<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Chen (2020) Laos is Affected by HIV CRF01_AE and the Newly Identified CRF97_01B Virol Sin (2020) In press 1.93e-152 61 61 Uncertain PBMC Direct PCR Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
MG760371BL12F4561Laos20-May-2012genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,96L,128D,148V,178T,200S,207T,208G,225S
MG760372BL33M4535Laos20-May-2012genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,41T,54M,58I,86A,87Q,91F,92P,96L,135V,148V,149G,198G,199N,200S,201F,206E,207T,208G,215R,222R,225S
MG760373BL33M5227Laos30-May-2012genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,58I,83L,92P,120S,146R,148V,154K,178T,200S,208G,225S
MG760374BL38F5131Laos30-May-2012genomic DNAsubtype: CRF01_AE12316A,13H,14L,15L,23L,24G,26S,27I,28K,29K,31G,33N,36I,40V,41L,42T,43F,46R,48P,51E,54M,55K,57K,58I,59R,60R,83L,92P,120G,123S,128D,148V,178T,200S,207Q,208G,225S
MG760375BL38F5143Laos30-May-2012genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200A,207T,208G,225S
MG760376BL38M5270Laos30-May-2012genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,128D,178T,200S,207T,208G,225S
MG760377BL40F5333Laos20-May-2012genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,83I,92P,120G,123A,128D,148V,178T,200S,207T,208G,225S
MG760378BL41F5229Laos30-May-2012genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,87P,92P,98D,107S,120S,124V,128D,139H,148V,178T,200S,207S,208G,225S
MG760379BL50F5250Laos30-May-2012genomic DNAsubtype: 01B12316L,15L,41T,83L,87Q,91N,93Q,96L,116A,120H,143K,154K,156R,159K,162K,167Q,173K,180K,206R,212K,214I,215I,220K,222E,223R,229K,230I
MG760380KH18F5154Laos30-May-2012genomic DNAsubtype: 01B12316L,15L,41T,83L,87HQ,91N,96L,116A,120H,154K
MG760381KH19F5101Laos30-May-2012genomic DNAsubtype: CRF01_AE12316A,14S,15L,31G,33N,54M,58I,87Q,92P,120S,128D,129L,148V,200S,207T,208G,225S
MG760382VI12F4094Laos01-Dec-2011genomic DNAsubtype: CRF01_AE12316A,15V,31G,33N,54M,58I,87Q,92P,96L,110N,128D,148V,149G,154K,178T,200A,203R,207T,208G
MG760383VI15M4478Laos01-Jan-2012genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
MG760384VI20F3001Laos01-Nov-2011genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33K,54M,58I,83T,92P,128D,146N,148V,178T,200S,207T,208G,225S
MG760385VI20F3007Laos01-Nov-2011genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,41T,54M,58I,83I,86A,87Q,91F,92P,96L,148V,149G,154K,200S,207T,208G,225S
MG760386VI20F5274Laos20-May-2012genomic DNAsubtype: 01B12316L,41T,83L,87Q,96I,98D,115V,116A,120S
MG760387VI20M4446Laos01-Jan-2012genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
MG760388VI21M5276Laos20-May-2012genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,83L,92P,120S,123A,128D,148V,178T,200S,207T,208G,225S
MG760389VI22F3810Laos01-Dec-2011genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,83L,86P,87Q,91Y,92P,96L,98D,110N,120S,128D,148V,178T,183A,200S,207T,208G,210S,225S
MG760390VI22F3899Laos01-Dec-2011genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,60GR,83L,92P,120G,123A,128D,131R,146N,148V,178T,200S,203R,207T,208G,225S
