<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
O'Connell (2016) Control of HIV-1 in elite suppressors despite ongoing replication and evolution in plasma virus J. Virol. 84 (14), 7018-7028 (2010) 1.06e-171 201 6 Naive Plasma; PBMC SGS Reservoir

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
GU993505ES01.c1.0805USAAug-2005genomic DNA12316M,83L,194S
GU993496ES01.c1.1208USADec-2008genomic DNA12316M,83L,194S
GU993506ES01.c2.0805USAAug-2005genomic DNA12316M,83L,136M,194S
GU993497ES01.c2.1208USADec-2008genomic DNA12316M,83L,194S
GU993507ES01.c3.0805USAAug-2005genomic DNA12316M,83L,194S
GU993498ES01.c3.1208USADec-2008genomic DNA12316M,83L,194S
GU993508ES01.c4.0805USAAug-2005genomic DNA12316M,83L,194S
GU993499ES01.c4.1208USADec-2008genomic DNA12316M,83L,194S,220E
GU993509ES01.c5.0805USAAug-2005genomic DNA12316M,83L,194S
GU993500ES01.c5.1208USADec-2008genomic DNA12316M,83L,194S
GU993510ES01.c6.0805USAAug-2005genomic DNA12316M,14P,83L,139H,194S
GU993501ES01.c6.1208USADec-2008genomic DNA12316M,83L,194S
GU993511ES01.c7.0805USAAug-2005genomic DNA12316M,83L,194S
GU993502ES01.c7.1208USADec-2008genomic DNA12316M,83L,194S
GU993503ES01.c8.0805USAAug-2005genomic DNA12316M,83L,194S
GU993504ES01.c9..0805USAAug-2005genomic DNA12316M,83L,194S
GU993512ES01.p1.0706USAJul-2006genomic DNA12316M,14P,83L,194S
GU993515ES01.p1.1208USADec-2008genomic DNA12316M,14P,83L,194S
GU993513ES01.p2.0706USAJul-2006genomic DNA12316M,14P,83L,139H,194S
GU993514ES01.p3.0706USAJul-2006genomic DNA12316M,14P,83L,194S
GU993517ES01.p3.1208USADec-2008genomic DNA12316M,14P,83L,194S
GU993367ES3.P1.0609USAJun-2009genomic DNA123115M,87Q,110N,116A,154K,199R
GU993371ES3.P1.1109USANov-2009genomic DNA123115M,87Q,110N,116A,154K,199R
GU993368ES3.P2.0609USAJun-2009genomic DNA123115M,87Q,110N,116A,154K,199R
GU993369ES3.P3.0609USAJun-2009genomic DNA123115M,87Q,110N,116A,154K,199R
GU993370ES3.P4.0609USAJun-2009genomic DNA123115M,87Q,110N,116A,154K,199R
GU993311ES31.c1.0908USASep-2008genomic DNA12316M,16T,31S,83L,116E,154K,180D
GU993321ES31.C1.1209USADec-2009genomic DNA12316M,16T,31S,83L,154K,180D
GU993320ES31.c10.0908USASep-2008genomic DNA12316M,16T,31S,83L,154K,180D
GU993312ES31.c2.0908USASep-2008genomic DNA12316M,16T,31S,83L,154K,180D
GU993322ES31.C2.1209USADec-2009genomic DNA12316M,16T,31S,83L,154K,180D
GU993313ES31.c3.0908USASep-2008genomic DNA12316M,16T,31S,83L,154K,180D
GU993323ES31.C3.1209USADec-2009genomic DNA12316M,16T,31S,83L,154K,180D
GU993314ES31.c4.0908USASep-2008genomic DNA12316M,16T,31S,83L,154K,180D
GU993324ES31.C4.1209USADec-2009genomic DNA12316M,16T,31S,83L,154K,180D
GU993315ES31.c5.0908USASep-2008genomic DNA12316M,16T,31S,83L,94CGRS,154K,180D
GU993325ES31.C5.1209USADec-2009genomic DNA12316M,16T,31S,83L,154K,180D
GU993316ES31.c6.0908USASep-2008genomic DNA12316M,16T,31S,83L,154K,180D
GU993326ES31.C6.1209USADec-2009genomic DNA12316M,16T,31S,83L,154K,180D
GU993317ES31.c7.0908USASep-2008genomic DNA12106M,16T,31S,83L,154K,180D,201L,210P
GU993327ES31.C7.1209USADec-2009genomic DNA12316M,16T,31S,83L,116E,154K,180D
GU993318ES31.c8.0908USASep-2008genomic DNA12316M,16T,31S,83L,154K,180D
GU993328ES31.C8.1209USADec-2009genomic DNA12316M,16T,31S,83L,154K,180D
GU993319ES31.c9.0908USASep-2008genomic DNA12316M,16T,31S,83L,154K,180D
