Genbank References: capsid (p24)

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Genbank References: capsid (p24)

Authors	Title	Citation	E-value	# in Gb	#Pts	ART	Source	Cloning	StudyType
Winckelmann (2016)	Peripheral blood cells contribute to HIV-1 viremia induced by romidepsin	Virus Evol. 2017 Mar 5;3(Suppl 1):vew036.004.	1.99e-162	246	6	ART	Plasma; PBMC	SGS	Reservoir

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Accession	IsolateName	Country	Coll Date	MolType	Note	FirstAA	LastAA	MutList
KX840928	REA05p_Baseline_DNA_1	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840929	REA05p_Baseline_DNA_10	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,148V,178T,208G,225S
KX840930	REA05p_Baseline_DNA_12	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840931	REA05p_Baseline_DNA_13	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840932	REA05p_Baseline_DNA_14	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,148V,178T,208G,225S
KX840933	REA05p_Baseline_DNA_16	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,61R,83L,91V,148V,178T,208G,225S
KX840934	REA05p_Baseline_DNA_19	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,148V,178T,208G,225S
KX840935	REA05p_Baseline_DNA_2	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840936	REA05p_Baseline_DNA_20	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,148V,208G,225S
KX840937	REA05p_Baseline_DNA_24	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840938	REA05p_Baseline_DNA_25	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840939	REA05p_Baseline_DNA_28	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840940	REA05p_Baseline_DNA_29	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840941	REA05p_Baseline_DNA_30	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,148V,178T,208G,225S
KX840942	REA05p_Baseline_DNA_31	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840943	REA05p_Baseline_DNA_33	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840944	REA05p_Baseline_DNA_34	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840945	REA05p_Baseline_DNA_37	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6F,15L,27I,83L,91V,148V,178T,208G,225S
KX840946	REA05p_Baseline_DNA_38	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840947	REA05p_Baseline_DNA_42	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,148V,178T,208G,225S
KX840948	REA05p_Baseline_DNA_43	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840949	REA05p_Baseline_DNA_49	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,148V,178T,208G,225S
KX840950	REA05p_Baseline_DNA_51	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,148V,178T,208G,225S
KX840951	REA05p_Baseline_DNA_54	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6F,15L,27I,83L,91V,148V,178T,208G,225S
KX840952	REA05p_Baseline_DNA_55	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840953	REA05p_Baseline_DNA_57	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,148V,178T,208G,225S
KX840954	REA05p_Baseline_DNA_6	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840955	REA05p_Baseline_DNA_60	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840956	REA05p_Baseline_DNA_7	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,148V,178T,208G,225S
KX840957	REA05p_Baseline_DNA_9	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840958	REA05p_Followup_DNA_10	Denmark	23-Jun-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,148V,178T,208G,225S
KX840959	REA05p_Followup_DNA_12	Denmark	23-Jun-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840960	REA05p_Followup_DNA_14	Denmark	23-Jun-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840961	REA05p_Followup_DNA_15	Denmark	23-Jun-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840962	REA05p_Followup_DNA_16	Denmark	23-Jun-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840963	REA05p_Followup_DNA_17	Denmark	23-Jun-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,143K,148V,178T,208G,214I,225S
KX840964	REA05p_Followup_DNA_19	Denmark	23-Jun-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840965	REA05p_Followup_DNA_2	Denmark	23-Jun-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,148V,178T,208G,225S
KX840966	REA05p_Followup_DNA_20	Denmark	23-Jun-2014	genomic DNA	subtype: B	4	231	6L,7R,15L,27I,83L,91V,148V,178T,208G,225S
KX840967	REA05p_Followup_DNA_23	Denmark	23-Jun-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840968	REA05p_Followup_DNA_3	Denmark	23-Jun-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840969	REA05p_Followup_DNA_4	Denmark	23-Jun-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,148V,178T,208G,225S
KX840970	REA05p_Followup_DNA_5	Denmark	23-Jun-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840971	REA05p_Followup_DNA_6	Denmark	23-Jun-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,148V,178T,208G,225S
KX840972	REA05p_Followup_DNA_7	Denmark	23-Jun-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,86A,91V,148V,178T,208G,225S
