<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Vidal (2016) Unprecedented degree of human immunodeficiency virus type 1 (HIV-1) group M genetic diversity in the Democratic Republic of Congo suggests that the HIV-1 pandemic originated in Central Africa J. Virol. 74 (22), 10498-10507 (2000) 2.43e-149 62 62 Naive PBMC Direct PCR Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
AJ404232Democratic Republic genomic DNAsubtype A1422015L,47C,54M,71D,83M,92P,120S,148V,154K,169F,178T,180D,187D,203R,207A,208G
AJ404233Democratic Republic genomic DNAsubtype F21422015L,27I,71D,83L,87Q,92P,96L,98D,103N,116E,117*GR,120G,124V,132K,148V,154K,169F,178T,183G,185I,187D,197N,208G,214I
AJ404234Democratic Republic genomic DNAsubtype A1422054M,58I,71D,83M,86I,87Q,92P,96L,120G,124V,128D,131R,148V,153V,154K,169F,171I,178T,183G,191I,200S,203R,207T,208G
AJ404235Democratic Republic genomic DNAsubtype AE1422014P,15V,31G,33N,54L,58I,71D,83T,87Q,92P,96L,107S,128D,148V,169F,171A,178T,180D,187D,200S,207T,208G
AJ404236Democratic Republic genomic DNAsubtype1422027I,31G,71D,83L,86A,87Q,92P,96I,102G,110N,116T,120S,148V,169F,183G,187D,207S,208G,210S
AJ404237Democratic Republic genomic DNAsubtype AE1422031G,33N,54M,58I,71D,87Q,91L,92P,96L,102G,120S,148V,169F,178T,183G,200S,203R,207A,208G
AJ404238Democratic Republic genomic DNAsubtype K1422015L,27I,41T,71D,83T,92P,116A,120S,124V,148V,154K,169F,178T,180D,187D,205M,208G,210S
AJ404239Democratic Republic genomic DNAsubtype H1422054A,71D,83L,92P,116A,120G,123A,128D,148V,154K,169F,178T,187A,203R,208G,210S,211I
AJ404240Democratic Republic genomic DNAsubtype K1422015L,27I,41T,71D,83L,92P,116A,120S,124V,148V,154K,169F,171I,180D,187D,191I,207Q,208G,210S
AJ404241Democratic Republic genomic DNAsubtype1422015L,27I,31S,33N,41A,71D,83L,86A,91V,92Q,96L,107A,110S,116A,120A,124V,132K,148V,154K,169F,178T,183T,187D,200N,203R,208G,210S
AJ404242Democratic Republic genomic DNAsubtype A1422026A,27I,41T,54M,58I,59I,71D,86M,87Q,91L,92P,96L,111I,120G,148V,169F,178T,183H,187D,191I,203R,208G
AJ404243Democratic Republic genomic DNAsubtype G1422014P,15L,16T,31N,50G,71D,83L,86P,87Q,92P,96I,98D,100T,116R,120S,121T,131R,148V,169F,178T,183G,187D,203R,208G,210S
AJ404244Democratic Republic genomic DNAsubtype A1422015L,47C,54M,71D,83M,92P,111P,120S,148V,154K,169F,178T,180D,187D,203R,207A,208G
AJ404245Democratic Republic genomic DNAsubtype A1422054M,58I,71D,83A,92P,120S,123A,148V,169F,171A,178T,180D,194S,200S,208G
AJ404246Democratic Republic genomic DNAsubtype A1422014S,15M,26A,27I,54M,58I,71D,79D,83T,92P,110N,116A,120G,124V,148V,169F,188S,203R,204G,208G
AJ404247Democratic Republic genomic DNAsubtype A1422014P,27I,29D,54M,58I,71D,83T,91V,92P,110N,131R,148V,169F,178T,183G,203R,207Q,208G
AJ404248Democratic Republic genomic DNAsubtype1422027I,41T,71D,75D,83L,92P,120S,148V,169F,178T,203R,204G,207Q,208G,210S
