Genbank References: capsid (p24)

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Genbank References: capsid (p24)

Authors	Title	Citation	E-value	# in Gb	#Pts	ART	Source	Cloning	StudyType
Kinloch (2018)	Direct Submission	Submitted (20-SEP-2018) Faculty of Health Sciences	2.57e-168	337	337	Naive	Plasma	Direct PCR	HLA

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Accession	IsolateName	Country	MolType	Note	FirstAA	LastAA	MutList
MH971615	AMU001	Uganda	genomic RNA	subtype: D	1	231	6L,14AS,15V,41T,50S,54S,59I,71D,83LV,91V,120S,128D,148V,180D,208G,225S
MH971749	AMU003	Uganda	genomic RNA	subtype: A1	1	231	2V,6A,9H,11I,14S,15L,26A,27I,30R,31G,50G,54M,58I,71D,83L,87Q,92P,111P,120S,128D,148V,153IV,154K,169F,171IV,180D,187D,191IV,200S,207S,208G,210S,225S
MH971750	AMU007	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,12Y,14S,15M,27I,54M,58I,83L,87Q,91IV,92P,96L,111P,115V,120S,128D,148V,169F,171A,178T,180D,183G,203R,207A,208G,210S,225S
MH971751	AMU012	Uganda	genomic RNA	subtype: A1	1	231	6A,14S,15L,27I,30R,31G,54C,58I,71D,79D,83L,92P,96LM,111P,120G,128D,148V,154KR,169F,171V,180D,183AS,187D,190M,191I,200S,208G,225S
MH971752	AMU014	Uganda	genomic RNA	subtype: A1	1	231	6A,10Y,14P,15L,26A,27I,30R,31G,54M,58I,71D,83L,92P,111P,128D,148V,153V,154K,163E,169F,171I,178T,183G,191IV,200S,203R,207S,208G,225S
MH971753	AMU015	Uganda	genomic RNA	subtype: A1	1	231	3I,6A,11I,15L,27I,30R,31G,48I,54M,58I,71D,83L,92P,111P,128D,148V,154K,169F,178T,183G,200S,203R,208G
MH971754	AMU019	Uganda	genomic RNA	subtype: A1	1	231	6A,11IV,14P,15L,27I,54M,58V,71D,83L,92P,107AT,111P,120G,128D,148V,154K,169F,178T,183G,191I,200S,207T,208G,210S,225AS
MH971755	AMU020	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14S,15L,27I,31G,48I,54M,58I,79DE,83AV,91V,111P,116A,118MT,120G,128D,148V,169F,171A,179A,180D,200S,203R,207AV,208G,225S
MH971756	AMU022	Uganda	genomic RNA	subtype: A1	1	231	6A,10P,11I,15V,27I,54M,58I,71D,83L,87HQ,91AITV,92P,120S,128D,148V,154K,169F,188S,207T,208G,225ST
MH971757	AMU026	Uganda	genomic RNA	subtype: A1	1	231	6A,11M,15L,27I,30R,31G,54M,58I,71D,83L,86P,87Q,92P,96L,111P,116AGRT,128D,148V,153V,154K,169F,171I,178T,183G,200S,207S,208G
MH971758	AMU030	Uganda	genomic RNA	subtype: A1	1	231	3L,6A,11I,14P,15F,27I,30R,31G,54M,58I,71D,83L,87Q,111P,112H,115V,120G,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G,210S,225S
MH971759	AMU034	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,15V,27I,54M,58I,71D,83L,87Q,92P,96L,111P,120G,128D,148V,154K,169F,171A,178T,180D,200S,203R,207A,208G
MH971616	AMU035	Uganda	genomic RNA	subtype: D	1	231	6L,14S,27I,54IT,79D,83LQ,91IV,120S,148V,171AITV,180D,183T,208G,225S
MH971760	AMU040	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14S,15L,27I,47ACGS,54M,58I,71D,83L,91V,111P,116A,120G,128D,148V,154K,169F,171C,178T,183G,200S,203R,207T,208G,225S
MH971761	AMU046	Uganda	genomic RNA	subtype: A1	1	231	3MV,6A,11I,15L,27I,30R,31G,48I,54M,58I,71D,83L,92P,111P,128D,148V,154K,169F,176QR,178T,183G,200S,203R,208G,210S
MH971617	AMU050	Uganda	genomic RNA	subtype: D	1	231	6V,14P,16T,27I,31N,41T,83L,105AV,107AT,116AD,118I,120G,128DE,148V,180D,203R,208G,210S,225S
MH971762	AMU051	Uganda	genomic RNA	subtype: A1	1	231	6A,11IV,14S,15F,27I,30R,31G,54M,58I,71D,78IV,83L,87PQ,92AP,96L,98D,111P,120G,128D,148V,154K,169F,170Q,178ST,180D,187DE,190I,200S,207T,208G,210ST,225S
MH971763	AMU052	Uganda	genomic RNA	subtype: A1	1	231	2IV,6A,11IT,13HQ,14P,15F,27I,30KR,31G,54M,58I,71D,72A,83L,92P,111V,115V,120S,128D,148V,154K,169F,178T,180D,200S,203R,207S,208G
MH971618	AMU061	Uganda	genomic RNA	subtype: D	1	231	6L,27I,41T,83T,87HQ,91V,148V,180D,208G,225S
MH971764	AMU063	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,15L,27I,30R,31G,54M,58I,71D,83L,92P,111P,128D,148V,154K,169F,178T,180DE,187D,200S,203R,208G
MH971619	AMU064	Uganda	genomic RNA	subtype: D	1	231	6L,14P,27I,41ST,71D,83L,91A,112A,120S,128D,148V,154K,177G,180D,208G,210N
MH971620	AMU067	Uganda	genomic RNA	subtype: D	1	231	2V,6L,11AS,12Y,14N,15L,27I,41T,50S,83L,86AV,87Q,91V,100KR,120S,124V,148V,180D,191IV,203KR,208EQ,210S,225S
MH971621	AMU068	Uganda	genomic RNA	subtype: D	1	231	6L,15L,27I,83L,91V,110S,148V,180D,208G,225S
MH971622	AMU069	Uganda	genomic RNA	subtype: D	1	231	6L,14AT,15L,16ST,27I,41T,71D,83L,86IMV,91A,120S,148V,154K,180D,194S,208G,225S
MH971765	AMU070	Uganda	genomic RNA	subtype: A1	1	231	6A,10F,11S,14S,15L,27I,54M,58I,71D,83L,86A,87Q,96I,111P,116A,120G,128D,148V,154K,169F,178T,183G,187DE,191I,200S,203R,208G,210S,212*E,225RS
MH971766	AMU073	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,15L,27I,30R,31G,48I,54M,58I,71D,79D,83L,87Q,92P,111P,120S,148V,154K,169F,178T,183G,200AS,203R,207S,208G
MH971767	AMU075	Uganda	genomic RNA	subtype: A1	1	231	6A,11M,15L,26A,27I,30R,31G,54M,58I,71D,79D,83L,87Q,91IMV,111P,120S,148V,154K,169F,171A,180D,183GS,187A,200S,203R,207Q,208G,225GS
MH971623	AMU077	Uganda	genomic RNA	subtype: D	1	231	6L,14N,15L,27I,50S,83L,87Q,91P,96V,116A,120G,123A,148V,154K,180D,225A
MH971768	AMU079	Uganda	genomic RNA	subtype: A1	1	231	3I,6A,11I,13N,14P,15L,27I,30R,31G,33N,48I,54M,58I,71D,83L,92P,111P,116A,120G,123A,128D,148V,153V,154K,169F,171I,178T,183G,191I,203R,204S,208G,210S
MH971769	AMU080	Uganda	genomic RNA	subtype: A1	1	231	6A,11M,15L,27I,30R,31G,50G,54M,58I,71D,79D,83L,87Q,111T,120S,148V,154K,169F,178T,183G,200S,207S,208G,225S
MH971624	AMU081	Uganda	genomic RNA	subtype: D	1	231	6L,15IL,27I,83L,87HQ,91V,110S,120S,148V,180D,225S
MH971770	AMU082	Uganda	genomic RNA	subtype: A1	1	231	6A,15V,27I,54M,58I,71D,83L,87Q,91F,92P,120G,128D,131R,148V,153V,154K,169F,171I,178T,183G,191I,200S,203R,207T,208G
MH971771	AMU085	Uganda	genomic RNA	subtype: A1	1	231	6A,14N,15L,27I,54M,58I,65AP,71D,83L,91IV,111P,116A,120S,128D,148V,154K,169F,178T,183G,191I,200S,203R,208G,210S
MH971625	AMU095	Uganda	genomic RNA	subtype: D	1	231	6L,27I,33N,36I,41T,83L,86I,100T,120S,128D,148V,154K,180D,194S,208G,225S
MH971626	MBA1001	Uganda	genomic RNA	subtype: D	1	231	6L,27I,36I,75D,79D,83L,116A,120S,148V,177C,178T,180DE,191L,200NT,208G,225S
MH971627	MBA1006	Uganda	genomic RNA	subtype: D	1	231	6L,27I,35EQ,41T,83L,91V,112A,115V,116A,120S,124V,148V,180D,208G
MH971772	MBA1007	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14H,15L,27I,31G,33N,54M,58I,71D,83L,91V,96I,111P,116T,120S,128D,148V,154K,169F,178T,183G,200S,203R,207T,208G
MH971773	MBA1008	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,15L,30R,31G,54M,58I,59I,71D,83L,92P,110NT,111T,120G,128D,148V,154K,169F,178T,183G,200S,203R,208G,210S,225S