KX840973	REA05p_Followup_DNA_8	Denmark	23-Jun-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840974	REA05p_Followup_DNA_9	Denmark	23-Jun-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,148V,178T,208G,225S
KX840975	REA05p_Timepoint1_DNA_10	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,148V,178T,208G,225S
KX840976	REA05p_Timepoint1_DNA_11	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840977	REA05p_Timepoint1_DNA_13	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840978	REA05p_Timepoint1_DNA_14	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,148V,178T,208G,225S
KX840979	REA05p_Timepoint1_DNA_15	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840980	REA05p_Timepoint1_DNA_16	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,148V,178T,208G,225S
KX840981	REA05p_Timepoint1_DNA_17	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840982	REA05p_Timepoint1_DNA_19	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840983	REA05p_Timepoint1_DNA_20	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840984	REA05p_Timepoint1_DNA_22	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,148V,208G,225S
KX840985	REA05p_Timepoint1_DNA_24	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840986	REA05p_Timepoint1_DNA_27	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840987	REA05p_Timepoint1_DNA_29	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840988	REA05p_Timepoint1_DNA_3	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,148V,208G,225S
KX840989	REA05p_Timepoint1_DNA_33	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840990	REA05p_Timepoint1_DNA_34	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840991	REA05p_Timepoint1_DNA_35	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,148V,178T,208G,225S
KX840992	REA05p_Timepoint1_DNA_37	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840993	REA05p_Timepoint1_DNA_4	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840994	REA05p_Timepoint1_DNA_40	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,148V,178T,208G,225S
KX840995	REA05p_Timepoint1_DNA_41	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840996	REA05p_Timepoint1_DNA_42	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840997	REA05p_Timepoint1_DNA_5	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX840998	REA05p_Timepoint1_DNA_7	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,148V,178T,208G,225S
KX840999	REA05p_Timepoint1_DNA_8	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX841000	REA05p_Timepoint1_DNA_9	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX841001	REA05p_Timepoint2_DNA_12	Denmark	22-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,148V,178T,208G,225S
KX841002	REA05p_Timepoint2_DNA_13	Denmark	22-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX841003	REA05p_Timepoint2_DNA_14	Denmark	22-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX841004	REA05p_Timepoint2_DNA_17	Denmark	22-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,148V,178T,208G,225S
KX841005	REA05p_Timepoint2_DNA_18	Denmark	22-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX841006	REA05p_Timepoint2_DNA_19	Denmark	22-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,148V,178T,208G,225S
KX841007	REA05p_Timepoint2_DNA_3	Denmark	22-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,148V,178T,208G,225S
KX841008	REA05p_Timepoint2_DNA_4	Denmark	22-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,49S,83L,91V,148V,178T,208G,225S
KX841009	REA05p_Timepoint2_DNA_9	Denmark	22-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX841010	REA05p_Timepoint3_DNA_1	Denmark	15-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX841011	REA05p_Timepoint3_DNA_2	Denmark	15-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX841012	REA05p_Timepoint3_DNA_3	Denmark	15-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,137E,148V,178T,206E,208G,225S
KX841013	REA05p_Timepoint3_DNA_4	Denmark	15-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,148V,178T,208G,225S
KX841014	REA05p_Timepoint3_DNA_5	Denmark	15-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX841015	REA05p_Timepoint3_DNA_7	Denmark	15-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,110S,148V,178T,208G,225S
KX841016	REA05p_Timepoint3_DNA_8	Denmark	15-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX841017	REA05p_Timepoint3_DNA_9	Denmark	15-Apr-2014	genomic DNA	subtype: B	4	231	6L,15L,27I,83L,91V,148V,178T,208G,225S
KX841018	REA06p_Baseline_CRNA_1	Denmark	01-Apr-2014	genomic RNA	subtype: B	4	231	79A,83L,91V,152E,225S
KX841019	REA06p_Baseline_CRNA_2	Denmark	01-Apr-2014	genomic RNA	subtype: B	4	231	83L,91V,116A,152E,170R,225S
KX841020	REA06p_Baseline_CRNA_3	Denmark	01-Apr-2014	genomic RNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841021	REA06p_Baseline_CRNA_5	Denmark	01-Apr-2014	genomic RNA	subtype: B	4	231	83L,152E,225S
KX841022	REA06p_Baseline_CRNA_6	Denmark	01-Apr-2014	genomic RNA	subtype: B	4	231	83L,152E,225S
KX841023	REA06p_Baseline_DNA_10	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	83L,152E,225S