MG760391VI25F3297Laos01-Nov-2011genomic DNAsubtype: CRF01_AE12316A,14S,15L,31G,33N,54M,58I,92P,115V,120S,123S,128D,148IT,178T,200S,207Q,208G,225S
MG760392VI25F4357Laos01-Jan-2012genomic DNAsubtype: CRF01_AE12316V,14P,15L,31G,33N,54M,58I,92P,120S,128D,148V,165I,178T,191I,200A,207T,208G,210S,225S
MG760393VI25F4363Laos01-Jan-2012genomic DNAsubtype: CRF01_AE12316A,11T,14S,15L,31G,54M,58I,92P,111I,120S,123S,128D,146N,148V,180D,200S,207T,208G,225S
MG760394VI26F2885Laos01-Nov-2011genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,83L,87Q,92P,96I,116A,120NS,128D,148V,178T,200S,204S,207T,208G,225S
MG760395VI26F2939Laos01-Nov-2011genomic DNAsubtype: CRF01_AE12316A,14P,15V,27I,31G,33N,54M,58I,83L,87Q,92P,96I,98D,116A,128D,131R,148V,178T,200A,203R,207A,208G,210S,225S
MG760396VI27F3026Laos01-Nov-2011genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,92P,120S,128D,178T,200S,207T,208G,225S
MG760397VI28F3940Laos01-Dec-2011genomic DNAsubtype: CRF01_AE12316A,14S,15L,31G,33N,54M,58I,83L,92P,120S,128D,148V,178T,200S,207T,208G,225S
MG760398VI29F2980Laos01-Nov-2011genomic DNAsubtype: CRF01_AE12316A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200A,207T,208G
MG760399VI29M2888Laos01-Nov-2011genomic DNAsubtype: 01B12316L,12Y,15L,41T,83L,87Q,91V,96I,111P,116A,120S,148V,199R,230I
MG760400VI29M3024Laos01-Nov-2011genomic DNAsubtype: CRF01_AE12316A,11I,14P,15L,31G,33N,54M,58I,92P,111I,120G,123A,128D,148V,178T,200A,203R,207S,208G,225S
MG760401VI29M9897Laos20-May-2012genomic DNAsubtype: CRF01_AE12316A,14S,31G,33N,54M,58I,87Q,92P,96I,98D,116T,128D,148V,200A,207T,208G,225S
MG760402VI30F2999Laos01-Nov-2011genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54I,58I,60R,71K,92P,120S,123A,128D,148V,178T,200S,207T,208G,225S
MG760403VI30F3147Laos01-Nov-2011genomic DNAsubtype: CRF01_AE12316A,10W,14S,15L,31G,33N,45D,54M,58I,83T,87Q,92P,110N,120S,148V,178T,200S,208G,225S
MG760404VI32M3901Laos01-Dec-2011genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,74K,92P,128D,148V,178T,200S,207T,208G,225S
MG760405VI33F3831Laos01-Dec-2011genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,83I,87Q,92P,120G,123A,128D,178T,204S,207T,208G,216I,225S
MG760406VI33M2961Laos01-Nov-2011genomic DNAsubtype: CRF01_AE12316A,14P,15A,31G,33N,41T,54M,58I,86A,87Q,91L,92P,96L,98D,116T,135V,148V,149G,154K,180D,200S,203R,207T,208G,225S
MG760407VI34M3902Laos01-Dec-2011genomic DNAsubtype: 01B12316L,83L,91N,96I,116A
MG760408VI35F2871Laos01-Nov-2011genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,83I,87Q,96I,110N,116A,128D,148V,178T,200A,203R,207T,208G,225S
MG760409VI36F3920Laos01-Dec-2011genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,92P,107S,120G,123A,128D,148V,178T,200A,203R,209P,210S,225S
MG760410VI36M3284Laos01-Nov-2011genomic DNAsubtype: CRF01_AE12316A,14S,15L,31G,33N,54M,58I,92P,110N,120G,128D,200S,207T,208G,216V,225S
MG760411VI36M3933Laos01-Dec-2011genomic DNAsubtype: CRF01_AE12316A,14P,15L,28K,29K,31G,33N,41T,51N,54I,58I,71K,75K,81N,82K,87Q,91F,92P,96L,98K,101K,116E,117*,118I,120H,127E,128K,133*,135V,137R,143K,154K,166N,167K,184*,185I,187Q,200S,206R,207T,208R,214I,220K,225S,229K
