<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Cho (2019) High frequency of gross deletions in the 5' LTR and gag regions in HIV type 1-infected long-term survivors treated with Korean red ginseng AIDS Res. Hum. Retroviruses 24 (2), 181-193 (2008) 6.28e-169 43 18 Naive PBMC Direct PCR Miscellaneous

Download sequences

AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
EU04760501CSR7-3091USAgenomic DNAsubtype: B123110I,18K,28K,29K,46R,51N,67P,83L,89R,127R,128*,130S,136M,142L,173K,178T
EU04760601CSR7-3092USAgenomic DNAsubtype: B123114P,83L,136M,141L,202V
EU04769301HSJ-3145/3496South Koreagenomic DNAsubtype: B123183L,91V,136M
EF37029301HSJ12-2447South Koreagenomic DNA123183L,136M
EF37022001KJin11-2734South Koreagenomic DNA12316L,15M,41A,83L,87Q,91V,120S,132K,136M,138F,160S,208G
EF37032401LHS2-2681South Koreagenomic DNA1623127I,41T,83L,86P,87Q,91L,154K
EU04763701OSG2-3316South Koreagenomic DNAKorean subclade B12316L,14P,27I,75D,83L,120H,128D
EF37032201PSJ10-2356South Koreagenomic DNA12316L,83L,136M
EF37037802JDH8-2379South Koreagenomic DNA12316L,14P,15L,83L,105S,142L,173T,181E
EF37030302LJI8-2257South Koreagenomic DNA12316L,14P,41T,83L,87Q,91V,107S,120S,124V,146C,154K,184*,216S,225S
EF37036502PGU10-2277South Koreagenomic DNA12316L,83L,86M,91L
EU04760703CSR3-3089USAgenomic DNAsubtype: B123128K,83L,106R,112H,136M
EU04760803CSR3-3090USAgenomic DNAsubtype: B123183L,191I
EF37031603KGS1-2412South Koreagenomic DNA12316L,27I,41T,83L,87Q,94C,96I,106*,109I,116Q,148V,208G
EF37037303LGS2-2265South Koreagenomic DNA12316L,27I,83L,105T,148V,219H
EF37023804JWK7-2380South Koreagenomic DNA12316L,14P,27I,79D,83L,148A,208G,225S
EF37022904KJin8-2388South Koreagenomic DNA823115M,41A,83L,87Q,91V,120S,132K,136M,138F,160S,208G
EF37019404KJS8-2386South Koreagenomic DNA62316Y,7K,14P,15L,83L,87Q,91P,96L,116A,120H,208G,225S,231W
EF37032604KKT7-2354South Koreagenomic DNA12316L,14P,83L,87Q,96I,116A,123A
EF37037504LJH7-2369South Koreagenomic DNA12316L,15L,27I,71D,83L,86P,91V,120S,148V,149G,230I
EF37033804LSg10-2365South Koreagenomic DNA12316L,27I,83L,116A,118I,148V
EF37020404LSK8-1640South Koreagenomic DNA62316L,27I,41T,75D,83L,86P,87Q,96I,116R,120S,128D,132G,183T,208G,225S
EF37035704YGS8-2624South Koreagenomic DNA3123183L,87Q,148I
EF37035804YGS8-2625South Koreagenomic DNA3023183L,87Q,208G
EF37038605CYS1-2359South Koreagenomic DNA12316L,14P,27I,41T,83L,86A,87Q,91V,96I,98D,116A,120H,124V,208G,210N
EF37029905JOE1-2262South Koreagenomic DNA12316L,27I,59I,71K,120H,148V,154K,170R,178T,225S
EF37024005JWK7-2682South Koreagenomic DNA2023127I,79D,83L,148A,208G,225S
EF37038305KBHn5-2924LSouth Koreagenomic DNA12316L,27I,83L,87Q,96I,116T,208G
EF37032705KJM2-2358South Koreagenomic DNA12316L,27I,83L,86A,87Q,91V,96I,98D,116A,120H,124V,208G,210N
EF37028005KMH9-2683South Koreagenomic DNA1623183L,116A,208G,225S
EF37035405LHO6-2254South Koreagenomic DNA12316L,15M,16T,27I,83L,86P,87Q,91F,92P,96I,98D,116T,120S,136M,148V,154K,178T,225A
EF37036105YGS8-2622South Koreagenomic DNA12316L,27I,45Q,83L,184Y
EF37036005YGS8-2623South Koreagenomic DNA12316L,10I,27I,83L,86A,87Q,120S,148I
EF37029005YJN2-2432South Koreagenomic DNA12316L,15L,83M,107S,120S,154K,183T,225S
EF37023106KJin1-2679South Koreagenomic DNA2923129L,30R,31P,41A,83L,87Q,91V,120S,132K,136M,138F,160S,208G
EF37023206KJin1-2680South Koreagenomic DNA2023141A,83L,87Q,91V,120S,132K,136M,138F,160S,208G
EU04766906KYR11-3216South Koreagenomic DNAKorean subclade B12316L,83L
EF37021706LSH2-2684South Koreagenomic DNA1523115L,27I,41T,83L,87Q,91V,120S,123A,136M,143K,146C,148I,208G,225S
EU04770007HSJ1-3114/3495South Koreagenomic DNAsubtype: B12316M,83L,91V,136M
EU04761795HSH11-3298South Koreagenomic DNAKorean subclade B12316L,27I,83L,116A,118I,148V,171I,200I,216P
EU04761695HSH2-3331South Koreagenomic DNAKorean subclade B12316L,27I,83L,116A,118I,148V
EF37026696KYR9-2272South Koreagenomic DNA12316L,14P,83L
EU04765699KGS8-3306South Koreagenomic DNAKorean subclade B12316L,27I,67H,83L,148V,208G

Database

Resources

Team