MH971774	MBA1009	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14S,15L,27I,30R,54M,58I,71D,83L,91V,111P,116A,120G,128D,148V,154K,169F,171A,178T,180D,183G,204S,207A,208G
MH971775	MBA1011	Uganda	genomic RNA	subtype: A1	1	231	6A,14NT,15L,27I,31G,58I,71D,83L,87Q,92P,96L,111P,115V,148V,154K,169F,171IT,177G,187D,200A,203R,207Q,208G,225A
MH971776	MBA1012	Uganda	genomic RNA	subtype: A1	1	231	6A,15L,27I,30R,31G,48A,54M,58I,59I,71D,83L,91IL,92P,111T,120G,128D,148V,154K,169F,178T,183G,200S,203R,208G,210S,225S
MH971628	MBA1015	Uganda	genomic RNA	subtype: D	1	231	6L,14N,27I,83L,91V,116DGNS,120S,148V,180D,225S
MH971777	MBA1017	Uganda	genomic RNA	subtype: A1	1	231	6A,11IV,15V,27I,54M,58I,71D,83L,111P,116A,128D,148V,154K,169F,178T,183G,200S,203KR,207A,208G
MH971778	MBA1020	Uganda	genomic RNA	subtype: A1	1	231	6V,15V,26A,27I,36I,54M,58I,71D,79D,83L,91V,111P,116A,120GS,128D,148V,154K,169F,171V,178T,183G,191I,203R,207S,208G,210ST
MH971779	MBA1021	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14S,15L,27I,54M,58I,71D,83L,87HQ,92P,111P,116GR,120S,128D,148V,154K,165M,169F,178T,183NS,204S,208G
MH971780	MBA1024	Uganda	genomic RNA	subtype: A1	1	231	5S,6A,11I,14P,15L,27I,29D,31G,33N,54M,58V,71D,83I,111T,116A,120G,128D,148V,154K,169F,178T,183G,200S,207T,208G,225S
MH971781	MBA1027	Uganda	genomic RNA	subtype: A1	1	231	6A,11AV,14P,15L,26A,27I,30R,31G,54M,58I,71D,83L,87Q,92P,110N,111V,120S,128D,148V,154K,163DE,169F,178T,183G,187Q,200AT,203R,208G,225S
MH971629	MBA1033	Uganda	genomic RNA	subtype: D	1	231	6L,27I,71D,83L,91V,98D,110S,120S,148V,180D,225S
MH971782	MBA1034	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14S,15L,27I,50G,54M,58I,71D,83L,87HQ,91AV,111P,116A,120A,131R,148V,154K,169F,178T,183G,184*W,200S,203R,207A,208G
MH971783	MBA1035	Uganda	genomic RNA	subtype: A1	1	231	6A,9HQ,14S,15LP,27I,31G,48AT,52IL,54MT,58I,59IMV,71D,83L,86IV,91N,92PQ,96LM,111ILPT,120S,128D,148V,154K,169F,178T,183G,191IV,200S,203R,207A,208G
MH971784	MBA1037	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14T,15L,27I,47ACGS,54M,58I,75D,83L,92P,97K,111I,120S,128D,131R,148V,154K,169F,171C,180D,183DGNS,187DE,190M,191I,200S,203R,207T,208G,225GS
MH971630	MBA1039	Uganda	genomic RNA	subtype: D	1	231	6L,11I,15IL,26IV,27I,54G,58A,75DE,83L,91NT,120S,148V,154K,160T,187D,208G,225S
MH971631	MBA1040	Uganda	genomic RNA	subtype: D	1	231	2L,5KN,6ILMR,7KQ,8GLVW,9LQ,16LS,18IR,21NS,23CRSW,25KT,27I,29EK,41T,83L,91V,148V,180D,208G
MH971785	MBA1041	Uganda	genomic RNA	subtype: A1	1	231	6A,15V,27I,58I,71D,83L,86A,87Q,91F,92P,93A,96L,111I,120S,148V,154K,169F,171A,178T,183G,191A,200S,203R,208G,225S
MH971632	MBA1042	Uganda	genomic RNA	subtype: D	1	231	6L,27I,50G,83L,91V,120S,148V,162K,208AG,225S,230I
MH971633	MBA1044	Uganda	genomic RNA	subtype: D	1	231	6L,27I,58A,71D,83L,87P,96I,98D,110N,116T,118I,120G,148V,180D,187D,191IV,205LM,208G,210S
MH971634	MBA1045	Uganda	genomic RNA	subtype: D	1	231	6L,15L,27I,41T,71D,77AT,83L,91V,98DE,110S,120S,128DE,148V,154KR,169F,178T,180D,203R,208G,225S
MH971635	MBA1046	Uganda	genomic RNA	subtype: D	1	231	6L,14P,27I,83L,91V,110N,116A,120G,123A,148V,180D
MH971786	MBA1047	Uganda	genomic RNA	subtype: A1	1	231	6A,11IV,12Y,14T,15L,27I,54M,58I,71D,83L,91V,111P,115L,116A,118I,120G,128D,148V,154K,162K,169F,171A,178T,183G,200S,203R,207T,208G,216I,225S
MH971787	MBA1048	Uganda	genomic RNA	subtype: A1	1	231	6A,11A,15V,31G,54M,58I,71D,83I,87Q,111I,116AG,120S,128D,148V,180D,184*W,187Q,200A,203R,208G
MH971636	MBA1050	Uganda	genomic RNA	subtype: D	1	231	6L,27I,83LV,87HQ,91N,92P,116A,120S,148V,180D,225S
MH971637	MBA1051	Uganda	genomic RNA	subtype: D	1	231	6L,27I,83L,116N,120S,148V,180D,225S
MH971788	MBA1052	Uganda	genomic RNA	subtype: A1	1	231	6A,14T,15L,27I,31G,54M,58I,71D,83I,91V,111P,116A,120G,123A,128D,148V,154K,169F,178T,180D,200S,207S,208G,225GS
MH971789	MBA1053	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,15V,27I,31AG,54M,58I,71D,83L,86A,87Q,96I,111PT,115IV,116A,120G,128D,148V,154K,169F,178T,183HN,200S,207T,208G,210S,225S
MH971638	MBA1054	Uganda	genomic RNA	subtype: D	1	231	6L,27I,41T,83L,91V,115V,116A,120S,124V,148V,180D,208G,225S
MH971639	MBA1055	Uganda	genomic RNA	subtype: D	1	231	6L,14P,27I,44A,50S,54L,79D,83L,86AV,87Q,91L,96IM,112A,116AG,120S,148V,171C,180D,199R,225S
MH971640	MBA1057	Uganda	genomic RNA	subtype: D	1	231	6L,15L,27I,41T,78S,83M,91IV,96V,105V,107A,116A,120S,124V,148V,154K,180D,225S
MH971790	MBA1058	Uganda	genomic RNA	subtype: A1	1	231	2IL,6A,15V,27I,30R,47C,58I,71D,83L,92P,120S,128DG,148V,154K,169F,171A,178T,180D,183G,200S,203R,208G,210S
MH971791	MBA1060	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14S,15L,27I,31G,48I,50LQ,54M,58I,71D,83L,87Q,92P,96L,111LP,120GS,128D,148V,154K,169F,178T,180D,187D,200S,203R,207A,208G
MH971641	MBA1062	Uganda	genomic RNA	subtype: D	1	231	6L,27I,41T,78G,83L,120S,148V,154K,178T,183S,190LS
MH971642	MBA1065	Uganda	genomic RNA	subtype: D	1	231	6L,14P,15IL,16T,27I,29D,41T,83L,91V,110N,120S,148V,180D,208SW,210ST
MH971792	MBA1066	Uganda	genomic RNA	subtype: A1	1	231	6A,11M,14S,15L,26A,27I,30R,31G,36IV,50G,54M,58I,71D,83L,87Q,91V,92P,111P,116A,120S,124V,128D,148V,154K,169F,180D,183NS,187D,200S,203R,208G,225S
MH971643	MBA1067	Uganda	genomic RNA	subtype: D	1	231	6L,27I,33N,51DE,83L,87Q,91H,92P,93A,96L,120S,148V,180D,225S,230I
MH971644	MBA1068	Uganda	genomic RNA	subtype: D	1	231	6L,27I,41T,83L,87Q,91IV,120S,148V,180D,203R,208G
MH971645	MBA1070	Uganda	genomic RNA	subtype: D	1	231	6L,15L,27I,29DE,41T,83L,91V,116A,120S,148V,154K,180D,208AG,225S
MH971793	MBA1073	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,15L,27I,30R,31G,50T,54M,58I,71D,83L,87Q,92P,96LM,111P,128D,148V,154K,169F,178ST,180D,183DGNS,187D,200S,203R,207PS,208G
MH971794	MBA1077	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14T,15V,27I,31G,50T,58I,62HP,71D,83L,92P,111I,113D,120S,128DE,148V,154K,169F,180D,183G,200S,203R,207S,208G
MH971795	MBA1078	Uganda	genomic RNA	subtype: A1	1	231	6A,9V,14G,15L,16A,27I,31G,33NS,47T,50H,54M,58V,71D,83L,92P,110N,111V,120G,123A,128D,131R,148V,152E,169F,180D,203R,207A,208G,210S
MH971646	MBA1079	Uganda	genomic RNA	subtype: D	1	231	6L,15M,27I,33N,44AS,54IL,83I,91V,120S,148V,154K,180D,194S,208G
MH971796	MBA1080	Uganda	genomic RNA	subtype: A1	1	231	6A,14S,15L,27I,29DE,50G,54M,58I,71D,83L,91IV,111P,116A,120G,128D,131R,148V,154K,169F,178T,183G,191I,200G,203R,207AS,208G,210ST
MH971797	MBA1081	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,15L,27I,30R,31G,54M,58I,59IV,71D,91A,92P,111I,115V,116AG,120G,123A,128D,148V,154K,169F,177C,178T,187Q,188S,200S,203R,208G,225S
