<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Alves (2019) Estimating HIV-1 Genetic Diversity in Brazil Through Next-Generation Sequencing Front Microbiol 10, 1-11 (2019) 2.03e-164 25 25 Uncertain PBMC NGS Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
MK04156610HU-UFRJ-2016Brazil201610F_ABCDgenomic DNAwhole bloodsubtype: B123183L,91V,148V,180D,194S
MK04156912HU-FURG-2017Brazil201712S_Agenomic DNAwhole bloodsubtype: C12316L,14S,27I,36I,41T,71D,91V,120S,128D,148V,154K,163E,169F,178T,180D,187D,203R,208G
MK04156812HU-UFRJ-2016Brazil201612F_ABCDgenomic DNAwhole bloodsubtype: B123127I,83L,87Q,120S,148V
MK04157113HU-FURG-2017Brazil201713S_Agenomic DNAwhole bloodsubtype: C12316L,14S,15M,17A,27I,41T,71D,83L,91A,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S,230I
MK04157314HI-2016Brazil201614HI_ABCDgenomic DNAwhole bloodsubtype: B12316L,14P,27I,33N,44A,52I,87Q,96I,116T,120S,132K,136M,143K,148V,178T
MK04157516HI-2016Brazil201616HI_ABCDgenomic DNAwhole bloodsubtype: B12316L,28K,35K,51N,75K,76K,81N,83L,86A,87Q,96I,101E,116T,117*,118I,128K,132K,133*,137E,143K,152N,154K,162K,163N,166N,173K,178T,183A,184*,185I,206E,212K,214I,215I
MK04157717HI-2016Brazil201617HI_ABCDgenomic DNAwhole bloodsubtype: URF_BF112312V,6T,12Y,14S,15L,44A,71D,72S,83L,87Q,92P,96I,107A,110S,116Q,120G,124V,136I,148V,154K,169F,178T,183G,187D,191I,208G
MK04157817HI-2016c1Brazil201617HI_CONTIG1genomic DNAwhole blood12312V,6T,12Y,14S,15L,44A,71D,72S,83L,87Q,92P,96I,107A,110S,116Q,120G,124V,136I,148V,154K,169F,178T,183G,187D,191I,208G
MK04157917HI-2016c2Brazil201617HI_CONTIG2genomic DNAwhole blood12316M,83L,120H,225S
MK04158418HI-2016Brazil201618HI_ABCDgenomic DNAwhole bloodsubtype: B12316L,27I,41T,83L,180D,207T,208G,225T,230I
MK04158619HI-2016Brazil201619HI_ABCDgenomic DNAwhole bloodsubtype: B12316L,14P,27I,41T,83L,86P,87Q,98D,120S,124V,146C,148V,154K,170R,178T,208G,225A
MK0415501HU-FURG-2017Brazil20171S_ABCDgenomic DNAwhole bloodsubtype: C12316L,14P,16T,17A,27I,41T,71D,72A,83L,91V,96I,116T,120S,124M,131T,132K,136M,140R,143K,148V,154K,169F,178T,203R,208G,225S
MK04158720HI-2016Brazil201620HI_ABCgenomic DNAwhole bloodsubtype: B12316L,15L,41A,45D,83L,120S,124V,148S,154K,160S
MK04158922HI-2016Brazil201622HI_ABCDgenomic DNAwhole bloodsubtype: B12316L,50G,59I,83L,86P,87Q,120S,128D,154K,178T
MK0415522HU-FURG-2017Brazil20172S_Agenomic DNAwhole bloodsubtype: C12316M,14P,15V,41T,50S,68I,71D,72A,83L,91V,96I,116T,120S,124V,132K,135V,140R,154K,169F,178T,180D,187D,203R,208G,210S
MK0415512HU-UFRJ-2016Brazil20162F_ABCDgenomic DNAwhole bloodsubtype: B12316L,27I,83L,86P,87Q,91V,98D,116N,120S,148V,178T
MK0415553HU-FURG-2017Brazil20173S_ABCgenomic DNAwhole bloodsubtype: URF_BC12312V,6L,27I,41T,68I,71D,83L,116A,120S,124V,128D,148V,154K,169F,178T,180D,194S,203R,208G,210S,211I,225S
MK0415574HI-2016Brazil20164HI_Agenomic DNAwhole bloodsubtype: B12316L,50S,83L,128D,208G,216S,225S,230I
MK0415564HU-UFRJ-2016Brazil20164F_ABCDgenomic DNAwhole bloodsubtype: B12316L,187D,208G
MK0415616HU-FURG-2017Brazil20176S_ABCDgenomic DNAwhole bloodsubtype: C12316V,11I,14P,17A,41T,71D,72A,91V,96I,116T,120S,124V,148V,154K,169F,178T,180D,203R,207Q,208G
MK0415596HU-UFRJ-2016Brazil20166F_ABCDgenomic DNAwhole bloodsubtype: B12316L,27I,83L,86A,87Q,96I,116T,148I,210S,225S
MK0415637HU-FURG-2017Brazil20177S_ABCDgenomic DNAwhole bloodsubtype: C12316L,23*,27I,41T,60R,71D,80*,83T,91V,96I,100K,116A,124V,128D,133*,137R,148V,169F,170R,178T,184*,203R,206R,208E,210N
MK0415627HU-UFRJ-2016Brazil20167F_ABCDgenomic DNAwhole bloodsubtype: B12316L,15M,44A,54S,83L,107V,136M,148V,180D,208S,210S,225S
MK0415648HU-FURG-2017Brazil20178S_ABCDgenomic DNAwhole bloodsubtype: C123114P,17A,27I,41T,71D,83L,91V,110N,116A,120S,124V,128D,148V,154K,169F,178T,187D,203R,208G,225S
MK0415659HU-UFRJ-2016Brazil20169F_ABCDgenomic DNAwhole bloodsubtype: F112316L,27I,71D,80*,83I,86S,87Q,91F,92P,96L,97K,98D,116Q,120S,124V,148V,154K,169F,178T,183G,187D,200L,204S,208G,210S

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