<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Feng (2013) The rapidly expanding CRF01_AE epidemic in China is driven by multiple lineages of HIV-1 viruses introduced in the 1990s AIDS 27 (11), 1793-1802 (2013) 1.19e-146 75 75 Naive Plasma Direct PCR Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
JX112796CYM059China: Beijing07-Jan-2010genomic DNAsubtype: CRF01_AE12316A,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,110N,116A,128D,148V,178T,200S,207T,208G,225S,229K
JX112797CYM075China: Beijing07-Jan-2010genomic DNAsubtype: CRF01_AE12316A,10P,14P,15V,31G,54M,58I,79D,83T,87Q,92P,96I,116A,148V,178T,200S,207T,208G,225S
JX112798CYM105China: Beijing12-Jan-2010genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,71D,83L,92P,124L,128D,148V,149G,204S,207T,208G,225S
JX112799CYM124China: Beijing19-Jan-2010genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,116A,128D,148V,178T,200S,207S,208G,225S
JX112800CYM136China: Beijing21-Jan-2010genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,116A,128D,148V,178T,200S,207T,208G,225S
JX112801CYM138China: Beijing21-Jan-2010genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,79D,83T,87P,92P,96I,116A,128D,148V,178T,200S,207T,208G,225S
JX112802CYM139China: Beijing22-Jan-2010genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,47S,54M,58I,79D,83T,86A,87Q,91L,92P,96L,116A,178T,200S,207S,208G
JX112803CYM140China: Beijing22-Jan-2010genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,116A,128D,148V,178T,204S,207T,208G
JX112804CYM143China: Beijing22-Jan-2010genomic DNAsubtype: CRF01_AE12316A,14S,31G,33N,54M,58I,87Q,92P,96L,115V,120S,128D,148V,149G,200S,207T,208G,225S
JX112805CYM147China: Beijing22-Jan-2010genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,79D,83T,92P,96I,116A,128D,148V,154K,178T,204S,207T,208G,225S
JX112806CYM149China: Beijing22-Jan-2010genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,116A,128D,148V,178T,200S,203R,207A,208G,225S
JX112807CYM152China: Beijing26-Jan-2010genomic DNAsubtype: CRF01_AE12316A,10P,15V,31G,33N,54M,58I,83T,87Q,92P,96I,116A,128D,148V,178T,200S,207T,208G,225S
JX112808CYM154China: Beijing26-Jan-2010genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,75D,79D,83T,87Q,92P,96I,116A,120S,128D,148V,178T,200S,207T,208G,225S
JX112809FJ070010China: Fujian20-Jun-2007genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,92P,110N,120S,128D,148V,178T,204S,207T,208G,225S
JX112810FJ070013China: Fujian20-Jun-2007genomic DNAsubtype: CRF01_AE12316A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,177D,178T,190I,194V,197E,200S,207T,208G,225S
JX112811FJ070017China: Fujian20-Jun-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX112812FJ070018China: Fujian28-Jun-2007genomic DNAsubtype: CRF01_AE12316A,10L,14P,15L,31G,33N,54M,58I,92Q,110N,128D,148V,178T,200S,207T,208G,225S
JX112813FJ070033China: Fujian20-Jun-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,78V,83T,92P,124V,128D,148V,178T,200S,225S
JX112814FJ070035China: Fujian20-Jun-2007genomic DNAsubtype: CRF01_AE12316T,14P,15L,31G,33N,54M,58I,92P,123S,128D,148V,178T,200S,207T,208G,225S
JX112815FJ070037China: Fujian20-Jun-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,172I,178T,194E,200S,207T,208G,225S
JX112816FJ070039China: Fujian20-Jun-2007genomic DNAsubtype: CRF01_AE12316A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX112817FJ070040China: Fujian20-Jun-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,87Q,92P,96L,148V,178T,200S,207T,208G,225S
JX112818FJ070043China: Fujian28-Jun-2007genomic DNAsubtype: CRF01_AE12316A,11T,14S,15L,31G,33N,54M,58I,92P,120S,123A,128D,148V,154K,178T,200S,207T,208G,225S
JX112819GD070010China: Guangdong16-Aug-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,210N,225S
JX112820GD070058China: Guangdong16-Aug-2007genomic DNAsubtype: CRF01_AE12316A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,110N,128D,148V,149G,200S,207T,208G,225S
JX112821GD070059China: Guangdong16-Aug-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,79D,92P,128D,148V,178T,200S,203R,207S,208G,225S
JX112822GD070083China: Guangdong16-Jul-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX112823GD070090China: Guangdong23-Jul-2007genomic DNAsubtype: CRF01_AE12316A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX112824GD070092China: Guangdong23-Jul-2007genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54V,58I,92P,120S,128D,146R,148V,154K,178T,200S,207T,208G,225S
JX112825GD070096China: Guangdong23-Jul-2007genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,92P,120S,123A,128D,148V,178T,200S,207T,208G,225S
JX112826GD070118China: Guangdong04-Jul-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,87Q,92P,96I,110N,116A,128D,148V,178T,200S,207T,208G,225S
JX112827GD070120China: Guangdong02-Aug-2007genomic DNAsubtype: CRF01_AE12316T,14P,15L,31G,33N,54M,58I,83L,92P,120G,123A,128D,148V,178T,200S,207I,208G,225S
JX112828GD070176China: Guangdong11-Jul-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX112829GX070003China: Guangxi16-May-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX112830GX070005China: Guangxi17-May-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,67H,68I,72V,91N,92P,93A,115L,116A,128D,148V,178T,200S,207T,208G,225S