MH971798	MBA1082	Uganda	genomic RNA	subtype: A1	1	231	3M,6A,11I,12HY,15L,16T,26A,27I,30R,31G,54M,58V,71D,83L,87HQ,92P,111P,115V,120G,123A,128D,148V,154K,169F,178T,180DE,200S,203R,207A,208G
MH971799	MBA1083	Uganda	genomic RNA	subtype: A1	1	231	6A,11T,15L,27I,47AT,54M,58V,75D,83L,92P,96IM,111V,120G,123AP,131R,148V,154KR,169F,177AT,178T,180D,203R,207A,208G,211I
MH971800	MBA1084	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14S,15L,27I,31G,54M,58I,71D,83L,91V,92P,111P,116AG,120G,128D,148V,154K,169F,178T,180DE,183NT,200S,207S,208G
MH971801	MBA1085	Uganda	genomic RNA	subtype: A1	1	231	11I,14P,15L,20M,26A,27I,30R,31G,54M,58I,71D,83L,86A,87Q,92P,96I,111P,116R,128D,148V,154K,169F,171A,178T,194S,200S,203R,207A,208G,225S
MH971802	MBA1087	Uganda	genomic RNA	subtype: A1	1	231	6A,11IV,15V,26AV,27I,41T,54M,58I,71D,83L,87Q,92P,96I,116T,120G,128D,148V,154K,169F,171IT,178ST,183DGNS,187D,203KR,208G,225S
MH971803	MBA1088	Uganda	genomic RNA	subtype: A1	1	231	6A,14V,15V,27I,31G,58I,71D,83L,92P,111I,120S,124IV,128D,148V,154K,169F,178T,200S,203R,208G,225S
MH971647	MBA1089	Uganda	genomic RNA	subtype: D	1	231	6L,27I,41T,83L,116A,124V,148V,180D,199R,225S
MH971804	MBA1090	Uganda	genomic RNA	subtype: A1	1	231	6A,14T,15L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,163DE,169F,178T,180D,200S,203R,207AT,208G,225GS
MH971648	MBA1092	Uganda	genomic RNA	subtype: D	1	231	6L,14AP,15L,27I,29DE,41T,83L,91IV,96IM,110N,115IV,116AT,120S,148V,180D,208G,210S,225GS
MH971805	MBA1096	Uganda	genomic RNA	subtype: A1	1	231	6A,14S,15L,27I,51DE,58I,65PT,67QR,71D,77AD,80GW,83L,87Q,92PS,96L,111P,120G,128D,148V,154K,169F,178T,183AG,187D,191I,199EK,200ST,203R,208G,209AG,215IM,221LV,225AG
MH971806	MBA1097	Uganda	genomic RNA	subtype: A1	1	231	6A,9H,14P,15L,27I,31G,33N,54M,58I,71D,83L,87Q,91F,92P,111I,128D,148V,154K,169F,178T,187D,200S,203R,208G
MH971807	MBA1098	Uganda	genomic RNA	subtype: A1	1	231	6A,14S,15V,26AV,27I,29DE,36IV,44A,45D,54V,58I,71D,83L,92P,111I,120S,128D,148V,154K,169F,178T,183DGHR,186AT,200S,203R,208G
MH971808	MBA1099	Uganda	genomic RNA	subtype: A1	1	231	6T,12Y,14S,15V,27I,41T,54M,58I,71D,83L,87Q,92P,111P,120S,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G,225S
MH971809	MBA1100	Uganda	genomic RNA	subtype: A1	1	231	6A,11IV,14G,15V,27I,30R,31G,54M,58I,71D,83LV,92P,107A,111V,120S,128D,129L,148V,153IV,154K,169F,178T,183S,191I,200S,207S,208G,225S
MH971649	MBA1101	Uganda	genomic RNA	subtype: D	1	231	6L,27I,54I,79D,83L,87Q,91V,120S,148V,171V,180D,208G,225S
MH971810	MBA1102	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,15V,27I,54M,58I,71D,83L,87Q,92P,111P,120S,128D,148V,154K,169F,178T,183G,187D,203R,208G,225S
MH971811	MBA1103	Uganda	genomic RNA	subtype: A1	1	231	6V,15L,27I,33NS,48I,54M,58V,71D,83L,107S,111P,116A,120G,128D,131R,132K,136M,138F,148V,154K,169F,171A,178T,180D,200S,207A,208G,225S
MH971650	MBA1105	Uganda	genomic RNA	subtype: D	1	231	6L,27I,33N,71D,83L,91V,100T,120S,128D,148V,180D,199R,208Q
MH971651	MBA1107	Uganda	genomic RNA	subtype: D	1	231	6L,14N,15L,27I,41T,83L,116A,120S,148V,180D,225S
MH971812	MBA1108	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,15LV,27I,54M,58I,71D,83L,92P,111P,120GS,128D,148V,154K,169F,178T,180D,187D,203R,208G
MH971813	MBA1110	Uganda	genomic RNA	subtype: A1	1	231	6A,10A,12Y,15V,27I,30R,54M,58I,71D,83L,87Q,92P,96L,111P,120G,128D,148V,154K,169F,171A,178T,180D,183G,200S,207T,208G
MH971652	MBA1112	Uganda	genomic RNA	subtype: D	1	231	6L,27I,41T,86M,87Q,91L,96I,98DE,116T,120S,148V,179A,180D,183T,187D,208G,225S
MH971653	MBA1113	Uganda	genomic RNA	subtype: D	1	231	6L,14S,15L,27I,71D,83L,91V,148V,154K,170R,180D,225S
MH971654	MBA1115	Uganda	genomic RNA	subtype: D	1	231	6L,27I,78G,83L,116A,120S,148V,180D,183T,225GS
MH971814	MBA1116	Uganda	genomic RNA	subtype: A1	1	231	6A,14P,27I,44A,54V,58I,83L,92P,111P,120S,128D,148V,154K,169F,171I,183G,187G,203R,208G,210ST,211I
MH971655	MBA1118	Uganda	genomic RNA	subtype: D	1	231	6L,27I,41T,83T,86I,87P,91L,96L,98D,116T,124M,148V,180D,208G
MH971656	MBA1119	Uganda	genomic RNA	subtype: D	1	231	6L,14PS,15IL,16ST,27I,36IV,41T,71DE,83AT,91Q,110S,116A,120S,135V,148V,154KR,171AITV,177AG,180D,183NT,208G,225S
MH971815	MBA1120	Uganda	genomic RNA	subtype: A1	1	231	6A,15V,27I,30R,54M,58I,75D,83L,87Q,96I,116Q,120G,122Q,128D,131R,148V,154K,160PS,169F,171A,180D,183G,200S,203R,207AP,208G
MH971816	MBA1122	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14T,15L,27I,54M,58I,71D,83L,92P,111I,120S,124V,128D,148V,154K,169F,178T,180D,187D,200S,203R,207A,208G
MH971657	MBA1125	Uganda	genomic RNA	subtype: D	1	231	6L,13PQ,27I,41T,83L,116X,120S,148V,180D,203R,208G,225S
MH971658	MBA1126	Uganda	genomic RNA	subtype: D	1	231	6L,14N,15L,31G,33N,50H,83L,91V,96X,120S,128D,148V,180D,208H,210S
MH971659	MBA1129	Uganda	genomic RNA	subtype: D	1	231	6L,15L,27I,83L,91V,95H,110S,120GS,148V,178T,208G
MH971817	MBA1130	Uganda	genomic RNA	subtype: A1	1	231	6A,12Y,15V,16T,27I,30R,54L,58I,71D,83L,87Q,92P,96L,111P,120G,128D,148V,153V,154K,169F,178T,183G,191I,207T,208G,210S
MH971818	MBA1131	Uganda	genomic RNA	subtype: A1	1	231	2IV,6A,11I,12F,14S,15L,27I,30KR,31G,54M,58I,71D,83L,91V,111P,115V,116A,120G,128D,148V,154K,169F,178T,180D,200AS,203R,207AT,208G,228AT
MH971819	MBA1133	Uganda	genomic RNA	subtype: A1	1	231	6A,11IT,14PS,15M,27IV,31G,41T,54M,58I,59I,71D,83AMTV,92P,96IM,110N,111I,120G,123A,128D,135IV,142IV,148V,154K,169F,178T,180D,200S,203R,208G
MH971820	MBA1134	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14N,15L,27I,36I,45D,50Y,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,171V,178T,183G,200S,207T,208G
MH971821	MBA1136	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,13PQ,14S,15L,27I,54M,58I,71D,83L,91IV,92P,111P,120G,128D,148V,153IMV,154K,169F,171IV,178T,183G,204S,207T,208G
MH971660	MBA1137	Uganda	genomic RNA	subtype: D	1	231	6L,27I,41T,83LM,120S,148V,180D,199R,208G,225S
MH971661	MBA1138	Uganda	genomic RNA	subtype: D	1	231	6L,15IL,27I,33NS,41T,83L,91N,120S,148V,180D,199R,200NT,208G,225S
MH971822	MBA1139	Uganda	genomic RNA	subtype: A1	1	231	2V,6A,11AITV,12Y,15L,27I,48A,54M,58V,71D,83L,92P,111P,116A,120G,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G,225S
MH971823	MBA1141	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14P,15L,27I,30R,31G,54M,58I,71D,79D,83L,87Q,92P,111P,120H,128D,148V,153V,154K,169F,171I,178T,183G,187D,191I,200S,207S,208G,225S,230I
MH971824	MBA1142	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,12L,14T,15L,27I,31G,54M,58I,71D,83L,92P,111P,115IM,120GS,128D,148V,154K,169F,178T,180D,200S,203R,207T,208G
