Genbank References: capsid (p24)

Authors	Title	Citation	E-value	# in Gb	#Pts	ART	Source	Cloning	StudyType
Rolland (2017)	Increased HIV-1 vaccine efficacy against viruses with genetic signatures in Env V2	Nature 490 (7420), 417-420 (2012)	8.38e-155	1018	110	Naive	Plasma	SGS	Molecular epidemiology

Download sequences

Accession	IsolateName	Country	Coll Date	Clone	MolType	Source	Note	FirstAA	LastAA	MutList
JX446654	AA001a02L	Thailand	2008		genomic RNA	plasma AA001a	subtype: CRF01_AE	1	231	6S,14P,15V,31G,33N,58I,72A,92P,120S,128D,148I,178T,200S,207T,208G
JX446653	AA001a03L	Thailand	2008		genomic RNA	plasma AA001a	subtype: CRF01_AE	1	231	6S,14P,15V,31G,33N,58I,72A,92P,120S,148I,178T,200S,207T,208G,225S
JX446652	AA001a05L	Thailand	2008		genomic RNA	plasma AA001a	subtype: CRF01_AE	1	231	6S,14P,15V,31G,33N,58I,72A,92P,120S,128D,148I,178T,200S,207T,208G
JX446649	AA001a08L	Thailand	2008		genomic RNA	plasma AA001a	subtype: CRF01_AE	1	231	6S,14P,15V,31G,33N,58I,72A,92P,120S,128D,148I,178T,200S,207T,208G
JX446645	AA001a10L	Thailand	2008		genomic RNA	plasma AA001a	subtype: CRF01_AE	1	231	6S,14P,15V,31G,33N,58I,72A,92P,120S,128D,148I,178T,200S,207T,208G,225S
JX446646	AA001a11L	Thailand	2008		genomic RNA	plasma AA001a	subtype: CRF01_AE	1	231	6S,14P,15V,31G,33N,58I,72A,92P,120S,128D,148I,178T,200S,207T,208G
JX446647	AA001a12L	Thailand	2008		genomic RNA	plasma AA001a	subtype: CRF01_AE	1	231	6S,14P,15V,31G,33N,58I,72A,92P,120S,128D,148I,178T,200S,207T,208G,225S
JX446648	AA001a13L	Thailand	2008		genomic RNA	plasma AA001a	subtype: CRF01_AE	1	231	6S,14P,15V,31G,33N,58I,72A,92P,120S,128D,148V,178T,200S,207T,208G
JX446651	AA001a14L	Thailand	2008		genomic RNA	plasma AA001a	subtype: CRF01_AE	1	231	6S,14P,15V,31G,33N,58I,68I,72A,92P,120S,128D,148I,178T,200S,207T,208G,225S
JX446650	AA001a15L	Thailand	2008		genomic RNA	plasma AA001a	subtype: CRF01_AE	1	231	6S,14P,15V,31G,33N,58I,72A,92P,120S,128D,148V,178T,200S,207T,208G
JX446667	AA002a_LH12	Thailand	2006		genomic RNA	plasma AA002a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,112P,120S,128D,148V,178T,200S,207S,208G,210S,225S,227KR
JX446668	AA002a_LH13	Thailand	2006		genomic RNA	plasma AA002a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,112P,120S,128D,148V,178T,200S,207S,208G,210S,225S
JX446669	AA002a_LH14	Thailand	2006		genomic RNA	plasma AA002a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,112P,115L,120S,128D,148V,178T,200S,207S,208G,210S,225S
JX446670	AA002a_LH15	Thailand	2006		genomic RNA	plasma AA002a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,112P,115L,120S,128D,148V,178T,200S,207S,208G,210S,225S
JX446671	AA002a_LH2_	Thailand	2006		genomic RNA	plasma AA002a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,112P,115L,120S,128D,148V,178T,200S,207S,208G,210S,225S
JX446672	AA002a_LH25	Thailand	2006		genomic RNA	plasma AA002a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,112L,120S,128D,148V,178T,200S,207S,208G,210S,225S
JX446673	AA002a_LH26	Thailand	2006		genomic RNA	plasma AA002a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,112P,120S,128D,148V,178T,200S,207S,208G,210S,225S
JX446674	AA002a_LH3	Thailand	2006		genomic RNA	plasma AA002a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,112P,115L,120S,128D,148V,178T,200S,207S,208G,210S,225S
JX446666	AA002a_WG1	Thailand	2006		genomic RNA	plasma AA002a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,112P,115L,120S,128D,148V,178T,200S,207S,208G,210S,225S
JX446697	AA003b02L	Thailand	2006		genomic RNA	plasma AA003b	subtype: CRF01_AE	1	231	6A,9H,14S,15L,31G,33N,54M,58I,87Q,92P,96I,116T,128D,148V,178T,200S,207T,208G,225S
JX446692	AA003b03L	Thailand	2006		genomic RNA	plasma AA003b	subtype: CRF01_AE	1	231	6A,9H,14S,15L,31G,33N,54M,58I,87Q,92P,96I,116T,128D,148V,176R,178T,200S,207T,208G,225S
JX446693	AA003b04L	Thailand	2006		genomic RNA	plasma AA003b	subtype: CRF01_AE	1	231	6A,15V,31G,33N,54M,58I,83I,87Q,92P,96I,116T,128D,148V,178T,200S,207T,208G,225S
JX446694	AA003b05L	Thailand	2006		genomic RNA	plasma AA003b	subtype: CRF01_AE	1	231	6A,9H,14S,15L,31G,33N,54M,58I,87Q,92P,96I,116T,128D,148V,178T,200S,207T,208G,225S
JX446695	AA003b06L	Thailand	2006		genomic RNA	plasma AA003b	subtype: CRF01_AE	1	231	6A,15V,31G,33N,54M,58I,87Q,92P,96I,116T,128D,148V,178T,200S,207T,208G,225S
JX446685	AA003b09L	Thailand	2006		genomic RNA	plasma AA003b	subtype: CRF01_AE	1	231	6A,9H,14S,15L,31G,33N,54M,58I,87Q,92P,96I,116T,128D,148V,178T,200S,207T,208G,225S
JX446686	AA003b10L	Thailand	2006		genomic RNA	plasma AA003b	subtype: CRF01_AE	1	231	6A,15V,31G,33N,54M,58I,83I,87Q,92P,96I,114HQ,116T,128D,148V,178T,200S,207T,208G,225S
JX446696	AA003b11L	Thailand	2006		genomic RNA	plasma AA003b	subtype: CRF01_AE	1	231	6A,15V,31G,33N,54M,58I,83I,87Q,92P,96I,116T,128D,148V,178T,200S,207T,208G,225S
JX446691	AA003b12L	Thailand	2006		genomic RNA	plasma AA003b	subtype: CRF01_AE	1	231	6A,15V,31G,33N,54M,58I,83I,87Q,92P,96I,116T,128D,148V,178T,200S,207T,208G,225S
JX446690	AA003b14L	Thailand	2006		genomic RNA	plasma AA003b	subtype: CRF01_AE	1	231	6A,9H,14S,15L,31G,33N,54M,58I,87Q,92P,96I,116T,128D,148V,178T,200S,207T,208G,225S
JX446687	AA003b16L	Thailand	2006		genomic RNA	plasma AA003b	subtype: CRF01_AE	1	231	6A,15V,31G,33N,54M,58I,83I,87Q,92P,96I,116T,128D,148V,178T,200S,207T,208G,225S
JX446689	AA003b17L	Thailand	2006		genomic RNA	plasma AA003b	subtype: CRF01_AE	1	231	6A,9H,14S,15L,29K,31G,33N,54M,58I,87Q,92P,96I,116T,128D,148V,178T,200S,207T,208G,225S
JX446688	AA003b18L	Thailand	2006		genomic RNA	plasma AA003b	subtype: CRF01_AE	1	231	6A,15V,31G,33N,54M,58I,83I,87Q,92P,96I,116T,128D,148V,178T,200S,207T,208G,225S
JX446711	AA004a_wg1	Thailand	2005		genomic RNA	plasma AA004a	subtype: CRF01_AE	1	231	3L,6A,11I,14P,15F,31G,33N,54M,58I,68I,92P,110N,120G,123A,128D,146R,148V,154K,178T,200S,207T,208G,225S
JX446710	AA004a_WG12	Thailand	2005		genomic RNA	plasma AA004a	subtype: CRF01_AE	1	231	3L,6A,11I,14P,15F,31G,33N,54M,58I,68I,92P,110N,120G,123A,128D,146R,148V,154K,178T,200S,207T,208G,225S
JX446713	AA004a_wg2	Thailand	2005		genomic RNA	plasma AA004a	subtype: CRF01_AE	1	231	3L,6A,11I,14P,15F,31G,33N,54M,58I,68I,92P,110N,120G,123A,128D,146R,148V,154K,178T,200S,207T,208G,221X,225S
JX446714	AA004a_wg3	Thailand	2005		genomic RNA	plasma AA004a	subtype: CRF01_AE	1	231	3L,6A,11I,14P,15F,31G,33N,54M,58I,68I,92P,110N,120G,123A,128D,146R,148V,154K,178T,200S,207T,208G,225S
JX446715	AA004a_wg4	Thailand	2005		genomic RNA	plasma AA004a	subtype: CRF01_AE	1	231	3L,6A,11I,14P,15F,31G,33N,54M,58I,68I,92P,110N,120G,123A,128D,146R,148V,154K,178T,200S,207T,208G,225S
JX446712	AA004a_wg4a	Thailand	2005		genomic RNA	plasma AA004a	subtype: CRF01_AE	1	231	3L,6A,11I,14P,15F,31G,33N,54M,58I,68I,92P,110N,120G,123A,128D,146R,148V,154K,178T,200S,207T,208G,225S
JX446716	AA004a_wg5	Thailand	2005		genomic RNA	plasma AA004a	subtype: CRF01_AE	1	231	3L,6A,11I,14P,15F,31G,33N,54M,58I,68I,92P,110N,120G,123A,128D,146R,148V,154K,178T,200S,207T,208G,225S
JX446717	AA004a_wg6	Thailand	2005		genomic RNA	plasma AA004a	subtype: CRF01_AE	1	231	3L,6A,11I,14P,15F,31G,33N,54M,58I,68I,92P,110N,120G,123A,128D,146R,148V,154K,178T,200S,207T,208G,225S
JX446718	AA004a_wg7	Thailand	2005		genomic RNA	plasma AA004a	subtype: CRF01_AE	1	231	3L,6A,11I,14P,15F,31G,33N,54M,58I,68I,92P,110N,120G,123A,128D,146R,148V,154K,178T,200S,207T,208G,225S
JX446719	AA004a_wg8	Thailand	2005		genomic RNA	plasma AA004a	subtype: CRF01_AE	1	231	3L,6A,11I,14P,15F,31G,33N,54M,58I,68I,92P,110N,120G,123A,128D,146R,148V,154K,178T,200S,207T,208G,225S
JX446724	AA005a01L	Thailand	2007		genomic RNA	plasma AA005a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,135V,148V,178T,200S,207T,208G,225S
JX446727	AA005a02L	Thailand	2007		genomic RNA	plasma AA005a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,37T,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX446725	AA005a03L	Thailand	2007		genomic RNA	plasma AA005a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX446723	AA005a04L	Thailand	2007		genomic RNA	plasma AA005a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX446726	AA005a05L	Thailand	2007		genomic RNA	plasma AA005a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX446722	AA005a06L	Thailand	2007		genomic RNA	plasma AA005a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX446721	AA005a07L	Thailand	2007		genomic RNA	plasma AA005a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX446720	AA005a08L	Thailand	2007		genomic RNA	plasma AA005a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX446739	AA006a01L	Thailand	2006		genomic RNA	plasma AA006a	subtype: CRF01_AE	1	231	6A,13S,14P,15L,31G,33N,54M,58I,83I,92P,120S,148V,178T,200S,207T,208G,225S
JX446736	AA006a02	Thailand	2006		genomic RNA	plasma AA006a	subtype: CRF01_AE	1	231	6A,13S,14P,15L,31G,33N,54M,58I,83I,92P,120S,148V,178T,200S,207T,208G,225S
JX446737	AA006a03	Thailand	2006		genomic RNA	plasma AA006a	subtype: CRF01_AE	1	231	6A,13S,14P,15L,31G,33N,54M,58I,83I,92P,120S,148V,178T,200S,207T,208G,225S
JX446740	AA006a03L	Thailand	2006		genomic RNA	plasma AA006a	subtype: CRF01_AE	1	231	6A,13S,14P,15L,31G,33N,54M,58I,83I,92P,120S,148V,170R,178T,200S,207T,208G,225S
JX446741	AA006a04L	Thailand	2006		genomic RNA	plasma AA006a	subtype: CRF01_AE	1	231	6A,13S,14P,15L,31G,33N,54M,58I,83I,92P,120S,148V,178T,200S,207T,208G,225S
JX446742	AA006a05L	Thailand	2006		genomic RNA	plasma AA006a	subtype: CRF01_AE	1	231	6A,13S,14P,15L,31G,33N,54M,58I,83I,92P,120S,148V,178T,200S,207T,208G,225S
JX446743	AA006a06L	Thailand	2006		genomic RNA	plasma AA006a	subtype: CRF01_AE	1	231	6A,13S,14P,15L,31G,33N,54M,58I,83I,92P,110N,120S,148V,178T,200S,207T,208G,225S
JX446744	AA006a07L	Thailand	2006		genomic RNA	plasma AA006a	subtype: CRF01_AE	1	231	6A,13S,14P,15L,31G,33N,54M,58I,83I,92P,120S,148V,178T,200S,207T,208G,225S
JX446738	AA006a08L	Thailand	2006		genomic RNA	plasma AA006a	subtype: CRF01_AE	1	231	6A,13S,14P,15L,31G,33N,54M,58I,83I,92P,120S,148V,178T,200S,207T,208G,225S
JX446746	AA006a09L	Thailand	2006		genomic RNA	plasma AA006a	subtype: CRF01_AE	1	231	6A,13S,14P,15L,31G,33N,54M,58I,83I,92P,120S,148V,178T,200S,207T,208G,225S
JX446745	AA006a10L	Thailand	2006		genomic RNA	plasma AA006a	subtype: CRF01_AE	1	231	6A,13S,14P,15L,31G,33N,54M,58I,83I,92P,120S,148V,178T,200S,207T,208G,225S
JX446755	AA007a_WG1	Thailand	2008		genomic RNA	plasma AA007a	subtype: CRF01_AE	1	231	6A,14P,15L,31S,41T,54M,58I,92P,116A,120S,128D,178T,200A,203R,208G,225S
JX446756	AA007a_WG10	Thailand	2008		genomic RNA	plasma AA007a	subtype: CRF01_AE	1	231	6A,14P,15L,31S,41T,54M,58I,92P,116A,120S,128D,178T,200A,203R,208G,225S
JX446757	AA007a_WG11	Thailand	2008		genomic RNA	plasma AA007a	subtype: CRF01_AE	1	231	6A,14P,15L,31S,41T,54M,58I,92P,116A,120S,128D,178T,200A,203R,208G,225S
JX446758	AA007a_WG12	Thailand	2008		genomic RNA	plasma AA007a	subtype: CRF01_AE	1	231	6A,14P,15L,31S,41T,54M,58I,92P,116A,120S,128D,178T,200A,203R,208G,225S
JX446759	AA007a_WG13	Thailand	2008		genomic RNA	plasma AA007a	subtype: CRF01_AE	1	231	6A,14P,15L,31S,41T,54M,58I,92P,116A,120S,128D,178T,200A,203R,208G,225S
JX446760	AA007a_WG14	Thailand	2008		genomic RNA	plasma AA007a	subtype: CRF01_AE	1	231	6A,14P,15L,31S,41T,54M,58I,92P,116A,120S,128D,178T,200A,203R,208G,225S
JX446761	AA007a_WG2	Thailand	2008		genomic RNA	plasma AA007a	subtype: CRF01_AE	1	231	6A,14P,15L,31S,41T,54M,58I,92P,116A,120S,128D,178T,200A,203R,208G,225S
JX446762	AA007a_WG5	Thailand	2008		genomic RNA	plasma AA007a	subtype: CRF01_AE	1	231	6A,14P,15L,31S,41T,54M,58I,92P,116A,120S,128D,178T,200A,203R,208G,225S
JX446763	AA007a_WG6	Thailand	2008		genomic RNA	plasma AA007a	subtype: CRF01_AE	1	231	6A,14P,15L,31S,41T,54M,58I,92P,116A,120S,128D,178T,200A,203R,208G,225S
JX446764	AA007a_WG7	Thailand	2008		genomic RNA	plasma AA007a	subtype: CRF01_AE	1	231	6A,14P,15L,31S,35EG,41T,54M,58I,92P,116A,120S,128D,178T,200A,203R,208G,225S
JX446765	AA007a_WG9	Thailand	2008		genomic RNA	plasma AA007a	subtype: CRF01_AE	1	231	6A,14P,15L,31S,41T,54M,58I,92P,116A,120S,128D,178T,200A,203R,208G,225S
JX446766	AA008a_LH12	Thailand	2007		genomic RNA	plasma AA008a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,178T,200S,207T,208G,225S
JX446767	AA008a_LH13	Thailand	2007		genomic RNA	plasma AA008a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,178T,200S,207T,208G,225S
JX446768	AA008a_LH14	Thailand	2007		genomic RNA	plasma AA008a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,178T,200S,207T,208G,225S
JX446769	AA008a_LH15	Thailand	2007		genomic RNA	plasma AA008a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,178T,200S,207T,208G,225S
JX446770	AA008a_LH16	Thailand	2007		genomic RNA	plasma AA008a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,178T,200S,207T,208G,225S
JX446771	AA008a_LH17	Thailand	2007		genomic RNA	plasma AA008a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,178T,200S,207T,208G,225S
JX446772	AA008a_LH18	Thailand	2007		genomic RNA	plasma AA008a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,178T,200S,207T,208G,225S
JX446773	AA008a_LH19	Thailand	2007		genomic RNA	plasma AA008a	subtype: CRF01_AE	1	231	6A,11A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,178T,200S,207T,208G,225S
JX446774	AA008a_LH7	Thailand	2007		genomic RNA	plasma AA008a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,178T,200S,207T,208G,225S
JX446789	AA009b01L	Thailand	2007		genomic RNA	plasma AA009b	subtype: CRF01_AE	1	231	6A,15V,31G,33N,54M,58I,83I,92P,110N,120S,128D,148V,178T,200A,207T,208G,225S
JX446788	AA009b02L	Thailand	2007		genomic RNA	plasma AA009b	subtype: CRF01_AE	1	231	6A,15V,31G,33N,54M,58I,83I,92P,110N,120S,128D,148V,178T,200A,207T,208G,225S
JX446787	AA009b03L	Thailand	2007		genomic RNA	plasma AA009b	subtype: CRF01_AE	1	231	6A,15V,31G,33N,54M,58I,83I,92P,110N,120S,128D,148V,178T,200A,207T,208G,225S
JX446786	AA009b04L	Thailand	2007		genomic RNA	plasma AA009b	subtype: CRF01_AE	1	231	6A,15V,31G,33N,54M,58I,83I,92P,110N,120S,128D,148V,178T,200A,207T,208G,225S
JX446785	AA009b05L	Thailand	2007		genomic RNA	plasma AA009b	subtype: CRF01_AE	1	231	6A,15V,31G,33N,54M,58I,83I,92P,110N,120S,128D,148V,178T,200A,207T,208G,225S
JX446795	AA010a_WG1	Thailand	2006		genomic RNA	plasma AA010a	subtype: B	1	231	6L,194S
JX446796	AA010a_WG10	Thailand	2006		genomic RNA	plasma AA010a	subtype: B	1	231	6L,194S
JX446797	AA010a_WG11	Thailand	2006		genomic RNA	plasma AA010a	subtype: B	1	231	6L,194S
JX446798	AA010a_WG12	Thailand	2006		genomic RNA	plasma AA010a	subtype: B	1	231	6L,194S
JX446799	AA010a_WG2	Thailand	2006		genomic RNA	plasma AA010a	subtype: B	1	231	6L,39MT,194S
JX446800	AA010a_WG3	Thailand	2006		genomic RNA	plasma AA010a	subtype: B	1	231	6L,194S
JX446801	AA010a_WG4	Thailand	2006		genomic RNA	plasma AA010a	subtype: B	1	231	6L,194S
JX446802	AA010a_WG5	Thailand	2006		genomic RNA	plasma AA010a	subtype: B	1	231	6L,194S
JX446803	AA010a_WG6	Thailand	2006		genomic RNA	plasma AA010a	subtype: B	1	231	6L,194S
JX446804	AA010a_WG7	Thailand	2006		genomic RNA	plasma AA010a	subtype: B	1	231	6L,194S
JX446805	AA010a_WG8	Thailand	2006		genomic RNA	plasma AA010a	subtype: B	1	231	6L,194S
JX446806	AA010a_WG9	Thailand	2006		genomic RNA	plasma AA010a	subtype: B	1	231	6L,194S
JX446811	AA011a01L	Thailand	2006		genomic RNA	plasma AA011a	subtype: B	1	231	6L,83L,86P,87Q,96I,110N,116T,120S
JX446812	AA011a02L	Thailand	2006		genomic RNA	plasma AA011a	subtype: B	1	231	6L,83L,86P,87Q,96I,110N,116T,120S
JX446813	AA011a03L	Thailand	2006		genomic RNA	plasma AA011a	subtype: B	1	231	6L,83L,86P,87Q,96I,110N,116T,120S,158KR
JX446814	AA011a04L	Thailand	2006		genomic RNA	plasma AA011a	subtype: B	1	231	6L,83L,86P,87Q,96I,110N,116T,120S
JX446815	AA011a05L	Thailand	2006		genomic RNA	plasma AA011a	subtype: B	1	231	6L,83L,86P,87Q,96I,110N,116T,120S
JX446816	AA011a06L	Thailand	2006		genomic RNA	plasma AA011a	subtype: B	1	231	6L,83L,86P,87Q,96I,110N,116T,120S
JX446810	AA011a07L	Thailand	2006		genomic RNA	plasma AA011a	subtype: B	1	231	6L,83L,86P,87Q,96I,110N,116T
JX446807	AA011a09L	Thailand	2006		genomic RNA	plasma AA011a	subtype: B	1	231	6L,83L,86P,87Q,96I,110N,116T
JX446809	AA011a10L	Thailand	2006		genomic RNA	plasma AA011a	subtype: B	1	231	6L,83L,86P,87QR,96I,110N,116T
JX446808	AA011a11L	Thailand	2006		genomic RNA	plasma AA011a	subtype: B	1	231	6L,83L,86P,87Q,96I,110N,116T,197DG
JX446826	AA012a_LH10	Thailand	2007		genomic RNA	plasma AA012a	subtype: CRF01_AE	1	231	6A,15L,31G,33N,54M,58I,92P,110N,128D,146Q,148V,154K,178T,200S,207T,208G,225S
JX446827	AA012a_LH11	Thailand	2007		genomic RNA	plasma AA012a	subtype: CRF01_AE	1	231	6A,15L,31G,33N,54M,58I,92P,110N,128D,146Q,148V,154K,178T,200S,207T,208G,225S
JX446828	AA012a_LH15	Thailand	2007		genomic RNA	plasma AA012a	subtype: CRF01_AE	1	231	6A,15L,31G,33N,54M,58I,92P,110N,128D,146Q,148V,154K,178T,200S,207T,208G,225S
JX446829	AA012a_LH16	Thailand	2007		genomic RNA	plasma AA012a	subtype: CRF01_AE	1	231	6A,15L,31G,33N,54M,58I,92P,110N,128D,146Q,148V,154K,178T,200S,207T,208G,225S
JX446834	AA012a_LH18	Thailand	2007		genomic RNA	plasma AA012a	subtype: CRF01_AE	1	231	6A,15L,31G,33N,36AV,54M,58I,92P,110N,128D,146Q,148V,154K,161FS,178T,200S,207T,208G,225S
JX446835	AA012a_LH19	Thailand	2007		genomic RNA	plasma AA012a	subtype: CRF01_AE	1	231	6A,15L,31G,33N,54M,58I,92P,110N,128D,146Q,148V,154K,178T,200S,207T,208G,225S
JX446836	AA012a_LH20	Thailand	2007		genomic RNA	plasma AA012a	subtype: CRF01_AE	1	231	6A,15L,31G,33N,54M,58I,92P,110N,128D,146Q,148V,154K,178T,200S,207T,208G,225S
JX446830	AA012a_LH4	Thailand	2007		genomic RNA	plasma AA012a	subtype: CRF01_AE	1	231	6A,15L,31G,33N,54M,58I,92P,110N,128D,146Q,148V,154K,178T,200S,207T,208G,225S
JX446831	AA012a_LH5	Thailand	2007		genomic RNA	plasma AA012a	subtype: CRF01_AE	1	231	6A,15L,31G,33N,54M,58I,92P,110N,128D,146Q,148V,154K,178T,200S,207T,208G,225S
JX446833	AA012a_LH7	Thailand	2007		genomic RNA	plasma AA012a	subtype: CRF01_AE	1	231	6A,15L,31G,33N,54M,58I,92P,110N,128D,146Q,148V,154K,178T,200S,207T,208G,225S
JX446832	AA012a_LH8	Thailand	2007		genomic RNA	plasma AA012a	subtype: CRF01_AE	1	231	6A,15L,31G,33N,54M,58I,92P,110N,128D,146Q,148V,154K,178T,200S,207T,208G,225S
JX446852	AA013a01	Thailand	2008		genomic RNA	plasma AA013a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,92P,110N,120S,128D,200H,207T,208G,225S
JX446851	AA013a02	Thailand	2008		genomic RNA	plasma AA013a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,92P,110N,120S,128D,200H,207T,208G,225S
JX446849	AA013a03	Thailand	2008		genomic RNA	plasma AA013a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,92P,110N,120S,128D,200H,207T,208G,225S
JX446850	AA013a04	Thailand	2008		genomic RNA	plasma AA013a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,92P,110N,120S,128D,200H,207T,208G,225S
JX446848	AA013a05	Thailand	2008		genomic RNA	plasma AA013a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,92P,110N,120S,128DV,200H,207T,208G,225S