GU993333ES31.p1.0809USAAug-2009genomic DNA12316M,15L,16T,31S,83L,116A,128K,154K,180D
GU993329ES31.p1.0908USASep-2008genomic DNA12316M,16T,31S,83L,116A,154K,180D
GU993335ES31.P1.0909USASep-2009genomic DNA12316M,16T,31S,83L,116A,121T,154K,180D
GU993334ES31.p2.0809USAAug-2009genomic DNA12316M,15L,16T,31S,83L,116A,154K,180D
GU993330ES31.p2.0908USASep-2008genomic DNA12316M,16T,31S,83L,116A,154K,180D
GU993336ES31.P2.0909USASep-2009genomic DNA12316M,16T,31S,43ILV,83L,96IM,100RS,116A,121INST,154K,180D,231FL
GU993331ES31.p3.0908USASep-2008genomic DNA12316M,16T,31S,83L,116A,154K,180D
GU993337ES31.P3.0909USASep-2009genomic DNA12316M,16T,31S,83L,116A,121T,154K,180D
GU993332ES31.p4.0908USASep-2008genomic DNA12316M,15L,16T,31S,83L,116A,154K,180D
GU993375ES7.P1.0108USAJan-2008genomic DNA123114P,41T,83L,110N,154K,194S,203R
GU993381ES7.P1.0808USAAug-2008genomic DNA123114P,41T,83L,110N,154K,180D,194S,203R
GU993388ES7.P1.0809USAAug-2009genomic DNA123114P,15L,41T,83L,110N,154K,194S,203R,225S
GU993372ES7.P1.1106USANov-2006genomic DNA123114P,41T,83L,110N,154K,180D,194S,203R
GU993397ES7.P10.0809USAAug-2009genomic DNA123114P,15L,41T,83L,110N,154K,194S,203R,225S
GU993398ES7.P11.0809USAAug-2009genomic DNA123114P,15L,41T,83L,110N,154K,194S,203R,225S
GU993399ES7.P12.0809USAAug-2009genomic DNA123114P,15L,41T,83L,110N,154K,194S,203R,225S
GU993400ES7.P13.0809USAAug-2009genomic DNA123114P,15L,41T,83L,110N,154K,194S,203R,225S
GU993376ES7.P2.0108USAJan-2008genomic DNA123114P,41T,83L,110N,154K,180D,194S,203R
GU993382ES7.P2.0808USAAug-2008genomic DNA123114P,41T,83L,110N,154K,180D,194S,203R
GU993373ES7.P2.1106USANov-2006genomic DNA123114P,41T,83L,110N,154K,180D,194S,203R,225S
GU993386ES7.P2.1108USANov-2008genomic DNA123114P,41T,83L,110N,154K,166A,180D,194S,203R
GU993383ES7.P3.0808USAAug-2008genomic DNA123114P,41T,83L,110N,154K,180D,194S,203R
GU993390ES7.P3.0809USAAug-2009genomic DNA123114P,15L,41T,83L,110N,154K,194S,203R,225S
GU993374ES7.P3.1106USANov-2006genomic DNA123114P,41T,83L,110N,154K,180D,194S,203R
GU993387ES7.P3.1108USANov-2008genomic DNA123114P,15L,41T,83L,110N,154K,180D,194S,203R
GU993378ES7.P4.0108USAJan-2008genomic DNA123114P,41T,83L,110N,154K,180D,194S,203R
GU993384ES7.P4.0808USAAug-2008genomic DNA123114P,41T,83L,110N,154K,180D,194S,203R
GU993391ES7.P4.0809USAAug-2009genomic DNA123114P,15L,41T,83L,110N,154K,194S,203R,225S
GU993379ES7.P5.0108USAJan-2008genomic DNA123114P,41T,83L,110N,154K,194S,203R
GU993392ES7.P5.0809USAAug-2009genomic DNA123114P,15L,41T,83L,110N,154K,194S,203R,225S
GU993380ES7.P6.0108USAJan-2008genomic DNA123114P,41T,83L,110N,154K,180D,194S,203R
GU993393ES7.P6.0809USAAug-2009genomic DNA123114P,15L,41T,83L,110N,154K,194S,203R,225S
GU993395ES7.P8.0809USAAug-2009genomic DNA123114P,15L,41T,83L,110N,154K,194S,203R,225S
GU993477ES8.C1.0407USAApr-2007genomic DNA123183L,148S,154K,194S,225A
GU993479ES8.C1.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993472ES8.C1.DR+.0407USAApr-2007genomic DNA123183L,148S,154K,194S,225A
