<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Brennan (2007) HIV-1 strains identified in blood donors in Brazil: Significant prevalence of B/F1 recombinants AIDS Res Hum Retroviruses. 2007 Nov;23(11):1434-41 3.84e-174 85 91 Naive Plasma Direct PCR Molecular epidemiology

Download sequences

AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
EF15044001BAB032Brazilgenomic RNA42136S,15IL,71D,92P,116Q,120S,124V,132T,148V,169F,178T,187D,207S,208G
EF15044101BAB034Brazilgenomic RNA42139A,27I,71D,92P,116Q,120S,124V,148V,154K,169F,178T,183G,187D,208G
EF15037001BAB036Brazilgenomic RNA421314P,15L,31S,44A,83L,110N,154K,194S
EF15037101BAB053Brazilgenomic RNA421314P,15L,27I,30R,41T,83M,110N,120S,135V,148I,154K,180D
EF15037201BAB054Brazilgenomic RNA42136L,71D,83L,120H,154K,180D
EF15044201BAB055Brazilgenomic RNA42136M,41T,68L,71D,83L,87Q,92P,96I,107A,116Q,120S,124V,148V,169F,170R,180D,183S,187D,204G,207T,208G
EF15037301BAB056Brazilgenomic RNA42136V,27I,83L,116A,148V,178T,207S,208G
EF15037401BAB057Brazilgenomic RNA421315L,31S,83T,110N,116A,154K,180D,210S
EF15037501BAB058Brazilgenomic RNA421327I,83L,87Q,96I,116A,148V,178T
EF15044301BAB060Brazilgenomic RNA421327I,71D,91IV,92P,116Q,120S,124V,148V,169F,178T,187D,208G
EF15037701BAB062Brazilgenomic RNA42136L,27I,83L,96I,116A,148V,178T
EF15044401BAB063Brazilgenomic RNA123115L,71D,83L,87Q,91V,116Q,120S,124V,132Q,136M,148V,154K,169F,183G,187D,208G,210S,225S
EF15037801BAB066Brazilgenomic RNA12316L,14P,15L,41T,83L,91V,154K,180D,210S
EF15037901BAB067Brazilgenomic RNA12316L,83L
EF15044501BAB068Brazilgenomic RNA12316V,11I,71D,92P,116Q,120S,124V,148V,169F,171V,178T,183G
EF15044601BAB075Brazilgenomic RNA12316L,15L,27I,71D,83L,92P,110S,116Q,120S,124V,148V,154K,169F,170R,177C,178T,183G,187D,207T,208G,225S
EF15038001BAB076Brazilgenomic RNA12316L,83L,154K,178T
EF15038101BAB080Brazilgenomic RNA12316L,14P,83L,91V,180D
EF15038201BAB084Brazilgenomic RNA12316L,14P,83L,170KR,178T,191T
EF15044701BAB085Brazilgenomic RNA12316L,27I,71D,83T,92P,116Q,120S,124V,148V,169F,177C,178T,183G,187D,208G
EF15038301BAB086Brazilgenomic RNA12316V,14P,27I,148V,180D,225S
EF15038401BAB093Brazilgenomic RNA12316L,83L,91V,154K,170R,194S
EF15038501BAB094Brazilgenomic RNA12316L,27I,31N,41A,75D,116A,132K,180D,183T,194S
EF15038601BAB095Brazilgenomic RNA12316L,83L
EF15044801BAB096Brazilgenomic RNA123144A,71D,83L,92P,116Q,120S,124V,148V,169F,178T,183G,187D,207T,208G
EF15038701BAB097Brazilgenomic RNA12316M,15L,27I,83L,87P,91V,96I,98D,110N,116R,120S,148V,178T
EF15038801BAB098Brazilgenomic RNA12316L,83L,86A,87Q,110N,120S,194S
EF15038901BAB099Brazilgenomic RNA12316L,27I,83L,91V,110N,225S
EF15039001BAB100Brazilgenomic RNA12316L,14P,71D,83L,91IV,120H,128D,154K,170R,171V,180D
EF15044901BAB101Brazilgenomic RNA12316L,14T,15L,27I,41T,71D,83L,92P,110N,116Q,120S,124V,148V,154K,169F,178T,187D,208G,210S,225S
EF15045001BAB102Brazilgenomic RNA123115L,41A,71D,83L,92P,115IV,116Q,120S,124V,132K,148V,154K,169F,178T,183G,187D,191I,207X,208G,225S
EF15039101BAB103Brazilgenomic RNA123183L,154K,194S
EF15039201BAB104Brazilgenomic RNA12316L,71D,83L,91V,115V,116A,120S,121T,180D
EF15039301BAB105Brazilgenomic RNA12316L,71D,83L,180D
EF15039401BAB106Brazilgenomic RNA12316L,14P,15L,41T,83L,87HQ,96I,110N,116A,180D
EF15039501BAB107Brazilgenomic RNA12316L,14P,83L,120H,128D,136M,154K,171V,180D
EF15039601BAB108Brazilgenomic RNA12316L,33NS,83L,154K
EF15039701CEB043Brazilgenomic RNA42136L,83L,139T,149N,160S
EF15039801CEB044Brazilgenomic RNA42136L,14P,15L,79D,83L,120H,148V,180D,191I
EF15039901CEB045Brazilgenomic RNA123114P,27I,31N,41A,96I,102Q,116A,120S,132K,148V,171V,180D,194S
EF15040001CEB047Brazilgenomic RNA12316L,14P,15M,27I,44A,83L,87Q,91V,120H,148V,180D