JX446855	AA014a01	Thailand	2006		genomic RNA	plasma AA014a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX446858	AA014a01L	Thailand	2006		genomic RNA	plasma AA014a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,63LQ,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX446854	AA014a02	Thailand	2006		genomic RNA	plasma AA014a	subtype: CRF01_AE	1	230	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX446859	AA014a02L	Thailand	2006		genomic RNA	plasma AA014a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX446856	AA014a03	Thailand	2006		genomic RNA	plasma AA014a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX446860	AA014a03L	Thailand	2006		genomic RNA	plasma AA014a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX446861	AA014a04L	Thailand	2006		genomic RNA	plasma AA014a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX446853	AA014a05	Thailand	2006		genomic RNA	plasma AA014a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX446862	AA014a05L	Thailand	2006		genomic RNA	plasma AA014a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX446857	AA014a06L	Thailand	2006		genomic RNA	plasma AA014a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX446869	AA015a_LH1	Thailand	2007		genomic RNA	plasma AA015a	subtype: CRF01_AE	1	231	6A,11I,14S,15L,31G,33N,37V,47S,54M,58I,68I,87Q,91F,92P,120S,128D,139H,178T,200S,207S,208G,225S
JX446870	AA015a_LH3	Thailand	2007		genomic RNA	plasma AA015a	subtype: CRF01_AE	1	231	6A,11I,14S,15L,31G,33N,37V,47S,54M,58I,68I,87Q,91F,92P,120NS,128D,139H,178T,200S,207S,208G,225S
JX446871	AA015a_LH4	Thailand	2007		genomic RNA	plasma AA015a	subtype: CRF01_AE	1	231	6A,11I,14S,15L,31G,33N,37V,47S,54M,58I,68I,87Q,91F,92P,120S,128D,139H,178T,200S,207S,208G,225S
JX446872	AA015a_LH7	Thailand	2007		genomic RNA	plasma AA015a	subtype: CRF01_AE	1	231	6A,11I,14S,15L,31G,33N,37V,47S,54M,58I,68I,87Q,91F,92P,120S,128D,139H,178T,200S,207S,208G,225S
JX446877	AA015a_WG4	Thailand	2007		genomic RNA	plasma AA015a	subtype: CRF01_AE	1	231	6A,11I,14S,15L,31G,33N,37V,47S,54M,58I,68I,87Q,91F,92P,120S,128D,139H,178T,200S,207S,208G,225S
JX446886	AA016a02L	Thailand	2008		genomic RNA	plasma AA016a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,200S,207A,208G,225S
JX446885	AA016a03L	Thailand	2008		genomic RNA	plasma AA016a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,200S,207A,208G,225S
JX446884	AA016a04L	Thailand	2008		genomic RNA	plasma AA016a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,200S,207A,208G,225S
JX446883	AA016a05L	Thailand	2008		genomic RNA	plasma AA016a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,200S,207A,208G,225S
JX446882	AA016a06L	Thailand	2008		genomic RNA	plasma AA016a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,200S,207A,208G,225S
JX446880	AA016a09L	Thailand	2008		genomic RNA	plasma AA016a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,200S,207A,208G,225S
JX446879	AA016a10L	Thailand	2008		genomic RNA	plasma AA016a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,200S,207A,208G,225S
JX446878	AA016a11L	Thailand	2008		genomic RNA	plasma AA016a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,200S,207A,208G,225S
JX446881	AA016a12L	Thailand	2008		genomic RNA	plasma AA016a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,200S,207T,208G,225S
JX446887	AA016a14L	Thailand	2008		genomic RNA	plasma AA016a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,48A,54M,58I,92P,110N,120S,128D,148V,200S,207A,208G,225S
JX446899	AA017a_wg1	Thailand	2006		genomic RNA	plasma AA017a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,87Q,110N,116A,128D,148V,149G,200S,207T,208G,210S,225S
JX446901	AA017a_wg3	Thailand	2006		genomic RNA	plasma AA017a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,56X,58I,83I,87Q,110N,116A,128D,148V,149G,200S,207T,208G,210S,225S
JX446902	AA017a_wg4	Thailand	2006		genomic RNA	plasma AA017a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,87Q,110N,116A,128D,148V,149G,200S,207T,208G,210S,225S
JX446903	AA017a_wg5	Thailand	2006		genomic RNA	plasma AA017a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,87Q,110N,116A,128D,148V,149G,200S,207T,208G,210S,225S
JX446904	AA017a_wg8	Thailand	2006		genomic RNA	plasma AA017a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,87Q,110N,116A,128D,148V,149G,200S,207T,208G,210S,225S
JX446898	AA017a_WG9	Thailand	2006		genomic RNA	plasma AA017a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,87Q,110N,116A,128D,148V,149G,200S,207T,208G,210S,225S
JX446905	AA018a01L	Thailand	2006		genomic RNA	plasma AA018a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,115M,120S,128D,148V,178T,200S,207T,208G,225S
JX446906	AA018a02L	Thailand	2006		genomic RNA	plasma AA018a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,112P,120S,128D,148V,178T,200S,207T,208G,225S
JX446907	AA018a03L	Thailand	2006		genomic RNA	plasma AA018a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120S,128D,148V,178T,200S,207T,208G,225S
JX446908	AA018a04L	Thailand	2006		genomic RNA	plasma AA018a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120S,128D,148V,178T,200S,207T,208G,225S
JX446909	AA018a05L	Thailand	2006		genomic RNA	plasma AA018a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,116A,120S,128D,148V,178T,200S,207T,208G,225S
JX446916	AA019a_WG1	Thailand	2007		genomic RNA	plasma AA019a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,204S,207T,208G,225S
JX446917	AA019a_WG10	Thailand	2007		genomic RNA	plasma AA019a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,32X,33X,54M,58I,92P,120S,128D,148V,178T,204S,207T,208G,225S
JX446918	AA019a_WG11	Thailand	2007		genomic RNA	plasma AA019a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,204S,207T,208G,225S
JX446919	AA019a_WG12	Thailand	2007		genomic RNA	plasma AA019a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,185MV,204S,207T,208G,225S
JX446920	AA019a_WG2	Thailand	2007		genomic RNA	plasma AA019a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,204S,207T,208G,225S
JX446921	AA019a_WG3	Thailand	2007		genomic RNA	plasma AA019a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,204S,207T,208G,225S
JX446922	AA019a_WG4	Thailand	2007		genomic RNA	plasma AA019a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,204S,207T,208G,225S
JX446923	AA019a_WG5	Thailand	2007		genomic RNA	plasma AA019a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,204S,207T,208G,225S
JX446924	AA019a_WG7	Thailand	2007		genomic RNA	plasma AA019a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,204S,207T,208G,225S
JX446925	AA019a_WG8	Thailand	2007		genomic RNA	plasma AA019a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,204S,207T,208G,225S
JX446926	AA019a_WG9	Thailand	2007		genomic RNA	plasma AA019a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,204S,207T,208G,225S
JX446927	AA020a_wg2	Thailand	2006		genomic RNA	plasma AA020a	subtype: E/B	1	231	6A,14S,15L,27I,31G,33N,54M,58I,92P,110N,128D,148V,178T,200S,207T,208G,225S
JX446929	AA020a_wg3	Thailand	2006		genomic RNA	plasma AA020a	subtype: E/B	1	231	6A,14S,15L,27I,31G,33N,54M,58I,92P,110N,128D,148V,178T,200S,207T,208G,225S
JX446930	AA020a_wg4	Thailand	2006		genomic RNA	plasma AA020a	subtype: E/B	1	231	6A,14S,15L,27I,31G,33N,54M,58I,92P,110N,128D,148V,178T,200S,207T,208G,225S
JX446928	AA020a_wg5	Thailand	2006		genomic RNA	plasma AA020a	subtype: E/B	1	231	6A,14S,15L,27I,31G,33N,54M,58I,92P,110N,128D,148V,178T,200S,207T,208G,225S
JX446931	AA020a_wg6	Thailand	2006		genomic RNA	plasma AA020a	subtype: E/B	1	231	6A,14S,15L,27I,31G,33N,54M,58I,92P,110N,128D,148V,178T,200S,207T,208G,225S
JX446933	AA021a01L	Thailand	2007		genomic RNA	plasma AA021a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,128D,154K,178T,200S,207T,208G,225S
JX446934	AA021a02L	Thailand	2007		genomic RNA	plasma AA021a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,128D,154K,178T,200S,207T,208G,225S
JX446935	AA021a03L	Thailand	2007		genomic RNA	plasma AA021a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,128D,154K,178T,200S,207T,208G,225S
JX446936	AA021a04L	Thailand	2007		genomic RNA	plasma AA021a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,128D,154K,178T,200S,207T,208G,225S
JX446937	AA021a05L	Thailand	2007		genomic RNA	plasma AA021a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,128D,154K,178T,200S,207T,208G,225S
JX446938	AA021a06L	Thailand	2007		genomic RNA	plasma AA021a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,128D,154K,178T,200S,207T,208G,225S
JX446939	AA021a08L	Thailand	2007		genomic RNA	plasma AA021a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,128D,154K,178T,200S,207T,208G,225S
JX446940	AA021a09L	Thailand	2007		genomic RNA	plasma AA021a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,116GR,128D,154K,178T,200S,207T,208G,225S
JX446941	AA021a10L	Thailand	2007		genomic RNA	plasma AA021a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,128D,154K,178T,200S,207T,208G,225S
JX446932	AA021a11L	Thailand	2007		genomic RNA	plasma AA021a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,128D,154K,178T,200S,207T,208G,225S
JX446954	AA022a_LH10	Thailand	2006		genomic RNA	plasma AA022a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83I,120S,148V,178T,200S,207T,208G,225S
JX446955	AA022a_LH13	Thailand	2006		genomic RNA	plasma AA022a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83I,120S,148V,178T,183NS,200S,207T,208G,225S
JX446956	AA022a_LH14	Thailand	2006		genomic RNA	plasma AA022a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83I,120S,148V,178T,200S,207T,208G,225S
JX446957	AA022a_LH6	Thailand	2006		genomic RNA	plasma AA022a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83I,120S,148V,178T,200S,207T,208G,225S
JX446958	AA022a_LH7	Thailand	2006		genomic RNA	plasma AA022a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83I,120S,148V,178T,200S,207T,208G,225S
JX446959	AA022a_LH9	Thailand	2006		genomic RNA	plasma AA022a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83I,120S,148V,178T,200S,207T,208G,225S
JX446969	AA023a01L	Thailand	2005		genomic RNA	plasma AA023a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83L,87Q,92P,96L,110N,120G,123A,128D,178T,200S,207T,208G,225S
JX446965	AA023a02L	Thailand	2005		genomic RNA	plasma AA023a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83L,87Q,92P,96L,110N,120G,123A,128D,178T,200S,207T,208G,225S
JX446975	AA023a03L	Thailand	2005		genomic RNA	plasma AA023a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83L,87Q,92P,96L,110N,120G,123A,128D,178T,200S,207T,208G,225S
JX446966	AA023a04L	Thailand	2005		genomic RNA	plasma AA023a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83L,87Q,92P,96L,110N,120G,123A,128D,178T,200S,207T,208G,225S
JX446967	AA023a05L	Thailand	2005		genomic RNA	plasma AA023a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83L,87Q,92P,96L,110N,120G,123A,128D,178T,200S,207T,208G,225S
JX446968	AA023a06L	Thailand	2005		genomic RNA	plasma AA023a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83L,87Q,92P,96L,110N,120G,123A,128D,178T,200S,207T,208G,225S
JX446973	AA023a07L	Thailand	2005		genomic RNA	plasma AA023a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83L,87Q,92P,96L,110N,120G,123A,128D,178T,200S,207T,208G,225S
JX446972	AA023a08L	Thailand	2005		genomic RNA	plasma AA023a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83L,87Q,92P,96L,110N,120G,123A,128D,178T,200S,207T,208G,225S
JX446971	AA023a09L	Thailand	2005		genomic RNA	plasma AA023a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83L,87Q,92P,96L,110N,120G,123A,128D,178T,200S,207T,208G,225S
JX446970	AA023a10L	Thailand	2005		genomic RNA	plasma AA023a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83L,87Q,92P,96L,110N,120G,123A,128D,178T,200S,207T,208G,225S
JX446974	AA023a11L	Thailand	2005		genomic RNA	plasma AA023a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83L,87Q,92P,96L,110N,120G,123A,128D,178T,200S,207T,208G,225S
JX446996	AA024a02	Thailand	2007		genomic RNA	plasma AA024a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,128D,148V,154K,178T,200S,207T,208G,225S
JX446995	AA024a03	Thailand	2007		genomic RNA	plasma AA024a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,128D,148V,154K,178T,200S,207T,208G,225S
JX446994	AA024a04	Thailand	2007		genomic RNA	plasma AA024a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,128D,148V,154K,178T,200S,207T,208G,225S
JX446992	AA024a05	Thailand	2007		genomic RNA	plasma AA024a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,128D,148V,154K,178T,200S,207T,208G,225S
JX446991	AA024a06	Thailand	2007		genomic RNA	plasma AA024a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,128D,148V,154K,178T,200S,207T,208G,225S
JX446990	AA024a07	Thailand	2007		genomic RNA	plasma AA024a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,128D,148V,154K,178T,200S,207T,208G,225S
JX446989	AA024a08	Thailand	2007		genomic RNA	plasma AA024a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,120S,128D,148V,154K,178T,200S,207T,208G,225S
JX446993	AA024a09	Thailand	2007		genomic RNA	plasma AA024a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,128D,148V,154K,178T,191I,200S,207T,208G,225S
JX446987	AA024a10	Thailand	2007		genomic RNA	plasma AA024a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,128D,148V,154K,178T,191I,200S,207T,208G,225S
JX446988	AA024a11	Thailand	2007		genomic RNA	plasma AA024a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,128D,148V,154K,178T,200S,207T,208G,225S
JX446997	AA025a_WG1	Thailand	2006		genomic RNA	plasma AA025a	subtype: E/B	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,180EG,200S,207T,208G
JX446998	AA025a_WG10	Thailand	2006		genomic RNA	plasma AA025a	subtype: E/B	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G
JX446999	AA025a_WG12	Thailand	2006		genomic RNA	plasma AA025a	subtype: E/B	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G
JX447000	AA025a_WG13	Thailand	2006		genomic RNA	plasma AA025a	subtype: E/B	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G
JX447001	AA025a_WG14	Thailand	2006		genomic RNA	plasma AA025a	subtype: E/B	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G
JX447002	AA025a_WG3	Thailand	2006		genomic RNA	plasma AA025a	subtype: E/B	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120S,128D,148V,155QR,178T,200S,207T,208G
JX447003	AA025a_WG4	Thailand	2006		genomic RNA	plasma AA025a	subtype: E/B	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,173K,178T,200S,207T,208G
JX447004	AA025a_WG5	Thailand	2006		genomic RNA	plasma AA025a	subtype: E/B	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G
JX447005	AA025a_WG8	Thailand	2006		genomic RNA	plasma AA025a	subtype: E/B	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G
JX447006	AA025a_WG9	Thailand	2006		genomic RNA	plasma AA025a	subtype: E/B	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120S,128D,148V,178T,200S,207T,208G
JX447012	AA026a01L	Thailand	2007		genomic RNA	plasma AA026a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83I,86I,87Q,91N,92P,120S,148V,149G,154K,178T,200S,207T,208G,225S
JX447011	AA026a02L	Thailand	2007		genomic RNA	plasma AA026a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83I,86I,87Q,91N,92P,120S,148V,149G,154K,178T,200S,207T,208G,225S
JX447010	AA026a03L	Thailand	2007		genomic RNA	plasma AA026a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83I,86I,87Q,91N,92P,120S,148V,149G,154K,178T,200S,207T,208G,225S
JX447009	AA026a04L	Thailand	2007		genomic RNA	plasma AA026a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83I,86I,87Q,91N,92P,120S,148V,149G,154K,178T,200S,207T,208G,225S
JX447007	AA026a05L	Thailand	2007		genomic RNA	plasma AA026a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83I,86I,87Q,91N,92P,120S,148V,149G,154K,178T,200S,207T,208G,225S
JX447008	AA026a06L	Thailand	2007		genomic RNA	plasma AA026a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83I,86I,87Q,91N,92P,120S,148V,149G,154K,178T,200S,207T,208G,225S
JX447018	AA027a_wg1	Thailand	2004		genomic RNA	plasma AA027a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,79D,92P,110N,120G,128D,148V,178T,200S,207T,208G,225S
JX447025	AA027a_wg1a	Thailand	2004		genomic RNA	plasma AA027a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,79D,92P,110N,120G,128D,148V,178T,200S,207T,208G,225S
JX447019	AA027a_wg2	Thailand	2004		genomic RNA	plasma AA027a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,79D,92P,110N,120G,128D,148V,178T,200S,207T,208G,225S
JX447026	AA027a_wg2a	Thailand	2004		genomic RNA	plasma AA027a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,79D,92P,110N,120G,128D,148V,178T,200S,207T,208G,225S
JX447020	AA027a_wg3	Thailand	2004		genomic RNA	plasma AA027a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,79D,92P,110N,120G,128D,148V,178T,200S,207T,208G,225S
JX447027	AA027a_wg3a	Thailand	2004		genomic RNA	plasma AA027a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,79D,92P,110N,120G,128D,148V,178T,200S,207T,208G,225S
JX447021	AA027a_wg4	Thailand	2004		genomic RNA	plasma AA027a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,79D,92P,110N,120G,128D,148V,178T,200S,207T,208G,225S
JX447022	AA027a_wg5	Thailand	2004		genomic RNA	plasma AA027a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,79D,92P,110N,120G,128D,148V,178T,200S,207T,208G,225S
JX447023	AA027a_wg6	Thailand	2004		genomic RNA	plasma AA027a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,79D,92P,110N,120G,128D,148V,178T,200S,207T,208G,225S
JX447024	AA027a_wg7	Thailand	2004		genomic RNA	plasma AA027a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,79D,92P,110N,120G,128D,148V,178T,200S,207T,208G,225S
JX447028	AA028a_wg3	Thailand	2007		genomic RNA	plasma AA028a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,86A,92P,120S,128D,148V,200S,207T,208G,225S
JX447029	AA028a_wg4	Thailand	2007		genomic RNA	plasma AA028a	subtype: CRF01_AE	1	231	6A,14P,15L,31DG,33N,54M,58I,83L,86A,92P,120S,128D,148V,200S,207T,208G,225S
JX447030	AA028a_wg5	Thailand	2007		genomic RNA	plasma AA028a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,86A,92P,120S,121T,128D,148V,200S,207T,208G,225S
JX447031	AA028a_wg7	Thailand	2007		genomic RNA	plasma AA028a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,86A,92P,120S,128D,148V,200S,207T,208G,225S
JX447032	AA028a_wg9	Thailand	2007		genomic RNA	plasma AA028a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,86A,92P,120S,128D,148V,200S,207T,208G,225S
JX447036	AA029b01L	Thailand	2005		genomic RNA	plasma AA029b	subtype: CRF01_AE	1	231	6A,14P,15V,27I,31G,33N,54M,58I,87Q,92P,96I,116A,128D,148V,178T,200S,207T,208G,225S
JX447037	AA029b02L	Thailand	2005		genomic RNA	plasma AA029b	subtype: CRF01_AE	1	231	6A,14P,15V,27I,31G,33N,54M,58I,87Q,92P,96I,116A,128D,148V,178T,200S,207T,208G,225S
JX447038	AA029b03L	Thailand	2005		genomic RNA	plasma AA029b	subtype: CRF01_AE	1	231	6A,14P,15V,27I,31G,33N,54M,58I,87Q,92P,96I,116A,128D,148V,178T,200S,207T,208G,225S
JX447039	AA029b04L	Thailand	2005		genomic RNA	plasma AA029b	subtype: CRF01_AE	1	231	6A,14P,15V,27I,31G,33N,54M,58I,87Q,92P,96I,116A,128D,148V,178T,200S,206E,207T,208G,225S
JX447040	AA029b05L	Thailand	2005		genomic RNA	plasma AA029b	subtype: CRF01_AE	1	231	6A,14P,15V,27I,31G,33N,54M,58I,87Q,92P,96I,116A,128D,148V,178T,200S,207T,208G,225S
JX447041	AA029b06L	Thailand	2005		genomic RNA	plasma AA029b	subtype: CRF01_AE	1	231	6A,14P,15V,27I,31G,33N,54M,58I,87Q,92P,96I,116A,128D,148V,178T,200S,207T,208G,225S
JX447042	AA029b07L	Thailand	2005		genomic RNA	plasma AA029b	subtype: CRF01_AE	1	231	6A,14P,15V,27I,31G,33N,54M,58I,87Q,92P,96I,116A,128D,148V,178T,200S,207T,208G,225S
JX447035	AA029b08L	Thailand	2005		genomic RNA	plasma AA029b	subtype: CRF01_AE	1	231	6A,14P,15V,27I,31G,33N,54M,58I,87Q,92P,96I,116A,128D,148V,178T,200S,207T,208G,225S
JX447034	AA029b09L	Thailand	2005		genomic RNA	plasma AA029b	subtype: CRF01_AE	1	231	6A,14P,15V,27I,31G,33N,54M,58I,87Q,92P,96I,116A,128D,148V,178T,200S,207T,208G,225S
JX447033	AA029b10L	Thailand	2005		genomic RNA	plasma AA029b	subtype: CRF01_AE	1	231	6A,14P,15V,27I,31G,33N,54M,58I,87Q,92P,96I,116A,128D,148V,178T,200S,207T,208G,225S
