Genbank References: capsid (p24)

HOME Genotype-Rx Genotype-Pheno Genotype-Clinical hivdb program

Genbank References: capsid (p24)

Authors	Title	Citation	E-value	# in Gb	#Pts	ART	Source	Cloning	StudyType
Hardy (2025)	Aberrant strand transfer events across multiple stages of reverse transcription shape the heterogeneous landscape of the HIV-1 reservoir	Unpublished	7.98e-168	48

Download sequences

Accession	IsolateName	Coll Date	MolType	Note	FirstAA	LastAA	MutList
PX241914	01032_04	10-Jan-2005	genomic DNA	defective provirus;subtype: B	1	231	6L,36I,83M,87Q,120S,148V,180D
PX241915	01032_05	10-Jan-2005	genomic DNA	defective provirus;subtype: B	1	231	6L,36I,83M,87Q,91V,120S,148V,180D
PX241916	01032_06	10-Jan-2005	genomic DNA	defective provirus;subtype: B	1	225	6L,83M,98D,120S,148I,216S,222A,223S,225Q
PX241917	01032_08	10-Jan-2005	genomic DNA	defective provirus;subtype: B	1	231	6L,83M,98D,100K,120S,148I,216S
PX241918	01032_09	10-Jan-2005	genomic DNA	defective provirus;subtype: B	1	231	6L,36I,83M,87Q,106R,120S,148V,180D
PX241919	01032_10	10-Jan-2005	genomic DNA	defective provirus;subtype: B	1	231	6L,36I,83M,87Q,98D,106R,120S,148V,216S
PX241921	01032_13	10-Jan-2005	genomic DNA	defective provirus;subtype: B	1	231	6L,36I,83M,87Q,98D,112H,120S,138I,148V,180D
PX241923	01032_18	10-Jan-2005	genomic DNA	defective provirus;subtype: B	1	231	6L,36I,83M,87Q,94R,106R,120S,148V,180D
PX241925	01032_24	10-Jan-2005	genomic DNA	defective provirus;subtype: B	1	231	6L,83M,98D,120S,148I,216S
PX241927	01032_27	10-Jan-2005	genomic DNA	defective provirus;subtype: B	1	229	6L,36I,83M,87Q,98D,120S,148V,180D,221X,226E,227R,228S,229V
PX241928	01032_29	10-Jan-2005	genomic DNA	defective provirus;subtype: B	1	231	6L,83M,98D,120S,148I,216S
PX241931	01032_34	10-Jan-2005	genomic DNA	defective provirus;subtype: B	1	231	6L,13R,36I,83I,87Q,91V,98D,120S,148V,180D
PX241933	01032_44	10-Jan-2005	genomic DNA	defective provirus;subtype: B	1	231	6L,36I,83M,87Q,98D,120S,148V,180D
PX241935	01032_48	10-Jan-2005	genomic DNA	defective provirus;subtype: B	1	231	6L,36I,83M,87Q,120S,148V,180D
PX241956	01032_5_J44	20-Mar-2003	genomic DNA	defective provirus;subtype: B	1	231	6L,36I,83M,87Q,120S,148V,180D
PX241938	01032_53	10-Jan-2005	genomic DNA	defective provirus;subtype: B	1	231	6L,13H,36I,46R,83M,87Q,120S,148V,180D
PX241940	01032_61	10-Jan-2005	genomic DNA	defective provirus;subtype: B	1	231	6L,27I,36I,83M,91V,120S,148V,180D
PX241961	02018_5_U10	06-Mar-2009	genomic DNA	defective provirus;subtype: B	1	231	6L,27I,41T,87Q,120S,148V,216S
PX241949	02018_5_U2	06-Mar-2009	genomic DNA	defective provirus;subtype: B	1	231	6L,27I,41T,87Q,120S,148V,208G,216S
PX241967	02018_5_U3	06-Mar-2009	genomic DNA	defective provirus;subtype: B	1	231	6L,27I,36I,87Q,148V,216S
PX241957	02018_5_U44	06-Mar-2009	genomic DNA	defective provirus;subtype: B	1	231	6L,27I,30N,41T,148V,216S
PX241948	02018_5_U5	06-Mar-2009	genomic DNA	defective provirus;subtype: B	1	231	6L,27I,148V,216S