MH971825	MBA1143	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,12Y,15V,54M,58I,71D,83L,87Q,92P,96L,111P,120G,128D,148V,154K,169F,171A,178T,183G,200S,203R,207A,208G,225S
MH971662	MBA1144	Uganda	genomic RNA	subtype: D	1	231	2L,6L,10T,27I,78AV,83L,87P,96IM,98DE,116T,148V,153V,171I,180D,225S
MH971826	MBA1146	Uganda	genomic RNA	subtype: A1	1	231	6A,11IM,14N,15L,27I,47C,54M,58I,71D,83L,87Q,92P,96I,111P,115IM,116Q,120S,128D,148V,153V,154K,169F,171I,178T,183G,191IV,200S,203KR,207T,208G
MH971663	MBA1147	Uganda	genomic RNA	subtype: D	1	231	6L,14P,27I,79D,83L,116A,120S,148V,154K,171IV,180D
MH971664	MBA1148	Uganda	genomic RNA	subtype: D	1	231	6L,27I,41ST,71D,83L,91AV,98DE,120S,148V,180D,191IV,208G
MH971827	MBA1149	Uganda	genomic RNA	subtype: A1	1	231	6A,27I,41T,54M,58I,71D,83L,91A,92P,111I,120G,128D,135V,146C,148V,154K,163E,169F,171I,183G,207AT,208G,215L,225S,230I
MH971828	MBA1151	Uganda	genomic RNA	subtype: A1	1	231	2V,6A,11T,14P,15M,27I,54M,58I,71D,79D,83L,87HQ,92P,111I,120S,148V,154K,163E,169F,178T,187D,200S,203R,208G,225S
MH971829	MBA1152	Uganda	genomic RNA	subtype: A1	1	231	6A,11AITV,12Y,15V,16T,30R,54M,58I,71D,83T,86A,91V,92V,96L,111P,120A,128D,148V,153V,154K,169F,171I,178T,183G,191I,200S,207T,208G,216S,225S,228AS
MH971665	MBA1153	Uganda	genomic RNA	subtype: D	1	231	6L,14P,33N,44AS,83L,120S,148V,180D,184RW
MH971666	MBA1154	Uganda	genomic RNA	subtype: D	1	231	6L,15L,27I,33N,83L,120S,148V,180D,208G,225S
MH971830	MBA1155	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14N,15L,27I,45D,50HY,54M,58I,71D,83L,92P,111P,120GS,128D,148V,169F,178ST,180D,191I,200S,203R,208G
MH971667	MBA1156	Uganda	genomic RNA	subtype: D	1	231	6L,27I,50AT,83L,91A,92V,116A,120S,124V,128D,148V,180D,225S
MH971831	MBA1157	Uganda	genomic RNA	subtype: A1	1	231	3M,6P,10AP,11I,12Y,14P,15V,26A,27I,30R,41T,54M,58V,59I,71D,83L,87Q,91V,92AP,111P,120S,128D,148V,154K,169F,171C,178T,179PQ,184RW,200S,203R,204G,207A,208G
MH971668	MBA1158	Uganda	genomic RNA	subtype: D	1	231	6L,15IL,27I,83L,91V,110S,116AG,120S,123AP,148V,180D
MH971669	MBA1160	Uganda	genomic RNA	subtype: D	1	231	6L,15L,27I,41T,83M,87Q,91V,96I,98D,116T,120S,148V,154K,180D,208G,225S
MH971670	MBA1161	Uganda	genomic RNA	subtype: D	1	231	6L,14P,27I,41T,83L,87Q,110N,120S,148V,180D,208Q,210S
MH971832	MBA1162	Uganda	genomic RNA	subtype: A1	1	231	6A,10W,11IV,15V,27I,54M,58I,71D,83L,91IV,92P,111ILPT,120GS,128D,148V,154K,169F,178T,183G,203R,208G,210S
MH971833	MBA1164	Uganda	genomic RNA	subtype: A1	1	231	3IMV,6A,11AITV,14P,15F,27I,29D,31G,48L,54M,58I,71D,92P,111P,118I,120AG,128D,148V,169F,171C,180D,200S,203R,207S,208G,218CR,224AP,225S
MH971671	MBA1168	Uganda	genomic RNA	subtype: D	1	231	6L,27I,41T,83LV,91IV,96V,120S,148V,154K,180D,183T,184*W,225S
MH971834	MBA1169	Uganda	genomic RNA	subtype: A1	1	231	6A,10A,15L,26A,27I,30R,31G,54M,58I,71D,79D,83L,87HQ,92P,96IM,111P,116A,120DGNS,148V,154KR,169F,178T,180DE,187DE,200A,203R,207H,208G,225GS,230I
MH971672	MBA1170	Uganda	genomic RNA	subtype: D	1	231	6L,14N,15L,27I,41T,83L,87Q,91V,98D,116A,120S,148V,180D,208G
MH971835	MBA1171	Uganda	genomic RNA	subtype: A1	1	231	6A,10W,11T,15V,27I,31G,33N,50T,54MT,58I,71D,83LV,92P,110N,111IT,120G,128D,148V,153IV,154K,169F,171I,183G,187D,200A,203R,207T,208G,210S
MH971836	MBA1172	Uganda	genomic RNA	subtype: A1	1	231	6A,11IV,15V,27I,54M,58I,71D,83L,87Q,111P,115V,116A,120G,128D,148V,154K,169F,178T,183DGHR,200S,203R,207T,208G,225GS
MH971837	MBA1173	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14S,15L,27I,48I,54L,58I,71D,83L,87Q,92P,96L,111P,120S,128D,148ST,154K,169F,178ST,180D,183KN,187D,200S,203KR,208G,210S
MH971673	MBA1174	Uganda	genomic RNA	subtype: D	1	231	6L,14P,16A,27I,41T,71D,83L,86AV,87Q,91AV,96IM,116AT,120S,124IV,135V,148V,180D,230IV
MH971838	MBA1175	Uganda	genomic RNA	subtype: A1	1	231	6A,11IV,15M,27I,41ST,50T,54M,58I,71D,83L,92P,110NT,120S,128D,148V,154K,169F,178T,180D,191I,203R,207A,208G
MH971839	MBA1177	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14S,15L,27I,41T,54M,58I,71D,91V,111I,116A,120S,128D,148V,154K,169F,171C,178T,180D,187D,191I,203R,204G,208G
MH971840	MBA1178	Uganda	genomic RNA	subtype: A1	1	231	6A,14S,15L,27I,31G,45D,48L,54M,58I,71D,83L,87Q,92P,96L,120S,128D,148V,154K,169F,178T,200S,203R,208G
MH971674	MBA1179	Uganda	genomic RNA	subtype: D	1	231	6L,15IL,27I,83T,91IV,148V,171V,180D,225S
MH971841	MBA1180	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,15V,27I,48I,54M,58I,59I,71D,83L,87HQ,92P,96L,118I,120AGST,128D,154K,169F,178T,183G,203R,207T,208GR,209AT,225GS
MH971675	MBA1183	Uganda	genomic RNA	subtype: D	1	231	6L,11I,27I,41T,71D,83L,91V,116A,124V,148V,154K,177G,180D,208G
MH971676	MBA1184	Uganda	genomic RNA	subtype: D	1	231	6L,14P,15IL,27I,31S,41T,83L,91A,96LM,135V,148V,160PS,180D,203R,224LP,225S
MH971842	MBA1186	Uganda	genomic RNA	subtype: A1	1	231	6A,14P,15M,16T,27I,54M,58I,71D,79D,83T,92P,110N,120G,128D,148V,169F,171C,178ST,180D,187D,191I,207T,208G,225S
MH971843	MBA1189	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14N,15L,27I,45DE,50H,54M,58I,71D,83L,86I,92P,111P,120S,128D,133GW,148V,149GS,154KR,169F,171V,180D,185IM,200S,203R,207T,208G
MH971677	MBA1193	Uganda	genomic RNA	subtype: D	1	231	6L,27I,83L,87Q,110S,120S,148V,178ST,183DGNS,208G
MH971844	MBA1195	Uganda	genomic RNA	subtype: A1	1	231	6A,14H,15V,31G,44A,54V,58I,71D,83L,92P,111V,113D,120S,128D,148V,154K,169F,180D,183G,200S,203R,207S,208G,225S,230IV
MH971845	MBA1196	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,15V,27I,54M,58I,71D,83L,111T,116A,120G,128D,148V,154K,169F,178T,183G,191I,203R,208G
MH971678	MBA1197	Uganda	genomic RNA	subtype: D	1	231	6L,14P,27I,83T,91V,116Q,120S,148V,180D,183H
MH971846	MBA1198	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,12N,14P,15L,27I,29D,31G,33N,54M,58V,71D,83L,92P,111P,116A,120DGNS,128D,148V,154K,169F,178T,183HN,187D,200S,207S,208G
MH971847	MBA1199	Uganda	genomic RNA	subtype: A1	1	231	6A,9H,15L,26AV,27I,30R,31G,48AT,54M,58I,59IMV,71D,83IL,87Q,91V,92Q,96IM,98DE,111I,120HR,128D,148V,154K,169F,171AITV,174AS,178T,183G,200S,203R,207AT,208G
MH971848	MBA1203	Uganda	genomic RNA	subtype: A1	1	231	6A,11T,14P,15M,27I,54M,58I,71D,83L,87HQ,92P,110N,120S,128D,148V,154K,169F,178T,183G,187D,191I,207S,208G,210P,225S
MH971849	MBA1205	Uganda	genomic RNA	subtype: A1	2	231	3M,6T,12SY,14S,15L,16NSTY,27I,31N,54S,58V,71D,83L,87Q,92P,111P,116A,120G,128D,148V,154K,169F,171V,174S,180D,187D,203R,208G,210S
MH971850	MBA1206	Uganda	genomic RNA	subtype: A1	1	231	6P,11IV,12Y,14P,15V,27I,30R,31N,54M,58I,71D,83L,87Q,91V,111P,120S,128D,148V,169F,171V,180D,183G,200S,203R,207T,208G,210S,225S