JX447059	AA030a01	Thailand	2007		genomic RNA	plasma AA030a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447060	AA030a02	Thailand	2007		genomic RNA	plasma AA030a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447058	AA030a03	Thailand	2007		genomic RNA	plasma AA030a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207AT,208G,225S
JX447057	AA030a04	Thailand	2007		genomic RNA	plasma AA030a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,179QR,200S,207T,208G,225S
JX447055	AA030a05	Thailand	2007		genomic RNA	plasma AA030a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447056	AA030a06	Thailand	2007		genomic RNA	plasma AA030a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447054	AA030a08	Thailand	2007		genomic RNA	plasma AA030a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447061	AA030a09	Thailand	2007		genomic RNA	plasma AA030a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447053	AA030a11	Thailand	2007		genomic RNA	plasma AA030a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447062	AA030a12	Thailand	2007		genomic RNA	plasma AA030a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447068	AA031a_LH1	Thailand	2007		genomic RNA	plasma AA031a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,86A,91V,92Q,114HQ,128D,148V,149GS,178T,200S,207T,208G,225S
JX447069	AA031a_LH2	Thailand	2007		genomic RNA	plasma AA031a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,86A,91V,92Q,128D,148V,178T,200S,207T,208G,225S
JX447070	AA031a_LH3	Thailand	2007		genomic RNA	plasma AA031a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,86A,91V,92Q,128D,148V,178T,200S,207T,208G,225S
JX447063	AA031a01	Thailand	2007		genomic RNA	plasma AA031a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,86A,91V,92Q,128D,148V,178T,200S,207T,208G,225S
JX447064	AA031a02	Thailand	2007		genomic RNA	plasma AA031a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,86A,91V,92Q,128D,148V,178T,200S,207T,208G,225S
JX447065	AA031a04	Thailand	2007		genomic RNA	plasma AA031a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,86A,91V,92Q,128D,148V,178T,200S,207T,208G,225S
JX447066	AA031a05	Thailand	2007		genomic RNA	plasma AA031a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,86A,91V,92Q,128D,148V,178T,200S,207T,208G,225S
JX447067	AA031a06	Thailand	2007		genomic RNA	plasma AA031a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,86A,91V,92Q,128D,148V,178T,200S,207T,208G,225S
JX447072	AA032a01	Thailand	2008		genomic RNA	plasma AA032a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,79D,92P,110N,120S,128D,148V,178T,199R,200S,207T,208G,225S
JX447073	AA032a02	Thailand	2008		genomic RNA	plasma AA032a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,79D,92P,110N,120S,128D,148V,178T,199R,200S,207T,208G,225S
JX447076	AA032a03	Thailand	2008		genomic RNA	plasma AA032a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,79D,92P,110N,120S,128D,148V,178T,199R,200S,207T,208G,225S
JX447074	AA032a04	Thailand	2008		genomic RNA	plasma AA032a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,79D,92P,110N,120S,128D,148V,178T,199R,200S,207T,208G,225S
JX447075	AA032a05	Thailand	2008		genomic RNA	plasma AA032a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,79D,92P,110N,120S,128D,148V,178T,199R,200S,207T,208G,225S
JX447077	AA033a_wg1	Thailand	2005		genomic RNA	plasma AA033a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447082	AA033a_wg2	Thailand	2005		genomic RNA	plasma AA033a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447078	AA033a_wg3a	Thailand	2005		genomic RNA	plasma AA033a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447083	AA033a_wg4	Thailand	2005		genomic RNA	plasma AA033a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447079	AA033a_wg4a	Thailand	2005		genomic RNA	plasma AA033a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,135IL,148V,173G,178T,200S,207T,208G,225S
JX447084	AA033a_wg5	Thailand	2005		genomic RNA	plasma AA033a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447080	AA033a_wg5a	Thailand	2005		genomic RNA	plasma AA033a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447085	AA033a_wg6	Thailand	2005		genomic RNA	plasma AA033a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,195DN,200S,207T,208G,225S
JX447081	AA033a_wg6a	Thailand	2005		genomic RNA	plasma AA033a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447086	AA033a_wg7	Thailand	2005		genomic RNA	plasma AA033a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447087	AA034a_wg1	Thailand	2006		genomic RNA	plasma AA034a	subtype: CRF01_AE	1	231	6A,13N,14P,15M,31G,50S,54M,58I,83L,92P,110N,120S,128D,148V,180D,200S,207T,208G,225S
JX447088	AA034a_wg11	Thailand	2006		genomic RNA	plasma AA034a	subtype: CRF01_AE	1	231	6A,13N,14P,15M,31G,50S,54M,58I,83L,92P,110N,120S,128D,148V,180D,200S,207T,208G,225S
JX447089	AA034a_wg2	Thailand	2006		genomic RNA	plasma AA034a	subtype: CRF01_AE	1	231	6A,13N,14P,15M,31G,50S,54M,58I,83L,92P,110N,120S,128D,148V,180D,200S,207T,208G,225S
JX447090	AA034a_wg4	Thailand	2006		genomic RNA	plasma AA034a	subtype: CRF01_AE	1	231	6A,13N,14P,15M,31G,50S,54M,58I,83L,92P,110N,120S,128D,148V,180D,200S,207T,208G,225S
JX447091	AA034a_wg5	Thailand	2006		genomic RNA	plasma AA034a	subtype: CRF01_AE	1	231	6A,13N,14P,15M,31G,50S,54M,58I,83L,92P,110N,120S,128D,148V,180D,200S,207T,208G,225S
JX447092	AA034a_wg6	Thailand	2006		genomic RNA	plasma AA034a	subtype: CRF01_AE	1	231	6A,13N,14P,15M,31G,50S,54M,58I,83L,92P,110N,120S,128D,148V,180D,200S,207T,208G,225S
JX447093	AA034a_wg7	Thailand	2006		genomic RNA	plasma AA034a	subtype: CRF01_AE	1	231	6A,13N,14P,15M,31G,50S,54M,58I,83L,92P,110N,120S,128D,148V,180D,200S,207T,208G,225S
JX447094	AA035a01L	Thailand	2006		genomic RNA	plasma AA035a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
JX447095	AA035a02L	Thailand	2006		genomic RNA	plasma AA035a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
JX447096	AA035a03L	Thailand	2006		genomic RNA	plasma AA035a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,149G,178T,200S,207T,208G,225S
JX447097	AA035a04L	Thailand	2006		genomic RNA	plasma AA035a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
JX447098	AA035a05L	Thailand	2006		genomic RNA	plasma AA035a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
JX447101	AA035a06L	Thailand	2006		genomic RNA	plasma AA035a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
JX447100	AA035a07L	Thailand	2006		genomic RNA	plasma AA035a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
JX447099	AA035a10L	Thailand	2006		genomic RNA	plasma AA035a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,149GS,178T,200S,207T,208G,225S
JX447113	AA036a01L	Thailand	2007		genomic RNA	plasma AA036a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,120G,128D,148V,200S,207T,208G,225S
JX447112	AA036a02L	Thailand	2007		genomic RNA	plasma AA036a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,120G,128D,148V,200S,207T,208G,225S
JX447115	AA036a03L	Thailand	2007		genomic RNA	plasma AA036a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,120G,128D,148V,200S,207T,208G,225S
JX447116	AA036a04L	Thailand	2007		genomic RNA	plasma AA036a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,120G,128D,148V,200S,207T,208G,225S
JX447114	AA036a05L	Thailand	2007		genomic RNA	plasma AA036a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,120G,128D,148V,200S,207T,208G,225S
JX447130	AA037a_wg1	Thailand	2008		genomic RNA	plasma AA037a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,120S,128D,148V,178T,200S,207T,208G,225S
JX447122	AA037A_WG11	Thailand	2008		genomic RNA	plasma AA037a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447123	AA037A_WG12	Thailand	2008		genomic RNA	plasma AA037a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447131	AA037a_wg2	Thailand	2008		genomic RNA	plasma AA037a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,74D,92P,110N,120G,123A,128D,148V,175D,178T,200S,207T,208G,225S
JX447124	AA037A_WG3	Thailand	2008		genomic RNA	plasma AA037a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447125	AA037a_WG4	Thailand	2008		genomic RNA	plasma AA037a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447126	AA037a_WG5	Thailand	2008		genomic RNA	plasma AA037a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,97GR,110N,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447127	AA037a_WG6	Thailand	2008		genomic RNA	plasma AA037a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447128	AA037a_WG7	Thailand	2008		genomic RNA	plasma AA037a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447129	AA037a_WG9	Thailand	2008		genomic RNA	plasma AA037a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447132	AA038a_WG3	Thailand	2006		genomic RNA	plasma AA038a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,128D,148V,178T,200S,207T,208G,225S
JX447133	AA038a_WG5	Thailand	2006		genomic RNA	plasma AA038a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,128D,148V,178T,200S,207T,208G,225S
JX447134	AA038a_WG6	Thailand	2006		genomic RNA	plasma AA038a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,98G,128D,148V,178T,200S,207T,208G,225S
JX447135	AA038a_WG7	Thailand	2006		genomic RNA	plasma AA038a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,116R,128D,148V,178T,200S,207T,208G,225S
JX447136	AA038a_WG8	Thailand	2006		genomic RNA	plasma AA038a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,128D,148V,178T,200S,207T,208G,225S
JX447137	AA038a_WG9	Thailand	2006		genomic RNA	plasma AA038a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,128D,148V,178IT,200S,207T,208G,225S
JX447142	AA039a01L	Thailand	2007		genomic RNA	plasma AA039a	subtype: CRF02_AG	1	231	6A,14S,27I,54M,58I,71D,92P,120S,135V,148V,169F,178T,200S,203R,208G,229K
JX447138	AA039a02L	Thailand	2007		genomic RNA	plasma AA039a	subtype: CRF02_AG	1	231	6A,14S,27I,54M,58I,71D,92P,120S,135V,148V,169F,178T,200S,208G
JX447141	AA039a03L	Thailand	2007		genomic RNA	plasma AA039a	subtype: CRF02_AG	1	231	6A,14S,15M,27I,54M,58I,71D,92P,120S,135V,148V,169F,178T,200S,208G
JX447145	AA039a04L	Thailand	2007		genomic RNA	plasma AA039a	subtype: CRF02_AG	1	231	6A,14S,27I,54M,58I,71D,92P,120S,135V,148V,169F,178T,200S,203R,208G,229K
JX447140	AA039a07L	Thailand	2007		genomic RNA	plasma AA039a	subtype: CRF02_AG	1	231	6A,14S,15M,27I,54M,58I,71D,92P,120S,135V,148V,169F,178T,200S,208G
JX447139	AA039a08L	Thailand	2007		genomic RNA	plasma AA039a	subtype: CRF02_AG	1	231	6A,14S,27I,54M,58I,71D,92P,120S,135V,148V,169F,178T,200S,203R,208G,229K
JX447144	AA039a10L	Thailand	2007		genomic RNA	plasma AA039a	subtype: CRF02_AG	1	231	6A,14S,27I,54M,58I,71D,92P,120S,135V,148V,169F,178T,200S,208G
JX447143	AA039a11L	Thailand	2007		genomic RNA	plasma AA039a	subtype: CRF02_AG	1	231	6A,14S,27I,54M,58I,71D,92P,120S,135V,148V,169F,178T,200S,208G
JX447164	AA040a_wg1	Thailand	2007		genomic RNA	plasma AA040a	subtype: B	1	231	6L,14P,83L,91V,154K,180D,225S
JX447156	AA040a_WG11	Thailand	2007		genomic RNA	plasma AA040a	subtype: B	1	231	6L,14P,83L,91V,154K,180D,225S
JX447157	AA040a_WG12	Thailand	2007		genomic RNA	plasma AA040a	subtype: B	1	231	6L,14P,83L,91V,154K,180D,225S
JX447158	AA040a_WG13	Thailand	2007		genomic RNA	plasma AA040a	subtype: B	1	231	6L,14P,83L,91V,154K,180D,225S
JX447159	AA040a_WG14	Thailand	2007		genomic RNA	plasma AA040a	subtype: B	1	231	6L,14P,83L,91V,98V,154K,180D,225S
JX447165	AA040a_wg2	Thailand	2007		genomic RNA	plasma AA040a	subtype: B	1	231	6L,14P,83L,91V,154K,180D,225S
JX447160	AA040a_WG4	Thailand	2007		genomic RNA	plasma AA040a	subtype: B	1	231	6L,14P,83L,91V,154K,180D,225S
JX447162	AA040a_WG6	Thailand	2007		genomic RNA	plasma AA040a	subtype: B	1	231	6L,14P,83L,91V,154K,180D,225S
JX447163	AA040a_WG7	Thailand	2007		genomic RNA	plasma AA040a	subtype: B	1	231	6L,14P,83L,91V,154K,180D,225S
JX447167	AA041a01L	Thailand	2007		genomic RNA	plasma AA041a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447168	AA041a02L	Thailand	2007		genomic RNA	plasma AA041a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447169	AA041a03L	Thailand	2007		genomic RNA	plasma AA041a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447170	AA041a04L	Thailand	2007		genomic RNA	plasma AA041a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447171	AA041a05L	Thailand	2007		genomic RNA	plasma AA041a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,152N,178T,200S,207T,208G,225S
JX447172	AA041a06L	Thailand	2007		genomic RNA	plasma AA041a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,185MT,200S,207T,208G,225S
JX447173	AA041a07L	Thailand	2007		genomic RNA	plasma AA041a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447174	AA041a08L	Thailand	2007		genomic RNA	plasma AA041a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447166	AA041a09L	Thailand	2007		genomic RNA	plasma AA041a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447175	AA041a10L	Thailand	2007		genomic RNA	plasma AA041a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447176	AA041a11L	Thailand	2007		genomic RNA	plasma AA041a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447197	AA042a01L	Thailand	2006		genomic RNA	plasma AA042a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,120G,123S,128D,148V,200S,206E,207I,208G,225S
JX447190	AA042a02L	Thailand	2006		genomic RNA	plasma AA042a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,110N,120G,123S,128D,148V,200S,207S,208G,225S
JX447192	AA042a04L	Thailand	2006		genomic RNA	plasma AA042a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,110N,120G,123S,128D,148V,200S,207S,208G,225S
JX447191	AA042a05L	Thailand	2006		genomic RNA	plasma AA042a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,110N,120G,123S,128D,148V,200S,207S,208G,225S
JX447193	AA042a07L	Thailand	2006		genomic RNA	plasma AA042a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,110N,120G,123S,128D,148V,200S,207S,208G,225S
JX447187	AA042a09L	Thailand	2006		genomic RNA	plasma AA042a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,110N,120G,123S,128D,148V,200S,207T,208G,225S
JX447196	AA042a10L	Thailand	2006		genomic RNA	plasma AA042a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,110N,120G,123S,128D,148V,200S,207T,208G,209V,225S
JX447195	AA042a11L	Thailand	2006		genomic RNA	plasma AA042a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,120G,123S,128D,148V,200S,207I,208G,225S
JX447198	AA042a12L	Thailand	2006		genomic RNA	plasma AA042a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,110N,120G,123S,128D,148V,200S,207S,208G,225S
JX447194	AA042a13L	Thailand	2006		genomic RNA	plasma AA042a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,110N,120G,123S,128D,148V,200S,207S,208G,225S
JX447188	AA042a14L	Thailand	2006		genomic RNA	plasma AA042a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,110N,120G,123S,128D,148V,200S,207I,208G,225S
JX447189	AA042a15L	Thailand	2006		genomic RNA	plasma AA042a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,110N,120G,123S,128D,148V,200S,207S,208G,223GR,225S
JX447210	AA044a_LH12	Thailand	2006		genomic RNA	plasma AA044a	subtype: CRF01_AE	1	231	6A,14P,15L,27I,31G,33N,54M,58I,71D,92P,120S,128D,148V,169F,178T,200S,203R,207T,208G,225S
JX447211	AA044a_LH13	Thailand	2006		genomic RNA	plasma AA044a	subtype: CRF01_AE	1	231	6A,14P,15L,27I,31G,33N,54M,58I,71D,92P,120S,128D,148V,169F,178T,200S,203R,207T,208G,225S
JX447212	AA044a_LH14	Thailand	2006		genomic RNA	plasma AA044a	subtype: CRF01_AE	1	231	6A,14P,15L,27I,31G,33N,54M,58I,71D,92P,120S,128D,148V,169F,178T,200S,203R,207T,208G,225S
JX447213	AA044a_LH15	Thailand	2006		genomic RNA	plasma AA044a	subtype: CRF01_AE	1	231	6A,11T,14P,15L,27I,31G,33N,54M,58I,71D,92P,120S,128D,148V,169F,178T,200S,203R,207T,208G,225S
JX447214	AA044a_LH16	Thailand	2006		genomic RNA	plasma AA044a	subtype: CRF01_AE	1	231	6A,11T,14P,15L,27I,31G,33N,54M,58I,71D,92P,120S,128D,148V,169F,178T,200S,203R,207T,208G,225S
JX447215	AA044a_LH17	Thailand	2006		genomic RNA	plasma AA044a	subtype: CRF01_AE	1	231	6A,14P,15L,27I,31G,33N,54M,58I,71D,92P,120S,128D,148V,169F,178T,200S,203R,207T,208G,225S
JX447216	AA044a_LH18	Thailand	2006		genomic RNA	plasma AA044a	subtype: CRF01_AE	1	231	6A,11T,14P,15L,27I,31G,33N,54M,58I,71D,92P,120S,128D,148V,169F,178T,200S,203R,207T,208G,225S
JX447217	AA044a_LH19	Thailand	2006		genomic RNA	plasma AA044a	subtype: CRF01_AE	1	231	6A,11T,14P,15L,24AV,27I,31G,33N,54M,58I,71D,92P,120S,123S,128D,148V,169F,178T,200S,203R,207T,208G,225S
JX447218	AA044a_LH20	Thailand	2006		genomic RNA	plasma AA044a	subtype: CRF01_AE	1	231	6A,11T,14P,15L,27I,31G,33N,54M,58I,71D,92P,120S,128D,148V,169F,178T,200S,203R,207T,208G,225S
JX447219	AA044a_LH4	Thailand	2006		genomic RNA	plasma AA044a	subtype: CRF01_AE	1	231	6A,11T,14P,15L,27I,31G,33N,37L,54M,58I,71D,91V,92P,120S,128D,148V,169F,178T,200S,203R,207T,208G,225S
JX447232	AA045a01L	Thailand	2009		genomic RNA	plasma AA045a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,149G,178T,200S,207T,208G,225S
JX447231	AA045a02L	Thailand	2009		genomic RNA	plasma AA045a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,149G,178T,200S,207T,208G,225S
JX447230	AA045a04L	Thailand	2009		genomic RNA	plasma AA045a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,149G,178T,200S,207T,208G,225S
JX447233	AA045a05L	Thailand	2009		genomic RNA	plasma AA045a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,149G,178T,200S,207T,208G,225S
JX447234	AA045a06L	Thailand	2009		genomic RNA	plasma AA045a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,149G,178T,200S,207T,208G,225S
JX447248	AA048a01L	Thailand	2007		genomic RNA	plasma AA048a	subtype: CRF01_AE	1	231	6A,11T,15V,31G,33N,54M,58I,71D,92P,128D,148V,149G,154K,200S,207T,208G,225S
JX447246	AA048b02L	Thailand	2007		genomic RNA	plasma AA048b	subtype: CRF01_AE	1	231	6A,11T,15V,31G,33N,54M,58I,71D,92P,128D,148V,149G,154K,200S,207T,208G,225S
JX447251	AA048b03L	Thailand	2007		genomic RNA	plasma AA048b	subtype: CRF01_AE	1	231	6A,11T,15V,31G,33N,54M,58I,71D,92P,128D,148V,149G,154K,200S,207T,208G,225S
JX447247	AA048b04L	Thailand	2007		genomic RNA	plasma AA048b	subtype: CRF01_AE	1	231	6A,10T,11T,15L,31G,33N,54M,58I,71D,92P,116GV,128D,148V,149G,154K,200S,207T,208G,225S
JX447250	AA048b05L	Thailand	2007		genomic RNA	plasma AA048b	subtype: CRF01_AE	1	231	6A,11T,15V,31G,33N,54M,58I,71D,92P,128D,148V,149G,154K,200S,207T,208G,225S
JX447249	AA048b06L	Thailand	2007		genomic RNA	plasma AA048b	subtype: CRF01_AE	1	231	6A,11T,15V,31G,33N,54M,58I,71D,92P,128D,148V,149G,154K,200S,207T,208G,225S
JX447245	AA048b07L	Thailand	2007		genomic RNA	plasma AA048b	subtype: CRF01_AE	1	231	6A,11T,15L,31G,33N,54M,58I,71D,92P,128D,148V,149G,154K,200S,207T,208G,225S
JX447243	AA048b08L	Thailand	2007		genomic RNA	plasma AA048b	subtype: CRF01_AE	1	231	6A,11T,15V,31G,33N,54M,58I,71D,92P,128D,148V,149G,154K,200S,207T,208G,225S
JX447242	AA048b09L	Thailand	2007		genomic RNA	plasma AA048b	subtype: CRF01_AE	1	231	6A,10T,11T,15L,31G,33N,54M,58I,71D,92P,128D,148V,149G,154K,200S,207T,208G,225S
JX447244	AA048b10L	Thailand	2007		genomic RNA	plasma AA048b	subtype: CRF01_AE	1	231	6A,10T,11T,15L,31G,33N,54M,58I,71D,92P,128D,148V,149G,154K,200S,207T,208G,225S
JX447241	AA048b12L	Thailand	2007		genomic RNA	plasma AA048b	subtype: CRF01_AE	1	231	6A,10T,11T,15L,31G,33N,54M,58I,71D,92P,128D,148V,149G,154K,200S,207T,208G,225S