EF15040101CEB048Brazilgenomic RNA12316L,83L,91V,115V,120S,148V,171V,180D
EF15040201CEB049Brazilgenomic RNA12316L,14P,54I,79D,83M,91V,120S,148V,154K,171V,180D
EF15040301CEB050Brazilgenomic RNA12316L,27I,83L,148V,178T,225S
EF15040401CEB052Brazilgenomic RNA12316L,14P,15L,83L,87Q,91P,96L,116A,120H,123A,225S
EF15040501CEB069Brazilgenomic RNA12316L,41ST,83L,115V,120S,148V,180D
EF15040601CEB070Brazilgenomic RNA12316L,14P,15L,44AS,83L,120H,136M,148V,180D
EF15040701CEB071Brazilgenomic RNA12316L,27I,91V,120S,148V,171V,180D
EF15040801CEB072Brazilgenomic RNA12316L,83L,120H,148S
EF15040901CEB073Brazilgenomic RNA12316L,83L,136M,187D,208G,225A
EF15041001CEB074Brazilgenomic RNA12316L,27I,83L,91V,120NS,123PS,136M,148V,149G,194S,208G
EF15041101CEB078Brazilgenomic RNA12316L,15L,27I,41T,83L,87Q,91V,96I,110N,116A,120H,124V,148V,154K,180D
EF15045101CEB079Brazilgenomic RNA12316M,15L,71D,83L,92P,115V,116Q,120S,124V,148V,169F,187D,188S,208G
EF15041201CEB081Brazilgenomic RNA12316L,83L,96LM,115V,116A,120H,121T,180D,225S,230I
EF15041301CEB082Brazilgenomic RNA12316L,58A,71D,83L,86I,96I,112A,115V,116A,118I,123A,154K,180D,225S
EF15041401CEB083Brazilgenomic RNA12316L,27I,75D,83L,94N,120S,154K,178T,225S
EF15041501CEB087Brazilgenomic RNA12316L,27I,83L,87P,91V,96L,116A,120H,124V,148V,180D,225S,230I
EF15041601CEB088Brazilgenomic RNA12316L,14P,15M,27I,44A,83MV,87Q,91V,96L,110N,120H,148V,180D
EF15041701CEB089Brazilgenomic RNA12316L,27I,83L,148V,180D,230I
EF15045201CEB090Brazilgenomic RNA12316L,15L,71D,83L,92P,116Q,120S,124V,148V,169F,178T,183G,187D,208G,225S
EF15041801CEB091Brazilgenomic RNA12316L,27I,71D,83L,148V,180D,216S,225S
EF15045301CEB092Brazilgenomic RNA12316L,27I,33N,71D,83L,87Q,92P,96I,116Q,120S,124V,148V,154K,169F,178T,183G,187D,208G,225S
EF15041901GOB029Brazilgenomic RNA12316L,27I,83L,148V,180D,194S,225S,230I
EF15042001GOB030Brazilgenomic RNA12316L,27I,83L,87Q,91V,98D,116A,148V,178T,208G
EF15042101GOB031Brazilgenomic RNA12316L,83L,91V,208G
EF15042201GOB034Brazilgenomic RNA12316L,75D,83L,86A,87Q,91V,98D,120S,148I,180D
EF15042301GOB038Brazilgenomic RNA12316L,27I,83L,86A,87Q,91V,96I,98D,116A,120H,124V,148V,180D
EF15045401GOB039Brazilgenomic RNA12316L,44A,71D,83L,92P,116Q,120S,124V,148V,154K,169F,170R,178T,183G,187D,208G,230I
EF15042401GOB040Brazilgenomic RNA42316L,14S,15L,27I,83L,91V,148I,154K,208G
EF15043901GOB041Brazilgenomic RNA12316L,14P,15L,27I,41T,71D,83L,87Q,91V,92Q,110N,116A,120G,124V,148V,169F,178T,180D,187D,203R,208G,210S
EF15042501GOB042Brazilgenomic RNA12316L,27I,29D,83L,87Q,98D,148I,160S,225S,229K,230I
EF150426153117-4Brazilgenomic RNA822641T,91V,120S,154K,180D,208G
EF150427181615Brazilgenomic RNA42276L,14AS,15L,27I,41T,83M,86P,87Q,91L,110N,154K,194S,208G,225S
EF150455182189Brazilgenomic RNA62316L,14P,15L,27I,41T,71D,83L,92P,116Q,120S,124V,148V,169F,171C,178T,183G,187D,207S,208G,225S
EF15045637811Brazilgenomic RNA42316L,14S,15L,27I,71D,83L,92P,116Q,120S,124V,148V,169F,178T,183G,187D,210S,230I
EF15042838154Brazilgenomic RNA722815L,27I,83L,91V,98DE,110N,116A,154K,180D,205M,208G,225S
EF15043839212Brazilgenomic RNA12316L,83L,180D,225S
EF15042939462Brazilgenomic RNA823083L,86AP,87Q,96I,110N,116AT,180D,225S,230I
EF150431437895Brazilgenomic RNA62306M,14P,16A,27I,83M,86P,87Q,91V,120S,136LM,146R,148S,154K,178T
EF150432439200Brazilgenomic RNA422814P,44A,83M,86P,87Q,96I,120S,154K,178T,194S
EF150433440163Brazilgenomic RNA62306L,71D,83L,91V,180D,191IV,208G
EF150434443592Brazilgenomic RNA1122871D,91V,120H,154K,180D
EF150435465249Brazilgenomic RNA62296L,16T,41T,71D,83L,116A,118I,120G,152E,154K,180D,225S
EF150436465302Brazilgenomic RNA42286L,148V,178T,216S
EF150437O13650060Brazilgenomic RNA52276L,14AT,15L,83L,96I,116A,120H,148V,154K,170R,180D,225S

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