<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Pessoa (2015) Enhanced detection of viral diversity using partial and near full-length genomes of human immunodeficiency virus Type 1 provirus deep sequencing data from recently infected donors at four blood centers in Brazil Transfusion (2014) In press 9.41e-155 40 40 Naive PBMC NGS Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
KJ84978610BR_MG007Brazilgenomic DNAPBMCsubtype: B12316L,27I,33N,36I,83L,116A,128D,148V,187D,225S
KJ84978710BR_MG010Brazilgenomic DNAPBMCsubtype: BCF112316V,10W,11T,14V,15L,71D,83L,92P,110N,116Q,120S,124V,148V,169F,178T,183G,194S,207T,208G,230I
KJ84979210BR_MG017_1Brazilgenomic DNAPBMCsubtype: BF112316L,44A,48A,71D,83L,91V,110N,116Q,120S,124V,148V,154K,169F,180D,183G,187D,191I,203R,205M,208G,225S,230I
KJ84979910BR_MG029Brazilgenomic DNAPBMCsubtype: B12316A,12Y,14S,48P,54I,58A,83L,87Q,91V,115V,116A,123A,180D,194S,208G
KJ84980210BR_MG034Brazilgenomic DNAPBMCsubtype: BF112316L,27I,71D,92P,116Q,120S,124V,148V,169F,187D,188S,208G
KJ84980410BR_MG035Brazilgenomic DNAPBMCsubtype: B12316L,14P,15L,27I,83L,116A,148V,180D
KJ84978410BR_PE001Brazilgenomic DNAPBMCsubtype: B12316L,83L,120H,128D,136M,154K,178T,216S
KJ84978810BR_PE010Brazilgenomic DNAPBMCsubtype: B12316L,83L,180D,225S
KJ84979510BR_PE018Brazilgenomic DNAPBMCsubtype: BC12316L,14P,15M,27I,41T,71D,83L,86A,87Q,91V,96I,116T,135V,154K,169F,178T,179P,187D,203R,208G
KJ84980010BR_PE029Brazilgenomic DNAPBMCsubtype: BCF112316L,14P,44A,79D,83L,110N,116A,120G,123A,136M,148V,154K,180D
KJ84980310BR_PE034Brazilgenomic DNAPBMCsubtype: B12316L,83L,91A,96L,115V,116A,120H,136M,141V,178T,208G
KJ84982310BR_PE056Brazil2010genomic DNAPBMCgenotype: B12316L,27I,44A,71D,83L,120H,148V,154K,177G,207Q,208G,225S,230I
KJ84981710BR_PE091Brazilgenomic DNAPBMCsubtype: B12316L,14P,27I,83L,87Q,91V,96I,110N,116A,148V,178T,208Q,225S
KJ84981810BR_PE097Brazilgenomic DNAPBMCsubtype: B12316L,15L,41T,83L,120H,128D,136M,148S,154K,180D
KJ84981910BR_PE098Brazilgenomic DNAPBMCsubtype: B12316L,14S,15M,27I,83L,116A,154K,208G,210N,225A
KJ84982010BR_PE100Brazilgenomic DNAPBMCsubtype: B12316L,15L,83L,86A,87Q,91V,96V,116A,120H,148V,180D,225S,230I
KJ84979110BR_RJ015Brazilgenomic DNAPBMCsubtype: BF112316L,14S,15L,27I,71D,83I,86P,87Q,92P,96I,116Q,120S,124V,148V,154K,169F,178T,183G,187D,210S
KJ84979710BR_RJ023Brazilgenomic DNAPBMCsubtype: BF112316L,27I,44A,71D,92P,116Q,120S,124V,148V,169F,178T,187D,208G,210S
KJ84979810BR_RJ026Brazilgenomic DNAPBMCsubtype: BF1123115L,44A,71D,75D,83L,92P,116Q,120S,124V,148V,154K,160S,169F,171C,177G,178T,208Q,225A
KJ84980110BR_RJ032Brazilgenomic DNAPBMCsubtype: B12316L,83L,91A,96I,116Q,120S,148V,154K,169F,178T
KJ84982610BR_RJ041Brazil2010genomic DNAPBMCgenotype: BF112316L,83L,87Q,115V,120S,132K,171C,185I,214I,216S,220K,223E
KJ84980910BR_RJ046Brazilgenomic DNAPBMCsubtype: CRF70_BF112316M,27I,71D,87Q,92P,96I,116Q,120S,148I,169F,178T,187D,208G,225S
KJ84981110BR_RJ050Brazilgenomic DNAPBMCsubtype: B12316L,15L,83L,110N,116A,154K,180D,205M,208G,225S
KJ84981310BR_RJ053Brazilgenomic DNAPBMCsubtype: BF112316L,15L,71D,83L,87Q,92P,96I,110S,112A,116Q,120S,148V,169F,178T,183G,187D,208G,230I
KJ84981410BR_RJ054Brazilgenomic DNAPBMCsubtype: B12316L,15L,27I,83L,86P,87Q,91V,120S,148V,178T
KJ84978510BR_SP003Brazilgenomic DNAPBMCsubtype: B12316L,14P,41A,83L,120H,132K,136I,170R,191I
KJ84978910BR_SP011Brazilgenomic DNAPBMCsubtype: CRF45_cpx12316A,27I,41T,54M,58I,71D,83L,87Q,92P,96L,120S,128D,148V,169F,178T,203R,208G
KJ84979010BR_SP014Brazilgenomic DNAPBMCsubtype: B12316L,15L,27I,41T,83L,110N,116A,148V,160S,208G
KJ84979410BR_SP017Brazilgenomic DNAPBMCsubtype: BF112316L,41T,83L,98D,127R,154K,160S
KJ84979610BR_SP021Brazilgenomic DNAPBMCsubtype: B12314R,6L,11M,27I,41T,116D,120H,213K,214I,220E,222R,223E,229K
KJ84980510BR_SP038Brazilgenomic DNAPBMCsubtype: B12316L,27I,41A,83L,132K,136M,148V
KJ84980610BR_SP042Brazilgenomic DNAPBMCsubtype: B12316L,83L,154K,180D,225S
KJ84980710BR_SP043Brazilgenomic DNAPBMCsubtype: B12316L,27I,36I,83L,148V,180D,208G
KJ84980810BR_SP045Brazilgenomic DNAPBMCsubtype: B12316L,27I,83L,148V,170R,180D
KJ84982410BR_SP046Brazil2010genomic DNAPBMCgenotype: CF112316L,14S,15M,17A,27I,41T,71D,91P,96L,115V,116A,120A,124V,148V,154K,169F,178T,180D,187D,203R,208G
KJ84981010BR_SP048Brazilgenomic DNAPBMCsubtype: BF112316M,41T,83L,148S,154K
KJ84982710BR_SP049Brazil2010genomic DNAPBMCgenotype: B12316L,14S,15L,41T,83L,128D,136M,154K,178T
KJ84981210BR_SP050Brazilgenomic DNAPBMCsubtype: B12316L,14P,15L,41T,83L,87Q,91V,96I,98D,116A,120H,154K,180D,208G,225S
KJ84981510BR_SP055Brazilgenomic DNAPBMCsubtype: B12316L,27I,41T,78G,83L,91V,120S,148V,154K,178T,191I
KJ84981610BR_SP057Brazilgenomic DNAPBMCsubtype: BF1123114S,15L,71D,83L,116Q,124V,148V,169F,178T,183G,187D,208G

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