<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Land (2016) Full-length HIV type 1 proviral sequencing of 10 highly exposed women from Nairobi, Kenya reveals a high proportion of intersubtype recombinants AIDS Res. Hum. Retroviruses 24 (6), 865-872 (2008) 4.2e-149 13          

Download sequences

AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
EU110086ML1076Kenyagenomic DNAclade C/D12316L,15L,27I,41T,71D,83L,96I,116T,148V,154K,169F,178T,187D,203R,208G,210S,225S
EU110087ML1901Kenyagenomic DNAclade A112316A,11I,12L,14T,15L,27I,31G,54M,58I,71D,83L,92P,102G,111P,115L,116A,120S,124V,128D,148V,154K,169F,178T,180D,200S,207T,208G,225S
EU110095ML1901PCR2Kenyagenomic DNAclade A112316A,11I,12L,14T,15L,27I,31G,54M,58I,71D,83L,92P,102G,111P,115L,116A,120S,124V,128D,148V,154K,169F,178T,180D,200S,207T,208G,225S
EU110088ML1945Kenyagenomic DNAclade A112316A,11M,12Y,26A,27I,30R,31G,36I,41A,54M,56M,58I,71D,83L,87Q,92P,111P,120S,128D,148V,154K,169F,178T,194S,200S,203R,208G,225S
EU110089ML1956Kenyagenomic DNAclade A2/D/C12316A,14P,15L,31S,41T,83L,92P,110N,120S,148V,169F,178T,187D,188S,203R,208G
EU110090ML1974Kenyagenomic DNAclade D/A112316L,27I,41T,83L,91V,98D,116A,120S,124V,148V,154K,183G,208G,225S
EU110091ML1979Kenyagenomic DNAclade A1/G/C12316A,11I,14S,15M,27I,50T,54M,58I,71D,83L,86A,87Q,91Y,92P,96I,116T,120S,128D,148V,154K,169F,171V,178T,180D,187D,203R,207S,208G
EU110096ML1979PCRKenyagenomic DNAclade A1/G/C12316A,11I,14S,15M,27I,50T,54M,58I,71D,83L,86A,87Q,91F,92P,96I,116T,120S,128D,148V,154K,169F,170R,171V,178T,180D,187D,203R,207S,208G
EU110092ML1990Kenyagenomic DNAclade A112316A,10L,11T,15L,27I,54M,58I,71D,83T,87Q,96I,111P,116R,128D,148V,154K,169F,178T,187D,200S,203R,208G,217S
EU110097ML1990PCRKenyagenomic DNAclade A112316A,10L,11T,15L,27I,54M,58I,71D,83T,87HQ,92P,96IM,111P,116GR,120NS,128D,148V,154K,169F,178T,187D,200S,203R,208G,217S
EU110093ML2000Kenyagenomic DNAclade A1/C/D12312V,6A,14N,15L,27I,54M,58I,71D,83L,92P,111V,120S,128D,148V,154K,169F,178T,183DGNS,187D,200N,203R,208G,210S,225S
EU110094ML2014Kenyagenomic DNAclade A112316A,11I,15L,26A,27I,30R,31G,54M,58I,71D,83L,92P,111P,120G,128D,148V,154K,169F,178T,183S,187A,200S,203R,208G
EU110085ML752Kenyagenomic DNAclade A112316A,11T,14N,15L,27I,54V,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,171A,178T,183G,200S,207T,208G,210S

Database

Resources

Team