MH971851	MBA1207	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,15L,26A,27I,30R,31G,50G,54M,58V,79D,83L,87Q,91Y,92P,96L,111P,116T,120S,148V,154K,169F,180D,185MR,190M,200S,203R,208G
MH971679	MBA1208	Uganda	genomic RNA	subtype: D	1	231	6L,10P,11I,27I,83L,91A,116A,120S,148V,154K,171V,180D,225S
MH971852	MBA1211	Uganda	genomic RNA	subtype: A1	1	231	6A,14AP,15L,27I,30R,31G,48N,54M,58I,71D,83L,92P,116A,120G,128D,148V,154K,169F,178T,183G,185MR,200S,203R,207S,208G,214IM
MH971680	MBA1212	Uganda	genomic RNA	subtype: D	1	231	6L,27I,36IV,83L,91V,110N,120HNRS,148V,180DE,208G,225S
MH971853	MBA1214	Uganda	genomic RNA	subtype: A1	1	231	6A,14S,15L,27I,41T,58V,71D,83L,92P,111P,120G,128D,148V,154K,163E,169F,178T,183G,200S,203R,208G
MH971854	MBA1215	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14S,15V,27I,54M,58I,71D,79D,83L,91V,111P,116A,120A,128D,148V,154K,169F,171IV,180D,183NS,191I,203R,207A,208G,210S,230IV
MH971855	MBA1217	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,12L,14T,15L,27I,54M,58I,62HR,71D,83L,86A,91V,92Q,111P,115L,116A,120S,128D,148V,154K,169F,171C,178T,180D,200S,203R,207ST,208G,225GS
MH971856	MBA1221	Uganda	genomic RNA	subtype: A1	1	231	2IV,6A,11T,14H,15L,19IT,27I,41T,50G,58I,71D,83L,91V,96L,111T,120G,148V,154K,169F,171V,177G,191I,203R,208G
MH971681	MBA1224	Uganda	genomic RNA	subtype: D	1	231	6L,14P,27I,31S,41T,83L,135V,148V,154K,170R,180D,203R,208G,225S
MH971857	MBA1225	Uganda	genomic RNA	subtype: A1	1	231	6A,11IT,15L,27I,33NS,50T,54M,58V,71D,83L,92P,111IT,120GS,128D,148V,154K,169F,171IV,178ST,183HN,187D,191IV,200AS,207T,208G,225GS
MH971682	MBA1226	Uganda	genomic RNA	subtype: D	1	231	6L,14P,15L,27I,29D,41T,83L,87Q,91V,110N,120S,148V,180D,208G,210S,225S
MH971858	MBA1231	Uganda	genomic RNA	subtype: A1	1	231	6A,10L,11I,12Y,13N,14P,15M,27I,31G,33N,54M,58I,71D,83L,87Q,92P,96Q,111P,120S,128D,148V,154K,169F,178T,183G,187DE,191I,203R,207A,208G,210ST
MH971683	MBA1232	Uganda	genomic RNA	subtype: D	1	231	6L,27I,41T,83L,120S,148V,180D,199R,225S
MH971859	MBA1233	Uganda	genomic RNA	subtype: A1	1	231	6A,11T,27I,36I,47T,50H,54M,58V,62HP,71D,83LV,92P,120S,124V,128D,129L,131R,148V,154K,169F,171AV,178AS,180D,187D,200S,203R,207AP,208G
MH971860	MBA1237	Uganda	genomic RNA	subtype: A1	1	231	6A,14S,15L,27I,54M,58I,71D,83L,86ELQV,92P,111P,120GS,128D,148V,153V,154K,169F,171I,180D,183G,187D,191IV,200S,207T,208G,225GS
MH971861	MBA1238	Uganda	genomic RNA	subtype: A1	1	231	6A,11M,15L,26A,27I,30R,31G,54M,58V,71D,83L,87Q,92P,96L,111P,128D,148V,154K,169F,178T,183G,187A,200S,203R,208G,225S,230I
MH971862	MBA1239	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14P,15L,27I,30R,31G,54M,58I,71D,83L,92P,111P,128D,148V,154K,169F,183G,187D,200S,203R,207AS,208G
MH971863	MBA1240	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14P,15L,27I,30R,50G,54M,58I,71D,83L,92Q,95H,111PS,116A,120G,131R,148V,154K,169F,180D,183G,187DE,191I,203R,204G,207S,208G,225S
MH971864	MBA1242	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,15V,27I,54M,58I,71D,83ILM,91V,111P,116A,120G,128D,148V,169F,178T,200S,203R,207AP,208G
MH971684	MBA1244	Uganda	genomic RNA	subtype: D	1	231	6L,14P,15L,27I,71D,83L,87HQ,91IV,116A,120G,148V,154K,177G,180D,208G,210S,225S
MH971865	MBA1245	Uganda	genomic RNA	subtype: A1	1	231	2V,6A,11I,12Y,15L,26A,27I,30R,31G,36I,45D,54M,58IV,71D,79D,83L,92P,111P,120G,146C,148V,152DE,153V,154K,164F,169F,171I,183G,187D,191I,200S,203KR,207S,208G,225S
MH971866	MBA1246	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,12Y,15L,16AS,17PT,27I,54M,58V,71D,83L,87HP,92P,96L,111P,131R,136M,148V,169F,180D,183NT,203R,207A,208G,230I
MH971685	MBA1247	Uganda	genomic RNA	subtype: D	1	231	6L,41T,78AV,83LV,91V,120S,179S,180D,183T,194AS,208G
MH971867	MBA1248	Uganda	genomic RNA	subtype: A1	1	231	6A,15V,27I,54M,58I,71D,87P,88V,91Y,92P,96L,111P,116A,120G,128DE,132K,148V,154K,169F,178T,187D,191IV,200S,203R,208G,225S
MH971868	MBA1250	Uganda	genomic RNA	subtype: A1	1	231	6A,12L,14N,15L,27I,54M,58I,71D,83L,92P,111P,115L,116A,118I,120G,128D,148V,154K,169F,178T,180D,203R,208G
MH971869	MBA1256	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,15L,27I,31G,48I,54M,58I,71D,83LV,92P,111P,128D,148V,153V,154K,169F,171I,178T,180D,200I,203R,204G,207S,208G
MH971686	MBA1260	Uganda	genomic RNA	subtype: D	1	231	6L,14N,27I,83M,91A,120S,148V,180D,208G,210S,225S
MH971870	MBA1261	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,15L,27I,48I,54M,58I,71D,83L,92P,111P,116A,120G,128D,148V,154K,169F,178T,181I,187D,200S,203R,208G
MH971871	MBA1262	Uganda	genomic RNA	subtype: A1	1	231	6A,27I,29D,54M,58I,71D,83AT,92P,111I,120S,148V,154K,169F,171C,180D,187D,191IV,203R,208G,225S
MH971687	MBA1264	Uganda	genomic RNA	subtype: D	1	231	6L,7R,11I,27I,41T,91N,96I,116A,120S,148V,180D,225S
MH971688	MBA1265	Uganda	genomic RNA	subtype: D	1	231	6L,14S,15L,27I,29D,41T,83L,87Q,91V,96I,110N,116T,120S,148V,180D,208G,210S,225S
MH971689	MBA1266	Uganda	genomic RNA	subtype: D	1	231	6L,27I,41T,83IMV,91Q,98DE,116A,120S,148V,180D,208G,225S
MH971872	MBA1269	Uganda	genomic RNA	subtype: A1	1	231	6A,9V,13N,14P,15L,27I,48V,50S,54M,58V,71D,81DE,83L,92P,102RS,111V,120S,131R,148V,169F,178T,191I,200S,203R,207A,208G,223EG,225S
MH971873	MBA1270	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14S,15L,27I,30R,31G,50G,54M,58I,83L,87Q,92P,96L,111P,128D,148V,154K,169F,171A,178T,183G,200S,203R,207T,208G
MH971874	MBA1271	Uganda	genomic RNA	subtype: A1	1	231	6A,11T,12Y,14S,15F,27I,54M,58V,68L,71D,83L,92P,111P,120A,128D,148V,154K,163E,169F,171I,180D,187D,191I,204AS,207PQ,208AEPQ,210ST,216ST
MH971690	MBA1273	Uganda	genomic RNA	subtype: D	1	231	6L,11IV,14N,27I,41T,83L,91V,120S,148V,154K,180D,198S,208G
MH971875	MBA1274	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14S,15L,27I,54M,58I,71D,87Q,92P,96L,98D,111P,116R,120A,128D,148V,154K,169F,171V,187D,191I,200S,208G,225S
MH971876	MBA1279	Uganda	genomic RNA	subtype: A1	1	231	6A,10P,11I,15V,27I,30R,31G,54M,58I,71D,78AV,83A,92P,111I,120GS,128D,148V,154K,169F,180D,200S,203R,207AS,208G,225S
MH971877	MBA1280	Uganda	genomic RNA	subtype: A1	1	231	6A,12Y,14S,15L,27I,50QR,54M,58V,71D,83L,87Q,92P,96L,111P,120G,128D,146C,148V,154K,169F,170R,178T,187D,207AP,208G
MH971878	MBA1281	Uganda	genomic RNA	subtype: A1	1	231	2V,6A,11I,12F,14S,15L,27I,30R,31G,54M,58I,71D,83L,91V,111P,115V,116A,120G,128D,148V,154K,169F,178T,180D,200A,203R,207A,208G
MH971691	MBA1283	Uganda	genomic RNA	subtype: D	1	231	14P,27I,41T,79D,83L,87HQ,91AV,120S,128D,136I,148V,180D,208G,213D
MH971879	MBA1287	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14S,15L,26A,27I,30R,31G,54M,58I,71D,83L,92P,111P,128D,148V,154K,163E,169F,180D,187D,200S,203R,207S,208G