JX447269	AA049a_LH11	Thailand	2005		genomic RNA	plasma AA049a	subtype: CRF01_AE	1	231	6A,10P,11I,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447270	AA049a_LH12	Thailand	2005		genomic RNA	plasma AA049a	subtype: CRF01_AE	1	231	6A,10P,11I,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447271	AA049a_LH13	Thailand	2005		genomic RNA	plasma AA049a	subtype: CRF01_AE	1	231	6A,10P,11I,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447272	AA049a_LH15	Thailand	2005		genomic RNA	plasma AA049a	subtype: CRF01_AE	1	231	6A,10P,11I,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447273	AA049a_LH18	Thailand	2005		genomic RNA	plasma AA049a	subtype: CRF01_AE	1	231	6A,10P,11I,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447274	AA049a_LH3	Thailand	2005		genomic RNA	plasma AA049a	subtype: CRF01_AE	1	231	6A,10P,11I,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447275	AA049a_LH8	Thailand	2005		genomic RNA	plasma AA049a	subtype: CRF01_AE	1	231	6A,10P,11I,15L,31G,33N,54M,58I,92P,128D,148V,178T,180EG,200S,207T,208G,225S
JX447266	AA049a_WG11	Thailand	2005		genomic RNA	plasma AA049a	subtype: CRF01_AE	1	231	6A,10P,11I,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447267	AA049a_WG12	Thailand	2005		genomic RNA	plasma AA049a	subtype: CRF01_AE	1	231	6A,10P,11I,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447268	AA049a_WG13	Thailand	2005		genomic RNA	plasma AA049a	subtype: CRF01_AE	1	231	6A,10P,11I,15L,31G,33N,54M,58I,92P,128D,148I,178T,200S,207T,208G,225S
JX447284	AA050a_WG1	Thailand	2007		genomic RNA	plasma AA050a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,41T,54M,58I,86A,87Q,91F,92P,96L,120H,128D,148V,178T,200S,207S,208G,225S,229K
JX447285	AA050a_WG2	Thailand	2007		genomic RNA	plasma AA050a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,41T,54M,58I,86A,87Q,91F,92P,96L,120H,128D,148V,178T,200S,207S,208G,225S,229K
JX447286	AA050a_WG3	Thailand	2007		genomic RNA	plasma AA050a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,41T,54M,58I,86A,87Q,91F,92P,96L,120H,128D,148V,178T,200S,207S,208G,225S,229K
JX447287	AA050a_WG4	Thailand	2007		genomic RNA	plasma AA050a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,41T,54M,58I,86A,87Q,91F,92P,96L,120H,128D,148V,178T,200S,207S,208G,225S,229K
JX447288	AA050a_WG6	Thailand	2007		genomic RNA	plasma AA050a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,41T,54M,58I,86A,87Q,91F,92P,96L,120H,128D,148V,178T,200S,207S,208G,225S,229K
JX447283	AA050a_WG7	Thailand	2007		genomic RNA	plasma AA050a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,41T,54M,58I,86A,87Q,91F,92P,96L,120H,128D,148V,178T,200S,207S,208G,225S,229K
JX447292	AA051b01L	Thailand	2005		genomic RNA	plasma AA051b	subtype: CRF01_AE	1	231	6A,14P,15L,31S,41T,54M,58I,83A,92P,116A,120S,128D,178T,200A,201M,208G,225S
JX447293	AA051b02L	Thailand	2005		genomic RNA	plasma AA051b	subtype: CRF01_AE	1	231	6A,14P,15L,31S,41T,54M,58I,92P,116A,120S,128D,178T,200A,208G,225S
JX447291	AA051b03L	Thailand	2005		genomic RNA	plasma AA051b	subtype: CRF01_AE	1	231	6A,14P,15L,31S,41T,54M,58I,83A,92S,116A,120S,128D,178T,200A,201M,208G,225S
JX447290	AA051b04L	Thailand	2005		genomic RNA	plasma AA051b	subtype: CRF01_AE	1	231	6A,14P,15L,31S,41T,54M,58I,83AV,92P,116A,120S,128D,178T,200A,201M,208G,225S
JX447289	AA051b05L	Thailand	2005		genomic RNA	plasma AA051b	subtype: CRF01_AE	1	231	6A,14P,15L,31S,41T,54M,58I,83A,92P,116A,120S,128D,178T,200A,201M,208G,225S
JX447300	AA052a01	Thailand	2008		genomic RNA	plasma AA052a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,86A,91V,96I,128D,148V,178T,200S,207T,208G,225S
JX447301	AA052a02	Thailand	2008		genomic RNA	plasma AA052a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,44LS,54M,58I,83L,86A,91V,96I,128D,148V,178T,200S,207T,208G,225S
JX447302	AA052a06	Thailand	2008		genomic RNA	plasma AA052a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,86A,91V,96I,128D,148V,178T,200S,207T,208G,225S
JX447303	AA052a08	Thailand	2008		genomic RNA	plasma AA052a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,86A,91V,96I,128D,148V,178T,191AV,200S,207T,208G,225S
JX447304	AA052a10	Thailand	2008		genomic RNA	plasma AA052a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,86A,91V,96I,128D,148V,178T,200S,207T,208G,225S
JX447309	AA054a02	Thailand	2008		genomic RNA	plasma AA054a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83L,87Q,92P,96L,128D,148V,178T,200S,207T,208G,225S
JX447306	AA054a03	Thailand	2008		genomic RNA	plasma AA054a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,60E,83L,87Q,92P,96L,128D,148V,178T,200S,207T,208G,225S
JX447307	AA054a04	Thailand	2008		genomic RNA	plasma AA054a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83L,87Q,92P,96L,128D,148V,178T,200S,207T,208G,225S
JX447305	AA054a05	Thailand	2008		genomic RNA	plasma AA054a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83L,87Q,92P,96L,128D,148V,178T,200S,207T,208G,225S
JX447308	AA054a06	Thailand	2008		genomic RNA	plasma AA054a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83L,87Q,92P,96L,128D,148V,178T,200S,207T,208G,225S
JX447310	AA055a_WG1	Thailand	2006		genomic RNA	plasma AA055a	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,155QR,178T,200S,207T,208G,225S
JX447311	AA055a_WG3	Thailand	2006		genomic RNA	plasma AA055a	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
JX447312	AA055a_WG4	Thailand	2006		genomic RNA	plasma AA055a	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
JX447313	AA055a_WG7	Thailand	2006		genomic RNA	plasma AA055a	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
JX447314	AA055a_WG8	Thailand	2006		genomic RNA	plasma AA055a	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
JX447315	AA056a_WG2	Thailand	2006		genomic RNA	plasma AA056a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447316	AA056a_WG5	Thailand	2006		genomic RNA	plasma AA056a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447317	AA056a_WG6	Thailand	2006		genomic RNA	plasma AA056a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447320	AA057a01L	Thailand	2008		genomic RNA	plasma AA057a	subtype: CRF01_AE	1	231	6T,15L,31G,33N,54M,58I,83I,96I,110N,112A,116A,128D,148V,178T,200S,207T,208G,225S
JX447321	AA057a02L	Thailand	2008		genomic RNA	plasma AA057a	subtype: CRF01_AE	1	231	6T,15L,31G,33N,54M,58I,83I,96I,110N,112A,116A,128D,148V,178T,200S,207T,208G,225S
JX447322	AA057a04L	Thailand	2008		genomic RNA	plasma AA057a	subtype: CRF01_AE	1	231	6T,15L,31G,33N,54M,58I,83I,96I,110N,112A,116A,128D,148V,178T,200S,207T,208G,225S
JX447323	AA057a05L	Thailand	2008		genomic RNA	plasma AA057a	subtype: CRF01_AE	1	231	6T,15L,31G,33N,54M,58I,83I,96I,110N,112A,116A,128D,148V,178T,200S,207T,208G,225S
JX447324	AA057a06L	Thailand	2008		genomic RNA	plasma AA057a	subtype: CRF01_AE	1	231	6T,15L,31G,33N,54M,58I,83I,96I,110N,112A,116A,128D,148V,154GR,178T,200S,207T,208G,225S
JX447325	AA057a07L	Thailand	2008		genomic RNA	plasma AA057a	subtype: CRF01_AE	1	231	6T,15L,31G,33N,54M,58I,83I,96I,110N,112A,116A,128D,148V,178T,200S,207T,208G,225S
JX447326	AA057a08L	Thailand	2008		genomic RNA	plasma AA057a	subtype: CRF01_AE	1	231	6T,15L,31G,33N,54M,58I,83I,96I,110N,112A,116A,128D,148V,178T,200S,207T,208G,225S
JX447327	AA057a09L	Thailand	2008		genomic RNA	plasma AA057a	subtype: CRF01_AE	1	231	6T,15L,31G,33N,54M,58I,83I,96I,110N,112A,116A,128D,148V,178T,200S,207T,208G,225S
JX447319	AA057a10L	Thailand	2008		genomic RNA	plasma AA057a	subtype: CRF01_AE	1	231	6T,15L,31G,33N,54M,58I,83I,96I,110N,112A,116A,128D,148V,178T,200S,207T,208G,225S
JX447318	AA057a11L	Thailand	2008		genomic RNA	plasma AA057a	subtype: CRF01_AE	1	231	6T,15L,31G,33N,54M,58I,83I,96I,110N,112A,116A,128D,148V,178T,200S,207T,208G,225S
JX447338	AA058a01L	Thailand	2006		genomic RNA	plasma AA058a	subtype: CRF01_AE	1	231	6A,10P,11M,14S,15L,26A,27I,31G,33N,45D,54M,58I,64G,87Q,92P,96L,128D,148V,178T,200A,207T,208G,225S
JX447339	AA058a02L	Thailand	2006		genomic RNA	plasma AA058a	subtype: CRF01_AE	1	231	6A,10P,11M,14S,15L,26A,27I,31G,33N,45D,54M,58I,64G,87Q,92P,96L,128D,148V,178T,200A,207T,208G,225S
JX447340	AA058a03L	Thailand	2006		genomic RNA	plasma AA058a	subtype: CRF01_AE	1	231	6A,10P,11M,14S,15L,26A,27I,31G,33N,45D,54M,58I,64G,87Q,92P,96L,128D,148V,178T,200A,207T,208G,225S
JX447341	AA058a04L	Thailand	2006		genomic RNA	plasma AA058a	subtype: CRF01_AE	1	231	6A,10P,11M,14S,15L,26A,27I,31G,33N,45D,54M,58I,64G,87Q,92P,96L,128D,148V,178T,200A,207T,208G,225S
JX447342	AA058a05L	Thailand	2006		genomic RNA	plasma AA058a	subtype: CRF01_AE	1	231	6A,10P,11M,14S,15L,26A,27I,31G,33N,45D,54M,58I,64G,87Q,92P,96L,128D,148V,178T,200A,207T,208G,225S
JX447343	AA058a06L	Thailand	2006		genomic RNA	plasma AA058a	subtype: CRF01_AE	1	231	6A,10P,11M,14S,15L,26A,27I,31G,33N,45D,54M,58I,64G,87Q,92P,96L,128D,148V,178T,200A,207T,208G,225S
JX447349	AA059a_WG1	Thailand	2006		genomic RNA	plasma AA059a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,128D,148V,178T,200S,207L,208G,225A
JX447350	AA059a_WG15	Thailand	2006		genomic RNA	plasma AA059a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,128D,148V,178T,200S,207L,208G,225A
JX447351	AA059a_WG16	Thailand	2006		genomic RNA	plasma AA059a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,128D,148V,178T,200S,207L,208G,225A
JX447352	AA059a_WG18	Thailand	2006		genomic RNA	plasma AA059a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,128D,148V,178T,200S,207L,208G,225A
JX447353	AA059a_WG19	Thailand	2006		genomic RNA	plasma AA059a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,128D,148V,178T,200S,207L,208G,225A
JX447354	AA059a_WG20	Thailand	2006		genomic RNA	plasma AA059a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,128D,148I,178T,200S,207L,208G,225A
JX447355	AA059a_WG3	Thailand	2006		genomic RNA	plasma AA059a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,63R,128D,148V,178T,200S,207L,208G,225A
JX447356	AA059a_WG5	Thailand	2006		genomic RNA	plasma AA059a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,128D,148V,178T,200S,207L,208G,225A
JX447357	AA059a_WG6	Thailand	2006		genomic RNA	plasma AA059a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,128D,148V,178T,200S,207L,208G,225A
JX447358	AA059a_WG9	Thailand	2006		genomic RNA	plasma AA059a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,128D,148V,178T,200S,207L,208G,225A
JX447359	AA060a_WG1	Thailand	2008		genomic RNA	plasma AA060a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,46EG,54M,58I,79D,83I,87Q,92P,110N,120S,148V,204S,207T,208G,225S
JX447360	AA060a_WG10	Thailand	2008		genomic RNA	plasma AA060a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,79D,83I,87Q,92P,110N,120S,148V,167GR,204S,207T,208G,225S
JX447361	AA060a_WG2	Thailand	2008		genomic RNA	plasma AA060a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,79D,83I,87Q,92P,110N,120S,148V,204S,207T,208G,225S
JX447362	AA060a_WG3	Thailand	2008		genomic RNA	plasma AA060a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,79D,83I,87Q,92P,110N,120S,148V,204S,207T,208G,225S
JX447363	AA060a_WG4	Thailand	2008		genomic RNA	plasma AA060a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,79D,83I,87Q,92P,110N,120S,148V,204S,207T,208G,225S
JX447364	AA060a_WG5	Thailand	2008		genomic RNA	plasma AA060a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,79D,83I,87Q,92P,110N,120S,148V,204S,207T,208G,225S
JX447365	AA060a_WG6	Thailand	2008		genomic RNA	plasma AA060a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,79D,83I,87Q,92P,110N,120S,148V,204S,207T,208G,225S
JX447366	AA060a_WG7	Thailand	2008		genomic RNA	plasma AA060a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,79D,83I,87Q,92P,110N,120S,148V,204S,207T,208G,225S
JX447367	AA060a_WG8	Thailand	2008		genomic RNA	plasma AA060a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,79D,83I,87Q,92P,110N,120S,148V,204S,207T,208G,225S
JX447368	AA060a_WG9	Thailand	2008		genomic RNA	plasma AA060a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,79D,83I,87Q,92P,110N,120S,148V,204S,207T,208G,225S
JX447375	AA061a03L	Thailand	2007		genomic RNA	plasma AA061a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,91A,92P,120G,123A,148V,178T,200S,207T,208G,225S
JX447377	AA061a04L	Thailand	2007		genomic RNA	plasma AA061a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,91A,92P,120G,123A,148V,178T,200S,207T,208G,225S
JX447378	AA061a05L	Thailand	2007		genomic RNA	plasma AA061a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,91A,92P,120G,123A,148V,178T,200S,207T,208G,225S
JX447376	AA061a06L	Thailand	2007		genomic RNA	plasma AA061a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,91A,92P,120G,123A,148V,178T,200S,207T,208G,225S
JX447373	AA061a07L	Thailand	2007		genomic RNA	plasma AA061a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,91A,92P,120G,123A,148A,178T,200S,207T,208G,225S
JX447372	AA061a08L	Thailand	2007		genomic RNA	plasma AA061a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,91A,92P,120G,123A,148A,178T,200S,207T,208G,225S
JX447374	AA061a09L	Thailand	2007		genomic RNA	plasma AA061a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,91A,92P,120G,123A,148V,178T,200S,207T,208G,225S
JX447371	AA061a10L	Thailand	2007		genomic RNA	plasma AA061a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,91A,92P,120G,123A,148V,178T,200S,207T,208G,225S
JX447370	AA061a11L	Thailand	2007		genomic RNA	plasma AA061a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,91A,92P,120G,123A,148V,178T,200S,207T,208G,225S
JX447369	AA061a12L	Thailand	2007		genomic RNA	plasma AA061a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,91A,92P,120G,123A,148A,178T,200S,207T,208G,225S
JX447394	AA062b01L	Thailand	2005		genomic RNA	plasma AA062b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,111P,128D,178T,200S,207R,208G,225S
JX447393	AA062b02L	Thailand	2005		genomic RNA	plasma AA062b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,111P,128D,178T,200S,207R,208G,225S
JX447392	AA062b03L	Thailand	2005		genomic RNA	plasma AA062b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,111P,128D,178T,200S,207R,208G,225S
JX447391	AA062b04L	Thailand	2005		genomic RNA	plasma AA062b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,111P,128D,178T,200S,207R,208G,225S
JX447390	AA062b05L	Thailand	2005		genomic RNA	plasma AA062b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,111P,128D,178T,200S,207R,208G,225S
JX447389	AA062b08L	Thailand	2005		genomic RNA	plasma AA062b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,111P,128D,178T,200S,207R,208G,225S
JX447403	AA063a_WG1	Thailand	2006		genomic RNA	plasma AA063a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,91N,92P,96L,148V,180D,200S,207T,208G,225S
JX447404	AA063a_WG11	Thailand	2006		genomic RNA	plasma AA063a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,91N,92P,96L,148V,180D,200S,207T,208G,225S
JX447405	AA063a_WG21	Thailand	2006		genomic RNA	plasma AA063a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,91N,92P,96L,148V,180D,200S,207T,208G,225S
JX447406	AA063a_WG22	Thailand	2006		genomic RNA	plasma AA063a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,91N,92P,96L,148V,180D,200S,207T,208G,225S
JX447407	AA063a_WG25	Thailand	2006		genomic RNA	plasma AA063a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,91N,92P,96L,148V,180D,200S,207T,208G,225S
JX447408	AA063a_WG35	Thailand	2006		genomic RNA	plasma AA063a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,91N,92P,96L,148V,180D,200S,207T,208G,225S
JX447409	AA063a_WG37	Thailand	2006		genomic RNA	plasma AA063a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,91N,92P,95QR,96L,148V,180D,200S,207T,208G,225S
JX447410	AA063a_WG38	Thailand	2006		genomic RNA	plasma AA063a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,91N,92P,96L,148V,180D,200S,207T,208G,225S
JX447411	AA063a_WG6	Thailand	2006		genomic RNA	plasma AA063a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,91N,92P,96L,148V,180D,200S,207T,208G,225S
JX447412	AA064a_WG1	Thailand	2005		genomic RNA	plasma AA064a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96I,116A,128D,148V,200S,207T,208G,225S
JX447413	AA064a_WG2	Thailand	2005		genomic RNA	plasma AA064a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96I,116A,128D,148V,200S,207T,208G,225S
JX447414	AA064a_WG3	Thailand	2005		genomic RNA	plasma AA064a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96I,111LP,116A,128D,148V,200S,207T,208G,225S
JX447415	AA064a_WG4	Thailand	2005		genomic RNA	plasma AA064a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96I,116A,128D,148V,200S,207T,208G,225S
JX447416	AA064a_WG5	Thailand	2005		genomic RNA	plasma AA064a	subtype: CRF01_AE	1	231	6A,14S,15L,28EG,31G,33N,54M,58I,87Q,92P,96I,116A,128D,148V,200S,207T,208G,225S
JX447420	AA065a01L	Thailand	2007		genomic RNA	plasma AA065a	subtype: CRF01_AE	1	231	6A,14P,15V,27I,31G,33N,54M,58I,71D,92P,96I,128D,148V,149G,154K,200S,207S,208G,225S
JX447421	AA065a02L	Thailand	2007		genomic RNA	plasma AA065a	subtype: CRF01_AE	1	231	6A,14P,15V,27I,31G,33N,54M,58I,71D,92P,96I,128D,148V,149G,200S,207T,208G,225S
JX447422	AA065a03L	Thailand	2007		genomic RNA	plasma AA065a	subtype: CRF01_AE	1	231	6A,14P,15V,27I,31G,33N,54M,58I,71D,92P,96I,128D,148V,149G,154K,200S,207T,208G,225S
JX447423	AA065a05L	Thailand	2007		genomic RNA	plasma AA065a	subtype: CRF01_AE	1	231	6A,14P,15V,27I,31G,33N,54M,58I,71D,92P,96I,128D,148V,149G,154K,200S,207T,208G,225S
JX447424	AA065a07L	Thailand	2007		genomic RNA	plasma AA065a	subtype: CRF01_AE	1	231	6A,14P,15V,27I,31G,33N,54M,58I,71D,92P,96I,128D,148V,149G,154K,200S,207T,208G,225S
JX447419	AA065a08L	Thailand	2007		genomic RNA	plasma AA065a	subtype: CRF01_AE	1	231	6A,14P,15V,27I,31G,33N,54M,58I,71D,92P,96I,128D,148V,149G,154K,200S,207T,208G,225S
JX447425	AA065a09L	Thailand	2007		genomic RNA	plasma AA065a	subtype: CRF01_AE	1	231	6A,14P,15V,27I,31G,33N,54M,58I,71D,92P,96I,128D,148V,149G,154K,200S,207T,208G,225S
JX447418	AA065a10L	Thailand	2007		genomic RNA	plasma AA065a	subtype: CRF01_AE	1	231	6A,14P,15V,27I,31G,33N,54M,58I,71D,92P,96I,128D,148V,149G,154K,200S,207T,208G,225S
JX447426	AA065a12L	Thailand	2007		genomic RNA	plasma AA065a	subtype: CRF01_AE	1	231	6A,14P,15V,27I,31G,33N,54M,58I,71D,92P,96I,128D,148V,149G,154K,200S,207T,208G,225S
JX447441	AA066a01L	Thailand	2005		genomic RNA	plasma AA066a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G
JX447442	AA066a02L	Thailand	2005		genomic RNA	plasma AA066a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G
JX447446	AA066a03L	Thailand	2005		genomic RNA	plasma AA066a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G
JX447443	AA066a04L	Thailand	2005		genomic RNA	plasma AA066a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G
JX447444	AA066a05L	Thailand	2005		genomic RNA	plasma AA066a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G
JX447445	AA066a06L	Thailand	2005		genomic RNA	plasma AA066a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G
JX447440	AA066a07L	Thailand	2005		genomic RNA	plasma AA066a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G
JX447455	AA067a_WG1	Thailand	2008		genomic RNA	plasma AA067a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,123S,128D,148V,178T,200S,207T,208G,225S
JX447456	AA067a_WG10	Thailand	2008		genomic RNA	plasma AA067a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,123S,128D,148V,178T,200S,207T,208G,225S
JX447457	AA067a_WG11	Thailand	2008		genomic RNA	plasma AA067a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,123S,128D,142IV,148V,178T,200S,207T,208G,225S
JX447458	AA067a_WG12	Thailand	2008		genomic RNA	plasma AA067a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,123S,128D,148V,178T,200S,207T,208G,225S