GU993452ES8.C1.DR+.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993489ES8.C10.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993461ES8.C10.DR+.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993491ES8.C11.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993462ES8.C11.DR+.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993490ES8.C12.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993463ES8.C12.DR+.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993492ES8.C13.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993464ES8.C13.DR+.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993493ES8.C14.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993465ES8.C14.DR+.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993495ES8.C15.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993466ES8.C15.DR+.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993480ES8.C16.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993467ES8.C16.DR+.1009USAOct-2009genomic DNA123115M,83L,112T,116A,148S,154K,191I,194S,225A
GU993494ES8.C17.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993468ES8.C17.DR+.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993469ES8.C18.DR+.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993470ES8.C19.DR+.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993478ES8.C2.0407USAApr-2007genomic DNA123183L,148S,154K,194S,225A
GU993481ES8.C2.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993473ES8.C2.DR+.0407USAApr-2007genomic DNA123183L,148S,154K,194S,225A
GU993453ES8.C2.DR+.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993471ES8.C20.DR+.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993483ES8.C3.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993476ES8.C3.DR+.0407USAApr-2007genomic DNA123183L,148S,154K,194S,225A
GU993454ES8.C3.DR+.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993484ES8.C4.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993474ES8.C4.DR+.0407USAApr-2007genomic DNA123183L,148S,154K,162KMRT,194S,225A
GU993455ES8.C4.DR+.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993482ES8.C5.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993475ES8.C5.DR+.0407USAApr-2007genomic DNA123115M,83L,112S,115V,116A,148S,154K,194S,225A
GU993456ES8.C5.DR+.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993485ES8.C6.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993457ES8.C6.DR+.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993486ES8.C7.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993458ES8.C7.DR+.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993488ES8.C8.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993459ES8.C8.DR+.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993487ES8.C9.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993460ES8.C9.DR+.1009USAOct-2009genomic DNA123183L,148S,154K,194S,225A
GU993425ES8.p1.080409USAAug-2009genomic DNA123115M,83L,112T,116A,148S,154K,194S,225A
GU993433ES8.P1.082709USAAug-2009genomic DNA123183L,148S,154K,194S,225A
GU993441ES8.p1.1009USAOct-2009genomic DNA123115M,83L,112S,116A,148S,154K,194S,225A
GU993450ES8.p10.1009USAOct-2009genomic DNA12316M,15M,83L,112S,116A,148A,154K,194S,225A
GU993451ES8.p11.1009USAOct-2009genomic DNA123115M,83L,112S,116A,148S,154K,194S,225A
GU993426ES8.p2.080409USAAug-2009genomic DNA123115M,83L,112T,116A,148S,154K,191I,194S,225A
GU993434ES8.P2.082709USAAug-2009genomic DNA123183L,148S,154K,194S,225A
