<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Serwanga (2012) Profile of T Cell Recognition of HIV Type 1 Consensus Group M Gag and Nef Peptides in a Clade A1- and D-Infected Ugandan Population AIDS Res. Hum. Retroviruses 28 (4), 384-392 (2012) 1.03e-166 46 50 Naive PBMC Direct PCR HLA

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
HQ702686UG002Uganda2008genomic DNAfemale patient12316L,14N,15L,41T,46GR,83L,87Q,91V,98D,110NT,116A,120S,148V,180D,183I,184G,190V,195I,208G
HQ702687UG003Uganda2008genomic DNAmale patient12316A,15V,27I,54M,58I,71D,83L,86A,91V,111P,116A,120A,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G,225S
HQ702688UG005Uganda2008genomic DNAfemale patient12313IV,6A,11I,14S,15L,27I,54M,58I,71D,83I,111T,116A,120G,131R,148V,154K,169F,178T,180D,191I,200S,203R,207A,208G
HQ702689UG006Uganda2008genomic DNAfemale patient12316L,15L,41ST,50G,59I,83T,91V,96L,111H,115L,116Q,128DE,131*K,148V,180D,192QR,208G,210S,225S
HQ702690UG007Uganda2008genomic DNAfemale patient123114P,15L,41T,50S,59I,83L,91V,110N,120S,148V,180D,225S
HQ702691UG009Uganda2008genomic DNAmale patient12316L,83L,91V,116A,120S,148V,180D,225S
HQ702692UG010Uganda2008genomic DNA12312V,4P,15V,27I,30R,31G,48L,54M,58I,83L,87Q,92P,96L,128D,148V,154K,169F,170R,178T,183G,203R,207E,208W,209N,210E,211P
HQ702693UG014Uganda2008genomic DNAmale patient22312K,5K,9R,14N,21D,27I,54M,58I,111P,115L,116A,120G,148V,195I,200S,207T,208G
HQ702694UG015Uganda2008genomic DNAfemale patient12316L,15L,27I,83L,91N,96L,116A,148V,178T,209T,225S
HQ702696UG016Uganda2008genomic DNAfemale patient12316L,15L,27I,41T,83L,87Q,91V,96I,110S,116T,120S,148V,167P,180D,189W,190W,210S,225S
HQ702695UG017Uganda2008genomic DNAfemale patient12312Y,3MV,6L,23Y,27I,28I,29G,30R,31S,33N,41T,54S,83L,91V,116T,120S,148V
HQ702697UG018Uganda2008genomic DNAfemale patient12316A,11I,15L,31G,45G,46R,48I,52F,54M,57Y,58I,71D,83L,92P,111P,128D,148V,154K,169F,171A,178T,180D,183G,200S,203R,207S,208G
HQ702698UG019Uganda2008genomic DNAfemale patient12316L,14P,27I,41T,83L,91A,120S,148V,180D,205F,225S
HQ702699UG020Uganda2008genomic DNAfemale patient12315S,6A,10P,11I,15L,27I,31G,48I,54M,58I,59I,71D,83L,86A,91V,111P,128D,148V,154K,169F,183S,200F,203R
HQ702700UG021Ugandagenomic DNA12316L,11I,15L,18K,19P,27I,41A,83L,120G,124T,148V,208G
HQ702701UG022Uganda2008genomic DNAfemale patient12316L,14P,27I,41T,83L,91A,120S,148V,180D,225S
HQ702702UG023Uganda2008genomic DNAmale patient12316L,27I,83L,91N,96I,116A,120S,148V,180D
HQ702703UG024Uganda2008genomic DNAfemale patient12316L,27I,41A,83L,120G,124T,148V,205W,208G
HQ702704UG025Uganda2008genomic DNAmale patient12316A,11I,15L,27I,31G,54M,58I,71D,83L,92P,111P,116A,120G,123A,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G,227W
HQ702705UG026Uganda2008genomic DNAfemale patient12315K,6C,10L,11I,12Q,14N,15W,31V,43V,50H,54M,58I,68I,71D,83L,90H,92P,120S,128D,132K,148V,154K,169F,178T,200S,203R,207A,208G,225S
HQ702706UG027Uganda2008genomic DNAmale patient12315T,6L,15L,27I,83L,116A,148V,180D,225S
HQ702707UG028Uganda2008genomic DNAfemale patient12316A,11I,41T,71D,83L,91A,115V,116A,120S,148V,169F,171A,178T,180D,187D,203R,204G,208G,210S,216I,225S
HQ702708UG031Uganda2008genomic DNAfemale patient12316L,14P,27I,50G,83L,91V,116A,120S,128D,148V,180D,188ST,225S
HQ702709UG032Uganda2008genomic DNAfemale patient12316L,15L,21H,27I,50S,54S,58A,83L,110N,116A,128D,148V,154K,160S,199N,225S