AJ404249Democratic Republic genomic DNAsubtype A1422014S,15L,27I,41T,54M,58I,71D,83L,86A,87Q,91L,92P,96L,120S,128D,148V,154K,169F,177G,180D,203R,208G,220E
AJ404250Democratic Republic genomic DNAsubtype D1422015L,27I,71D,83L,113D,116A,148V,180D,208Q,210S
AJ404251Democratic Republic genomic DNAsubtype A1422015L,68I,71D,83L,92P,120S,148V,169F,178T,187D,200S,208G
AJ404252Democratic Republic genomic DNAsubtype G1422016T,71D,83T,86P,87Q,91F,92P,96I,98D,116A,148V,169F,178T,187D,208G,217S
AJ404253Democratic Republic genomic DNAsubtype A1422026A,27I,30R,41P,48P,54M,58I,71D,72P,83I,91V,92P,120S,128D,148V,169F,178T,203R,208G
AJ404254Democratic Republic genomic DNAsubtype G1422071D,83I,86P,87Q,92P,96I,110S,116T,120S,148V,169F,183G,187D,203R,208G
AJ404255Democratic Republic genomic DNAsubtype1422014P,15L,16T,27I,41T,54S,71D,83L,92P,110N,116A,120G,124V,148V,169F,187D,208G,210S
AJ404256Democratic Republic genomic DNAsubtype1422027I,33N,36I,41A,54S,83M,91M,93A,120S,148V,180D,205M,208G
AJ404257Democratic Republic genomic DNAsubtype1422015L,33N,54M,58V,71D,83T,92P,115V,120S,131R,148V,169F,171V,180D,207T,208G,209V
AJ404258Democratic Republic genomic DNAsubtype G1422044A,71D,83T,86Q,87P,91L,92P,96I,98D,100T,102G,109RS,116R,120S,148V,154K,169F,183G,187D,208G
AJ404259Democratic Republic genomic DNAsubtype1422014S,15L,27I,52M,71D,83T,87Q,91L,92P,120S,124V,148V,169F,171C,178T,203R,208G
AJ404260Democratic Republic genomic DNAsubtype K1422015V,17L,27I,71D,83L,92P,112A,116A,118I,120G,124V,148I,154K,169F,178T,187D,208G,210S
AJ404261Democratic Republic genomic DNAsubtype A1422015V,26A,27I,41T,54M,58I,59I,71D,83L,87Q,92P,96I,120S,128D,148V,169F,178T,203R,208G
AJ404262Democratic Republic genomic DNAsubtype A1422015M,27I,41T,54M,58I,71D,76K,83L,87Q,92P,94N,96I,120S,148V,169F,178T,200S,203R,208G
AJ404263Democratic Republic genomic DNAsubtype A1422071D,92P,120S,148V,169F,178T,187D,200S,203R,208G
AJ404264Democratic Republic genomic DNAsubtype K1422015L,27I,41T,71D,83L,92P,110N,116A,120S,124V,148V,154K,169F,178T,180D,187D,205M,208G,210S
AJ404265Democratic Republic genomic DNAsubtype A1422015V,27I,31G,33N,41T,54S,58I,71D,92P,120S,148V,154K,169F,178T,187D,200V,203R,204G,208G
AJ404266Democratic Republic genomic DNAsubtype J1422015L,27I,71D,116A,120G,124V,148V,169F,171A,178T,180D,187D,207S,208G
AJ404267Democratic Republic genomic DNAsubtype1422014P,44A,54I,71D,79D,83L,91V,120S,148V,154K,169F,180D,187D,208G
AJ404268Democratic Republic genomic DNAsubtype G1422050H,54G,58S,71D,83I,86P,87Q,92P,96I,116R,120S,148V,169F,178T,183G,187D,203R,208G
AJ404269Democratic Republic genomic DNAsubtype G1422015L,27I,54G,58V,71D,92P,120S,148V,169F,178T,187D,203R,208G
AJ404270Democratic Republic genomic DNAsubtype G1422015L,71D,83I,87Q,92P,96I,98D,110S,116R,120S,148V,169F,180D,187D,208G,210S
AJ404271Democratic Republic genomic DNAsubtype C1422027I,31G,33N,36I,41A,83L,87Q,91Y,92P,93A,96I,116A,120G,124V,128D,148V,154K,169F,178T,180D,203R,208G,210S
