<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
O'Connor (2016) A dominant role for CD8+-T-lymphocyte selection in simian immunodeficiency virus sequence variation J. Virol. 78 (24), 14012-14022 (2004) 6.91e-100 26         NonM, HIV2, SIV

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
AY6114951937USAgenomic RNAmonkey 1937 at 167 weeks post infectionwith SIVmac23922312P,5Q,7G,9N,10Y,13L,14P,15L,26L,31K,33G,34A,37V,39G,41Q,47C,48C,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72V,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,111V,112D,116Q,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179P,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY6114932065USAgenomic RNAmonkey 2065 at 75 weeks post infectionwith SIVmac23922312P,5Q,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72I,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110S,111V,112D,116Q,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY61148680035USAgenomic RNAmonkey 80035 at 44 weeks post infectionwith SIVmac23922312P,5Q,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72I,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110S,111V,112D,116Q,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY59920081035USAgenomic RNAmonkey 81035 at 28.5 weeks postinfection with SIVmac23922312P,5Q,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72I,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110S,111V,112D,116Q,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY61149085013USAgenomic RNAmonkey 85013 at 58 weeks post infectionwith SIVmac23922312P,5Q,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,48A,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72V,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110ST,111IV,112D,116Q,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY60024987082USAgenomic RNAmonkey 87082 at 32 weeks post infectionwith SIVmac23922312P,5Q,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72I,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110S,111V,112D,116Q,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY58701587801USAgenomic RNAisolated 17 weeks post infection22312P,5Q,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72I,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110S,111V,112D,116Q,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY60395992050USAgenomic RNAmonkey 92050 at 38 weeks post infectionwith SIVmac23922312P,5Q,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72I,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110S,111V,112D,116Q,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY59920192077USAgenomic RNAmonkey 92077 at 31 weeks post infectionwith SIVmac23922312P,5Q,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72I,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110S,111V,112D,116Q,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY61149293057USAgenomic RNAmonkey 93057 at 68 weeks post infectionwith SIVmac23922312P,5Q,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,48I,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72V,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110S,111A,112D,116Q,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY60770493062USAgenomic RNAmonkey 93062 at 44 weeks post infectionwith SIVmac23922312P,5Q,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72I,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110S,111V,112D,116Q,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY61149495058USAgenomic RNAmonkey 95058 at 89 weeks post infectionwith SIVmac23922312P,5Q,6V,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,48I,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72IV,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110S,111A,112E,116Q,118T,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY60770395086USAgenomic RNAmonkey 95086 at 44 weeks post infectionwith SIVmac23922312P,5Q,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72I,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110S,111V,112D,116Q,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY60770196016USAgenomic RNAmonkey 96016 at 39 weeks post infectionwith SIVmac23922312P,5Q,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72I,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110S,111V,112D,116Q,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY61148896020USAgenomic RNAmonkey 96020at 57 weeks post infectionwith SIVmac23922312P,5Q,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72I,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110S,111V,112D,116Q,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY61149196072USAgenomic RNAmonkey 96072 at 67 weeks post infectionwith SIVmac23922312P,5Q,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72I,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110S,111V,112D,116Q,120D,122S,128N,131R,135Q,136ILM,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY59720996081USAgenomic RNAmonkey 96081 at 26 weeks post infectionwith SIVmac23922312P,5Q,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72I,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110S,111V,112D,116Q,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY61148996093USAgenomic RNAmonkey 96093 at 64 weeks post infectionwith SIVmac23922312P,5Q,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72I,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110S,111V,112D,116Q,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY61148796123USAgenomic RNAmonkey 96123 at 45 weeks post infectionwith SIVmac23922312P,5Q,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72I,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110S,111V,112D,116Q,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY60770296135USAgenomic RNAmonkey 96135 at 40 weeks post infectionwith SIVmac23922312P,5Q,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72I,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110S,111V,112D,116Q,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY59919997009USAgenomic RNAmonkey 97009 at 28 weeks post infectionwith SIVmac23922312P,5Q,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72I,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110S,111V,112D,116Q,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,166V,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY59919897074USAgenomic RNAmonkey 97074 at 28 weeks post infectionwith SIVmac23922312P,5Q,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72I,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110S,111V,112D,116Q,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY576480r80025USAgenomic RNAmonkey r80025 at 14 weeks postinfection with SIVmac23922312P,5Q,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72I,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110S,111V,112D,116Q,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY576481r90131USAgenomic RNAmonkey r90131 at 16 weeks postinfection with SIVmac23922312P,5Q,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72I,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110S,111V,112D,116Q,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY588945SIVmac239USAgenomic RNArhesus macaque 96114 at 22 weeks postinfection22312P,5Q,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72I,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110S,111V,112D,116Q,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M
AY588946SIVmac239USAgenomic RNArhesus macaque 95112 at 22 weeks postinfection22312P,5Q,7G,9N,10Y,13L,14P,15L,26L,27I,31K,33G,34A,37V,39G,41Q,47C,50Y,52I,54Q,58C,61D,68I,69I,70R,71D,72I,79D,82L,83Q,86Q,87P,89P,90Q,91~,92~,93Q,96L,100S,110S,111V,112D,116Q,120D,122S,128N,131R,135Q,139Q,141C,146N,149N,153V,154K,162Q,163S,171S,177T,178D,179A,180A,187Q,191I,200L,201V,204G,207V,208N,209P,215L,226Q,230L,231M

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