MG760412VI37F3781Laos01-Dec-2011genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,120G,123A,148V,178T,200S,207T,208G,225S
MG760413VI38F3375Laos01-Nov-2011genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,45D,54M,58I,71D,92P,128D,146N,148V,149G,200S,207T,208G,225S
MG760414VI38M3097Laos01-Nov-2011genomic DNAsubtype: CRF01_AE12316A,14P,15L,27I,31G,33N,54M,58I,71D,92P,111I,128D,163E,191I,200S,207R,208G,210S,225S
MG760415VI38M3815Laos01-Dec-2011genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,41T,54M,58I,86A,87Q,91F,92P,96L,116T,135V,148V,149G,154K,200S,207T,208G,225S
MG760416VI39F3163Laos01-Nov-2011genomic DNAsubtype: CRF01_AE12316A,14P,31G,33N,54M,58I,83L,92P,115V,128D,148V,149G,207T,208G,225S
MG760417VI41M3868Laos01-Dec-2011genomic DNAsubtype: CRF01_AE12316A,9H,14S,15L,31G,54M,58I,83I,92P,111I,115V,120S,124V,128D,148V,180D,200S,207T,208G,225S
MG760418VI42M2998Laos01-Nov-2011genomic DNAsubtype: CRF01_AE12316A,14P,15V,31S,33N,54M,58I,60R,82K,83L,89R,92P,97K,101R,107S,110N,116R,120S,128D,137R,148V,156R,200S,206R,207T,208E,223R,225S,229K
MG760419VI43F3290Laos01-Nov-2011genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,83L,92P,114R,120H,128D,131R,133C,146R,148A,154K,178T,200S,207T,208G,225S
MG760420VI44M3784Laos01-Dec-2011genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,128D,148I,178T,200S,207T,208G,225S
MG760421VI45M3233Laos01-Nov-2011genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,83T,87HQ,92P,96I,128D,148V,178T,200S,207T,208G,225S
MG760422VI47M3234Laos01-Nov-2011genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,71D,83L,87Q,92P,96I,116T,128D,148V,149G,183H,200S,207T,208G,225S,230F
MG760423VI48M3407Laos01-Nov-2011genomic DNAsubtype: CRF01_AE12316A,14P,31G,33N,41T,54M,58I,87Q,91F,92P,93A,96L,120H,135V,148V,149G,154K,178T,200A,203R,207T,208G,225S
MG760424VI50F3912Laos01-Dec-2011genomic DNAsubtype: CRF01_AE12316A,14P,31G,33N,54M,58I,79D,83A,92P,128D,200S,207T,208G,225S
MG760425VI50M3793Laos01-Dec-2011genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,83L,86P,87Q,91Y,92P,96L,98D,110N,120S,128D,148V,178T,183A,200S,207T,208G,210S,225S
MG760426VI52F3913Laos01-Dec-2011genomic DNAsubtype: CRF01_AE12316A,14P,31G,33N,54M,58I,92P,128D,148I,178T,200S,207T,208G,225S
MG760427VI53M3289Laos01-Nov-2011genomic DNAsubtype: CRF01_AE12316A,14P,15L,18K,28K,29K,31G,33N,54I,58I,61E,75K,81N,83L,87Q,91F,92P,96L,100K,101E,103N,116A,118I,120H,127K,128N,132K,137K,143K,148V,159K,163N,166N,167K,173K,178T,180K,200S,207S,208G,225S
MG760428VI60M3235Laos01-Nov-2011genomic DNAsubtype: CRF01_AE12316A,14S,15V,27I,31G,33N,54M,58I,86I,87Q,92P,96IM,110N,116A,120NS,128D,148V,178T,200A,207T,208G,225S
MG760429VI80M3893Laos01-Dec-2011genomic DNAsubtype: CRF01_AE12316A,14P,15L,27I,31G,33N,54M,58I,71D,92P,146R,148V,149G,154K,178T,183S,200S,207T,208G,225S
MG760430XA50F5221Laos30-May-2012genomic DNAsubtype: CRF01_AE12316A,14P,15M,31G,33N,54M,58I,92P,128D,178T,200A,207T,208G,210S,225S
MG760431XI38F4856Laos20-May-2012genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,64G,92P,110N,120S,128D,148V,183H,200S,207T,208G,225S

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