GU993442ES8.p2.1009USAOct-2009genomic DNA12316M,15M,51N,83L,112A,116A,148S,154K,194S,225A
GU993427ES8.p3.080409USAAug-2009genomic DNA123115M,83L,112T,116A,148S,154K,191I,194S,225A
GU993435ES8.P3.082709USAAug-2009genomic DNA123183L,148S,154K,194S,225A
GU993443ES8.p3.1009USAOct-2009genomic DNA123115M,83L,112T,116A,148S,154K,191I,194S,225A
GU993428ES8.p4.080409USAAug-2009genomic DNA123115M,83L,93APST,112S,115V,116A,148S,154K,194S,225A
GU993436ES8.P4.082709USAAug-2009genomic DNA123115M,83L,112T,116A,148S,154K,191I,194S,225A
GU993444ES8.p4.1009USAOct-2009genomic DNA123115M,83L,112T,116A,148S,154K,191I,194S,225A
GU993429ES8.p5.080409USAAug-2009genomic DNA123115M,83L,112T,116A,148S,154K,191I,194S,225A
GU993437ES8.P5.082709USAAug-2009genomic DNA123183L,148S,154K,194S,225A
GU993445ES8.p5.1009USAOct-2009genomic DNA12316M,15M,83L,112A,116A,148S,154K,194S,225A
GU993430ES8.p6.080409USAAug-2009genomic DNA123115M,83L,112S,115V,116A,148S,154K,194S,225A
GU993438ES8.P6.082709USAAug-2009genomic DNA123115M,83L,112T,116A,148S,154K,191I,194S,225A
GU993446ES8.p6.1009USAOct-2009genomic DNA123115M,83L,112T,116A,148A,154K,191I,194S,225A
GU993431ES8.p7.080409USAAug-2009genomic DNA123115M,83L,112S,115V,116A,148S,154K,194S,225A
GU993439ES8.P7.082709USAAug-2009genomic DNA123115M,83L,112T,116A,148S,154K,191I,194S,225A
GU993447ES8.p7.1009USAOct-2009genomic DNA123115M,83L,112T,116A,148S,154K,194S,225A
GU993432ES8.p8.080409USAAug-2009genomic DNA123115M,83L,112T,116A,148S,154K,191I,194S,225A
GU993440ES8.P8.082709USAAug-2009genomic DNA123115M,83L,112T,116A,148A,154K,191I,194S,225A
GU993448ES8.p8.1009USAOct-2009genomic DNA12316M,15M,83L,112S,116A,148A,154K,194S,225A
GU993449ES8.p9.1009USAOct-2009genomic DNA12316M,15M,83L,112S,116A,148A,154K,194S,225A
GU993413ES8.pl1.0109USAJan-2009genomic DNA12316M,15M,83L,112V,116A,148S,154K,194S,225A
GU993401ES8.pl1.0708USAJul-2008genomic DNA123115M,83L,112T,115V,116A,148S,154K,194S,225A
GU993406ES8.pl1.1108USANov-2008genomic DNA12316M,15M,83L,112V,116A,148S,154K,194S,225A
GU993422ES8.pl10.0109USAJan-2009genomic DNA123115M,83L,112A,115V,116A,148S,154K,194S,225A
GU993423ES8.pl11.0109USAJan-2009genomic DNA123115M,83L,112T,116A,148A,154K,194S,225A
GU993424ES8.pl12.0109USAJan-2009genomic DNA123115M,83L,112T,116A,148S,154K,191I,194S,225A
GU993414ES8.pl2.0109USAJan-2009genomic DNA123115M,83L,112T,116A,148S,154K,191I,194S,225A
GU993402ES8.pl2.0708USAJul-2008genomic DNA123115M,83L,112T,116A,148A,154K,191I,194S,225A
GU993407ES8.pl2.1108USANov-2008genomic DNA123115M,83L,112T,115V,116A,148S,154K,194S,225A
GU993415ES8.pl3.0109USAJan-2009genomic DNA12316M,15M,83L,112V,116A,148S,154K,194S,225A
GU993403ES8.pl3.0708USAJul-2008genomic DNA123115M,83L,112T,115V,116A,148S,154K,194S,225A
GU993408ES8.pl3.1108USANov-2008genomic DNA123115M,83L,112T,115V,116A,148S,154K,194S,225A
GU993416ES8.pl4.0109USAJan-2009genomic DNA12316M,15M,83L,112V,116A,148S,154K,194S,225A
GU993404ES8.pl4.0708USAJul-2008genomic DNA123115M,83L,112T,116A,148S,154K,191I,194S,225A
GU993409ES8.pl4.1108USANov-2008genomic DNA123115M,83L,112T,115V,116A,148S,154K,194S,225A
GU993417ES8.pl5.0109USAJan-2009genomic DNA123115M,83L,112A,115V,116A,148S,154K,194S,225A
GU993405ES8.pl5.0708USAJul-2008genomic DNA12316M,15M,83L,112V,116A,148S,154K,194S,225A
