Genbank References: capsid (p24)

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Genbank References: capsid (p24)

Authors	Title	Citation	E-value	# in Gb	#Pts	ART	Source	Cloning	StudyType
Kijak (2017)	Rare HIV-1 transmitted/founder lineages identified by deep viral sequencing contribute to rapid shifts in dominant quasispecies during acute and early infection	PLoS Pathog. 13 (7), E1006510 (2017)	7.75e-147	230	6	Naive	Plasma	SGS	Acute infection

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Accession	IsolateName	Country	MolType	Note	FirstAA	LastAA	MutList
KY580473	10463v01_01	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580474	10463v01_02	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580475	10463v01_03	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G,210A
KY580476	10463v01_04	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580477	10463v01_05	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580478	10463v01_06	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580479	10463v01_07	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580480	10463v01_09	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580481	10463v01_10	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83LS,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580482	10463v01_11	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580483	10463v09_01	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580484	10463v09_02	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580485	10463v09_04	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580486	10463v09_05	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580487	10463v09_06	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580488	10463v09_07	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580489	10463v09_09	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580490	10463v09_10	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,200S,207S,208G
KY580491	10463v09_11	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580492	10463v14_01L	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,134IM,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580494	10463v14_02L	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580496	10463v14_03L	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580498	10463v14_05L	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580500	10463v14_06L	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580503	10463v14_08L	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580505	10463v14_09L	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580506	10463v14_10L	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580508	10463v14_11L	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580510	10463v14_12L	Uganda	genomic RNA	subtype: A1/D recombinant	1	231	6A,14P,15L,27I,30R,54M,58I,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171A,178T,183G,191I,200S,207S,208G
KY580512	20225v01_01	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S,228X
KY580513	20225v01_02	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580514	20225v01_03	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580515	20225v01_04	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580516	20225v01_05	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580517	20225v01_06	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580518	20225v01_07	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580519	20225v01_08	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580520	20225v01_09	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580521	20225v01_10	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580522	20225v09_01	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580523	20225v09_02	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580524	20225v09_03	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580525	20225v09_04	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,30KR,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580526	20225v09_05	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,80*,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580527	20225v09_06	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580528	20225v09_07	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580529	20225v09_10	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580530	20225v09_11	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580531	20225v14_02	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580532	20225v14_04	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580533	20225v14_05	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,199KQ,200G,203R,207T,208G,225S
KY580534	20225v14_06	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580535	20225v14_07	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580536	20225v14_08	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580537	20225v14_09	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580538	20225v14_10	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580539	20225v14_11	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580540	20225v14_13	Kenya	genomic RNA	subtype: A1/C recombinant	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,178T,180D,200G,203R,207T,208G,225S
KY580541	40061v03_01	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580542	40061v03_02	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580543	40061v03_03	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580544	40061v03_04	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580545	40061v03_05	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580546	40061v03_06	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580547	40061v03_07	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580548	40061v03_08	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580549	40061v03_09	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580550	40061v03_10	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580551	40061v03_11	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580552	40061v05_01	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,72S,83T,92P,120S,134L,141V,148I,169F,178T,200S,203R,207T,208G,225S
KY580553	40061v05_02	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,91IV,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580554	40061v05_04	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,99L,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580555	40061v05_05	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,72S,83T,92P,120S,134L,141V,148I,169F,178T,200S,203R,207T,208G,225S
KY580556	40061v05_06	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580557	40061v05_07	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,81DG,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580558	40061v05_08	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580559	40061v05_09	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580560	40061v05_10	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580561	40061v05_15	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,72S,83T,92P,120S,134L,141V,148I,169F,178T,200S,203R,207T,208G,225S
KY580562	40061v07_01	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,72S,83T,92P,120S,134L,141V,148I,154GR,169F,178T,200S,203R,207T,208G,225S
KY580563	40061v07_02	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,72S,83T,92P,120S,134L,141V,148I,169F,178T,200S,203R,207T,208G,225S
KY580564	40061v07_03	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,72S,83T,92P,120S,134L,141V,148I,169F,178T,200S,203R,207T,208G,225S
KY580565	40061v07_04	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,72S,83T,92P,120S,134L,141V,148I,169F,178T,200S,203R,207T,208G,225S
KY580566	40061v07_05	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,72S,83T,92P,120S,134L,141V,148I,169F,178T,200S,203R,207T,208G,225S
KY580567	40061v07_06	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580568	40061v07_08	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,72S,83T,92P,120S,134L,141V,148I,169F,178T,200S,203R,207T,208G,225S
KY580569	40061v07_09	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,72S,83T,92P,120S,134L,141V,148I,169F,178T,200S,203R,207T,208G,225S
KY580570	40061v07_10	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,72S,83T,92P,120S,134L,141V,148I,169F,178T,200S,203R,207T,208G,225S
KY580571	40061v07_11	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,72S,83T,92P,120S,134L,141V,148I,169F,178T,200S,203R,207T,208G,225S
KY580572	40061v10_01	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,98EG,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580573	40061v10_02	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580574	40061v10_03	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580575	40061v10_04	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580576	40061v10_05	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580577	40061v10_06	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580578	40061v10_07	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580579	40061v10_08	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580580	40061v10_09	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580581	40061v10_10	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580711	40061v14_01	Thailand	genomic DNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580713	40061v14_02	Thailand	genomic DNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580714	40061v14_02L	Thailand	genomic DNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580716	40061v14_03	Thailand	genomic DNA	subtype: CRF01_AE	1	231	6A,14P,15V,28K,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,215I,225S
KY580717	40061v14_03L	Thailand	genomic DNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580718	40061v14_04L	Thailand	genomic DNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580720	40061v14_05L	Thailand	genomic DNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580725	40061v14_12L	Thailand	genomic DNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580726	40061v14_13L	Thailand	genomic DNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,141V,148V,178T,200A,203R,207T,208G,225S
KY580727	40061v14_15L	Thailand	genomic DNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,72S,83T,92P,120S,124L,141V,148V,178T,200A,203R,207T,208G,225S
