<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Amogne (2016) Phylogenetic Analysis of Ethiopian HIV-1 Subtype C Near Full-Length Genomes Reveals High Intrasubtype Diversity and a Strong Geographical Cluster AIDS Res. Hum. Retroviruses (2016) In press 4.8e-149 24          

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
KU319528ET104Ethiopia2008genomic RNAsubtype: C12316L,14P,15L,27I,31G,33N,41T,71D,83L,87Q,91V,96L,110N,116A,120H,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KU319529ET106Ethiopia2008genomic RNAsubtype: C12316L,14S,15L,27I,31G,41T,71D,83L,91A,96L,110N,115V,116A,120A,124V,128D,148V,154K,169F,178T,180D,203R,208G,210S
KU319530ET108Ethiopia2008genomic RNAsubtype: C12316L,14P,15L,27I,41T,71D,79D,83L,87Q,96I,110S,116T,120G,148V,154K,169F,178T,180D,187D,203R,208G,210S
KU319531ET115Ethiopia2008genomic RNAsubtype: C12316L,15L,27I,36I,41T,68I,71D,83L,110N,115V,116A,120A,124V,128D,148V,154K,169F,177G,178T,187D,203R,208G
KU319532ET119Ethiopia2008genomic RNAsubtype: C12316A,11I,14S,15L,27I,54M,58I,71D,83L,91V,92P,111P,120S,128D,148V,154K,169F,178T,180D,187D,191I,199R,200N,203R,208G
KU319533ET122Ethiopia2008genomic RNAsubtype: C12316M,14S,15L,27I,41T,68I,71D,83L,86A,91V,115V,116A,120S,124V,128D,132K,136M,148V,154K,169F,177C,178T,180D,203R,208G,210S,211V
KU319534ET124Ethiopia2008genomic RNAsubtype: C12316L,14S,15L,27I,36I,41T,71D,83L,91V,110N,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KU319535ET126Ethiopia2008genomic RNAsubtype: C12316V,14P,27I,41T,71D,116A,124V,148V,154K,169F,178T,180D,187D,203R,208G
KU319536ET128Ethiopia2008genomic RNAsubtype: C12316L,27I,41T,71D,83L,116A,120S,128D,148V,154K,169F,178A,180D,187D,191T,203R,208G
KU319537ET130Ethiopia2008genomic RNAsubtype: C12316L,7R,14P,15L,27I,31G,33N,41T,71D,83L,110N,115V,116A,120G,123A,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
KU319538ET135Ethiopia2008genomic RNAsubtype: C12316L,41T,71D,91V,98D,116A,120S,124V,148V,153V,169F,170R,171I,174D,178T,180D,187D,203R,204G,208G,210S
KU319539ET136Ethiopia2008genomic RNAsubtype: C12316L,27I,33N,36I,41T,71D,83L,86A,87Q,91V,96I,116T,120S,124V,128D,148V,154K,169F,178T,180D,203R,208G
KU319540ET145Ethiopia2008genomic RNAsubtype: C12316L,15L,27I,41T,71D,83L,116A,120G,124V,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KU319541ET147Ethiopia2008genomic RNAsubtype: C12316L,15L,27I,41T,52I,71D,116A,120S,124V,132K,148V,154K,169F,178T,180D,187D,200N,203R,208G,210S
KU319542ET148Ethiopia2008genomic RNAsubtype: C12316L,14S,15L,27I,41T,71D,83I,116N,120S,124V,148V,154K,169F,178T,180D,187D,203R,208G,210S
KU319543ET149Ethiopia2008genomic RNAsubtype: C12316L,27I,41T,71D,83L,86I,91A,116A,120G,124V,128D,148V,169F,178T,188S,190M,203R,208G
KU319544ET150Ethiopia2008genomic RNAsubtype: C12313L,4N,6L,7R,13P,14T,19I,21D,22G,27I,30E,31V,33T,36I,37L,39L,41T,42V,71D,83L,91V,116A,120G,124V,128D,148V,154K,169F,171V,178T,180D,187D,203R,210S
KU319545ET154Ethiopia2008genomic RNAsubtype: C12316P,11I,14S,27I,41T,50H,75D,83L,91V,102T,116A,120S,124V,148V,154K,169F,171V,178T,180D,183V,187D,203R,208G
KU319546ET155Ethiopia2008genomic RNAsubtype: C12312V,3L,4H,6P,7L,11L,12Y,13G,14N,15L,18K,19N,21S,23R,24I,25L,28W,33N,34Q,35K,37L,39L,40Y,41T,45Y,46R,53T,54P,56E,57H,71D,83L,87Q,91V,112A,116A,120S,124V,128D,148V,154K,169F,171I,178T,187D,200S,208G,210S
KU319547ET159Ethiopia2008genomic RNAsubtype: C12316L,15L,41T,71D,83M,87Q,92P,96I,116Q,120S,148V,154K,169F,171V,177S,180D,187D,191I,207S,208G,210S
KU319548ET164Ethiopia2008genomic RNAsubtype: C12316L,14P,15L,27I,31G,33N,41T,71D,91V,116N,120G,124V,148V,154K,169F,170R,178T,180D,187D,203R,208G,225S
KU319549ET165Ethiopia2008genomic RNAsubtype: C12316L,14P,15L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,169F,170R,178T,180D,187D,203R,208G
KU319550ET167Ethiopia2008genomic RNAsubtype: C12316L,14S,15L,27I,41T,71D,75D,83L,115V,116A,120S,124V,128D,148V,154K,169F,177S,187D,203R,208G,210S,225S
KU319551ET171Ethiopia2008genomic RNAsubtype: C12316L,14P,15L,27I,41T,71D,83L,86A,87Q,91V,96I,116T,120S,148V,169F,178T,187D,203R,208G,225S

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