MH971880	MBA1288	Uganda	genomic RNA	subtype: A1	1	231	6A,14V,15M,27I,29D,31G,41T,58I,71D,83L,87Q,92P,96L,111PT,120G,128D,148V,154K,169F,171V,177G,178T,187D,200S,203R,207A,208G
MH971692	MBA1289	Uganda	genomic RNA	subtype: D	1	231	6L,14P,27I,54AITV,71D,79D,83Q,91A,92P,120A,128DE,148V,154K,177G,208G,210N,225S
MH971693	MBA1290	Uganda	genomic RNA	subtype: D	1	231	6L,27I,83L,148V,180D,225S
MH971881	MBA1291	Uganda	genomic RNA	subtype: A1	1	231	3LM,6A,11T,12Y,15L,27I,33N,54M,58V,71D,83L,86A,87Q,91F,92P,111V,115M,120S,131R,148V,169F,178T,200S,203R,208G
MH971694	MBA1292	Uganda	genomic RNA	subtype: D	1	231	6L,27I,36IV,41A,45D,54S,83L,91N,116A,120A,148V,178ST,208AEPQ,210S
MH971695	MBA1295	Uganda	genomic RNA	subtype: D	1	231	6L,15L,41A,75D,83L,116A,120S,124V,148V,170R,177C,180D,191IV,208G,213D
MH971882	MBA1297	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,15L,31G,50T,54M,58I,71D,83L,87Q,92P,96L,111I,115V,120G,123AP,128D,148V,153V,154K,169F,171I,178T,187AE,200S,203KR,207S,208G
MH971696	MBA1298	Uganda	genomic RNA	subtype: D	1	231	6L,15IL,27I,33N,83L,87Q,91V,96L,120S,124IV,148V,180D,225S
MH971883	MBA1302	Uganda	genomic RNA	subtype: A1	1	231	6A,11IV,14AGPR,15F,21NS,27I,31G,33N,45D,54M,58V,71D,83ALSV,87HQ,92AP,111LP,120GS,148V,153IV,154K,169F,171V,178T,183H,200S,203R,204AT,207T,208G,225S
MH971884	MBA1303	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14S,15L,27I,30R,31G,54M,58I,59I,71D,83L,87HQ,92P,107ST,111P,120DGNS,123PS,128D,148V,154K,169F,171V,178T,183G,200S,203R,207S,208G
MH971885	MBA1304	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,15L,27I,30R,31G,48I,54M,58I,71D,83L,92P,111P,115IV,120NS,128D,148V,154K,169F,178T,180D,187D,200S,203R,208G
MH971697	MBA1307	Uganda	genomic RNA	subtype: D	1	231	6L,27I,71D,83L,87HQ,91AV,120S,148V,154K,177C,180D,183G,208Q,210S,225S
MH971886	MBA1308	Uganda	genomic RNA	subtype: A1	1	231	6A,11IV,14S,15L,27I,30R,54M,58I,71D,83L,87P,91V,98DE,111P,116A,120G,128D,148V,153V,154K,169F,171I,180D,183G,187D,200S,208G
MH971887	MBA1309	Uganda	genomic RNA	subtype: A1	1	231	6A,15V,27I,31G,54M,58I,71D,83L,92P,111M,120S,124IV,128D,148V,154K,169F,178T,180D,187D,203KR,208G,225S,230IV
MH971888	MBA1312	Uganda	genomic RNA	subtype: A1	1	231	6A,15V,27I,30R,54M,58I,71D,83L,87Q,91V,96L,120G,123AP,128D,148V,154K,169F,171A,180D,183G,200S,207T,208G,225S
MH971889	MBA1314	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14N,15L,27I,31G,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,180D,200S,203R,207T,208G
MH971698	MBA1316	Uganda	genomic RNA	subtype: D	1	231	6L,15L,27I,83L,91V,116A,120S,148V,171V,172LV,180D,225S
MH971890	MBA1317	Uganda	genomic RNA	subtype: A1	1	231	6A,15V,27I,30R,54M,58I,71D,78AV,83L,86A,91AV,96I,116Q,120S,128D,148V,154K,169F,171A,180D,183G,200S,207T,208G,225S
MH971891	MBA1319	Uganda	genomic RNA	subtype: A1	1	231	6A,10W,14S,15L,27I,54M,58V,71D,92P,111P,120G,128D,148V,153V,154K,169F,171I,183G,191I,200S,208G,225S
MH971892	MBA1323	Uganda	genomic RNA	subtype: A1	1	231	2IV,3MV,6A,14AG,15L,26A,27I,30R,31G,45D,54M,58V,71D,92P,107CST,111IT,120NS,148V,154K,162KR,169F,178T,200S,203R,207S,208G
MH971699	MBA1325	Uganda	genomic RNA	subtype: D	1	231	6L,27I,41T,50G,59I,83L,91V,120S,128D,148V,154K,180D,199R,225S
MH971700	MBA1326	Uganda	genomic RNA	subtype: D	1	231	6L,14S,15L,27I,41T,50A,54S,83M,91V,116A,135V,136M,141V,148V,208G,225S
MH971893	MBA1327	Uganda	genomic RNA	subtype: A1	1	231	6A,12Y,14S,27I,30R,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,171A,174AT,180D,183G,187D,200AS,203KR,207AITV,208G
MH971701	MBA1331	Uganda	genomic RNA	subtype: D	1	231	6L,27I,83L,91A,120S,148V,154K,171V,180D,225S
MH971702	MBA1332	Uganda	genomic RNA	subtype: D	1	231	6L,11I,15L,27I,50G,71D,83T,86M,87Q,96I,116AT,120A,128D,148V,154K,177G,180D,183Q,208G,225S
MH971894	MBA1335	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14S,15V,27I,54MV,58I,71D,83L,96IM,111PT,115IV,116A,120G,128D,148V,154K,169F,171V,177AG,180D,183GS,187D,200S,203R,207S,208G,225S
MH971895	MBA1336	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,12Y,14T,15L,27I,31G,33N,54M,58I,71D,87Q,91V,92P,96L,98Q,111P,115L,120S,125Q,128D,148V,154K,169F,178T,180D,200S,203R,204AT,207T,208G
MH971896	MBA1337	Uganda	genomic RNA	subtype: A1	1	231	6A,11IM,13N,14P,15L,27I,30R,31G,48I,54M,58I,71D,83L,92P,111P,115V,120S,128D,148V,154K,169F,178ST,183G,191IV,200S,203R,207S,208G,210S,225S
MH971897	MBA1338	Uganda	genomic RNA	subtype: A1	1	231	5S,6A,11IV,14P,15L,27I,29D,31G,33N,54M,58V,71D,92P,111P,116A,120G,123A,128D,148V,154K,169F,171V,178T,187D,200S,207T,208G,210S
MH971703	MBA1340	Uganda	genomic RNA	subtype: D	1	231	6L,15L,16ST,27I,83L,120S,136M,148V,183H,191IV,208G,225S
MH971704	MBA1341	Uganda	genomic RNA	subtype: D	1	231	6L,15L,27I,79D,83L,91V,120S,136M,148V,171V,180D,208H,225S
MH971898	MBA1342	Uganda	genomic RNA	subtype: A1	1	231	6A,9EQ,11I,14S,27I,50G,51DE,52LV,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,171V,178T,183G,200S,203R,207T,208G
MH971899	MBA1343	Uganda	genomic RNA	subtype: A1	1	231	6A,11IV,14S,15L,27I,38LP,41T,58V,71D,83L,92P,111P,120S,128D,148V,163E,169F,170R,171V,178ST,180DE,183DGNS,187D,200NT,203R,204AG,207AS,208G,215LM
MH971900	MBA1344	Uganda	genomic RNA	subtype: A1	1	231	6A,11M,15L,27I,54M,58I,71D,83L,87Q,92P,111P,120S,128D,148V,154K,169F,171A,178T,183G,200S,203R,207T,208G,225S
MH971705	MBA1346	Uganda	genomic RNA	subtype: D	1	231	6L,27I,41T,83L,110ST,120S,148V,163DE,180D,199R,225S
MH971706	MBA1347	Uganda	genomic RNA	subtype: D	1	231	6L,27I,41T,83L,91AV,120S,148V,154KR,178ST,180DE,199KR,208G,210S,225S
MH971901	MBA1348	Uganda	genomic RNA	subtype: A1	1	231	6A,12Y,14S,15L,26A,27I,30R,31G,36I,54M,58I,71D,87Q,91F,92P,96L,111T,116A,120H,128D,148V,154K,162K,169F,178T,187Q,203R,204G,207L,208G,210S,225S,230I
MH971707	MBA1352	Uganda	genomic RNA	subtype: D	1	231	6L,27I,83I,91V,120S,148V,180D
MH971902	MBA1354	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14P,15F,27I,30R,31G,54M,58I,71D,83L,87Q,92P,96I,110N,111T,116A,120S,128D,139H,148V,154K,163E,169F,171V,178ST,180D,187D,191I,200S,207T,208G,225S
MH971708	MBA1355	Uganda	genomic RNA	subtype: D	1	231	6L,14ACGS,27I,75D,83L,91IN,96IM,116AT,120S,148V,180D,183T,225S
MH971709	MBA1356	Uganda	genomic RNA	subtype: D	1	231	6L,27I,91P,96L,116A,124V,148V,171V,180D,225S
MH971710	MBA1357	Uganda	genomic RNA	subtype: D	1	231	6L,15FI,27I,41T,83L,98D,120S,148V,154K,180D,225S
MH971711	MBA1358	Uganda	genomic RNA	subtype: D	1	231	6L,14P,15L,27I,31G,33N,83L,87Q,91V,96I,110N,115V,116A,120H,148V,208G,210S