PX241958	02018_5XL_U126	20-Mar-2003	genomic DNA	defective provirus;subtype: B	1	231	6L,83M,98D,120S,148I,216S
PX241968	02018_5XL_U127	06-Mar-2009	genomic DNA	defective provirus;subtype: B	1	231	6L,27I,60R,76K,80,81N,82K,83M,97K,98D,116K,117,120S,128K,132K,133*,137R,146N,148V,206R,209G,212K,214I,216S,220R
PX241970	02018_5XL_U140	20-Mar-2003	genomic DNA	defective provirus;subtype: B	1	231	6L,27I,84L,118I,148V,208G,216S
PX241909	02018_C16	08-Dec-2011	genomic DNA	defective provirus;subtype: B	1	225	6L,41T,98D,120S,199N,216S,222A,223S,225Q
PX241910	02018_C17	08-Dec-2011	genomic DNA	defective provirus;subtype: B	1	231	6L,27I,41T,87Q,91V,98D,120S,148V,208G,216S
PX241911	02018_C18	08-Dec-2011	genomic DNA	defective provirus;subtype: B	1	231	6L,87Q,98D,120S,148I,216S
PX241912	02018_C21	08-Dec-2011	genomic DNA	defective provirus;subtype: B	1	231	6L,27I,41T,87Q,91V,98D,120S,148V,208G,216S
PX241873	02018_R01	20-Mar-2003	genomic DNA	defective provirus;subtype: B	1	231	6L,83M,98D,120S,148I,216S
PX241874	02018_R02	20-Mar-2003	genomic DNA	defective provirus;subtype: B	1	231	6L,83M,98D,120S,148I,216S
PX241885	02018_R13	20-Mar-2003	genomic DNA	defective provirus;subtype: B	1	231	6L,83M,98D,120S,128K,148I,216S
PX241884	02018_R17	20-Mar-2003	genomic DNA	defective provirus;subtype: B	1	231	6L,83M,98D,120S,148I,216S
PX241877	02018_R19	20-Mar-2003	genomic DNA	defective provirus;subtype: B	1	231	6L,83M,98D,120S,148I,216S
PX241882	02018_R32	20-Mar-2003	genomic DNA	defective provirus;subtype: B	1	231	6L,83M,98D,120S,148I,216S
PX241880	02018_R42	20-Mar-2003	genomic DNA	defective provirus;subtype: B	1	231	6L,27L,83M,98D,111V,120S,148I,216S
PX241881	02018_R44	20-Mar-2003	genomic DNA	defective provirus;subtype: B	1	231	6L,27L,83M,98D,120S,148I,216S
PX241879	02018_R60	20-Mar-2003	genomic DNA	defective provirus;subtype: B	1	231	6L,83M,98D,120S,148I,216S
PX241906	02018_U118	06-Mar-2009	genomic DNA	defective provirus;subtype: B	1	223	6L,27I,41T,87Q,98D,120S,148V,216S,221L,223V
PX241894	02018_U60	20-Mar-2003	genomic DNA	defective provirus;subtype: B	1	231	6L,83M,98D,120S,148I,216S
PX241895	02018_U61	20-Mar-2003	genomic DNA	defective provirus;subtype: B	1	231	6L,83M,98D,120S,148I,216S
PX241896	02018_U62	20-Mar-2003	genomic DNA	defective provirus;subtype: B	1	231	6L,83M,91V,98D,120S,148I,216S
PX241897	02018_U65	20-Mar-2003	genomic DNA	defective provirus;subtype: B	1	231	6L,83M,98D,120S,148I,216S
PX241899	02018_U70	20-Mar-2003	genomic DNA	defective provirus;subtype: B	1	231	6L,23,80,83M,98D,120S,148I,216S
PX241900	02018_U72	20-Mar-2003	genomic DNA	defective provirus;subtype: B	1	231	6L,83M,98D,120S,148I,216S
PX241902	02018_U75	20-Mar-2003	genomic DNA	defective provirus;subtype: B	1	231	6L,23,61R,71K,80,83M,97K,98D,100K,120S,133,137R,148I,173K,184,216S,223R
PX241908	02018_U93	20-Mar-2003	genomic DNA	defective provirus;subtype: B	1	231	6L,83M,98D,120S,148I,216S
PX241955	02019_5_J12	20-Mar-2003	genomic DNA	defective provirus;subtype: B	1	231	6L,83M,98D,120S,148I,216S

Genbank References: capsid (p24)

Database

Resources

Team