KX841024	REA06p_Baseline_DNA_11	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841025	REA06p_Baseline_DNA_12	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841026	REA06p_Baseline_DNA_14	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841027	REA06p_Baseline_DNA_15	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841028	REA06p_Baseline_DNA_16	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	27I,83L,148I,152E,225S
KX841029	REA06p_Baseline_DNA_18	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	15V,83L,152E,225S
KX841030	REA06p_Baseline_DNA_19	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	83L,152E,225S
KX841031	REA06p_Baseline_DNA_20	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	83L,152E,154K,225S
KX841032	REA06p_Baseline_DNA_21	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841033	REA06p_Baseline_DNA_25	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	41T,83L,91V,152E,225S
KX841034	REA06p_Baseline_DNA_26	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	83L,152E,154K,225S
KX841035	REA06p_Baseline_DNA_27	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841036	REA06p_Baseline_DNA_28	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841037	REA06p_Baseline_DNA_29	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	27I,83L,148I,152E,225S
KX841038	REA06p_Baseline_DNA_3	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841039	REA06p_Baseline_DNA_30	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	83L,152E,225S
KX841040	REA06p_Baseline_DNA_31	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	83L,91V,152E,225S
KX841041	REA06p_Baseline_DNA_32	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841042	REA06p_Baseline_DNA_33	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	83L,152E,154K,225S
KX841043	REA06p_Baseline_DNA_36	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	83L,91V,116A,152E,170R,225S
KX841044	REA06p_Baseline_DNA_37	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	83L,152E,154K,225S
KX841045	REA06p_Baseline_DNA_5	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	83L,152E,154K,225S
KX841046	REA06p_Baseline_DNA_6	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	83L,91V,131Q,152E,225S
KX841047	REA06p_Baseline_DNA_8	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841048	REA06p_Baseline_DNA_9	Denmark	01-Apr-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841049	REA06p_Followup_CRNA_1	Denmark	25-Jun-2014	genomic RNA	subtype: B	4	231	83L,152E,154K,225S
KX841050	REA06p_Followup_CRNA_2	Denmark	25-Jun-2014	genomic RNA	subtype: B	4	231	83L,91V,152E,170R,225S
KX841051	REA06p_Followup_CRNA_20	Denmark	25-Jun-2014	genomic RNA	subtype: B	4	231	27I,83L,116A,148I,152E,225S
KX841052	REA06p_Followup_CRNA_21	Denmark	25-Jun-2014	genomic RNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841053	REA06p_Followup_CRNA_4	Denmark	25-Jun-2014	genomic RNA	subtype: B	4	231	83L,152E,154K,225S
KX841054	REA06p_Followup_CRNA_5	Denmark	25-Jun-2014	genomic RNA	subtype: B	4	231	83L,152E,154K,225S
KX841055	REA06p_Followup_CRNA_6	Denmark	25-Jun-2014	genomic RNA	subtype: B	4	231	83L,91V,152E,225S
KX841056	REA06p_Followup_CRNA_7	Denmark	25-Jun-2014	genomic RNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841057	REA06p_Followup_DNA_12	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	83L,152E,225S
KX841058	REA06p_Followup_DNA_13	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841059	REA06p_Followup_DNA_14	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	83L,149C,152E,154K,225S
KX841060	REA06p_Followup_DNA_16	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	27I,83L,91V,148I,152E,225S
KX841061	REA06p_Followup_DNA_18	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841062	REA06p_Followup_DNA_19	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	27I,83L,91V,148I,152E,225S
KX841063	REA06p_Followup_DNA_2	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841064	REA06p_Followup_DNA_20	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841065	REA06p_Followup_DNA_21	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	83L,152E,225S
KX841066	REA06p_Followup_DNA_23	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	27I,83L,91V,148I,152E,225S
KX841067	REA06p_Followup_DNA_25	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841068	REA06p_Followup_DNA_26	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841069	REA06p_Followup_DNA_29	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841070	REA06p_Followup_DNA_3	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841071	REA06p_Followup_DNA_30	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	83L,152E,225S
KX841072	REA06p_Followup_DNA_32	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	27I,83L,91V,148I,152E,225S
KX841073	REA06p_Followup_DNA_35	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841074	REA06p_Followup_DNA_37	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841075	REA06p_Followup_DNA_38	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	27I,83L,91V,148I,152E,225S
