<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Buggert (2012) Characterization of HIV-Specific CD4+ T Cell Responses against Peptides Selected with Broad Population and Pathogen Coverage PLoS ONE 7 (7), E39874 (2012) 1.95e-172 36 36 Mixed Plasma; PBMC Direct PCR HLA

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
JQ229726THS-10Sweden2010genomic DNAsubtype: B12316L,71D,83L,154K,178T,199KR,216AT
JQ229727THS-11Sweden2010genomic DNAsubtype: B12316A,33N,41A,68I,83L,91T,120S,124IV,132K,136M
JQ229728THS-12Sweden2009genomic DNAsubtype: C12316M,27I,41T,71D,83L,91V,96I,110N,116T,120S,128D,148V,169F,178T,191I,203R,208G
JQ229729THS-13Sweden2009genomic DNAsubtype: B12316L,27I,41T,83L,91V,116A,120S,128D,136M,148V,180D,199KR
JQ229730THS-14Sweden2009genomic DNAsubtype: B123183L,116N,148A
JQ229731THS-15Sweden2009genomic DNAsubtype: A1G12316A,14P,71D,83I,86P,87Q,92P,96I,98D,116R,120S,128D,148V,169F,171V,178T,187D,200N,208G,225S
JQ229732THS-16Sweden2009genomic DNAsubtype: B123183L,136IM,194S,208G
JQ229733THS-18Sweden2010genomic DNAsubtype: B12316L,31G,33N,50X,51X,52X,53X,54X,55X,56X,57X,58X,59X,60X,61X,62X,63X,64X,65X,66X,67X,68X,69X,70X,71X,72X,73X,74X,75X,76X,77X,78X,79X,80X,81X,82X,83X,84X,85X,86X,87X,88X,89X,90X,91X,92X,93X,94X,95X,96X,97X,98X,132K
JQ229734THS-19Sweden2010genomic DNAsubtype: B12316M,14AP,15L,16ST,41ST,78AG,83L,87HQ,91IV,120NS,136LM,225GS
JQ229735THS-2Sweden2009genomic DNAsubtype: B123183L,230I
JQ229736THS-20Sweden2009genomic DNAsubtype: B12316L,27I,83M,87Q,91V,98D,120S,124V,148V,183H
JQ229737THS-21Sweden2010genomic DNAsubtype: B12312A,3A,4A,5D,6E,83L,96LM,116AG,120H,128D,132G,148V,183S,225S,230I
JQ229738THS-22Sweden2010genomic DNAsubtype: B12316L,15L,41T,154K,194S
JQ229739THS-23Sweden2010genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,83L,84LP,92P,120GS,128D,129L,148V,178T,200S,207T,208G
JQ229740THS-24Sweden2010genomic DNAsubtype: B12316M,27I,41A,87HQ,91P,96LMV,116A,120HN,132K,136M,148IT,209AS,225GS
JQ229741THS-25Sweden2010genomic DNAsubtype: B12316L,83L,132G,183NT,225S
JQ229742THS-26Sweden2010genomic RNAsubtype: CRF21_A2D12316A,10W,33N,41T,54S,83L,86A,87Q,116A,120G,148V,187D,200V,203R,204G,208G,225S
JQ229743THS-27Sweden2010genomic RNAsubtype: CRF02_AG12316A,14S,15IM,27I,54M,58I,71D,79D,83T,92P,120S,124V,148V,169F,178T,200S,208G
JQ229744THS-28Sweden2010genomic RNAsubtype: CRF03_AB12316A,11I,14S,27I,45D,54M,58I,71D,83L,86A,87Q,91F,92P,115V,120S,128D,148V,169F,170R,178T,203R,207S,208G
JQ229745THS-29Sweden2010genomic RNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,48I,54M,58I,83L,92P,107I,111P,115L,118I,128D,148V,162K,200S,207T,208G,225S
JQ229746THS-3Sweden2010genomic DNAsubtype: B12316L,83L
JQ229747THS-30Sweden2010genomic RNAsubtype: CRF03_AB12316A,11I,14S,15M,27I,41ST,54M,58I,71D,86AV,87Q,91Y,92P,120S,124IV,135V,148AT,154K,169F,178T,180D,187D,203R,208G,225GS
JQ229748THS-31Sweden2009genomic RNAsubtype: B12316L,14P,15L,27I,83L,87Q,91V,110N,116A,120H,128D,148V
JQ229749THS-32Sweden2010genomic RNAsubtype: B12313M,6T,12Y,15L,83L,86P,87Q,110N,120S,136M,170R,194S,225S,230I
JQ229750THS-33Sweden2010genomic RNAsubtype: B12316L,27I,83L,120H,128D,132G,148V,178T,225S
JQ229751THS-34Sweden2010genomic RNAsubtype: B12316L,14P,15M,17A,27I,83L,120H,148V,154K,178T
JQ229752THS-35Sweden2010genomic RNAsubtype: G12316A,10P,11I,71D,83L,86Q,87Q,91F,92P,96I,116R,148V,154K,169F,178T,180D,187D,203R,208G,225S,230I
JQ229753THS-36Sweden2010genomic RNAsubtype: A112316A,11I,14P,15L,27IV,30R,31G,48IT,54M,58I,71D,83L,92P,111P,120G,123S,128D,148V,154K,168W,169F,178T,183G,200AS,203R,207S,208G
JQ229754THS-37Sweden2010genomic RNAsubtype: B12316L,27I,83L,86AV,87Q,91V,96V,98DE,116A,120H,148V,180D
JQ229755THS-38Sweden2010genomic RNAsubtype: B12316L,14P,15M,17A,83L,120S,128D,132T,148V,225S
JQ229756THS-4Sweden2010genomic DNAsubtype: B2623148P,83L
JQ229757THS-5Sweden2010genomic DNAsubtype: CRF01_AE12316A,14S,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
JQ229758THS-6Sweden2010genomic DNAsubtype: A212313L,6A,11T,12Y,14S,15L,16T,71D,83T,91N,92P,120S,148V,169F,178T,187D,200S,203R,208G
JQ229759THS-7Sweden2010genomic DNAsubtype: CRF01_AE12316T,14P,15L,31G,33N,54M,58I,91FI,92P,120NS,148V,178T,200S,207T,208G
JQ229760THS-8Sweden2010genomic DNAsubtype: B123183L,116N,148A,177T
JQ229761THS-9Sweden2010genomic DNAsubtype: CRF01_AE12316A,14P,15IL,31G,33N,54M,58I,79D,83AV,92P,128D,148V,178T,200S,207T,208G,225S

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