MH971903	MBA1359	Uganda	genomic RNA	subtype: A1	1	231	6A,14N,15L,27I,50PS,54IM,58IT,71D,83L,92AP,111LP,115L,120S,128D,148V,154K,169F,172FL,178T,180DE,187DE,200S,203R,204S,207PQ,208G,210ST
MH971904	MBA1362	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,13S,14P,15F,27I,30R,31G,54M,58I,71D,83L,87Q,92P,96L,111P,120G,128D,148V,154K,169F,171A,178T,183G,191I,200A,203R,207ST,208G,210S
MH971712	MBA1364	Uganda	genomic RNA	subtype: D	1	231	6L,15L,78IV,83L,91IV,116A,120S,148V,179S,180D,183T,225S
MH971713	MBA1365	Uganda	genomic RNA	subtype: D	1	231	6L,14P,15L,27I,31AS,41T,83L,91V,110N,115IV,120S,148V,180D,210S,225S
MH971905	MBA1366	Uganda	genomic RNA	subtype: A1	1	231	6A,11T,14S,15L,27I,31G,48I,54M,58I,71D,83L,92P,111ST,115L,116AG,118IM,120G,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G,225S
MH971906	MBA1369	Uganda	genomic RNA	subtype: A1	1	231	6A,12Y,15V,26A,27I,30R,36I,54M,58I,71D,83L,86A,87Q,91Y,92P,96L,98D,111P,120G,124V,128D,131R,148V,152E,153V,154K,169F,171V,180D,187DE,191I,200S,207T,208G,225GS
MH971907	MBA1370	Uganda	genomic RNA	subtype: A1	1	231	6A,14P,15L,27I,54M,58V,71D,83L,92P,111P,120G,123S,128D,142IMV,148V,154K,169F,178T,187D,200S,203R,208G,225S
MH971908	MBA1372	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14S,15L,54M,58V,71D,83L,92P,107A,111P,120S,128D,148V,154K,162K,169F,171A,178T,180D,191IV,200S,203KR,207T,208G,225AG
MH971909	MBA1374	Uganda	genomic RNA	subtype: A1	1	231	6A,11IV,14P,15L,26AV,27I,30R,44A,48I,54M,58I,71D,83L,92P,111P,116A,120G,128D,148V,154K,169F,171V,178T,183G,191IV,200S,203R,207T,208G
MH971714	MBA1375	Uganda	genomic RNA	subtype: D	1	231	6L,27I,83L,87Q,91V,98D,110S,120S,148V,180D,225S
MH971715	MBA1376	Uganda	genomic RNA	subtype: D	1	231	6L,14P,27I,29D,41T,83L,91V,110N,120S,148V,180D,194S,225S
MH971716	MBA1377	Uganda	genomic RNA	subtype: D	1	231	6L,15L,27IV,50G,59IV,83L,91V,107S,116A,120S,128D,148V,180D,210S,225S
MH971910	MBA1378	Uganda	genomic RNA	subtype: A1	1	231	6A,11IV,15V,27I,54M,58I,71D,83L,87Q,92P,96I,111I,120S,128D,148V,154K,169F,178T,183G,200S,203R,208G
MH971717	MBA1379	Uganda	genomic RNA	subtype: D	1	231	6L,14S,15L,27I,41T,71DE,83L,91A,120S,148V,154K,180D,191IV
MH971718	MBA1380	Uganda	genomic RNA	subtype: D	1	231	6L,10X,15IL,27I,68I,79D,83L,86ALPV,87Q,91V,98D,120S,148V,154KR,180D,191IV,194AS,230IV
MH971719	MBA1382	Uganda	genomic RNA	subtype: D	1	231	6L,27I,83L,148V,154KR,180D,225S
MH971911	MBA1383	Uganda	genomic RNA	subtype: A1	1	231	6A,15L,27I,47C,54M,58V,71D,83L,87Q,92P,93LP,96L,111A,120G,131R,148V,169F,178T,200AT,203R,207A,208G
MH971912	MBA1384	Uganda	genomic RNA	subtype: A1	1	231	6A,10H,14P,15L,27I,30R,31G,54M,58I,71D,79D,83L,92P,111P,112H,128D,148V,154K,169F,178T,183G,191I,200S,203R,207Q,208G,210S
MH971720	MBA1385	Uganda	genomic RNA	subtype: D	1	231	6L,14AS,15L,27I,41T,83L,91N,110S,120S,148V,154K,180D,208G,225S
MH971913	MBA1386	Uganda	genomic RNA	subtype: A1	1	231	6A,11IV,14N,15L,27I,54M,58I,71D,91P,96L,111P,116A,120A,128D,148V,154K,169F,178T,180D,187D,200S,203R,208G,225S,230I
MH971914	MBA1387	Uganda	genomic RNA	subtype: A1	1	231	6A,9H,11T,15L,26A,27I,30R,31G,50G,54M,58I,71D,79D,83L,87Q,90PT,92P,111P,120S,148V,153V,154K,169F,171I,178T,183S,200S,207S,208G
MH971915	MBA1389	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14S,15L,27I,30R,54M,58I,59I,71D,83L,86ILPT,87Q,91F,92P,96L,111P,116T,120S,128D,148V,154K,169F,178T,183G,187D,191IV,200S,208G
MH971916	MBA1391	Uganda	genomic RNA	subtype: A1	2	231	6A,11I,14S,15L,20LM,24GV,27I,31G,33N,54M,58I,71D,83L,86AV,111P,116A,120G,128D,148V,154K,169F,178T,180D,191I,200S,203R,208G
MH971721	MBA1392	Uganda	genomic RNA	subtype: D	1	231	6L,27I,54S,58A,78GR,83I,91V,120S,148V,160S,177C,180D,184*W,225S
MH971917	MBA1393	Uganda	genomic RNA	subtype: A1	1	231	6A,12Y,15V,27I,30R,54M,58I,71D,83L,86A,87Q,91V,96L,98D,111P,120S,128D,131R,148V,152E,153V,154K,169F,171V,178T,183G,200S,203R,207T,208G
MH971722	MBA1394	Uganda	genomic RNA	subtype: D	1	231	6L,15L,27I,41T,83L,91A,96LM,110S,120S,148V,154K,180D,194AS,225S
MH971918	MBA1397	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14P,15FILM,16ST,27I,54M,58I,71D,83L,92P,110NT,111IT,115IL,116A,120GS,124IV,128D,131R,148V,154KR,163E,169F,178T,180D,200ST,207T,208G,219LQ
MH971919	MBA1400	Uganda	genomic RNA	subtype: A1	1	231	6IMV,11I,14P,15M,17LP,27I,31G,54M,58I,71D,83L,86A,87Q,91Y,92P,93A,96I,98D,111I,115V,120G,128D,148V,169F,178T,180D,200S,203R,207T,208G,225S
MH971920	MBA1402	Uganda	genomic RNA	subtype: A1	1	231	3MV,6A,11I,14S,15V,27I,31G,48IT,54V,58I,62HP,71D,83L,91V,92P,111P,120S,128D,148V,154KR,169F,178T,180D,200S,203R,207T,208G,210S,225GS
MH971921	MBA1404	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14T,15L,27I,54M,58I,71D,83L,91V,111P,116A,120A,128D,148V,153V,154K,169F,171I,178T,183G,200S,203R,207AP,208G,225GS
MH971723	MBA1405	Uganda	genomic RNA	subtype: D	1	231	6L,27I,50G,71D,83L,91V,96LM,116A,120A,128D,148V,180D,191IV,199KR
MH971922	MBA1406	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14N,15L,24GV,27I,50HQ,54M,58I,71D,83L,87Q,92P,96L,111P,115IL,120GS,128D,148V,154K,169F,178T,180DE,183DGNS,200S,203R,207A,208G
MH971724	MBA1407	Uganda	genomic RNA	subtype: D	1	231	6L,15L,27I,65AT,83L,86EV,108NT,116A,148V,180D,208G,213DE,230I
MH971725	MBA1408	Uganda	genomic RNA	subtype: D	1	231	6L,14S,15L,27I,33NS,71DE,83I,120S,148V,180D,230IV
MH971923	MBA1409	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,15V,27I,31G,54IMT,58I,71D,79D,83L,92P,111T,120GS,128D,148V,154KR,169F,171IV,180D,203R,207T,208G
MH971924	MBA1410	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14NS,15L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,183G,187D,191I,200S,203R,207A,208G
MH971726	MBA1411	Uganda	genomic RNA	subtype: D	1	231	6FL,27I,36I,83L,86A,87Q,91V,96I,102G,116T,120S,128D,148V,179A,180D,183T,208G,225S
MH971925	MBA1412	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,15V,27I,54M,58I,71D,83L,87P,88AV,92P,96L,98D,111P,116T,120A,128D,148V,154K,169F,171V,180D,187D,203R,207AT,208G
MH971727	MBA1415	Uganda	genomic RNA	subtype: D	1	231	6L,15L,27I,41T,83L,86AP,87Q,91V,96I,98DE,110S,116T,120S,148V,154K,180D,225S
MH971926	MBA1416	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,15V,27I,54M,58I,71D,83L,111P,116A,120G,128D,148V,154K,169F,183G,190M,203R,208G,225S,230I
MH971927	MBA1418	Uganda	genomic RNA	subtype: A1	1	231	6A,15L,27I,48A,54M,58V,71D,83L,87Q,91Y,92P,96L,107I,111V,112PQ,113D,120G,131R,148V,169F,178T,183S,200S,203R,207A,208G
MH971928	MBA1420	Uganda	genomic RNA	subtype: A1	1	231	6A,9H,11I,13N,14P,15L,27I,30R,31G,48M,54M,58I,71D,83L,86AV,87Q,92PQ,96IM,120S,124V,128D,148V,154K,169F,178T,183G,191I,200S,203R,207S,208G,225S