GU993410ES8.pl5.1108USANov-2008genomic DNA123115M,83L,112A,115V,116A,148S,154K,194S,225A
GU993418ES8.pl6.0109USAJan-2009genomic DNA12316M,15M,83L,112V,116A,148S,154K,190LMV,194S,225A
GU993411ES8.pl6.1108USANov-2008genomic DNA123115M,83L,112T,116A,148S,154K,191I,194S,225A
GU993419ES8.pl7.0109USAJan-2009genomic DNA123115M,83L,112T,116A,148S,154K,191I,194S,225A
GU993412ES8.pl7.1108USANov-2008genomic DNA123115M,83L,112T,116A,148S,154K,191I,194S,225A
GU993420ES8.pl8.0109USAJan-2009genomic DNA123115M,83L,112S,116A,148S,154K,194S,225A
GU993421ES8.pl9.0109USAJan-2009genomic DNA123115M,83L,112T,116A,148S,154K,191I,194S,225A
GU993338ES9.c1.1108USANov-2008genomic DNA123114P,15L,31S,59I,83L,110N,116A,154K
GU993347ES9.C1.1109USANov-2009genomic DNA12312V,14P,15L,31S,59I,83L,110N,116A,139H,154K
GU993344ES9.C1.DR+.1109USANov-2009genomic DNA2723131S,59I,83L,110N,116A,139H,154K
GU993339ES9.c2.1108USANov-2008genomic DNA12312V,14P,15L,31S,59I,83L,110N,116A,139H,154K
GU993348ES9.C2.1109USANov-2009genomic DNA12312V,14P,15L,31S,59I,83L,110N,116A,139H,154K
GU993346ES9.C2.DR+.1109USANov-2009genomic DNA12312V,14P,15L,31S,59I,83L,110N,116A,139H,154K
GU993340ES9.c3.1108USANov-2008genomic DNA123114P,15L,31S,59I,83L,110N,116A,154K
GU993349ES9.C3.1109USANov-2009genomic DNA123114P,15L,31S,59I,83L,110N,116A,136M,154K,225S
GU993345ES9.C3.DR+.1109USANov-2009genomic DNA12312V,14P,15L,31S,59I,83L,110N,116A,139H,154K
GU993341ES9.c4.1108USANov-2008genomic DNA123114P,15L,31S,59I,83L,110N,116A,154K
GU993350ES9.C4.1109USANov-2009genomic DNA12312V,14P,15L,31S,59I,83L,110N,116A,139H,154K
GU993343ES9.c5.1108USANov-2008genomic DNA123114P,15L,31S,59I,83L,110N,116A,139H,154K
GU993351ES9.C5.1109USANov-2009genomic DNA1123114P,15L,31S,59I,83L,110N,116A,139H,154K
GU993342ES9.c6.1108USANov-2008genomic DNA123114P,15L,31S,59I,83L,110N,116A,154K
GU993352ES9.C6.1109USANov-2009genomic DNA123114P,15L,31S,59I,83L,110N,116A,139H,154K
GU993353ES9.C7.1109USANov-2009genomic DNA123114P,15L,31S,59I,83L,110N,116A,154K
GU993362ES9.P1.1009USAOct-2009genomic DNA123114P,15L,31S,59I,83L,110N,116A,136M,154K,225S
GU993354ES9.p1.1108USANov-2008genomic DNA123114P,15L,31S,59I,83L,110N,116A,136M,154K,225S
GU993364ES9.P1.1109USANov-2009genomic DNA123114P,15L,31S,59I,83L,110N,116A,136M,154K,225S
GU993363ES9.P2.1009USAOct-2009genomic DNA123114P,15L,31S,59I,83L,110N,116A,136M,154K,225S
GU993355ES9.p2.1108USANov-2008genomic DNA123114P,15L,31S,59I,83L,110N,116A,136M,154K,225S
GU993365ES9.P2.1109USANov-2009genomic DNA123114P,15L,31S,59I,83L,110N,116A,136M,154K,225S
GU993356ES9.p3.1108USANov-2008genomic DNA123114P,15L,31S,59I,83L,110N,116A,136M,154K,225S
GU993366ES9.P3.1109USANov-2009genomic DNA123114P,15L,31S,59I,83L,110N,116A,136M,154K,225S
GU993357ES9.p4.1108USANov-2008genomic DNA123114P,15L,31S,59I,83L,110N,116A,136M,154K,225S
GU993358ES9.p5.1108USANov-2008genomic DNA123114P,15L,31S,59I,83L,110N,116A,136M,154K,225S
GU993359ES9.p6.1108USANov-2008genomic DNA123114P,15L,31S,59I,83L,110N,116A,136M,154K,225S
GU993360ES9.p7.1108USANov-2008genomic DNA123114P,15L,31S,59I,83L,110N,116A,136M,154K,225S
GU993361ES9.p8.1108USANov-2008genomic DNA123114P,15L,31S,59I,83L,110INST,111FILV,116A,136M,154K,225S

Database

Resources

Team