KX841076	REA06p_Followup_DNA_39	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841077	REA06p_Followup_DNA_4	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	83L,152E,225S
KX841078	REA06p_Followup_DNA_40	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	68T,83L,116A,152E,170R,225S
KX841079	REA06p_Followup_DNA_6	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841080	REA06p_Followup_DNA_7	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	83L,91V,152E,225S
KX841081	REA06p_Followup_DNA_9	Denmark	25-Jun-2014	genomic DNA	subtype: B	4	231	83L,152E,154K,225S
KX841082	REA06p_Timepoint1_CRNA_1	Denmark	08-Apr-2014	genomic RNA	subtype: B	4	231	83L,91V,152E,225S
KX841083	REA06p_Timepoint1_CRNA_2	Denmark	08-Apr-2014	genomic RNA	subtype: B	4	231	83L,91V,152E,225S
KX841084	REA06p_Timepoint1_CRNA_3	Denmark	08-Apr-2014	genomic RNA	subtype: B	4	231	27I,83L,91V,148I,152E,225S
KX841085	REA06p_Timepoint1_DNA_1	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	27I,83L,91V,148I,152E,225S
KX841086	REA06p_Timepoint1_DNA_4	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841087	REA06p_Timepoint1_DNA_5	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	83L,152E,154K,225S
KX841088	REA06p_Timepoint1_DNA_6	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	83L,116A,152E,170R,225S
KX841089	REA07p_Baseline_CRNA_2	Denmark	08-Apr-2014	genomic RNA	subtype: B	4	231	6M,14P,27I,91V,148V,180D
KX841090	REA07p_Baseline_CRNA_3	Denmark	08-Apr-2014	genomic RNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841091	REA07p_Baseline_DNA_1	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,91V,148V,180D
KX841092	REA07p_Baseline_DNA_2	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841093	REA07p_Baseline_DNA_3	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841094	REA07p_Baseline_DNA_5	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841095	REA07p_Baseline_DNA_6	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841096	REA07p_Baseline_DNA_9	Denmark	08-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,41T,83L,91V,148V,180D
KX841097	REA07p_Followup_CRNA_1	Denmark	27-Jun-2014	genomic RNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841098	REA07p_Followup_DNA_1	Denmark	27-Jun-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841099	REA07p_Followup_DNA_2	Denmark	27-Jun-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841100	REA07p_Followup_DNA_3	Denmark	27-Jun-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841101	REA07p_Followup_DNA_4	Denmark	27-Jun-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841102	REA07p_Followup_DNA_7	Denmark	27-Jun-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,91V,148V,180D
KX841103	REA07p_Followup_DNA_8	Denmark	27-Jun-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841104	REA07p_Followup_DNA_9	Denmark	27-Jun-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,91V,148V,180D
KX841105	REA07p_PreART_CRNA_1	Denmark	19-Nov-2008	genomic RNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841106	REA07p_PreART_CRNA_101	Denmark	19-Nov-2008	genomic RNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841107	REA07p_PreART_CRNA_102	Denmark	19-Nov-2008	genomic RNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841108	REA07p_PreART_CRNA_104	Denmark	19-Nov-2008	genomic RNA	subtype: B	4	231	6M,14P,27I,41T,83L,91V,148V,180D
KX841109	REA07p_PreART_CRNA_105	Denmark	19-Nov-2008	genomic RNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841110	REA07p_PreART_CRNA_106	Denmark	19-Nov-2008	genomic RNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841111	REA07p_PreART_CRNA_107	Denmark	19-Nov-2008	genomic RNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841112	REA07p_PreART_CRNA_108	Denmark	19-Nov-2008	genomic RNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841113	REA07p_PreART_CRNA_109	Denmark	19-Nov-2008	genomic RNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841114	REA07p_PreART_CRNA_110	Denmark	19-Nov-2008	genomic RNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,170R,180D
KX841115	REA07p_PreART_CRNA_111	Denmark	19-Nov-2008	genomic RNA	subtype: B	4	231	6M,14P,27I,83L,86I,91V,148V,180D
KX841116	REA07p_PreART_CRNA_112	Denmark	19-Nov-2008	genomic RNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841117	REA07p_PreART_CRNA_2	Denmark	19-Nov-2008	genomic RNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841118	REA07p_PreART_DNA_1	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,41T,83L,91V,148V,180D
KX841119	REA07p_PreART_DNA_102	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841120	REA07p_PreART_DNA_103	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D,200I
KX841121	REA07p_PreART_DNA_105	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841122	REA07p_PreART_DNA_107	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841123	REA07p_PreART_DNA_108	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841124	REA07p_PreART_DNA_109	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,52S,83L,91V,148V,168L,180D