MH971728	MBA1421	Uganda	genomic RNA	subtype: D	1	231	6L,14P,27I,50G,83L,87Q,91V,120S,128D,148V,180D,194AS,225S
MH971929	MBA1422	Uganda	genomic RNA	subtype: A1	1	231	6A,11M,15L,26A,27IV,30R,31G,54M,58I,59I,71D,79D,83L,87Q,92P,96L,111M,120S,124V,148V,169F,178T,183GS,200S,203R,208G,210S
MH971729	MBA1429	Uganda	genomic RNA	subtype: D	1	231	6M,14P,27I,50X,71DE,79D,83LQ,91V,96L,116Q,120HN,148V,154KR,170R,180D
MH971930	MBA1431	Uganda	genomic RNA	subtype: A1	1	231	5S,6A,11I,14S,15L,26A,27I,30R,31G,54M,58I,71D,81DE,83L,87Q,92P,111P,120H,128D,148V,154KR,169F,171A,178T,183G,200S,203R,207S,208G,210S
MH971931	MBA1433	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,15V,27I,31G,54M,58I,71D,83L,87Q,91IV,92P,96I,98D,111I,116AG,128D,148V,154K,169F,178T,180DE,200S,203R,207ST,208G,225GS
MH971730	MBA1434	Uganda	genomic RNA	subtype: D	1	231	6L,15L,27I,36I,83L,91V,110N,116A,148V
MH971932	MBA1437	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,12Y,15L,27I,54M,58V,71D,83L,92P,111T,115IM,120G,126IV,131R,148V,163E,169F,178T,180D,207T,208G,225S
MH971933	MBA1438	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,15V,31G,54M,58I,71D,83L,86A,87Q,96I,111P,116A,120G,123AV,128D,148V,154K,169F,178T,180D,200S,207T,208G
MH971934	MBA1439	Uganda	genomic RNA	subtype: A1	1	231	6A,11M,14N,15L,27I,54M,58I,71D,83L,87Q,92P,96L,111P,120S,128D,148V,154K,169F,178T,200S,203R,204S,207T,208G,230I
MH971731	MBA1445	Uganda	genomic RNA	subtype: D	1	231	6L,27I,83L,148V,180D,225S
MH971935	MBA1448	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14S,15L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,171V,178T,183G,200S,203R,207ST,208G
MH971732	MBA1449	Uganda	genomic RNA	subtype: D	1	231	6L,27I,83L,87P,91V,98D,120S,148V,180D,205M,208G,225S
MH971733	MBA1453	Uganda	genomic RNA	subtype: D	1	231	6L,14P,15L,27I,41T,50HNPT,91V,113D,120S,135V,148V,154K,180D,225S
MH971734	MBA1454	Uganda	genomic RNA	subtype: D	1	231	6L,14P,27I,44AS,50T,54I,83L,91IV,116A,120S,123A,128D,148V,154KR,180D,225S
MH971735	MBA1456	Uganda	genomic RNA	subtype: D	1	231	6L,27I,41T,83L,91N,120S,148V,154K,179X,180D,200I,204G,207Q,208G,225S
MH971736	MBA1457	Uganda	genomic RNA	subtype: D	1	231	6L,14S,15L,27I,41T,83LV,91N,120S,148V,154K,171V,180D,208AS,210S,225S
MH971936	MBA1459	Uganda	genomic RNA	subtype: A1	1	231	2V,6A,15L,26A,27I,30R,31G,36I,50*PQS,54M,58I,71D,79D,83L,92P,111P,120GS,146C,148V,153V,154K,169F,171I,183G,191I,200S,207S,208G,225S
MH971737	MBA1461	Uganda	genomic RNA	subtype: D	1	231	6L,27I,41T,50ST,54S,83M,120HN,148V
MH971937	MBA1462	Uganda	genomic RNA	subtype: A1	1	231	6A,11T,12Y,15L,27I,30R,31G,48L,54M,58I,71D,79D,83L,87HQ,92P,111P,116A,120S,124V,148V,154K,169F,171V,178T,183G,200S,203R,207S,208G,210S,225S
MH971738	MBA1464	Uganda	genomic RNA	subtype: D	1	231	14V,15L,27I,36I,50Y,56M,83L,87Q,91V,120S,124V,128D,148V,178ST
MH971938	MBA1466	Uganda	genomic RNA	subtype: A1	1	231	6A,15IL,27I,54M,58I,59IV,71D,83L,92P,111P,116A,118IM,120G,128D,148V,154K,169F,178T,183G,197DY,203R,208G,210S,225S,230I
MH971939	MBA1471	Uganda	genomic RNA	subtype: A1	1	231	6A,11T,15L,27I,50H,54M,58V,71D,83L,87Q,92P,96L,110N,118I,120G,129L,131R,148V,154KR,169F,171A,177AG,178T,200S,207PT,208G
MH971739	MBA1472	Uganda	genomic RNA	subtype: D	1	231	6L,27I,75D,83L,116A,120S,148V,154K,177G,208G,225S
MH971740	MBA1476	Uganda	genomic RNA	subtype: D	1	231	6L,15L,27I,41T,83L,116A,120S,148V,180D,208G
MH971940	MBA1477	Uganda	genomic RNA	subtype: A1	1	231	3I,6A,9R,15F,27I,30R,31G,54M,58I,71D,83L,86A,87Q,91IV,92P,96L,111P,128D,148V,154K,169F,178T,183AG,187DE,191I,203R,207AP,208G,216ST
MH971741	MBA1478	Uganda	genomic RNA	subtype: D	1	231	2V,6L,14P,27I,44A,50G,83L,87Q,91V,120S,148V,180D,225S
MH971941	MBA1480	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14N,15L,27I,54M,58I,71D,83LV,91V,111P,116A,120GS,128D,148V,154K,169F,171V,178T,183G,200S,203R,207S,208G,225S
MH971742	MBA1481	Uganda	genomic RNA	subtype: D	1	231	6L,15L,27I,41T,83L,91P,92V,96LM,120S,124V,148V,180D,191IV,208G,225S
MH971743	MBA1482	Uganda	genomic RNA	subtype: D	1	231	6L,14P,15L,27I,29D,41T,83L,91P,110N,116A,120S,128D,148V,154K,180D,225S
MH971942	MBA1483	Uganda	genomic RNA	subtype: A1	1	231	6P,11I,14P,15L,27I,33N,54M,58V,71D,83L,92P,96L,111P,120G,128D,148V,154K,169F,178T,180D,200S,203R,207A,208G,225S
MH971943	MBA1484	Uganda	genomic RNA	subtype: A1	1	231	6A,15L,27I,54M,58V,71D,83L,92P,111P,116A,120G,123A,128D,131R,148V,152E,154K,169F,178T,183DGNS,191IV,207A,208G
MH971944	MBA1485	Uganda	genomic RNA	subtype: A1	1	231	6A,10MT,14T,15L,27I,54M,58I,71D,83T,92P,111P,120G,128D,148V,154K,169F,178ST,180D,187D,200S,203R,207A,208G
MH971744	MBA1486	Uganda	genomic RNA	subtype: D	1	231	6L,15IL,27I,41T,50S,54S,83L,91IV,116AG,148V,180D,225S
MH971945	MBA1488	Uganda	genomic RNA	subtype: A1	1	231	6A,11I,14N,15L,27I,29D,54M,58V,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,183G,200S,207Q,208G
MH971745	MBA1490	Uganda	genomic RNA	subtype: D	1	231	6L,27I,41T,83L,116A,124V,148V,180D,221LV,225S,230AV
MH971946	MBA1491	Uganda	genomic RNA	subtype: A1	1	231	6A,9H,11I,14P,15F,16T,27I,30R,31G,54M,58I,71D,83L,92Q,111P,115V,116A,120G,128D,148V,154K,169F,178T,183G,200S,203R,207ST,208G
MH971746	MBA1494	Uganda	genomic RNA	subtype: D	1	231	6L,27I,29D,41T,50QR,83L,91IV,116A,120S,128D,148V,154K,171V,180D
MH971947	MBA1495	Uganda	genomic RNA	subtype: A1	1	231	6A,14T,15L,27I,29D,54M,58I,83L,87Q,92P,98D,111P,116A,120G,128D,148V,154K,178T,180D,183R,200S,203R,207T,208G,210ST,216A,225S
MH971747	MBA1496	Uganda	genomic RNA	subtype: D	1	231	6L,27I,83L,91V,98D,110S,120S,148V,178ST,194S,225S
MH971948	MBA1499	Uganda	genomic RNA	subtype: A1	1	231	6A,10P,15V,27I,30R,50T,54A,58I,71D,79DE,83L,87HP,91FI,92P,96IM,113DE,116GR,120S,128D,148V,154K,169F,171IT,180D,187D,191I,203R,207AP,208G,216ST,225S,230IV
MH971949	MBA1501	Uganda	genomic RNA	subtype: A1	1	231	6A,14T,15F,27I,31G,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,180D,183HN,187DE,200S,203R,207AT,208G
MH971950	MBA1503	Uganda	genomic RNA	subtype: A1	1	231	3I,6A,11I,13T,14PS,15F,16T,27I,30R,31G,54M,58I,71D,83L,87Q,92P,96L,111AP,115V,120G,128D,148V,154K,169F,178T,180D,187D,200S,207S,208G,230IV
MH971748	MBA1504	Uganda	genomic RNA	subtype: D	1	231	6S,13N,14P,27I,31S,41T,47AT,50H,83L,86A,87Q,91L,92P,94N,96L,115V,116A,120GS,124V,148V,180D,187D,203R,208G,225S
MH971951	MBA1506	Uganda	genomic RNA	subtype: A1	1	231	6A,14P,15V,27I,30R,54M,58I,71D,83L,91AV,120S,128D,131R,148V,154K,169F,171V,180D,183G,187DE,191I,200S,207T,208G

Genbank References: capsid (p24)

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