JX447459	AA067a_WG13	Thailand	2008		genomic RNA	plasma AA067a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,123S,128D,148V,178T,200S,207T,208G,225S
JX447454	AA067A_WG17	Thailand	2008		genomic RNA	plasma AA067a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,123S,128D,148V,178T,200S,207T,208G,225S
JX447460	AA067a_WG4	Thailand	2008		genomic RNA	plasma AA067a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,123S,128D,148V,178T,200S,207T,208G,225S
JX447461	AA067a_WG5	Thailand	2008		genomic RNA	plasma AA067a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,123S,128D,148V,178T,200S,201FI,207T,208G,225S
JX447462	AA067a_WG7	Thailand	2008		genomic RNA	plasma AA067a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,123S,128D,148V,178T,200S,207T,208G,225S
JX447463	AA067a_WG8	Thailand	2008		genomic RNA	plasma AA067a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,123S,128D,148V,178T,200S,207T,208G,225S
JX447464	AA067a_WG9	Thailand	2008		genomic RNA	plasma AA067a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,123S,128D,148V,178T,200S,207T,208G,225S
JX447465	AA068a_14	Thailand	2006		genomic RNA	plasma AA068a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,92P,110N,120S,128D,148I,180D,200S,207T,208G,225S
JX447466	AA068a_15	Thailand	2006		genomic RNA	plasma AA068a	subtype: CRF01_AE	1	231	6A,10MV,14P,15V,31G,33N,54M,58I,83I,92P,110N,120S,128D,148V,149G,178T,200S,207T,208G,225S
JX447467	AA068a_21	Thailand	2006		genomic RNA	plasma AA068a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,92P,110N,120S,128D,148V,180D,200S,207T,208G,225S
JX447468	AA068a_22	Thailand	2006		genomic RNA	plasma AA068a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,92P,110N,120S,128D,148V,180D,200S,207T,208G,225S
JX447469	AA068a_23	Thailand	2006		genomic RNA	plasma AA068a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33NS,54M,58I,83I,92P,110N,120S,128D,148V,180D,200S,207T,208G,225S
JX447471	AA068a_24	Thailand	2006		genomic RNA	plasma AA068a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,92P,110N,120S,128D,148V,178T,200S,207T,208G,225S
JX447472	AA068a_26	Thailand	2006		genomic RNA	plasma AA068a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,92P,110N,120S,128D,148V,178T,200S,207T,208G,225S
JX447473	AA068a_29	Thailand	2006		genomic RNA	plasma AA068a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,92P,110N,120S,128D,148V,180D,200S,207T,208G,225S
JX447474	AA068a_31	Thailand	2006		genomic RNA	plasma AA068a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,92P,110N,120S,128D,148V,180D,200S,207T,208G,225S
JX447470	AA068a_57	Thailand	2006		genomic RNA	plasma AA068a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,92P,110N,120S,128D,148V,180D,200S,207T,208G,225S
JX447479	AA069a01L	Thailand	2007		genomic RNA	plasma AA069a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,120S,128D,148V,149G,154K,200S,207T,208G,225S
JX447478	AA069a02L	Thailand	2007		genomic RNA	plasma AA069a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83L,92P,120S,128D,148V,149G,200S,207T,208G,225S
JX447477	AA069a03L	Thailand	2007		genomic RNA	plasma AA069a	subtype: CRF01_AE	1	231	6A,14S,15L,21K,31G,33N,54M,58I,83L,92P,120S,128D,148V,149G,154K,200S,207T,208G,225S
JX447476	AA069a04L	Thailand	2007		genomic RNA	plasma AA069a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83L,92P,120S,128D,148V,149G,154K,200S,207T,208G,225S
JX447475	AA069a05L	Thailand	2007		genomic RNA	plasma AA069a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,120S,128D,148V,149G,200S,207T,208G,225S
JX447486	AA070a_LH01	Thailand	2008		genomic RNA	plasma AA070a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83L,92P,120G,123A,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX447487	AA070a_LH02	Thailand	2008		genomic RNA	plasma AA070a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83L,92P,120G,123A,128D,148V,149G,154K,178T,200S,207T,208G,219LQ,225S
JX447488	AA070a_LH04	Thailand	2008		genomic RNA	plasma AA070a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83L,92P,120G,123A,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX447489	AA070a_LH05	Thailand	2008		genomic RNA	plasma AA070a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83L,92P,120G,123A,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX447490	AA070a_LH06	Thailand	2008		genomic RNA	plasma AA070a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83L,92P,120G,123A,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX447491	AA070a_LH07	Thailand	2008		genomic RNA	plasma AA070a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83L,92P,120G,123A,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX447492	AA070a_LH09	Thailand	2008		genomic RNA	plasma AA070a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83L,92P,120G,123A,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX447506	AA072a01	Thailand	2007		genomic RNA	plasma AA072a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,91F,92P,96I,116A,120S,128D,139H,148V,178T,200S,207T,208G,210S,225S
JX447505	AA072a02	Thailand	2007		genomic RNA	plasma AA072a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,91F,92P,96I,116A,120S,128D,139H,148V,178T,200S,207T,208G,210S,225S
JX447503	AA072a03	Thailand	2007		genomic RNA	plasma AA072a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,91F,92P,96I,116A,120S,128D,139H,148V,178T,200S,207T,208G,210S,225S
JX447504	AA072a05	Thailand	2007		genomic RNA	plasma AA072a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,91F,92P,96I,116A,120S,128D,139H,148V,178T,200S,207T,208G,210S,213EG,225S
JX447508	AA072a06	Thailand	2007		genomic RNA	plasma AA072a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,91F,92P,96I,116A,120S,128D,139H,148V,178T,200S,207T,208G,210S,225S
JX447507	AA072a07	Thailand	2007		genomic RNA	plasma AA072a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,91F,92P,96I,116A,120S,128D,139H,148V,178T,200S,207T,208G,210S,225S
JX447500	AA072a08	Thailand	2007		genomic RNA	plasma AA072a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,91F,92P,96I,116A,120S,128D,139H,148V,178T,200S,207T,208G,210S,225S
JX447499	AA072a09	Thailand	2007		genomic RNA	plasma AA072a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,91F,92P,96I,116A,120S,128D,139H,148V,178T,200S,207T,208G,210S,225S
JX447502	AA072a10	Thailand	2007		genomic RNA	plasma AA072a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,91F,92P,96I,116A,120S,128D,139H,148V,178T,200S,207T,208G,210S,225S
JX447501	AA072a11	Thailand	2007		genomic RNA	plasma AA072a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,91F,92P,96I,116A,120S,128D,139H,148V,178T,200S,207T,208G,210S,225S
JX447509	AA073a_LH1	Thailand	2006		genomic RNA	plasma AA073a	subtype: CRF01_AE	1	231	6A,11I,14S,27I,31G,54M,58I,87Q,92P,96I,115M,116T,128D,148V,171V,178T,200S,207T,208G,225S
JX447510	AA073a_LH3	Thailand	2006		genomic RNA	plasma AA073a	subtype: CRF01_AE	1	231	6A,11I,12HY,14S,27I,31G,54M,58I,87Q,88V,92P,96I,115M,116T,128D,130CY,148V,171V,178T,200S,207T,208G,225S
JX447511	AA073a_LH4	Thailand	2006		genomic RNA	plasma AA073a	subtype: CRF01_AE	2	231	6A,11I,14S,27I,31G,54M,58I,87Q,92P,96I,115M,116T,128D,148V,171V,178T,200S,207T,208G,225S
JX447512	AA073a_LH5	Thailand	2006		genomic RNA	plasma AA073a	subtype: CRF01_AE	1	231	6A,11I,14S,27I,31G,54M,58I,87Q,92P,96I,115M,116T,128D,148V,171V,178T,200S,207T,208G,225S
JX447513	AA073a_LH6	Thailand	2006		genomic RNA	plasma AA073a	subtype: CRF01_AE	1	231	6A,11I,14S,27I,31G,54M,58I,87Q,92P,96I,115M,116T,128D,148V,171V,178T,200S,207T,208G,225S
JX447514	AA073a_LH9	Thailand	2006		genomic RNA	plasma AA073a	subtype: CRF01_AE	1	231	6A,11I,14S,27I,31G,54M,58I,87Q,92P,96I,115M,116T,128D,148V,155QR,171V,178T,200S,207T,208G,225S
JX447524	AA074a01L	Thailand	2004		genomic RNA	plasma AA074a	subtype: CRF01_AE	1	231	3I,6A,11A,14P,15L,31G,33N,54M,58I,61E,83L,92P,128D,146R,148V,154K,178T,183S,200S,207T,208G,225S
JX447525	AA074a02L	Thailand	2004		genomic RNA	plasma AA074a	subtype: CRF01_AE	1	231	3I,6A,11A,14P,15L,31G,33N,54M,58I,61E,83L,92P,128D,146R,148V,154K,178T,183S,200S,207T,208G,225S
JX447526	AA074a03L	Thailand	2004		genomic RNA	plasma AA074a	subtype: CRF01_AE	1	231	3I,6A,11A,14P,15L,31G,33N,54M,58I,61E,83L,92P,128D,146R,148V,154K,178T,183S,200S,207T,208G,225S
JX447527	AA074a04L	Thailand	2004		genomic RNA	plasma AA074a	subtype: CRF01_AE	1	231	3I,6A,11A,14P,15L,31G,33N,54M,58I,61E,83L,92P,128D,146R,148V,154K,178T,183S,200S,207T,208G,225S
JX447528	AA074a05L	Thailand	2004		genomic RNA	plasma AA074a	subtype: CRF01_AE	1	231	3I,6A,11A,14P,15L,31G,33N,54M,58I,61E,83L,92P,128D,146R,148V,154K,178T,183S,200S,207T,208G,209V,225S
JX447523	AA074a07L	Thailand	2004		genomic RNA	plasma AA074a	subtype: CRF01_AE	1	231	3I,6A,11A,14P,15L,31G,33N,54M,58I,61E,83L,92P,128D,146R,148V,154K,178T,183S,200S,207T,208G,225S
JX447535	AA075a_WG10	Thailand	2004		genomic RNA	plasma AA075a	subtype: CRF01_AE	1	231	6A,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447536	AA075a_WG12	Thailand	2004		genomic RNA	plasma AA075a	subtype: CRF01_AE	1	231	6A,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447537	AA075a_WG15	Thailand	2004		genomic RNA	plasma AA075a	subtype: CRF01_AE	1	231	6A,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447538	AA075a_WG2	Thailand	2004		genomic RNA	plasma AA075a	subtype: CRF01_AE	1	231	6A,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447544	AA075a_wG3	Thailand	2004		genomic RNA	plasma AA075a	subtype: CRF01_AE	1	231	6A,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447539	AA075a_WG4	Thailand	2004		genomic RNA	plasma AA075a	subtype: CRF01_AE	1	231	6A,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447540	AA075a_WG5	Thailand	2004		genomic RNA	plasma AA075a	subtype: CRF01_AE	1	231	6A,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447541	AA075a_WG6	Thailand	2004		genomic RNA	plasma AA075a	subtype: CRF01_AE	1	231	6A,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447542	AA075a_WG7	Thailand	2004		genomic RNA	plasma AA075a	subtype: CRF01_AE	1	231	6A,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447543	AA075a_WG8	Thailand	2004		genomic RNA	plasma AA075a	subtype: CRF01_AE	1	231	6A,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447545	AA076a01L	Thailand	2006		genomic RNA	plasma AA076a	subtype: CRF01_AE	1	231	6A,14P,33N,38L,54M,58I,86A,87Q,92P,96L,110N,120S,128D,178T,200S,207T,208G,225S
JX447548	AA076a02L	Thailand	2006		genomic RNA	plasma AA076a	subtype: CRF01_AE	1	231	6A,14P,33N,54M,58I,86A,87Q,92P,96L,110N,120S,128D,178T,200S,207T,208G,225S
JX447547	AA076a03L	Thailand	2006		genomic RNA	plasma AA076a	subtype: CRF01_AE	1	231	6A,14P,33N,54M,58I,86A,87Q,92P,96L,110N,120S,128D,178T,200S,207T,208G,225S
JX447549	AA076a04L	Thailand	2006		genomic RNA	plasma AA076a	subtype: CRF01_AE	1	231	6A,14P,33N,54M,58I,86A,87Q,92P,96L,110N,120S,128D,178T,200S,207T,208G,225S
JX447546	AA076a05L	Thailand	2006		genomic RNA	plasma AA076a	subtype: CRF01_AE	1	231	6A,14P,33N,54M,58I,86A,87Q,92P,96L,110N,120S,128D,178T,200S,207T,208G,225S
JX447560	AA077a_LH33	Thailand	2005		genomic RNA	plasma AA077a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447556	AA077a_LH37	Thailand	2005		genomic RNA	plasma AA077a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447557	AA077a_LH38	Thailand	2005		genomic RNA	plasma AA077a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,197DG,200S,207T,208G,225S
JX447558	AA077a_LH40	Thailand	2005		genomic RNA	plasma AA077a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447559	AA077A_WG1	Thailand	2005		genomic RNA	plasma AA077a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447574	AA078a01L	Thailand	2005		genomic RNA	plasma AA078a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447575	AA078a02L	Thailand	2005		genomic RNA	plasma AA078a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447576	AA078a03L	Thailand	2005		genomic RNA	plasma AA078a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,183H,200S,207T,208G,225S
JX447577	AA078a05L	Thailand	2005		genomic RNA	plasma AA078a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447578	AA078a06L	Thailand	2005		genomic RNA	plasma AA078a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447572	AA078a07L	Thailand	2005		genomic RNA	plasma AA078a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447571	AA078a08L	Thailand	2005		genomic RNA	plasma AA078a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447570	AA078a09L	Thailand	2005		genomic RNA	plasma AA078a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447573	AA078a10L	Thailand	2005		genomic RNA	plasma AA078a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447569	AA078a11L	Thailand	2005		genomic RNA	plasma AA078a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,183H,200S,207T,208G,225S
JX447589	AA079a_WG1	Thailand	2005		genomic RNA	plasma AA079a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,41T,54M,58I,83I,87Q,92P,96I,120S,148V,178T,200S,207T,208G,225A
JX447590	AA079a_WG2	Thailand	2005		genomic RNA	plasma AA079a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,41T,54M,58I,83I,87Q,92P,96I,120S,148V,178T,200S,207T,208G,225A
JX447591	AA079a_WG3	Thailand	2005		genomic RNA	plasma AA079a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,41T,54M,58I,83I,87Q,92P,96I,120S,148V,178T,200S,207T,208G,225A
JX447592	AA079a_WG4	Thailand	2005		genomic RNA	plasma AA079a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,41T,54M,58I,83I,87Q,92P,96I,120S,148V,178T,200S,207T,208G,225A
JX447593	AA079a_WG5	Thailand	2005		genomic RNA	plasma AA079a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,41T,54M,58I,77AV,83I,87Q,92P,96I,120S,148V,178T,200S,207T,208G,225A
JX447594	AA079a_WG6	Thailand	2005		genomic RNA	plasma AA079a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,41T,54M,58I,83I,87Q,92P,96I,120S,148V,178T,200S,207T,208G,225A
JX447595	AA079a_WG7	Thailand	2005		genomic RNA	plasma AA079a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,41T,54M,58I,83I,87Q,92P,96I,120S,148V,178T,200S,207T,208G,225A
JX447598	AA080a02L	Thailand	2007		genomic RNA	plasma AA080a	subtype: CRF01_AE	1	231	6A,14P,15M,31G,33N,54M,58I,79D,87Q,92P,96L,128D,146N,148V,178T,200S,203R,207T,208G,225S
JX447599	AA080a03L	Thailand	2007		genomic RNA	plasma AA080a	subtype: CRF01_AE	1	231	6A,14P,15M,31G,33N,54M,58I,79D,87Q,92P,96L,128D,146N,148V,178T,200S,203R,207T,208G,225S
JX447600	AA080a04L	Thailand	2007		genomic RNA	plasma AA080a	subtype: CRF01_AE	1	231	6A,14P,15M,31G,33N,54M,58I,79D,87Q,92P,96L,128D,146N,148V,178T,200S,203R,207T,208G,225S
JX447601	AA080a05L	Thailand	2007		genomic RNA	plasma AA080a	subtype: CRF01_AE	1	231	6A,14P,15M,31G,33N,54M,58I,79D,87Q,92P,96L,128D,146N,148V,178T,200S,203R,207T,208G,225S
JX447602	AA080a06L	Thailand	2007		genomic RNA	plasma AA080a	subtype: CRF01_AE	1	231	6A,14P,15M,31G,33N,54M,58I,79D,87Q,92P,96L,128D,146N,148V,178T,200S,203R,207T,208G,225S
JX447607	AA080a07L	Thailand	2007		genomic RNA	plasma AA080a	subtype: CRF01_AE	1	231	6A,14P,15M,31G,33N,54M,58I,79D,87Q,92P,96L,128D,146N,148V,178T,200S,203R,207T,208G,225S
JX447604	AA080a08L	Thailand	2007		genomic RNA	plasma AA080a	subtype: CRF01_AE	1	231	6A,14P,15M,31G,33N,54M,58I,79D,87Q,92P,96L,128D,146N,148V,178T,200S,203R,207T,208G,225S
JX447603	AA080a10L	Thailand	2007		genomic RNA	plasma AA080a	subtype: CRF01_AE	1	231	6A,14P,15M,31G,33N,54M,58I,79D,87Q,92P,96L,128D,146N,148V,178T,200S,203R,207T,208G,225S
JX447605	AA080a11L	Thailand	2007		genomic RNA	plasma AA080a	subtype: CRF01_AE	1	231	6A,14P,15M,31G,33N,54M,58I,79D,87Q,92P,96L,128D,146N,148V,178T,200S,203R,207T,208G,225S
JX447596	AA080a12L	Thailand	2007		genomic RNA	plasma AA080a	subtype: CRF01_AE	1	231	6A,14P,15M,31G,33N,54M,58I,79D,87Q,92P,96L,128D,146N,148V,178T,200S,203R,207T,208G,225S
JX447597	AA080a13L	Thailand	2007		genomic RNA	plasma AA080a	subtype: CRF01_AE	1	231	6A,14P,15M,31G,33N,54M,58I,79D,87Q,92P,96L,128D,146N,148V,178T,200S,203R,207T,208G,225S
JX447606	AA080a15L	Thailand	2007		genomic RNA	plasma AA080a	subtype: CRF01_AE	1	231	6A,14P,15M,31G,33N,54M,58I,79D,87Q,92P,96L,128D,146N,148V,178T,200S,203R,207T,208G,225S
JX447621	AA081a_01L	Thailand	2005		genomic RNA	plasma AA081a	subtype: CRF01_AE	1	231	6A,9A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207S,208G,225S
JX447622	AA081a_02L	Thailand	2005		genomic RNA	plasma AA081a	subtype: CRF01_AE	1	231	6A,9A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207S,208G,225S
JX447623	AA081a_03L	Thailand	2005		genomic RNA	plasma AA081a	subtype: CRF01_AE	1	231	6A,9A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207S,208G,225S
JX447624	AA081a_05L	Thailand	2005		genomic RNA	plasma AA081a	subtype: CRF01_AE	1	231	6A,9A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207S,208G,225S
JX447625	AA081a_06L	Thailand	2005		genomic RNA	plasma AA081a	subtype: CRF01_AE	1	231	6A,9A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207S,208G,225S
JX447626	AA081a_07L	Thailand	2005		genomic RNA	plasma AA081a	subtype: CRF01_AE	1	231	6A,9A,14P,15L,31G,33N,49T,54M,58I,92P,128D,148V,178T,200S,207S,208G,225S
JX447627	AA081a_11L	Thailand	2005		genomic RNA	plasma AA081a	subtype: CRF01_AE	1	231	6A,9A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207S,208G,225S
JX447628	AA081a_12L	Thailand	2005		genomic RNA	plasma AA081a	subtype: CRF01_AE	1	231	6A,9A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207S,208G,225S
JX447620	AA081a13	Thailand	2005		genomic RNA	plasma AA081a	subtype: CRF01_AE	1	231	6A,9A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207S,208G,225S
JX447619	AA081a14	Thailand	2005		genomic RNA	plasma AA081a	subtype: CRF01_AE	1	231	6A,9A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207S,208G,225S
JX447618	AA081a15	Thailand	2005		genomic RNA	plasma AA081a	subtype: CRF01_AE	1	231	6A,9A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207S,208G,225S
JX447637	AA082a_WG1	Thailand	2006		genomic RNA	plasma AA082a	subtype: CRF01_AE	1	231	6A,11T,15V,31G,33N,54M,58I,61D,83L,87Q,92P,120S,128D,146K,148V,154K,163E,178T,200A,207T,208G,225S
JX447638	AA082a_WG10	Thailand	2006		genomic RNA	plasma AA082a	subtype: CRF01_AE	1	231	6A,11T,15V,31G,33N,54M,58I,61D,83L,87Q,92P,120S,128D,146K,148V,154K,163E,178T,200A,207T,208G,225S
JX447639	AA082a_WG11	Thailand	2006		genomic RNA	plasma AA082a	subtype: CRF01_AE	1	231	6A,11T,15V,31G,33N,54M,58I,61D,83L,87Q,92P,120S,128D,146K,148V,154K,163E,178T,200A,207T,208G,225S
JX447640	AA082a_WG12	Thailand	2006		genomic RNA	plasma AA082a	subtype: CRF01_AE	1	231	6A,11T,15V,31G,33N,54M,58I,61D,83L,87Q,92P,120S,128D,146K,148V,154K,163E,178T,200A,207T,208G,225S
JX447641	AA082a_WG2	Thailand	2006		genomic RNA	plasma AA082a	subtype: CRF01_AE	1	231	6A,11T,15V,30KR,31G,33N,54M,58I,61D,83L,87Q,92P,104IV,120S,128D,146K,148V,154K,163E,178T,200A,207T,208G,225S
JX447642	AA082a_WG3	Thailand	2006		genomic RNA	plasma AA082a	subtype: CRF01_AE	1	231	6A,11T,15V,31G,33N,54M,58I,61D,83L,87Q,92P,120S,128D,146K,148V,154K,163E,178T,200A,207T,208G,225S
JX447643	AA082a_WG4	Thailand	2006		genomic RNA	plasma AA082a	subtype: CRF01_AE	1	231	6A,11T,15V,31G,33N,54M,58I,61D,83L,87Q,92P,120S,128D,146K,148V,154K,163E,178T,200A,207T,208G,225S
JX447644	AA082a_WG6	Thailand	2006		genomic RNA	plasma AA082a	subtype: CRF01_AE	1	231	6A,11T,15V,31G,33N,54M,58I,61D,83L,87Q,92P,120S,128D,146K,148V,154K,163E,178T,200A,207T,208G,225S
JX447645	AA082a_WG8	Thailand	2006		genomic RNA	plasma AA082a	subtype: CRF01_AE	1	231	6A,11T,15V,31G,33N,54M,58I,61D,83L,87Q,92P,120S,128D,146K,148V,154K,163E,178T,200A,207T,208G,225S
