<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Giandhari (2015) Genetic Changes in HIV-1 Gag-Protease Associated with Protease Inhibitor-Based Therapy Failure in Pediatric Patients AIDS Res. Hum. Retroviruses 31 (8), 776-782 (2015) 2.17e-162 40 40 Mixed Plasma Direct PCR Miscellaneous

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
KP0561642005_ZA_3018BSouth Africa31-Aug-2005genomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,91V,116A,124V,128D,148V,154K,160L,169F,178T,180D,187D,203R,208G,210S
KP0561652005_ZA_5014BSouth Africa26-May-2005genomic DNAsubtype: C12316L,27I,41T,71D,83L,91V,96I,116T,120G,124V,128D,148V,154K,169F,178T,180D,203R,210S
KP0561662005_ZA_5045BSouth Africa10-Aug-2005genomic DNAsubtype: C12312V,6L,27I,41T,50S,71D,93A,96I,116T,120S,148V,163G,169F,178T,187D,203R,208G,225S
KP0561672005_ZA_5046BSouth Africa01-Aug-2005genomic DNAsubtype: C12316L,15L,27I,41T,71D,83L,116A,120S,128D,148V,169F,178T,180D,203R,208G
KP0561682005_ZA_5050BSouth Africa12-Aug-2005genomic DNAsubtype: C12316L,14T,15L,27I,31G,33N,41T,71D,83L,87Q,92P,96I,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,200M,203R,204G,207Q,208G,225S,228S
KP0561692005_ZA_5079BSouth Africa26-Sep-2005genomic DNAsubtype: C12316L,44A,71D,83L,116A,120S,148V,153V,154K,169F,171I,178T,180D,187D,191L,200I,204G,208G,210S,225S
KP0561702005_ZA_5080BSouth Africa23-Sep-2005genomic DNAsubtype: C12316A,12Y,15L,27I,31N,41T,71D,83L,91V,96L,111P,116A,128D,148V,154K,169F,178T,180D,187D,203R,208G
KP0561712005_ZA_5086BSouth Africa12-Oct-2005genomic DNAsubtype: C12316L,27I,41T,71D,83L,86A,87Q,91V,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
KP0561722005_ZA_5094BSouth Africa20-Oct-2005genomic DNAsubtype: C12316A,13T,14P,15L,16T,27I,31N,41T,71D,83L,91V,110S,116A,120S,128D,148V,154K,169F,178T,179A,180D,187D,203R,204G,207Q,208G,210S
KP0561732006_ZA_3018FSouth Africa14-Sep-2006genomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,91V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
KP0561742006_ZA_3059BSouth Africa28-Sep-2006genomic DNAsubtype: C12316A,14P,27I,33N,41T,71D,83T,110N,116A,120S,128D,148A,154K,169F,178T,180D,187D,203R,208G,225S
KP0561752006_ZA_5014FSouth Africa22-Jun-2006genomic DNAsubtype: C12316L,27I,41T,71D,83I,91V,96I,107A,116T,120S,124V,128D,148V,154K,169F,178T,180D,203R,210S
KP0561762006_ZA_5045FSouth Africa31-May-2006genomic DNAsubtype: C12316L,27I,41A,71D,87Q,93A,96I,116T,120S,148V,169F,178T,187D,203R,208G,225S
KP0561772006_ZA_5046FSouth Africa07-Aug-2006genomic DNAsubtype: C12316L,15L,27I,41T,71D,83L,116A,120S,128D,148V,169F,178T,180D,203R,208G
KP0561782006_ZA_5050FSouth Africa14-Sep-2006genomic DNAsubtype: C12316L,14T,15L,27I,31G,33N,41T,71D,83L,87Q,92P,96I,110N,115V,116Q,120S,128D,148V,154K,169F,178T,180D,187D,200M,203R,204G,207Q,208G,225S
KP0561792006_ZA_5079FSouth Africa28-Jun-2006genomic DNAsubtype: C12316L,44A,71D,83L,116A,120S,148V,153V,154K,169F,171I,178T,180D,187D,191L,200I,204G,208G,210S,225S
KP0561802006_ZA_5080FSouth Africa28-Sep-2006genomic DNAsubtype: C12316A,12Y,15L,27I,31N,41T,71D,83L,91V,96L,111P,116A,128D,148V,154K,169F,178T,180D,187D,188A,203R,208G
KP0561812006_ZA_5086FSouth Africa17-Oct-2006genomic DNAsubtype: C12316L,27I,41T,71D,83L,86A,87Q,91V,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
KP0561822006_ZA_5094FSouth Africa05-Jul-2006genomic DNAsubtype: C12316A,13T,14P,15L,16T,27I,31N,41T,71D,83L,91V,102G,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
