<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Han (2015) Development of an HIV-1 Subtype Panel in China: Isolation and Characterization of 30 HIV-1 Primary Strains Circulating in China PLoS ONE 10 (5), E0127696 (2015) 5.89e-158 27 27 Naive Cultured PBMC Direct PCR Molecular epidemiology

Download sequences

AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
KP178421BJ2006001China2006genomic DNAsubtype: B12316L,41T,83L,115V,120S,154K,180D
KP178422BJ2010001China2010genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,116A,128D,148V,178T,200S,207T,208G,225S
KP178423BJ2010002China2010genomic DNAsubtype: B12316L,14P,15IM,44A,83L,87Q,91V,96L,116A,120H,134V,148V,180D
KP178424BJ2010003China2010genomic DNAsubtype: CRF07_BC12316IL,14P,68I,71D,83L,86I,91N,92P,96I,116T,120G,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I
KP178425GD2005003China2005genomic DNAsubtype: B12316L,14S,15L,27I,83L,91V,96L,148V,180D,230I
KP178426GD2005004China2005genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,83L,92P,120G,123S,128D,148V,178T,200S,207T,208G,225S
KP178420GX2005002China2005genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
KP178427GX2005002China2005genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
KP178428GX2005016China2005genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,83I,92P,120S,128D,148I,178T,200S,207T,208G,225S
KP178446GX2006183China2006genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,78V,92P,120S,128D,148V,178T,200S,207T,208G,225S
KP178429GX2006185China2006genomic DNAsubtype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,61E,83L,92P,120S,128D,146K,148V,178T,180D,200S,208G,225S
KP178430HN2002024China2002genomic DNAsubtype: B12314R,6L,14P,71D,83L,86A,87Q,96I,110N,116A,154K,180D,212K
KP178431HN2010001China2010genomic DNAsubtype: B12316L,14P,44A,83L,148V,180D
KP178432HN2010002China2010genomic DNAsubtype: B12316L,14P,71D,79D,83L,154K,180D,225S,230I
KP178433HN2010003China2010genomic DNAsubtype: B12316L,27I,83L,91V,148V,230I
KP178434HN2010004China2010genomic DNAsubtype: B12316L,14P,83L,91V,96L,120G,123V,180D,225S,230I
KP178435HN2010005China2010genomic DNAsubtype: B12316L,14P,83L,91V,123A,180D,225GRS,230IV
KP178436NX2005012China2005genomic DNAsubtype: B12316L,14P,27I,44A,83L,91V,110N,148V,166DG,180D,200IT,203KT,211LV,225S,229IR,230I
KP178447SC2009001China2009genomic DNAsubtype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,96I,116A,128D,148V,178T,200S,207T,208G,225S
KP178437SD2006001China2006genomic DNAsubtype: B12316L,14P,80GW,83L,91V,161FS,180D,225S,230I
KP178439SD2013001China2013genomic DNAsubtype: CRF01_AE12313M,6A,15L,31G,33N,54M,58I,79D,83AT,87Q,92P,96I,116A,128D,148V,178T,200S,207T,208G,216V
KP178440SD2013005China2013genomic DNAsubtype: CRF07_BC12316L,14P,41T,68I,71D,83L,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211V,225S
KP178441SD2013008China2013genomic DNAsubtype: CRF01_AE12313I,6A,11A,15L,31G,33N,54M,58I,79D,83T,92P,96I,111I,116A,128D,148V,154K,178T,191I,200S,207T,208G,225S
KP178442SH2007052China2007genomic DNAsubtype: G12316A,71D,86P,87Q,92P,96I,116T,120S,148V,169F,178T,180D,187D,203R,208G,225S
KP178443SX2010001China2010genomic DNAsubtype: B12316L,14P,41T,75D,79D,83T,91V,96L,120S,180D,199R
KP178444XJ2010001China2010genomic DNAsubtype: CRF07_BC12316L,15L,68I,71D,83L,87HQ,91V,96I,116T,124V,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
KP178445ZJ2006001China2006genomic DNAsubtype: CRF07_BC123114P,68I,71D,83L,91V,116A,120A,123A,124V,128D,154K,169F,178T,180D,187D,200N,203R,208G,210S,211I,225S

Database

Resources

Team