JX447646	AA082a_WG9	Thailand	2006		genomic RNA	plasma AA082a	subtype: CRF01_AE	1	231	6A,11T,15V,31G,33N,54M,58I,61D,83L,87Q,92P,120S,128D,146K,148V,154K,163E,178T,200A,207T,208G,225S
JX447648	AA083a01L	Thailand	2006		genomic RNA	plasma AA083a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,96I,128D,165I,178T,200A,207R,208G,225S
JX447649	AA083a02L	Thailand	2006		genomic RNA	plasma AA083a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,96I,128D,165I,178T,200A,207R,208G,225S
JX447650	AA083a03L	Thailand	2006		genomic RNA	plasma AA083a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,96I,128D,165I,178T,200A,207R,208G,225S
JX447651	AA083a04L	Thailand	2006		genomic RNA	plasma AA083a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,96I,128D,165I,178T,200A,207R,208G,225S
JX447652	AA083a06L	Thailand	2006		genomic RNA	plasma AA083a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,96I,128D,165I,178T,200A,207R,208G,225S
JX447653	AA083a07L	Thailand	2006		genomic RNA	plasma AA083a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,96I,128D,165I,178T,200A,207R,208G,225S
JX447654	AA083a08L	Thailand	2006		genomic RNA	plasma AA083a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,96I,128D,165I,178T,200A,207R,208G,225S
JX447655	AA083a09L	Thailand	2006		genomic RNA	plasma AA083a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,96I,128D,165I,178T,200A,207R,208G,225S
JX447656	AA083a10L	Thailand	2006		genomic RNA	plasma AA083a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,96I,128D,165I,178T,200A,207R,208G,225S
JX447647	AA083a11L	Thailand	2006		genomic RNA	plasma AA083a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,96I,128D,165I,178T,200A,207R,208G,225S
JX447670	AA084a_wg1	Thailand	2006		genomic RNA	plasma AA084a	subtype: E/B	1	231	6A,11T,15V,31G,33N,54M,58I,83M,86I,128D,148V,154K,178T,200S,207T,208G,225S
JX447668	AA084a_WG10	Thailand	2006		genomic RNA	plasma AA084a	subtype: E/B	1	231	6A,11T,15V,31G,33N,54M,58I,83M,86I,128D,148V,154K,178T,179QR,200S,207T,208G,225S
JX447671	AA084a_wg2	Thailand	2006		genomic RNA	plasma AA084a	subtype: E/B	1	231	6A,11T,15V,31G,33N,54M,58I,83M,86I,128D,148V,154K,178T,200S,207T,208G,225S
JX447672	AA084a_wg3	Thailand	2006		genomic RNA	plasma AA084a	subtype: E/B	1	231	6A,11T,15V,31G,33N,54M,58I,83M,86I,128D,148V,154K,178T,200S,207T,208G,225S
JX447673	AA084a_wg4	Thailand	2006		genomic RNA	plasma AA084a	subtype: E/B	1	231	6A,11T,15V,31G,33N,54M,58I,83M,86I,128D,148V,154K,178T,200S,207T,208G,225S
JX447674	AA084a_wg5	Thailand	2006		genomic RNA	plasma AA084a	subtype: E/B	1	231	6A,11T,15V,31G,33N,54M,58I,83M,86I,128D,148V,154K,178T,200S,207T,208G,225S
JX447675	AA084a_wg6	Thailand	2006		genomic RNA	plasma AA084a	subtype: E/B	1	231	6A,11T,15V,31G,33N,54M,58I,83M,86I,128D,148V,154K,178T,200S,207T,208G,225S
JX447676	AA084a_wg7	Thailand	2006		genomic RNA	plasma AA084a	subtype: E/B	1	231	6A,11T,15V,31G,33N,54M,58I,83M,86I,128D,148V,154K,178T,200S,207T,208G,225S
JX447677	AA084a_wg8	Thailand	2006		genomic RNA	plasma AA084a	subtype: E/B	1	231	6A,11T,15V,31G,33N,54M,58I,83M,86I,128D,148V,154K,178T,200S,207T,208G,225S
JX447669	AA084a_WG9	Thailand	2006		genomic RNA	plasma AA084a	subtype: E/B	1	231	6A,11T,15V,31G,33N,54M,58I,83M,86I,128D,148V,154K,178T,200S,207T,208G,225S
JX447678	AA085a_wg1	Thailand	2006		genomic RNA	plasma AA085a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,92P,120S,121T,128D,148V,178T,204S,207T,208G,225S
JX447679	AA085a_wg10	Thailand	2006		genomic RNA	plasma AA085a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,92P,120S,121T,128D,148V,178T,201IT,204S,207T,208G,210AT,225S
JX447681	AA085a_wg15	Thailand	2006		genomic RNA	plasma AA085a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,92P,120S,121T,128D,148V,178T,204S,207T,208G,225S
JX447682	AA085a_wg2	Thailand	2006		genomic RNA	plasma AA085a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,92P,120S,121T,128D,148V,178T,204S,207T,208G,225S
JX447683	AA085a_wg3	Thailand	2006		genomic RNA	plasma AA085a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,92P,120S,121T,128D,148V,178T,204S,207T,208G,225S
JX447684	AA085a_wg4	Thailand	2006		genomic RNA	plasma AA085a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,36AV,54M,58I,83I,92P,120S,121T,128D,148V,178T,204S,207T,208G,225S
JX447685	AA085a_wg6	Thailand	2006		genomic RNA	plasma AA085a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,92P,120S,121T,128D,148V,178T,204S,207T,208G,225S
JX447686	AA085a_wg8	Thailand	2006		genomic RNA	plasma AA085a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,92P,120S,121T,128D,148V,178T,204S,207T,208G,225S
JX447687	AA085a_wg9	Thailand	2006		genomic RNA	plasma AA085a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83I,92P,120S,121T,128D,141IV,148V,178T,204S,207T,208G,225S
JX447689	AA086a01L	Thailand	2006		genomic RNA	plasma AA086a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
JX447690	AA086a02L	Thailand	2006		genomic RNA	plasma AA086a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
JX447691	AA086a03L	Thailand	2006		genomic RNA	plasma AA086a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
JX447698	AA086a04L	Thailand	2006		genomic RNA	plasma AA086a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
JX447692	AA086a05L	Thailand	2006		genomic RNA	plasma AA086a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
JX447693	AA086a06L	Thailand	2006		genomic RNA	plasma AA086a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
JX447694	AA086a07L	Thailand	2006		genomic RNA	plasma AA086a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
JX447695	AA086a08L	Thailand	2006		genomic RNA	plasma AA086a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
JX447697	AA086a09L	Thailand	2006		genomic RNA	plasma AA086a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,128D,133L,148V,178T,200S,207T,208G,225S
JX447696	AA086a10L	Thailand	2006		genomic RNA	plasma AA086a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
JX447688	AA086a11L	Thailand	2006		genomic RNA	plasma AA086a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,178T,200S,207T,208G,225S
JX447709	AA088a_wg11	Thailand	2006		genomic RNA	plasma AA088a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,79D,87Q,92P,96I,110N,116T,120S,148V,149G,153V,200S,207T,208G,225S
JX447710	AA088a_wg12	Thailand	2006		genomic RNA	plasma AA088a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,86A,87Q,92P,96I,110N,116T,120S,148V,149G,200S,207T,208G,225S
JX447711	AA088a_wg13	Thailand	2006		genomic RNA	plasma AA088a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96I,110N,116T,120S,148V,149G,153V,200S,207T,208G,225S
JX447712	AA088a_wg14	Thailand	2006		genomic RNA	plasma AA088a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96I,110N,116T,120S,148V,149G,153V,200S,207T,208G,225S
JX447713	AA088a_wg16	Thailand	2006		genomic RNA	plasma AA088a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96I,110N,116T,120S,148V,149G,153V,200S,207T,208G,225S
JX447714	AA088a_wg17	Thailand	2006		genomic RNA	plasma AA088a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96I,110N,116T,120S,148V,149G,153V,187EG,200S,207T,208G,225S
JX447715	AA088a_wg18	Thailand	2006		genomic RNA	plasma AA088a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,83A,87Q,92P,96I,110N,116T,120S,148V,149G,153V,200S,207T,208G,225S
JX447716	AA088a_wg19	Thailand	2006		genomic RNA	plasma AA088a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96I,110N,116T,120S,148V,149G,153V,200S,207T,208G,225S
JX447717	AA088a_wg3	Thailand	2006		genomic RNA	plasma AA088a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96I,110N,116T,120S,148V,149G,153V,200S,207T,208G,225S
JX447718	AA088a_wg4	Thailand	2006		genomic RNA	plasma AA088a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96I,110N,116T,120S,148V,149G,153V,200S,207T,208G,225S
JX447719	AA088a_wg7	Thailand	2006		genomic RNA	plasma AA088a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96I,110N,116T,120S,148V,149G,153V,200S,207T,208G,225S
JX447720	AA088a_wg9	Thailand	2006		genomic RNA	plasma AA088a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96I,110N,116T,120S,148V,149G,153V,200S,207T,208G,225S
JX447725	AA089a01	Thailand	2007		genomic RNA	plasma AA089a	subtype: CRF01_AE	1	231	6T,14P,15L,27I,31G,33N,54M,58I,71D,92P,120G,123S,128D,148V,178T,200S,207T,208G,225S
JX447724	AA089a02	Thailand	2007		genomic RNA	plasma AA089a	subtype: CRF01_AE	1	231	6T,14P,15L,27I,31G,33N,54M,58I,71D,92P,120G,123S,128D,148V,178T,200S,207T,208G,225S
JX447723	AA089a03	Thailand	2007		genomic RNA	plasma AA089a	subtype: CRF01_AE	1	231	6T,14P,15L,27I,31G,33N,54M,58I,71D,92P,120G,123S,128D,148V,178T,200S,207T,208G,225S
JX447722	AA089a04	Thailand	2007		genomic RNA	plasma AA089a	subtype: CRF01_AE	1	231	6T,14P,15L,27I,31G,33N,54M,58I,71D,92P,120G,123S,128D,148V,178T,200S,207T,208G,225S
JX447721	AA089a05	Thailand	2007		genomic RNA	plasma AA089a	subtype: CRF01_AE	1	231	6T,14P,15L,27I,31G,33N,54M,58I,71D,92P,120G,123S,128D,148V,178T,200S,207T,208G,225S
JX447726	AA090a_WG1	Thailand	2009		genomic RNA	plasma AA090a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,110N,116A,120G,123G,128D,148V,178T,200S,207T,208G,225S
JX447727	AA090a_WG11	Thailand	2009		genomic RNA	plasma AA090a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,110N,116A,120G,123T,128D,148V,178T,200S,207T,208G,225S
JX447728	AA090a_WG12	Thailand	2009		genomic RNA	plasma AA090a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,110N,116A,120G,123T,128D,148V,178T,200S,207T,208G,225S
JX447729	AA090a_WG2	Thailand	2009		genomic RNA	plasma AA090a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,110N,116A,120G,123T,128D,148V,178T,200S,207T,208G,225S
JX447730	AA090a_WG3	Thailand	2009		genomic RNA	plasma AA090a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,110N,116A,120G,123T,128D,148V,178T,200S,207T,208G,225S
JX447731	AA090a_WG5	Thailand	2009		genomic RNA	plasma AA090a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,101R,110N,116A,120G,123T,128D,148V,178T,200S,207T,208G,225S
JX447732	AA090a_WG6	Thailand	2009		genomic RNA	plasma AA090a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,110N,116A,120G,123T,128D,148V,178T,200S,207T,208G,225S
JX447733	AA090a_WG7	Thailand	2009		genomic RNA	plasma AA090a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,110N,116A,120G,123T,128D,148V,178T,200S,207T,208G,225S
JX447734	AA090a_WG8	Thailand	2009		genomic RNA	plasma AA090a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,110N,116A,120G,123A,128D,129L,148V,178T,200S,207T,208G,225S
JX447735	AA090a_WG9	Thailand	2009		genomic RNA	plasma AA090a	subtype: CRF01_AE	1	231	6A,14P,15L,25~,31G,33N,54M,58I,83L,92P,110N,116A,120G,123T,128D,148V,178T,200S,207T,208G,225S
JX447736	AA091a01L	Thailand	2007		genomic RNA	plasma AA091a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,210S,225S
JX447737	AA091a02L	Thailand	2007		genomic RNA	plasma AA091a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,210S,225S
JX447738	AA091a03L	Thailand	2007		genomic RNA	plasma AA091a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,185T,200S,207S,208G,210S,225S
JX447739	AA091a04L	Thailand	2007		genomic RNA	plasma AA091a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,210S,225S
JX447740	AA091a05L	Thailand	2007		genomic RNA	plasma AA091a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207S,208G,210S,225S
JX447741	AA091a06L	Thailand	2007		genomic RNA	plasma AA091a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,210S,225S
JX447742	AA091a07L	Thailand	2007		genomic RNA	plasma AA091a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,210S,225S
JX447743	AA091a08L	Thailand	2007		genomic RNA	plasma AA091a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,210S,225S
JX447744	AA091a09L	Thailand	2007		genomic RNA	plasma AA091a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,210S,225S
JX447745	AA091a10L	Thailand	2007		genomic RNA	plasma AA091a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207S,208G,210S,225S
JX447761	AA092a01L	Thailand	2007		genomic RNA	plasma AA092a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,110N,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447765	AA092a02L	Thailand	2007		genomic RNA	plasma AA092a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,110N,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447762	AA092a03L	Thailand	2007		genomic RNA	plasma AA092a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,110N,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447763	AA092a04L	Thailand	2007		genomic RNA	plasma AA092a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,110N,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447764	AA092a05L	Thailand	2007		genomic RNA	plasma AA092a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,112P,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447760	AA092b01L	Thailand	2007		genomic RNA	plasma AA092b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,110N,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447767	AA092b02L	Thailand	2007		genomic RNA	plasma AA092b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,100G,110N,118MV,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447766	AA092b03L	Thailand	2007		genomic RNA	plasma AA092b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,110N,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447769	AA092b04L	Thailand	2007		genomic RNA	plasma AA092b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,110N,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447768	AA092b05L	Thailand	2007		genomic RNA	plasma AA092b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,110N,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447770	AA092b06L	Thailand	2007		genomic RNA	plasma AA092b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,110N,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447771	AA092b07L	Thailand	2007		genomic RNA	plasma AA092b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,110N,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447772	AA092b08L	Thailand	2007		genomic RNA	plasma AA092b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,110N,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447759	AA092b10L	Thailand	2007		genomic RNA	plasma AA092b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,110N,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447758	AA092b11L	Thailand	2007		genomic RNA	plasma AA092b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,110N,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447757	AA092b12L	Thailand	2007		genomic RNA	plasma AA092b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,110N,120G,123A,128D,148V,178T,200S,207T,208G,225S
JX447785	AA093a_LH11	Thailand	2006		genomic RNA	plasma AA093a	subtype: B	1	231	6L,14P,44A,83L,91V,110N,180D,225S,230I
JX447792	AA093a_LH15	Thailand	2006		genomic RNA	plasma AA093a	subtype: B	1	231	6L,14P,44A,83L,91V,110N,180D,225S,230I
JX447793	AA093a_LH16	Thailand	2006		genomic RNA	plasma AA093a	subtype: B	1	231	6L,14P,44A,83L,91V,110N,180D,225S,230I
JX447794	AA093a_LH18	Thailand	2006		genomic RNA	plasma AA093a	subtype: B	1	231	6L,14P,44A,83L,91V,110N,180D,225S,230I
JX447786	AA093a_LH4	Thailand	2006		genomic RNA	plasma AA093a	subtype: B	1	231	6L,14P,44A,83L,91V,110N,180D,225S,230I
JX447787	AA093a_LH5	Thailand	2006		genomic RNA	plasma AA093a	subtype: B	1	231	6L,14P,44A,83L,91V,110N,180D,225S,230I
JX447788	AA093a_LH6	Thailand	2006		genomic RNA	plasma AA093a	subtype: B	1	231	6L,14P,44A,83L,91V,110N,118I,180D,225S,230I
JX447789	AA093a_LH7	Thailand	2006		genomic RNA	plasma AA093a	subtype: B	1	231	6L,14P,44A,83L,91V,110N,180D,225S,230I
JX447790	AA093a_LH8	Thailand	2006		genomic RNA	plasma AA093a	subtype: B	1	231	6L,14P,44A,83L,91V,110N,180D,225S,230I
JX447791	AA093a_LH9	Thailand	2006		genomic RNA	plasma AA093a	subtype: B	1	231	6L,14P,44A,83L,91V,110N,180D,225S,230I
JX447801	AA094a01L	Thailand	2005		genomic RNA	plasma AA094a	subtype: CRF01_AE	1	231	6A,14S,15L,27I,31G,33N,45D,54M,58I,87Q,91N,92P,148V,178T,200S,207S,208G,225S
JX447802	AA094a02L	Thailand	2005		genomic RNA	plasma AA094a	subtype: CRF01_AE	1	231	6A,14S,15L,27I,31G,33N,45D,54M,58I,87Q,91N,92P,148V,178T,200S,207S,208G,225S
JX447803	AA094a03L	Thailand	2005		genomic RNA	plasma AA094a	subtype: CRF01_AE	1	231	6A,14S,15L,27I,31G,33N,45D,54M,58I,87Q,91N,92P,148V,178T,200S,207S,208G,225S
JX447804	AA094a04L	Thailand	2005		genomic RNA	plasma AA094a	subtype: CRF01_AE	1	231	6A,14S,15L,27I,31G,33N,45D,54M,58I,87Q,91N,92P,148V,178T,200S,207S,208G,225S
JX447805	AA094a05L	Thailand	2005		genomic RNA	plasma AA094a	subtype: CRF01_AE	1	231	6A,14S,15L,27I,31G,33N,45D,54M,58I,87Q,91N,92P,148V,178T,200S,207S,208G,225S
JX447800	AA094b01L	Thailand	2005		genomic RNA	plasma AA094b	subtype: CRF01_AE	1	231	6A,14S,15L,27I,31G,33N,45D,54M,58I,87Q,91N,92P,148V,178T,200S,207S,208G,225S
JX447813	AA094b03L	Thailand	2005		genomic RNA	plasma AA094b	subtype: CRF01_AE	1	231	6A,14S,15L,27I,31G,33N,45D,54M,58I,87Q,91N,92P,148V,178T,200S,207S,208G,225S
JX447807	AA094b04L	Thailand	2005		genomic RNA	plasma AA094b	subtype: CRF01_AE	1	231	6A,14S,15L,27I,31G,33N,45D,54M,58I,87Q,91N,92P,148V,178T,200S,207S,208G,225S
JX447806	AA094b06L	Thailand	2005		genomic RNA	plasma AA094b	subtype: CRF01_AE	1	231	6A,14S,15L,27I,31G,33N,45D,54M,58I,87Q,91N,92P,148V,178T,200S,207S,208G,225S
JX447808	AA094b07L	Thailand	2005		genomic RNA	plasma AA094b	subtype: CRF01_AE	1	231	6A,14S,15L,27I,31G,33N,45D,54M,58I,87Q,91N,92P,148V,178T,200S,207S,208G,225S
JX447812	AA094b09L	Thailand	2005		genomic RNA	plasma AA094b	subtype: CRF01_AE	1	231	6A,14S,15L,27I,31G,33N,45D,54M,58I,87Q,91N,92P,148V,178T,200S,207S,208G,225S
JX447811	AA094b10L	Thailand	2005		genomic RNA	plasma AA094b	subtype: CRF01_AE	1	231	6A,14S,15L,27I,31G,33N,45D,54M,58I,87Q,91N,92P,148V,178T,200S,207S,208G,225S
JX447810	AA094b11L	Thailand	2005		genomic RNA	plasma AA094b	subtype: CRF01_AE	1	231	6A,14S,15L,27I,31G,33N,45D,54M,58I,87Q,91N,92P,148V,178T,200S,207S,208G,225S
JX447809	AA094b12L	Thailand	2005		genomic RNA	plasma AA094b	subtype: CRF01_AE	1	231	6A,14S,15L,27I,31G,33N,45D,54M,58I,87Q,91N,92P,148V,178T,200S,207S,208G,225S
JX447827	AA095a_WG16	Thailand	2005		genomic RNA	plasma AA095a	subtype: E/B	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,194V,200S,207T,208G,225S
JX447828	AA095a_WG17	Thailand	2005		genomic RNA	plasma AA095a	subtype: E/B	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447829	AA095a_WG19	Thailand	2005		genomic RNA	plasma AA095a	subtype: E/B	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447830	AA095a_WG21	Thailand	2005		genomic RNA	plasma AA095a	subtype: E/B	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447831	AA095a_WG22	Thailand	2005		genomic RNA	plasma AA095a	subtype: E/B	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447832	AA095a_WG23	Thailand	2005		genomic RNA	plasma AA095a	subtype: E/B	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX447833	AA096a_WG1	Thailand	2007		genomic RNA	plasma AA096a	subtype: E/B	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,126I,128D,148V,178T,200S,207T,208G,225S
JX447834	AA096a_WG11	Thailand	2007		genomic RNA	plasma AA096a	subtype: E/B	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,126I,128D,148V,178T,200S,207T,208G,225S