KX841125	REA07p_PreART_DNA_11	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,170R
KX841126	REA07p_PreART_DNA_110	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,170R,180D
KX841127	REA07p_PreART_DNA_111	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841128	REA07p_PreART_DNA_113	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841129	REA07p_PreART_DNA_114	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,149N,180D
KX841130	REA07p_PreART_DNA_116	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D,230I
KX841131	REA07p_PreART_DNA_13	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841132	REA07p_PreART_DNA_14	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,41T,83L,91V,148V,180D
KX841133	REA07p_PreART_DNA_15	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841134	REA07p_PreART_DNA_16	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841135	REA07p_PreART_DNA_17	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,170R,180D
KX841136	REA07p_PreART_DNA_18	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,98K,118I,148V,180D
KX841137	REA07p_PreART_DNA_2	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841138	REA07p_PreART_DNA_20	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,81N,83L,91V,148V,180D
KX841139	REA07p_PreART_DNA_3	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,170R,180D
KX841140	REA07p_PreART_DNA_5	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841141	REA07p_PreART_DNA_6	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841142	REA07p_PreART_DNA_8	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D,230I
KX841143	REA07p_PreART_DNA_9	Denmark	19-Nov-2008	genomic DNA	subtype: B	4	231	6M,14P,27I,54I,83L,91V,148V,170R,180D
KX841144	REA07p_Timepoint1_CRNA_1	Denmark	15-Apr-2014	genomic RNA	subtype: B	4	231	6M,14P,27I,41T,83L,91V,148V,180D
KX841145	REA07p_Timepoint1_CRNA_2	Denmark	15-Apr-2014	genomic RNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841146	REA07p_Timepoint1_DNA_1	Denmark	15-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841147	REA07p_Timepoint1_DNA_10	Denmark	15-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841148	REA07p_Timepoint1_DNA_12	Denmark	15-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841149	REA07p_Timepoint1_DNA_13	Denmark	15-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841150	REA07p_Timepoint1_DNA_14	Denmark	15-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841151	REA07p_Timepoint1_DNA_16	Denmark	15-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841152	REA07p_Timepoint1_DNA_18	Denmark	15-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841153	REA07p_Timepoint1_DNA_19	Denmark	15-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,170R,180D
KX841154	REA07p_Timepoint1_DNA_2	Denmark	15-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841155	REA07p_Timepoint1_DNA_3	Denmark	15-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841156	REA07p_Timepoint1_DNA_4	Denmark	15-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,57I,79K,83L,91V,148V,180D
KX841157	REA07p_Timepoint1_DNA_5	Denmark	15-Apr-2014	genomic DNA	subtype: B	4	231	6L,14P,27I,83L,91V,148V,180D,198Y
KX841158	REA07p_Timepoint1_DNA_6	Denmark	15-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,170R,180D
KX841159	REA07p_Timepoint1_DNA_7	Denmark	15-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,75D,83L,91V,148V,180D
KX841160	REA07p_Timepoint1_DNA_8	Denmark	15-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,91V,148V,180D
KX841161	REA07p_Timepoint1_DNA_9	Denmark	15-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841162	REA07p_Timepoint2_CRNA_1	Denmark	29-Apr-2014	genomic RNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841163	REA07p_Timepoint2_DNA_2	Denmark	29-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,41T,83L,91V,148V,180D
KX841164	REA07p_Timepoint2_DNA_3	Denmark	29-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841165	REA07p_Timepoint2_DNA_4	Denmark	29-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,170R,180D
KX841166	REA07p_Timepoint2_DNA_5	Denmark	29-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841167	REA07p_Timepoint2_DNA_6	Denmark	29-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,83L,91V,148V,180D
KX841168	REA07p_Timepoint2_DNA_7	Denmark	29-Apr-2014	genomic DNA	subtype: B	4	231	6M,14P,27I,66R,91V,148V,180D
KX841169	REA07p_Timepoint2_PRNA_1	Denmark	18-Apr-2014	genomic RNA	subtype: B	4	231	6M,14P,27I,91V,148V,180D
KX841170	REA07p_Timepoint2_PRNA_2	Denmark	18-Apr-2014	genomic RNA	subtype: B	4	231	6M,14P,27I,91V,148V,180D
KX841171	REA07p_Timepoint2_PRNA_3	Denmark	18-Apr-2014	genomic RNA	subtype: B	4	231	6M,14P,27I,91V,148V,180D
KX841172	REA07p_Timepoint3_PRNA_1	Denmark	25-Apr-2014	genomic RNA	subtype: B	4	231	6M,14P,27I,91V,148V,180D
KX841173	REA07p_Timepoint3_PRNA_2	Denmark	25-Apr-2014	genomic RNA	subtype: B	4	231	6M,14P,27I,91V,148V,180D

Genbank References: capsid (p24)

Database

Resources

Team