HQ702710UG033Uganda2008genomic DNAmale patient12316L,27I,50G,83L,116A,120S,128D,148V,180D
HQ702711UG034Uganda2008genomic DNAfemale patient12316A,11I,14G,15V,27I,30R,31G,54M,58I,71D,83L,92P,111P,128D,148V,154K,169F,171V,178T,183G,200S,203R,207S,208G,225S
HQ702712UG035Uganda2008genomic DNAfemale patient12316L,21H,27I,50H,63L,67R,74Y,76R,83I,91V,110S,120S,148V,180D,225S
HQ702713UG037Uganda2008genomic DNAfemale patient12316A,11T,15L,27I,41T,68I,71D,83L,91V,110N,116A,128D,148V,154K,169F,178T,180D,187D,200N,207Q,208G
HQ702714UG038Uganda2008genomic DNAmale patient12316L,14S,15L,27I,29K,40C,41T,57D,83L,110S,120S,148V,199R,225S
HQ702715UG040Uganda2008genomic DNAfemale patient12315D,11I,15L,27I,30R,31G,48L,54M,58I,71D,83L,92P,111P,118T,120G,128D,148V,154K,169F,178T,183D,187D,200S,203R,208G
HQ702716UG042Uganda2008genomic DNAmale patient12316L,15L,27I,50S,83L,87Q,91Q,116A,120S,148V,180D,225S
HQ702717UG043Uganda2008genomic DNAfemale patient123127I,41T,83L,87Q,110N,120S,148V,187D,208G
HQ702718UG044Uganda2008genomic DNAfemale patient12316L,27I,83L,91V,98D,120S,148V,149G,178T,208G
HQ702719UG046Uganda2008genomic DNAfemale patient12316A,11I,14P,15L,29G,31G,54M,58I,71D,83L,91V,92P,111T,120G,121A,128D,148V,154K,169F,177C,178T,183G,187D,191I,200S,203R,207S,208G
HQ702720UG047Uganda2008genomic DNAfemale patient12316A,11I,12Y,15L,30R,31G,54M,58I,83L,86AV,87Q,92P,96L,111P,115V,148V,154K,169F,178T,183G,203R,208G
HQ702721UG051Uganda2008genomic DNAfemale patient12316A,11I,14PS,15V,27I,28G,54M,58I,71D,83L,111P,116A,120G,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G
HQ702722UG052Uganda2008genomic DNAfemale patient12316A,11I,14P,15F,24I,31G,54M,58I,71D,83L,92P,111T,120S,128D,148V,154K,169F,178T,183G,191I,200S,203R,207S,208G,225S
HQ702723UG054Uganda2008genomic DNAfemale patient12316A,11IV,14G,15V,27I,31G,58I,71D,83L,92P,111P,115V,128D,148V,154K,169F,178T,183G,187D,200S,203R,208G,225S
HQ702724UG055Uganda2008genomic DNAmale patient123115V,25E,27I,31G,48I,54M,58I,59I,71D,83L,86A,91V,92Q,111P,128D,148V,154K,169F,178T,183G,200S,203R,208G,210S
HQ702725UG056Uganda2008genomic DNAfemale patient12316L,12Y,14V,15M,27I,30I,36I,41A,50H,54AS,58IT,83L,96MV,113DE,120S,124V,128DE,141V,148V,154KR,159AE,170KR,178ST,180*E,187DE,225S
HQ702726UG058Uganda2008genomic DNAmale patient12316A,9AV,11T,12HY,15L,30R,31G,48I,54M,58I,71D,83L,92P,111P,118MT,120S,123PS,128D,148V,154K,169F,178T,183DG,187D,200S,203R,208G,225S
HQ702727UG059Uganda2008genomic DNAfemale patient12316L,15L,26G,27I,35D,41T,52F,76G,83L,87Q,110S,120R,131N,137L,138W,139T,142E,143S,144R,148N,149G,152A,153L,154W,157L,158Y,160H,161Y,162I,165I,167H,168K,170E,171P,174D,176L,178T,179H,180A,182Q,184S,190Q,191L,192H,195D,197N,199E,201V,203T,208T,213D,225R
HQ702728UG060Uganda2008genomic DNAfemale patient12316A,14N,15L,27I,50S,54V,58V,71D,83L,92P,110N,111I,120S,128D,148V,154K,169F,170R,178T,183G,187D,200S,203R,208G,210S,225S
HQ702729UG061Uganda2008genomic DNAmale patient12316A,11I,15L,27I,30R,31G,54M,58I,71D,83L,92P,111P,128D,148V,154K,169F,178T,183G,200G,203R,207S,208G
HQ702730UG062Uganda2008genomic DNAfemale patient12316L,14S,15L,27I,54L,120S,148V,180D,199R,225S
HQ702731UG065Uganda2008genomic DNAfemale patient12316A,9A,11M,15L,27I,31G,33N,54M,58I,71D,111T,116A,120G,128D,148V,154K,169F,177C,178T,183G,200S,203R,207T,208G

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