JX447835	AA096a_WG14	Thailand	2007		genomic RNA	plasma AA096a	subtype: E/B	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,126I,128D,148V,178T,200S,207T,208G,225S
JX447836	AA096a_WG15	Thailand	2007		genomic RNA	plasma AA096a	subtype: E/B	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,126I,128D,148V,178T,200S,207T,208G,225S
JX447837	AA096a_WG16	Thailand	2007		genomic RNA	plasma AA096a	subtype: E/B	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,126I,128D,148V,178T,200S,207T,208G,225S
JX447838	AA096a_WG4	Thailand	2007		genomic RNA	plasma AA096a	subtype: E/B	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,126I,128D,148V,178T,200S,207T,208G,211LS,225S
JX447840	AA096a_WG6	Thailand	2007		genomic RNA	plasma AA096a	subtype: E/B	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,126I,128D,148V,178T,200S,207T,208G,225S
JX447841	AA096a_WG7	Thailand	2007		genomic RNA	plasma AA096a	subtype: E/B	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,126I,128D,148V,178T,200S,207T,208G,225S
JX447842	AA096a_WG8	Thailand	2007		genomic RNA	plasma AA096a	subtype: E/B	1	231	6A,14P,15L,31G,33N,54M,58I,92P,103G,120S,126I,128D,148V,178T,200S,207T,208G,225S
JX447848	AA097a01L	Thailand	2005		genomic RNA	plasma AA097a	subtype: CRF01_AE	1	231	6A,11M,14P,15L,31G,33N,54M,58I,128D,178T,200A,203R,207A,208G,216I,225S
JX447849	AA097a03L	Thailand	2005		genomic RNA	plasma AA097a	subtype: CRF01_AE	1	231	6A,11M,14P,15L,31G,33N,54M,58I,128D,178T,200A,203R,207A,208G,216I,225S
JX447850	AA097a04L	Thailand	2005		genomic RNA	plasma AA097a	subtype: CRF01_AE	1	231	6A,11M,14P,15L,31G,33N,54M,58I,128D,178T,200A,203R,207A,208G,216I,225S
JX447851	AA097a05L	Thailand	2005		genomic RNA	plasma AA097a	subtype: CRF01_AE	1	231	6A,11M,14P,15L,31G,33N,54M,58I,128D,178T,200A,203R,207A,208G,216I,225S
JX447852	AA097a06L	Thailand	2005		genomic RNA	plasma AA097a	subtype: CRF01_AE	1	231	6A,11M,14P,15L,31G,33N,54M,58I,128D,178T,200A,203R,207A,208G,216I,225S
JX447845	AA097a07L	Thailand	2005		genomic RNA	plasma AA097a	subtype: CRF01_AE	1	231	6A,11M,14P,15L,31G,33N,54M,58I,128D,178T,200A,203R,207A,208G,216I,225S
JX447844	AA097a08L	Thailand	2005		genomic RNA	plasma AA097a	subtype: CRF01_AE	1	231	6A,11M,14P,15L,31G,33N,54M,58I,128D,178T,200A,203R,207A,208G,216I,225S
JX447847	AA097a09L	Thailand	2005		genomic RNA	plasma AA097a	subtype: CRF01_AE	1	231	6A,11M,14P,15L,31G,33N,54M,58I,128D,178T,200A,203R,207A,208G,216I,225S
JX447846	AA097a10L	Thailand	2005		genomic RNA	plasma AA097a	subtype: CRF01_AE	1	231	6A,11M,14P,15L,31G,33N,54M,58I,128D,178T,200A,203R,207A,208G,216I,225S
JX447843	AA097a11L	Thailand	2005		genomic RNA	plasma AA097a	subtype: CRF01_AE	1	231	6A,11M,14P,15L,31G,33N,54M,58I,128D,178T,200A,203R,207A,208G,216I,225S
JX447867	AA098a02L	Thailand	2007		genomic RNA	plasma AA098a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,149G,200S,207T,208G,225S
JX447868	AA098a04L	Thailand	2007		genomic RNA	plasma AA098a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120G,128D,148V,149G,200S,207T,208G,225S
JX447869	AA098a06L	Thailand	2007		genomic RNA	plasma AA098a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,149G,200S,207T,208G,225S
JX447871	AA098a07L	Thailand	2007		genomic RNA	plasma AA098a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,149G,200S,207T,208G,225S
JX447870	AA098a08L	Thailand	2007		genomic RNA	plasma AA098a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,128D,148V,149G,200S,207T,208G,225S
JX447872	AA098a09L	Thailand	2007		genomic RNA	plasma AA098a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,149G,200S,207T,208G,225S
JX447873	AA098a10L	Thailand	2007		genomic RNA	plasma AA098a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,149G,200S,207T,208G,225S
JX447864	AA098a12L	Thailand	2007		genomic RNA	plasma AA098a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,149G,200S,207T,208G,225S
JX447866	AA098a13L	Thailand	2007		genomic RNA	plasma AA098a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,149G,200S,207T,208G,225S
JX447865	AA098a14L	Thailand	2007		genomic RNA	plasma AA098a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,149G,200S,207T,208G,225S
JX447884	AA099a_WG1	Thailand	2006		genomic RNA	plasma AA099a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,92P,123A,128D,178T,200S,207T,208G,225S
JX447885	AA099a_WG10	Thailand	2006		genomic RNA	plasma AA099a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,92P,123A,128D,178T,200S,207T,208G,225S
JX447886	AA099a_WG11	Thailand	2006		genomic RNA	plasma AA099a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,92P,123A,128D,178T,200S,207T,208G,214T,225S
JX447887	AA099a_WG12	Thailand	2006		genomic RNA	plasma AA099a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,92P,123A,128D,178T,200S,207T,208G,225S
JX447888	AA099a_WG3	Thailand	2006		genomic RNA	plasma AA099a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,92P,123A,128D,178T,200S,207T,208G,225S
JX447889	AA099a_WG5	Thailand	2006		genomic RNA	plasma AA099a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,92P,123A,128D,178T,200S,207T,208G,225S
JX447890	AA099a_WG8	Thailand	2006		genomic RNA	plasma AA099a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,92P,123A,128D,178T,200S,207T,208G,225S
JX447891	AA099a_WG9	Thailand	2006		genomic RNA	plasma AA099a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,92P,123A,128D,149G,178T,200S,207T,208G,225S
JX447897	AA100b01L	Thailand	2006		genomic RNA	plasma AA100b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447898	AA100b02L	Thailand	2006		genomic RNA	plasma AA100b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447899	AA100b03L	Thailand	2006		genomic RNA	plasma AA100b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447901	AA100b04L	Thailand	2006		genomic RNA	plasma AA100b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447900	AA100b05L	Thailand	2006		genomic RNA	plasma AA100b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447896	AA100b06L	Thailand	2006		genomic RNA	plasma AA100b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447895	AA100b07L	Thailand	2006		genomic RNA	plasma AA100b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447894	AA100b08L	Thailand	2006		genomic RNA	plasma AA100b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,104V,128D,148V,178T,200S,207T,208G,225S
JX447893	AA100b09L	Thailand	2006		genomic RNA	plasma AA100b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447892	AA100b10L	Thailand	2006		genomic RNA	plasma AA100b	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX447915	AA101a_LH1	Thailand	2005		genomic RNA	plasma AA101a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,87P,91F,92P,96L,98D,128D,148V,178T,200S,207T,208G,225S
JX447916	AA101a_LH15	Thailand	2005		genomic RNA	plasma AA101a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,87P,91F,92P,96L,98D,128D,148V,178T,200S,207T,208G,225S
JX447930	AA101a_LH16	Thailand	2005		genomic RNA	plasma AA101a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,86A,87P,91F,92P,96L,98D,128D,148V,178T,200S,207T,208G,225S
JX447931	AA101a_LH17	Thailand	2005		genomic RNA	plasma AA101a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,87P,91F,92P,96L,98D,128D,148V,178T,200S,207T,208G,225S
JX447932	AA101a_LH18	Thailand	2005		genomic RNA	plasma AA101a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,87P,91F,92P,96L,98D,128D,148V,178T,200S,207T,208G,225S
JX447933	AA101a_LH19	Thailand	2005		genomic RNA	plasma AA101a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,87P,91F,92P,96L,98D,128D,148V,178T,200S,207T,208G,225S
JX447917	AA101a_LH2	Thailand	2005		genomic RNA	plasma AA101a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,87P,91F,92P,96L,98D,128D,148V,178T,200S,207T,208G,225S
JX447934	AA101a_LH20	Thailand	2005		genomic RNA	plasma AA101a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,87P,91F,92P,96L,98D,128D,141T,148V,178T,200S,207T,208G,225S
JX447935	AA101a_LH21	Thailand	2005		genomic RNA	plasma AA101a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,87P,91F,92P,96L,98D,128D,148V,178T,200S,207T,208G,225S
JX447918	AA101a_LH3	Thailand	2005		genomic RNA	plasma AA101a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,87P,91F,92P,96L,98D,128D,148V,178T,200S,207T,208G,225S
JX447919	AA101a_LH4	Thailand	2005		genomic RNA	plasma AA101a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,87P,91F,92P,96L,98D,128D,148V,178T,200S,207T,208G,225S
JX447920	AA101a_LH5	Thailand	2005		genomic RNA	plasma AA101a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,87P,91F,92P,96L,98D,128D,148V,178T,200S,207T,208G,225S
JX447936	AA101a_WG1	Thailand	2005		genomic RNA	plasma AA101a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,87P,91F,92P,96L,98D,128D,148V,178T,200S,207T,208G,225S
JX447937	AA102a_LH1	Thailand	2008		genomic RNA	plasma AA102a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120G,123S,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX447938	AA102a_LH10	Thailand	2008		genomic RNA	plasma AA102a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120G,123S,128D,148V,149G,154K,178T,200S,207T,208G,219R,225S
JX447939	AA102a_LH11	Thailand	2008		genomic RNA	plasma AA102a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120G,123S,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX447940	AA102a_LH7	Thailand	2008		genomic RNA	plasma AA102a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54MT,58I,92P,120G,123S,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX447948	AA103a01L	Thailand	2005		genomic RNA	plasma AA103a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX447949	AA103a04L	Thailand	2005		genomic RNA	plasma AA103a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,50R,54M,58I,87Q,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX447950	AA103a05L	Thailand	2005		genomic RNA	plasma AA103a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX447952	AA103a07L	Thailand	2005		genomic RNA	plasma AA103a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX447951	AA103a08L	Thailand	2005		genomic RNA	plasma AA103a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX447956	AA103a10L	Thailand	2005		genomic RNA	plasma AA103a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX447957	AA103a11L	Thailand	2005		genomic RNA	plasma AA103a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX447953	AA103a12L	Thailand	2005		genomic RNA	plasma AA103a	subtype: CRF01_AE	1	231	6A,14P,15V,25KR,31G,33N,54M,58I,87Q,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX447954	AA103a13L	Thailand	2005		genomic RNA	plasma AA103a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX447955	AA103a15L	Thailand	2005		genomic RNA	plasma AA103a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX447947	AA103a16L	Thailand	2005		genomic RNA	plasma AA103a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX447968	AA104a_LH12	Thailand	2006		genomic RNA	plasma AA104a	subtype: CRF01_AE	1	231	6A,14P,31G,54M,58I,79D,92P,112P,128D,148V,178T,200S,207T,208G,225S
JX447969	AA104a_LH13	Thailand	2006		genomic RNA	plasma AA104a	subtype: CRF01_AE	1	231	6A,14P,31G,54M,58I,79D,92P,110N,128D,148V,178T,200S,207T,208G,225S
JX447970	AA104a_LH15	Thailand	2006		genomic RNA	plasma AA104a	subtype: CRF01_AE	1	231	6A,14P,31G,54M,58I,79D,92P,110N,128D,148V,178T,200S,207T,208G,225S
JX447971	AA104a_LH16	Thailand	2006		genomic RNA	plasma AA104a	subtype: CRF01_AE	1	231	6A,14P,31G,54M,58I,79D,83I,92P,110N,128D,148V,178T,200S,207T,208G,225S
JX447972	AA104a_LH17	Thailand	2006		genomic RNA	plasma AA104a	subtype: CRF01_AE	1	231	6A,14P,31G,54M,58I,79D,92P,110N,128D,148V,178T,200S,207T,208G,225S
JX447973	AA104a_LH21	Thailand	2006		genomic RNA	plasma AA104a	subtype: CRF01_AE	1	231	6A,14P,31G,54M,58I,79D,92P,110N,128D,148V,178T,200S,207T,208G,225S
JX447974	AA104a_LH22	Thailand	2006		genomic RNA	plasma AA104a	subtype: CRF01_AE	1	231	6A,14P,31G,54M,58I,79D,92P,110N,128D,148V,178T,200S,207T,208G,225S
JX447975	AA104a_LH24	Thailand	2006		genomic RNA	plasma AA104a	subtype: CRF01_AE	1	231	6A,14P,31G,54M,58I,79D,92P,108I,110N,128D,148V,178T,200S,207T,208G,225S
JX447976	AA104a_LH30	Thailand	2006		genomic RNA	plasma AA104a	subtype: CRF01_AE	1	231	6A,14P,31G,54M,58I,79D,92P,110N,128D,148V,178T,200S,207T,208G,225S
JX447977	AA104a_LH31	Thailand	2006		genomic RNA	plasma AA104a	subtype: CRF01_AE	1	231	6A,14P,31G,54M,58I,79D,92P,112P,128D,148V,178T,200S,207T,208G,225S
JX447996	AA105a02L	Thailand	2007		genomic RNA	plasma AA105a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,92P,128D,148V,149G,178T,200S,207S,208G,225S
JX447995	AA105a03L	Thailand	2007		genomic RNA	plasma AA105a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,92P,128D,148V,149G,178T,200S,207S,208G,225S
JX447994	AA105a04L	Thailand	2007		genomic RNA	plasma AA105a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,92P,128D,148V,149G,178T,200S,207S,208G,225S
JX447998	AA105a05L	Thailand	2007		genomic RNA	plasma AA105a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,92P,128D,148V,149G,178T,200S,207S,208G,225S
JX447997	AA105a06L	Thailand	2007		genomic RNA	plasma AA105a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,92P,128D,148V,149G,178T,200S,207S,208G,225S
JX447999	AA105a07L	Thailand	2007		genomic RNA	plasma AA105a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,92P,128D,148V,149G,178T,200S,207S,208G,225S
JX448000	AA105a08L	Thailand	2007		genomic RNA	plasma AA105a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,92P,128D,148V,149G,178T,200S,207S,208G,225S
JX447992	AA105a09L	Thailand	2007		genomic RNA	plasma AA105a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,92P,128D,148V,149G,178T,200S,207S,208G,225S
JX447991	AA105a10L	Thailand	2007		genomic RNA	plasma AA105a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,92P,128D,148V,149G,178T,200S,207S,208G,225S
JX447993	AA105a11L	Thailand	2007		genomic RNA	plasma AA105a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,92P,128D,148V,149G,178T,200S,207S,208G,225S
JX448012	AA106c01L	Thailand	2005		genomic RNA	plasma AA106c	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,110N,120G,123A,128D,148V,180D,200S,207T,208G,225S
JX448011	AA106c02L	Thailand	2005		genomic RNA	plasma AA106c	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,110N,120G,123A,128D,148V,180D,200S,207T,208G,225S
JX448014	AA106c04L	Thailand	2005		genomic RNA	plasma AA106c	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,110N,120G,123A,128D,148V,180D,200S,207T,208G,225S
JX448013	AA106c05L	Thailand	2005		genomic RNA	plasma AA106c	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,110N,120G,123A,128D,148V,180D,200S,207T,208G,225S
JX448015	AA106c06L	Thailand	2005		genomic RNA	plasma AA106c	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,110N,120G,123A,128D,148V,180D,200S,207T,208G,225S
JX448019	AA107a_wg1	Thailand	2005		genomic RNA	plasma AA107a	subtype: CRF01_AE	1	231	6A,11A,14P,15L,31G,33N,54M,58I,92P,128D,148V,149G,200S,207T,208G,225S
JX448020	AA107a_wg10	Thailand	2005		genomic RNA	plasma AA107a	subtype: CRF01_AE	1	231	6A,11A,14P,15L,31G,33N,54M,58I,92P,128D,148V,149G,200S,207T,208G,225S
JX448021	AA107a_wg3	Thailand	2005		genomic RNA	plasma AA107a	subtype: CRF01_AE	1	231	6A,11A,14P,15L,31G,33N,50QR,54M,58I,92P,128D,148V,149G,200S,207T,208G,225S
JX448022	AA107a_wg4	Thailand	2005		genomic RNA	plasma AA107a	subtype: CRF01_AE	1	231	6A,11A,14P,15L,31G,33N,54M,58I,92P,128D,148V,149G,200S,207T,208G,225S
JX448023	AA107a_wg5	Thailand	2005		genomic RNA	plasma AA107a	subtype: CRF01_AE	1	231	6A,11A,14P,15L,31G,33N,54M,58I,61R,92P,128D,148V,149G,200S,207T,208G,225S
JX448024	AA107a_wg6	Thailand	2005		genomic RNA	plasma AA107a	subtype: CRF01_AE	1	231	6A,11A,14P,15L,31G,33N,54M,58I,92P,128D,148V,149G,200S,207T,208G,225S
JX448025	AA107a_wg7	Thailand	2005		genomic RNA	plasma AA107a	subtype: CRF01_AE	1	231	6A,11A,14P,15L,31G,33N,54M,58I,92P,128D,148V,149G,200S,207T,208G,225S
JX448026	AA107a_wg8	Thailand	2005		genomic RNA	plasma AA107a	subtype: CRF01_AE	1	231	6A,11A,14P,15L,31G,33N,54M,58I,92P,128D,148V,149G,200S,207T,208G,225S
JX448027	AA107a_wg9	Thailand	2005		genomic RNA	plasma AA107a	subtype: CRF01_AE	1	231	6A,11A,14P,15L,31G,33N,54M,58I,92P,128D,148V,149G,200S,207T,208G,225S
JX448032	AA108a_LH5	Thailand	2008		genomic RNA	plasma AA108a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX448029	AA108a_WG2	Thailand	2008		genomic RNA	plasma AA108a	subtype: CRF01_AE	1	231	6A,14P,15L,25EK,31G,33N,54M,58I,83I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX448030	AA108a_WG3	Thailand	2008		genomic RNA	plasma AA108a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX448031	AA108a_WG4	Thailand	2008		genomic RNA	plasma AA108a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX448028	AA108a_WG6	Thailand	2008		genomic RNA	plasma AA108a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX448034	AA109a01L	Thailand	2006		genomic RNA	plasma AA109a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX448035	AA109a02L	Thailand	2006		genomic RNA	plasma AA109a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX448036	AA109a03L	Thailand	2006		genomic RNA	plasma AA109a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX448037	AA109a04L	Thailand	2006		genomic RNA	plasma AA109a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX448038	AA109a05L	Thailand	2006		genomic RNA	plasma AA109a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,124V,128D,148V,178T,200S,207T,208G,225S
JX448050	AA110a01L	Thailand	2008		genomic RNA	plasma AA110a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,48A,54M,58I,92P,120S,128D,148V,178T,200S,203R,208G,225S
JX448047	AA110b01L	Thailand	2008		genomic RNA	plasma AA110b	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,48A,54M,58I,92P,120S,128D,148V,178T,200S,203R,208G,225S
JX448049	AA110b02L	Thailand	2008		genomic RNA	plasma AA110b	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,48A,54M,58I,92P,120S,128D,148V,178T,200S,203R,208G,225S
JX448046	AA110b03L	Thailand	2008		genomic RNA	plasma AA110b	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,48A,54M,58I,92P,120S,128D,148V,178T,200S,203R,208G,225S
JX448045	AA110b04L	Thailand	2008		genomic RNA	plasma AA110b	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,48A,54M,58I,92P,120S,128D,148V,178T,200S,203R,208G,225S
JX448048	AA110b05L	Thailand	2008		genomic RNA	plasma AA110b	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,48A,54M,58I,92P,120S,128D,148V,178T,200S,203R,208G,225S
JX448057	AA111a_WG1	Thailand	2009		genomic RNA	plasma AA111a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,55I,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX448058	AA111a_WG10	Thailand	2009		genomic RNA	plasma AA111a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX448059	AA111a_WG11	Thailand	2009		genomic RNA	plasma AA111a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,67QR,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX448060	AA111a_WG2	Thailand	2009		genomic RNA	plasma AA111a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX448061	AA111a_WG3	Thailand	2009		genomic RNA	plasma AA111a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX448062	AA111a_WG4	Thailand	2009		genomic RNA	plasma AA111a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX448063	AA111a_WG5	Thailand	2009		genomic RNA	plasma AA111a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX448064	AA111a_WG6	Thailand	2009		genomic RNA	plasma AA111a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX448065	AA111a_WG7	Thailand	2009		genomic RNA	plasma AA111a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX448066	AA111a_WG8	Thailand	2009		genomic RNA	plasma AA111a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX448067	AA111a_WG9	Thailand	2009		genomic RNA	plasma AA111a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