KY580582	40100v01_01	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580583	40100v01_03	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580584	40100v01_05	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580585	40100v01_06	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580586	40100v01_07	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580587	40100v01_08	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580588	40100v01_09	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580589	40100v01_11	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580590	40100v01_12	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,7*Q,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580591	40100v01_13	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580592	40100v04_01	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580593	40100v04_02	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580594	40100v04_03	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580595	40100v04_04	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580596	40100v04_06	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580597	40100v04_09	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580598	40100v04_10	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580599	40100v04_11	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580600	40100v04_12	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580601	40100v04_13	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580602	40100v06_01	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580603	40100v06_02	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,114QR,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580604	40100v06_03	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580605	40100v06_04	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580606	40100v06_05	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580607	40100v06_06	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580608	40100v06_07	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580609	40100v06_08	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,146G,148V,154K,178T,200S,207T,208G,225S
KY580610	40100v06_09	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580611	40100v06_10	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580612	40100v07_01	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580613	40100v07_02	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580614	40100v07_04	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207S,208G,225S
KY580615	40100v07_05	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580616	40100v07_06	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580617	40100v07_07	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580618	40100v07_08	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580619	40100v07_09	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580620	40100v07_10	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580621	40100v07_11	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580622	40100v09_01	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580623	40100v09_02	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,80G,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580624	40100v09_03	Thailand	genomic RNA	subtype: CRF01_AE	1	231	3M,6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580625	40100v09_04	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580626	40100v09_06	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580627	40100v09_07	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207S,208G,225S
KY580628	40100v09_10	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580629	40100v09_11	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580630	40100v09_16	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580631	40100v09_17	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580632	40100v09_19	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580633	40100v14_01	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580634	40100v14_02	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580635	40100v14_03	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580636	40100v14_04	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580637	40100v14_05	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,147PT,148V,154K,178T,200S,207T,208G,225S
KY580638	40100v14_06	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580639	40100v14_08	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580640	40100v14_09	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580641	40100v14_10	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,145CY,148V,154K,178T,200S,207T,208G,225S
KY580642	40100v14_11	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,16A,31G,33N,48A,54M,58V,72A,83T,92P,120G,128D,148V,154K,178T,200S,207T,208G,225S
KY580643	40265v02_02	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580644	40265v02_03	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580645	40265v02_04	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,143K,178T,200S,203R,207T,208G,225S
KY580646	40265v02_05	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580647	40265v02_06	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,98K,120S,178T,200S,203R,207T,208G,225S
KY580648	40265v02_07	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580649	40265v02_08	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580650	40265v02_09	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580651	40265v02_10	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580652	40265v02_11	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580653	40265v02_12	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580654	40265v02_13	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580655	40265v09_01	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580656	40265v09_01L	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580658	40265v09_02	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580659	40265v09_02L	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580661	40265v09_03L	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580662	40265v09_05L	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,128K,132G,178T,200S,203R,207T,208G,225S
KY580665	40265v09_07L	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,71K,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580667	40265v09_08L	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580669	40265v09_09L	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580671	40265v09_10L	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580673	40265v14_01	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580674	40265v14_02	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580675	40265v14_03	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,96MV,120S,178T,200S,203R,207T,208G,225S
KY580676	40265v14_04	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580677	40265v14_05	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580678	40265v14_06	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580679	40265v14_07	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,223R,225S
KY580680	40265v14_08	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,60GV,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580681	40265v14_10	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580682	40265v14_11	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,48ST,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580683	40265v14_12	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6T,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,178T,200S,203R,207T,208G,225S
KY580684	40436v02_01	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,200S,207T,208G
KY580685	40436v02_02	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,200S,207T,208G
KY580686	40436v02_03	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,172FL,200S,207T,208G
KY580687	40436v02_04	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,200S,207T,208G
KY580688	40436v02_05	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,200S,207T,208G
KY580689	40436v02_06	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123A,128D,133*,148V,171AT,200S,207T,208G
KY580690	40436v02_07	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,200S,207T,208G
KY580691	40436v02_08	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,200S,207T,208G
KY580692	40436v02_09	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,200S,207T,208G
KY580693	40436v02_10	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,200S,207T,208G
KY580694	40436v09_01	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,200S,207T,208G
KY580695	40436v09_02	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,200S,207T,208G
KY580696	40436v09_03	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,200S,207T,208G
KY580697	40436v09_04	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,103DG,110N,120G,123A,128D,148V,200S,207T,208G
KY580698	40436v09_06	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,200S,207T,208G
KY580699	40436v09_08	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,200S,207T,208G
KY580700	40436v09_09	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,200S,207T,208G
KY580701	40436v14_01	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,200S,207T,208G
KY580702	40436v14_02	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,200S,207T,208G
KY580703	40436v14_03	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120G,123A,128D,148V,200S,207T,208G
KY580704	40436v14_05	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,200S,207T,208G
KY580705	40436v14_06	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123AT,128D,148V,200S,207T,208G
KY580706	40436v14_07	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,200S,207T,208G
KY580707	40436v14_08	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,200S,207T,208G
KY580708	40436v14_09	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,200S,207T,208G
KY580709	40436v14_10	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,200S,207T,208G
KY580710	40436v14_11	Thailand	genomic RNA	subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120G,123A,128D,148V,200S,207T,208G

Genbank References: capsid (p24)

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