KP0561832006_ZA_5117BSouth Africa06-Jan-2006genomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,160S,169F,178T,187D,203R,208G,210S,225A
KP0561842006_ZA_5166BSouth Africa06-Oct-2006genomic DNAsubtype: C12316L,14P,15L,27I,41T,71D,83L,91A,120S,148V,154K,169F,178T,180D,187D,203R,208G
KP0561852006_ZA_5175BSouth Africa23-Oct-2006genomic DNAsubtype: C12316L,12Y,14N,27I,41T,71D,83L,111P,112A,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
KP0561862006_ZA_5210BSouth Africa20-Dec-2006genomic DNAsubtype: C12316L,27I,41T,71D,83L,120S,128D,148V,154K,169F,178T,180D,203R,204T,208G
KP0561872007_ZA_3059FSouth Africa27-Jun-2007genomic DNAsubtype: C12316A,14P,27I,33N,41T,71D,83T,110N,116A,120S,128D,131R,134V,148V,154K,160T,169F,178T,180D,187D,203R,208G,225S
KP0561882007_ZA_5117FSouth Africa11-Jan-2007genomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,160S,169F,178T,187D,203R,208G,210S
KP0561892007_ZA_5166FSouth Africa21-Jul-2007genomic DNAsubtype: C12316L,14P,15L,16L,27I,41T,71D,83L,91V,120S,148V,154K,169F,178T,180D,187D,203R,208G
KP0561902007_ZA_5175FSouth Africa11-Jul-2007genomic DNAsubtype: C12316L,12Y,14N,27I,41T,71D,83L,111P,112A,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
KP0561912007_ZA_5198BSouth Africa03-Jan-2007genomic DNAsubtype: C12316L,27I,41T,50K,71D,83L,91V,116N,120S,128D,148V,154K,169F,178T,183G,187D,203R,208G,210S,225S
KP0561922007_ZA_5198FSouth Africa19-Sep-2007genomic DNAsubtype: C12316L,27I,41T,71D,83L,91V,116N,120S,128D,148V,154K,169F,178T,183G,187D,203R,208G,210S,225S
KP0561932007_ZA_5207BSouth Africa29-Jan-2007genomic DNAsubtype: C12316L,14P,15L,27I,31N,41T,58S,71D,83L,110N,116A,120G,122Q,148V,154K,160S,169F,171V,180D,187D,210S,225S
KP0561942007_ZA_5207FSouth Africa07-Sep-2007genomic DNAsubtype: C12316L,14P,15L,27I,31N,41T,59I,71D,83L,110N,116A,120G,124V,148V,154K,163E,169F,171V,178T,180D,187D,208G,210S,225S
KP0561952007_ZA_5228BSouth Africa09-Mar-2007genomic DNAsubtype: C12316L,14P,15L,27I,31G,33N,41T,52M,59I,71D,72A,83L,86P,87Q,91V,96I,98D,107A,110N,116T,128D,148V,154K,169F,178T,180D,203R,208G,210S,225S
KP0561962007_ZA_5228FSouth Africa10-Aug-2007genomic DNAsubtype: C12316L,14P,15L,27I,31G,33N,41T,52M,59I,71D,83L,86P,87Q,91V,96I,98D,107A,110N,116T,128D,148V,154K,169F,178T,180D,203R,207Q,208G,225S
KP0561972007_ZA_5242BSouth Africa18-Apr-2007genomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,86A,87Q,91F,92P,93A,96I,98D,116A,120G,123A,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
KP0561982007_ZA_5242FSouth Africa18-Jul-2007genomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,86A,87Q,91F,92P,93A,96I,98D,116A,120G,123A,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
KP0561992007_ZA_5245BSouth Africa20-Apr-2007genomic DNAsubtype: C12316L,27I,41T,71D,83L,96L,116A,122N,124V,128D,148V,169F,178T,187D,200N,203R,207A,208G,225S
KP0562002007_ZA_5245FSouth Africa20-Jul-2007genomic DNAsubtype: C12316L,27I,41T,71D,83L,96L,116A,122N,124V,128D,143K,148V,149N,169F,178T,187D,200N,203R,208G,209S,225S
KP0562012007_ZA_5251BSouth Africa16-May-2007genomic DNAsubtype: C12316L,14S,15L,27I,33N,36I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KP0562022008_ZA_5251FSouth Africa06-Feb-2008genomic DNAsubtype: C12316L,14S,15L,27I,33N,36I,41T,71D,83L,87Q,91V,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
KP0562032009_ZA_5210FSouth Africa13-Jan-2009genomic DNAsubtype: C12316L,27I,41T,71D,83I,120S,128D,148V,154K,169F,178T,180D,203R,208G

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