JX448070	AA112a01L	Thailand	2008		genomic RNA	plasma AA112a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83T,92P,128D,148V,178T,200S,207T,208G,225S
JX448069	AA112a02L	Thailand	2008		genomic RNA	plasma AA112a	subtype: CRF01_AE	1	231	6A,11A,14P,15L,31G,33N,44P,54M,58I,83T,92P,128D,148V,178T,200S,207T,208G,225S
JX448068	AA112a05L	Thailand	2008		genomic RNA	plasma AA112a	subtype: CRF01_AE	1	231	6A,12N,14S,15L,31G,33N,54M,58I,83T,92P,128D,148V,178T,200S,207T,208G,225S
JX448076	AA113a_LH10	Thailand	2008		genomic RNA	plasma AA113a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,92P,128D,148V,178T,191I,200S,207T,208G,225S
JX448077	AA113a_LH11	Thailand	2008		genomic RNA	plasma AA113a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,92P,128D,148V,178T,191I,200S,207T,208G,225S
JX448078	AA113a_LH2	Thailand	2008		genomic RNA	plasma AA113a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,92P,128D,148V,178T,191I,200S,207T,208G,225S
JX448079	AA113a_LH3	Thailand	2008		genomic RNA	plasma AA113a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,92P,128D,148V,178T,191I,200S,207T,208G,225S
JX448080	AA113a_LH4	Thailand	2008		genomic RNA	plasma AA113a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,92P,128D,148V,178T,191I,200S,207T,208G,225S
JX448081	AA113a_LH5	Thailand	2008		genomic RNA	plasma AA113a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,92P,128D,148V,178T,191I,200S,207T,208G,225S
JX448082	AA113a_LH6	Thailand	2008		genomic RNA	plasma AA113a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,92P,128D,148V,178T,191I,200S,207T,208G,225S
JX448083	AA113a_LH7	Thailand	2008		genomic RNA	plasma AA113a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,92P,128D,148V,178T,191I,200S,207T,208G,225S
JX448084	AA113a_LH8	Thailand	2008		genomic RNA	plasma AA113a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,92P,128D,148V,178T,191I,200S,207T,208G,225S
JX448085	AA113a_LH9	Thailand	2008		genomic RNA	plasma AA113a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,92P,128D,148V,178T,179*Q,191I,200S,207T,208G,225S
JX448099	AA115c01L	Thailand	2008		genomic RNA	plasma AA115c	subtype: B	1	231	6L,41T,83L,86A,87Q,91V,116A,120S,124V,136M,180D,199R
JX448100	AA115c02L	Thailand	2008		genomic RNA	plasma AA115c	subtype: B	1	231	6L,41T,83L,86A,87Q,91V,116A,120S,124V,136M,180D,199R
JX448098	AA115c03L	Thailand	2008		genomic RNA	plasma AA115c	subtype: B	1	231	6L,41T,83L,86A,87Q,91V,116A,120S,124V,136M,180D,199R
JX448097	AA115c04L	Thailand	2008		genomic RNA	plasma AA115c	subtype: B	1	231	6L,41T,83L,86A,87Q,91V,116A,120S,124V,136M,180D,199R
JX448096	AA115c05L	Thailand	2008		genomic RNA	plasma AA115c	subtype: B	1	231	6L,41T,83L,86A,87Q,91V,116A,120S,124V,136M,180D,199R
JX448107	AA116a_01L	Thailand	2006		genomic RNA	plasma AA116a	subtype: CRF01_AE	1	231	6A,14P,15L,27I,31G,33N,54M,58I,61D,83L,92P,146K,148V,154K,178T,200S,208G,225S
JX448108	AA116a_03L	Thailand	2006		genomic RNA	plasma AA116a	subtype: CRF01_AE	1	231	6A,14P,15L,27I,31G,33N,54M,58I,61D,83L,92P,146K,148V,154K,178T,200S,208G,225S
JX448109	AA116a_04L	Thailand	2006		genomic RNA	plasma AA116a	subtype: CRF01_AE	1	231	6A,14P,15L,27I,31G,33N,54M,58I,61D,83L,92P,146K,148V,154K,178T,200S,208G,225S
JX448110	AA116a_05L	Thailand	2006		genomic RNA	plasma AA116a	subtype: CRF01_AE	1	231	6A,14P,15L,27I,31G,33N,54M,58I,61D,83L,92P,146K,148V,154K,176HQ,178T,200S,208G,212K,225S
JX448111	AA116a_06L	Thailand	2006		genomic RNA	plasma AA116a	subtype: CRF01_AE	1	231	6A,14P,15L,27I,31G,33N,54M,58I,61D,83L,92P,146K,148V,154K,178T,200S,208G,225S
JX448112	AA116a_07L	Thailand	2006		genomic RNA	plasma AA116a	subtype: CRF01_AE	1	231	6A,14P,15L,27I,31G,33N,54M,58I,61D,83L,92P,146K,148V,154K,178T,200S,208G,225S
JX448113	AA116a_09L	Thailand	2006		genomic RNA	plasma AA116a	subtype: CRF01_AE	1	231	6A,14P,15L,27I,31G,33N,54M,58I,61D,83L,92P,146K,148V,154K,178T,200S,208G,225S
JX448114	AA116a_10L	Thailand	2006		genomic RNA	plasma AA116a	subtype: CRF01_AE	1	231	6A,14P,15L,27I,31G,33N,54M,58I,61D,83L,92P,146K,148V,154K,178T,200S,208G,225S
JX448115	AA116a_11L	Thailand	2006		genomic RNA	plasma AA116a	subtype: CRF01_AE	1	231	6A,14P,15L,27I,31G,33N,54M,58I,61D,83L,92P,146K,148V,154K,178T,200S,208G,225S
JX448116	AA116a_12L	Thailand	2006		genomic RNA	plasma AA116a	subtype: CRF01_AE	1	231	6A,14P,15L,27I,31G,33N,54M,58I,61D,83L,92P,146K,148V,154K,178T,200S,208G,225S
JX448117	AA116a_13L	Thailand	2006		genomic RNA	plasma AA116a	subtype: CRF01_AE	1	231	6A,14P,15L,27I,31G,33N,54M,58I,61D,83L,92P,106E,146K,148V,154K,178T,200S,208G,225S
JX448129	AA117a_01L	Thailand	2006		genomic RNA	plasma AA117a	subtype: CRF01_AE	1	231	6A,9H,14P,15L,31G,33N,54M,58I,92P,120S,124V,128D,154K,183H,207T,208G,225S
JX448130	AA117a_02L	Thailand	2006		genomic RNA	plasma AA117a	subtype: CRF01_AE	1	231	6A,9H,14P,15L,31G,33N,54M,58I,92P,120S,124V,128D,154K,183H,207T,208G,225S
JX448131	AA117b01L	Thailand	2006		genomic RNA	plasma AA117b	subtype: CRF01_AE	1	231	6A,9H,14P,15L,31G,33N,54M,58I,92P,120S,124V,128D,154K,183H,207T,208G,225S
JX448133	AA117b02L	Thailand	2006		genomic RNA	plasma AA117b	subtype: CRF01_AE	1	231	6A,9H,14P,15L,31G,33N,54M,58I,92P,120S,124V,128D,154K,179QR,183H,207T,208G,225S
JX448134	AA117b03L	Thailand	2006		genomic RNA	plasma AA117b	subtype: CRF01_AE	1	231	6A,9H,14P,15L,31G,33N,54M,58I,92P,120S,124V,128D,154K,183H,207T,208G,225S
JX448132	AA117b04L	Thailand	2006		genomic RNA	plasma AA117b	subtype: CRF01_AE	1	231	6A,9H,14P,15L,31G,33N,54M,58I,92P,120S,124V,128D,154K,183H,207T,208G,225S
JX448135	AA117b05L	Thailand	2006		genomic RNA	plasma AA117b	subtype: CRF01_AE	1	231	6A,9H,14P,15L,31G,33N,54M,58I,92P,120S,124V,128D,154K,183H,207T,208G,225S
JX448137	AA117b06L	Thailand	2006		genomic RNA	plasma AA117b	subtype: CRF01_AE	1	231	6A,9H,14P,15L,31G,33N,54M,58I,92P,120S,124V,128D,154K,183H,207T,208G,225S
JX448139	AA117b07L	Thailand	2006		genomic RNA	plasma AA117b	subtype: CRF01_AE	1	231	6A,9H,14P,15L,31G,33N,54M,58I,92P,120S,124V,128D,154K,183H,207T,208G,225S
JX448140	AA117b08L	Thailand	2006		genomic RNA	plasma AA117b	subtype: CRF01_AE	1	231	6A,9H,14P,15L,31G,33N,54M,58I,92P,120S,124V,128D,154K,183H,207T,208G,225S
JX448138	AA117b09L	Thailand	2006		genomic RNA	plasma AA117b	subtype: CRF01_AE	1	231	6A,9H,14P,15L,31G,33N,54M,58I,92P,120S,124V,128D,154K,183H,207T,208G,225S
JX448136	AA117b10L	Thailand	2006		genomic RNA	plasma AA117b	subtype: CRF01_AE	1	231	6A,9H,14P,15L,31G,33N,54M,58I,92P,120S,124V,128D,154K,183H,207T,208G,225S
JX448154	AA118a_02L	Thailand	2005		genomic RNA	plasma AA118a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX448155	AA118a_04L	Thailand	2005		genomic RNA	plasma AA118a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX448156	AA118a_05L	Thailand	2005		genomic RNA	plasma AA118a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX448157	AA118a_07L	Thailand	2005		genomic RNA	plasma AA118a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX448153	AA118a_08L	Thailand	2005		genomic RNA	plasma AA118a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,213K,225S
JX448158	AA118a_09L	Thailand	2005		genomic RNA	plasma AA118a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX448159	AA118a_10L	Thailand	2005		genomic RNA	plasma AA118a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX448160	AA118a_11L	Thailand	2005		genomic RNA	plasma AA118a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX448161	AA118a_12L	Thailand	2005		genomic RNA	plasma AA118a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX448162	AA118a_13L	Thailand	2005		genomic RNA	plasma AA118a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX448173	AA119a_01L	Thailand	2006		genomic RNA	plasma AA119a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,110N,120S,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX448174	AA119a_02L	Thailand	2006		genomic RNA	plasma AA119a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,110N,120S,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX448178	AA119b01L	Thailand	2006		genomic RNA	plasma AA119b	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,110N,120S,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX448177	AA119b02L	Thailand	2006		genomic RNA	plasma AA119b	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,110N,120S,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX448176	AA119b03L	Thailand	2006		genomic RNA	plasma AA119b	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,110N,120S,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX448175	AA119b04L	Thailand	2006		genomic RNA	plasma AA119b	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,110N,120S,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX448179	AA119b06L	Thailand	2006		genomic RNA	plasma AA119b	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,110N,120S,128D,148V,149G,154K,178T,200S,207T,208G,225S
JX448194	AA121a01L	Thailand	2006		genomic RNA	plasma AA121a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,79D,83L,87Q,92P,96I,98D,116A,128D,178T,200S,207T,208G,225S
JX448193	AA121a02L	Thailand	2006		genomic RNA	plasma AA121a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,79D,83L,87Q,92P,96I,98D,116A,128D,178T,200S,207T,208G,225S
JX448191	AA121a03L	Thailand	2006		genomic RNA	plasma AA121a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,79D,83L,87Q,92P,96I,98D,116A,128D,178T,200S,207T,208G,225S
JX448197	AA121a04L	Thailand	2006		genomic RNA	plasma AA121a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,79D,83L,87Q,92P,96I,98D,116A,128D,178T,200S,207T,208G,225S
JX448192	AA121a05L	Thailand	2006		genomic RNA	plasma AA121a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,79D,83L,87Q,92P,96I,98D,116A,128D,178T,200S,207T,208G,225S
JX448195	AA121a06L	Thailand	2006		genomic RNA	plasma AA121a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,79D,83L,87Q,92P,96I,98D,116A,128D,178T,200S,207T,208G,225S
JX448190	AA121a07L	Thailand	2006		genomic RNA	plasma AA121a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,79D,83L,87Q,92P,96I,98D,116A,128D,178T,200S,207T,208G,225S
JX448196	AA121a08L	Thailand	2006		genomic RNA	plasma AA121a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,79D,83L,87Q,92P,96I,98D,116A,128D,178T,200S,207T,208G,225S
JX448189	AA121a09L	Thailand	2006		genomic RNA	plasma AA121a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,79D,83L,87Q,92P,96I,98D,116A,128D,178T,200S,207T,208G,225S
JX448188	AA121a10L	Thailand	2006		genomic RNA	plasma AA121a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,79D,83L,87Q,92P,96I,98D,116A,128D,178T,200S,207T,208G,225S
JX448187	AA121a11L	Thailand	2006		genomic RNA	plasma AA121a	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,79D,83L,87Q,92P,96I,98D,116A,128D,178T,200S,207T,208G,225S
JX448216	AA122a01L	Thailand	2005		genomic RNA	plasma AA122a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96I,116A,128D,148I,178T,200S,207T,208G
JX448210	AA122a03L	Thailand	2005		genomic RNA	plasma AA122a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96I,116A,128D,148I,178T,200S,207T,208G
JX448213	AA122a04L	Thailand	2005		genomic RNA	plasma AA122a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96I,116A,128D,148I,178T,200S,207T,208G
JX448212	AA122a05L	Thailand	2005		genomic RNA	plasma AA122a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96I,116A,128D,148I,178T,200S,207T,208G
JX448215	AA122a06L	Thailand	2005		genomic RNA	plasma AA122a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96I,116A,128D,148I,178T,200S,207T,208G
JX448214	AA122a07L	Thailand	2005		genomic RNA	plasma AA122a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96I,116A,128D,148I,178T,200S,207T,208G
JX448211	AA122a09L	Thailand	2005		genomic RNA	plasma AA122a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96I,116A,128D,148I,178T,200S,207T,208G
JX448230	AA123a01L	Thailand	2006		genomic RNA	plasma AA123a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83L,92P,110N,120S,128D,148V,173GR,183H,200A,203R,207T,208G,225S
JX448229	AA123a02L	Thailand	2006		genomic RNA	plasma AA123a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83L,92P,110N,120S,128D,148V,183H,200A,203R,207T,208G,225S
JX448228	AA123a03L	Thailand	2006		genomic RNA	plasma AA123a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83L,92P,110N,115IV,120S,128D,148DV,183H,200A,203R,207T,208G,225S
JX448233	AA123a04L	Thailand	2006		genomic RNA	plasma AA123a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83L,92P,110N,120S,128D,148V,183H,200A,203R,207T,208G,225S
JX448232	AA123a05L	Thailand	2006		genomic RNA	plasma AA123a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83L,92P,110N,120S,128D,148V,183H,200A,203R,207T,208G,225S
JX448231	AA123a06L	Thailand	2006		genomic RNA	plasma AA123a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83L,92P,110N,120S,128D,148V,183H,200A,203R,207T,208G,225S
JX448236	AA123a07L	Thailand	2006		genomic RNA	plasma AA123a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83L,92P,110N,120S,128D,148V,183H,200A,203R,207T,208G,225S
JX448237	AA123a08L	Thailand	2006		genomic RNA	plasma AA123a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83L,92P,110N,120S,128D,148V,183H,200A,203R,207T,208G,225S
JX448234	AA123a09L	Thailand	2006		genomic RNA	plasma AA123a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83L,92P,110N,120S,128D,148V,183H,200A,203R,207T,208G,225S
JX448235	AA123a10L	Thailand	2006		genomic RNA	plasma AA123a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83L,92P,110N,120S,128D,148V,183H,200A,203R,207T,208G,225S
JX448227	AA123a11L	Thailand	2006		genomic RNA	plasma AA123a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83L,92P,110N,120S,128D,148V,183H,200A,203R,207T,208G,225S
JX448226	AA123a12L	Thailand	2006		genomic RNA	plasma AA123a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83L,92P,110N,120S,128D,148V,183H,200A,203R,207T,208G,225S
JX448225	AA123a13L	Thailand	2006		genomic RNA	plasma AA123a	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83L,92P,110N,120S,128D,148V,183H,200A,203R,207T,208G,225S
JX448252	AA125a01L	Thailand	2005		genomic RNA	plasma AA125a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,79D,92P,120S,123A,148V,178T,200S,207T,208G,225S
JX448251	AA125a02L	Thailand	2005		genomic RNA	plasma AA125a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,79D,92P,120S,123A,148V,178T,200S,207T,208G,225S
JX448250	AA125a03L	Thailand	2005		genomic RNA	plasma AA125a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,79D,92P,120S,123A,148V,178T,200S,207T,208G,225S
JX448249	AA125a04L	Thailand	2005		genomic RNA	plasma AA125a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,79D,92P,120S,123A,148V,178T,200S,207T,208G,225S
JX448248	AA125a05L	Thailand	2005		genomic RNA	plasma AA125a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,79D,92P,120S,123A,148V,178T,200S,207T,208G,225S
JX448247	AA125a06L	Thailand	2005		genomic RNA	plasma AA125a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,79D,92P,120S,123A,148V,178T,200S,207T,208G,225S
JX448246	AA125a07L	Thailand	2005		genomic RNA	plasma AA125a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,79D,92P,120S,123A,148V,178T,200S,207T,208G,225S
JX448245	AA125a08L	Thailand	2005		genomic RNA	plasma AA125a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,79D,92P,120S,123A,148V,178T,200S,207T,208G,225S
JX448244	AA125a09L	Thailand	2005		genomic RNA	plasma AA125a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,79D,92P,120S,123A,148V,178T,200S,207T,208G,225S
JX448243	AA125a10L	Thailand	2005		genomic RNA	plasma AA125a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,79D,92P,120S,123A,148V,178T,200S,207T,208G,225S
JX448266	AA126a01L	Thailand	2005		genomic RNA	plasma AA126a	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,69S,92P,128D,148V,178T,200S,207T,208G,225S
JX448265	AA126a02L	Thailand	2005		genomic RNA	plasma AA126a	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,83I,92P,128D,148V,178T,200S,207T,208G,225S
JX448264	AA126a03L	Thailand	2005		genomic RNA	plasma AA126a	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX448269	AA126a04L	Thailand	2005		genomic RNA	plasma AA126a	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX448267	AA126a06L	Thailand	2005		genomic RNA	plasma AA126a	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX448268	AA126a08L	Thailand	2005		genomic RNA	plasma AA126a	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX448263	AA126a09L	Thailand	2005		genomic RNA	plasma AA126a	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,221I,225S
JX448262	AA126a10L	Thailand	2005		genomic RNA	plasma AA126a	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G
JX448278	AA127a01L	Thailand	2006		genomic RNA	plasma AA127a	subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G
JX448288	AA129a01L	Thailand	2006		genomic RNA	plasma AA129a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX448287	AA129a02L	Thailand	2006		genomic RNA	plasma AA129a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX448286	AA129a04L	Thailand	2006		genomic RNA	plasma AA129a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX448285	AA129a06L	Thailand	2006		genomic RNA	plasma AA129a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX448284	AA129a07L	Thailand	2006		genomic RNA	plasma AA129a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX448283	AA129a15L	Thailand	2006		genomic RNA	plasma AA129a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JX448296	AA130a02L	Thailand	2006		genomic RNA	plasma AA130a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,120S,123S,128D,148V,200S,207V,208G,225S
JX448297	AA130a03L	Thailand	2006		genomic RNA	plasma AA130a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,120S,123S,128D,148V,200S,207V,208G,225S
JX448298	AA130a04L	Thailand	2006		genomic RNA	plasma AA130a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,120S,123S,128D,148V,200S,207V,208G,225S
JX448299	AA130a06L	Thailand	2006		genomic RNA	plasma AA130a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,120S,123S,128D,148V,187EG,200S,207V,208G,225S
JX448300	AA130a07L	Thailand	2006		genomic RNA	plasma AA130a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83I,92P,120S,123S,128D,148V,200S,207V,208G,225S
JX448311	AA131a01L	Thailand	2008		genomic RNA	plasma AA131a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,79D,83L,92P,110N,120S,128D,154K,169F,178T,187D,191I,200S,207T,208G,225S
JX448310	AA131a02L	Thailand	2008		genomic RNA	plasma AA131a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,79D,83L,92P,110N,120S,128D,154K,169F,178T,187D,191I,200S,207T,208G,225S
JX448309	AA131a03L	Thailand	2008		genomic RNA	plasma AA131a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,79D,83L,92P,110N,120S,128D,154K,169F,178T,187D,191I,200S,207T,208G,225S
JX448308	AA131a05L	Thailand	2008		genomic RNA	plasma AA131a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,79D,83L,92P,110N,120S,128D,154K,169F,178T,187D,191I,200S,207T,208G,225S
JX448307	AA131a06L	Thailand	2008		genomic RNA	plasma AA131a	subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,79D,83L,92P,110N,120S,128D,154K,169F,178T,187D,191I,200S,207T,208G,225S