116A,120G,124V,128D,148V,169F,178T,187D,203R,207Q,208G
EU347711	CAP257_3_10	South Africa	2006		genomic RNA	subtype: C	1	231	6L,15L,27I,41T,71D,83L,91A,92P,116A,120G,124V,128D,148V,169F,178T,187D,203R,207Q,208G
EU347712	CAP258_2_00	South Africa	2005		genomic RNA	subtype: C	1	231	6L,15L,27I,41T,71D,83L,116N,120S,148V,154K,169F,178T,180D,187D,203R,208G
EU347713	CAP258_2_06	South Africa	2005		genomic RNA	subtype: C	1	231	6L,15L,27I,41T,71D,83L,116N,120S,148V,154K,169S,178T,180D,187D,203R,208G
EU347714	CAP258_3_09	South Africa	2005		genomic RNA	subtype: C	1	231	6L,15L,27I,41T,71D,83L,116N,120S,148V,154K,169F,178T,180D,187D,203R,208G

Genbank References: capsid (p24)

Database

Resources

Team