JX112831GX070006China: Guangxi22-May-2007genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX112832GX070043China: Guangxi07-Aug-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX112833GX070044China: Guangxi08-Aug-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,45D,54M,58I,92P,124V,128D,148V,178T,200S,203R,207A,208G,225S
JX112834GX070076China: Guangxi11-Aug-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,83I,92P,110N,120S,128D,148V,178T,190V,200S,207M,208G,225S
JX112835GX070143China: Guangxi27-Sep-2007genomic DNAsubtype: CRF01_AE12316A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,149G,200S,207T,208G,225S
JX112836GX070145China: Guangxi09-Oct-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
JX112837GX070149China: Guangxi22-Oct-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX112838GX070154China: Guangxi08-Nov-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX112839GX070167China: Guangxi08-Nov-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,178T,200S,207T,208G,225S
JX112840GZ070004China: Guizhou19-Jul-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,128D,178T,200S,207T,208G,225S
JX112841GZ070015China: Guizhou22-Jul-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,178T,200S,207T,208G,225S
JX112842GZ070016China: Guizhou06-Sep-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,79D,83T,92P,128D,148V,178T,200S,207T,208G,225S
JX112843GZ070123China: Guizhou22-Aug-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,83L,92P,110N,120G,123A,128D,148V,178T,183H,200S,207T,208G,225S
JX112844GZ070126China: Guizhou12-Sep-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207S,208Q,225S
JX112845GZ070127China: Guizhou12-Sep-2007genomic DNAsubtype: CRF01_AE12316A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX112846JL100005China: Jilin29-Jun-2010genomic DNAsubtype: CRF01_AE12312V,6A,14P,15V,31G,33N,54M,58I,71D,92P,120S,148V,149G,154K,178T,200S,207T,208G,225S
JX112847JL100007China: Jilin29-Jun-2010genomic DNAsubtype: CRF01_AE12316A,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX112848JL100014China: Jilin30-Jun-2010genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,87Q,92P,120S,148V,149G,178T,200S,207T,208G,225S
JX112849JL100020China: Jilin30-Jun-2010genomic DNAsubtype: CRF01_AE12316A,14S,15L,31G,33N,54M,58I,86A,87Q,92P,96L,120S,128D,148V,149G,200S,207T,208G
JX112850JS070901China: Jiangsu22-May-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,61E,83L,92P,110N,146K,148V,178T,200S,208G,225S
JX112851JS071001China: Jiangsu21-May-2007genomic DNAsubtype: CRF01_AE12316A,14S,15L,31G,33N,54M,58I,92P,110N,120S,128D,148V,149G,177V,178T,190V,200S,207T,208G,225S
JX112852JS071004China: Jiangsu21-May-2007genomic DNAsubtype: CRF01_AE12316A,10P,15V,31G,33N,54M,58I,83T,87Q,92P,96I,116A,128D,148V,178T,200S,207T,208G,225S
JX112853JS071101China: Jiangsu17-May-2007genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,116A,120S,128D,148V,178T,200S,207T,208G,225S
JX112854LN070008China: Liaoning16-Jul-2007genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,41T,54M,58I,92P,120S,128D,135V,148V,178T,200S,207T,208G,225S
JX112855LN070010China: Liaoning16-Jul-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,120S,148V,149G,178T,200S,207T,208G,225S
JX112856LN070013China: Liaoning17-Jul-2007genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,87Q,92P,96L,148V,149G,200S,207Q,208G,225S
JX112857SC070062China: Sichuan03-Dec-2006genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX112858SC070064China: Sichuan03-Dec-2006genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,178T,195I,200S,207T,208G,225S
JX112859TJ070003China: Tianjin18-Jun-2007genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,116A,128D,148V,178T,200S,207T,208G
JX112860YN0203China: Yunnan04-Jun-2002genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,64G,92P,96L,148V,149G,200S,207T,208G,225S
JX112861YN0221China: Yunnan04-Jun-2002genomic DNAsubtype: CRF01_AE12316A,14S,15L,31G,33N,49R,54M,58I,87Q,92P,107S,120S,123A,128D,148V,178T,200S,207Q,208G,210S
JX112862YN0225China: Yunnan04-Jun-2002genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,64G,92P,96L,108S,120G,148V,149G,178T,200S,207T,208G,225S
JX112863YN0229China: Yunnan04-Jun-2002genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,71D,92P,128D,148V,149G,178T,200S,207T,208G,225S
JX112864YN0232China: Yunnan04-Jun-2002genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,71D,92P,120S,123S,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX112865YN0235China: Yunnan04-Jun-2002genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,64G,87Q,92P,96L,120S,148V,149G,178T,200S,207T,208G,225S
JX112866YN0236China: Yunnan04-Jun-2002genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,71D,92P,128D,148V,149G,200S,207T,208G,225S
JX112867YN09P0011China: Yunnan27-May-2009genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,104V,120S,148V,178T,200S,207T,208G,225S
JX112868YN09P0015China: Yunnan27-May-2009genomic DNAsubtype: CRF01_AE12316A,14P,31G,33N,54M,58I,92P,128D,148V,149G,178T,199R,200S,207T,208G,225S
JX112869ZK052China: Hunan14-Oct-2009genomic DNAsubtype: CRF01_AE12316S,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,201T,207I,208G,225S
JX112870ZK056China: Hunan14-Oct-2009genomic DNAsubtype: CRF01_AE12316A,14P,31G,33N,54M,58I,79D,83T,92P,96I,116A,128D,148V,178T,200S,207T,208G,225S

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