AJ404272Democratic Republic genomic DNAsubtype A1422030R,47C,71D,83L,92P,120S,148V,169F,171V,180D,187D,200A,207T,208G
AJ404273Democratic Republic genomic DNAsubtype J1422014P,15L,27I,31G,33N,71D,83L,91V,110N,116A,118I,120G,121N_GGN,122Q,148V,169F,178T,187D,203R,207A,208G
AJ404274Democratic Republic genomic DNAsubtype A1422014S,26A,27I,41T,54M,58I,71D,83L,86I,87Q,92P,120S,128D,148V,169F,178T,200S,203R,208G,210S
AJ404275Democratic Republic genomic DNAsubtype K1422015L,27I,33N,71D,83T,92Q,107S,116A,120S,124V,148V,169F,171A,178T,180D,187D,207S,208G
AJ404276Democratic Republic genomic DNAsubtype F11422027I,71D,83L,92P,116Q,120S,124V,128D,148V,169F,171C,178T,187D,199R
AJ404277Democratic Republic genomic DNAsubtype G1422041T,71D,83L,86Q,87Q,92P,96I,116T,120G,148V,154K,169F,178T,183G,187D,199R,203R,208G,210S
AJ404278Democratic Republic genomic DNAsubtype D1422014P,15M,27I,41T,52M,83L,87Q,91V,98D,120S,128D,136M,148V,180D,203R
AJ404279Democratic Republic genomic DNAsubtype A1422041T,71D,83L,87Q,92P,107A,110N,120S,148V,154K,169F,178T,187D,200S,203R,208G,220E
AJ404280Democratic Republic genomic DNAsubtype G1422016T,71D,83T,86P,87Q,91V,92P,96I,98D,116A,148V,169F,187D,207S,208G
AJ404281Democratic Republic genomic DNAsubtype F11422014S,15M,27I,54M,58I,71D,83L,91V,92P,115V,116Q,120G,124V,128D,148V,154K,169F,178T,183G,187D,203R,208G
AJ404282Democratic Republic genomic DNAsubtype G1422027I,41T,71D,83I,86Q,87Q,91Y,92P,96I,116T,148V,154K,169F,178T,180D,187D,203R,208G
AJ404283Democratic Republic genomic DNAsubtype A1422071D,87Q,92P,120S,148V,169F,178T,183H,200S,203R
AJ404284Democratic Republic genomic DNAsubtype A1422027I,41T,54M,58I,71D,72A,83T,87Q,92P,120G,124V,148V,169F,178T,187D,203R,208G
AJ404285Democratic Republic genomic DNAsubtype D1422014P,15L,27I,83L,87Q,116A,128D,136M,148V,180D,208Q
AJ404286Democratic Republic genomic DNAsubtype A1422027I,41T,54M,58I,71D,83L,91A,92P,120S,128D,148V,169F,178T,203R,208G
AJ404287Democratic Republic genomic DNAsubtype1422027I,41T,71D,83L,86A,87Q,92P,107A,120S,148V,154K,169F,178T,183S,203R,204G,207Q,208G,210S,218*CW
AJ404288Democratic Republic genomic DNAsubtype K1422027I,71D,83L,86A,87Q,91L,92P,96I,116A,148V,154K,169F,171A,178T,187D,204G,207Q,208G
AJ404289Democratic Republic genomic DNAsubtype A1422027I,54M,58I,75D,78V,83L,92P,120S,128D,148V,169F,171A,178T,180D,183S,203R,208Q
AJ404290Democratic Republic genomic DNAsubtype A1422014P,44A,54M,58I,75D,83L,92P,118I,120G,148V,169F,178T,180D,188I,203R,208Q
AJ404291Democratic Republic genomic DNAsubtype A1422014S,27I,54M,58I,71D,92P,120S,135V,148V,169F,171A,178T,194S,200S,203R,208G
AJ404292Democratic Republic genomic DNAsubtype C1422027I,41T,45D,54S,59I,68I,71D,83L,116A,128D,148V,169F,178T,180D,187D,203R,208G
AJ404293Democratic Republic genomic DNAsubtype A1422015M,27I,36I,41A,44A,45D,49R,54C,56M,58I,71D,79D,83T,92P,120G,148V,169F,178T,191I,200N,203R,208G

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