<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Yang (2016) Genetic diversity and high proportion of intersubtype recombinants among HIV type 1-infected pregnant women in Kisumu, western Kenya AIDS Res. Hum. Retroviruses 20 (5), 565-574 (2004) 2.28e-151 36 36 Naive Plasma Direct PCR Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
AY49277400KE557Kenyagenomic RNAsubtype: D; serogroup: M2023133N,83L,91V,116A,120S,148V,178T,187D,200S,208G
AY49277500KE558Kenyagenomic RNAsubtype: D; serogroup: M2123127I,33N,71D,83L,86M,87Q,91L,96I,116A,120S,148V,180D,208Q
AY49277700KE561Kenyagenomic RNAsubtype: A/CRF01_AE/U recombinant; serogroup: M2023154M,58I,71D,83L,92P,110N,111I,116A,120G,124V,128D,148V,154K,169F,171V,178T,180D,200A,207T,208G
AY49278396KE006Kenyagenomic RNAsubtype: D; serogroup: M2023127I,41T,83L,87Q,91V,96I,116T,120S,148V,180D,199R,208G
AY49277696KE011Kenyagenomic RNAsubtype: AD recombinant; serogroup: M2123127I,54M,58I,83L,87Q,92P,96I,110N,120G,148V,154K
AY49275796KE139Kenyagenomic RNAsubtype: DU recombinant; serogroup: M1923119P,27I,52V,83L,91N,96I,116A,120G,148V,180D
AY49276696KE449Kenyagenomic RNAsubtype: A; serogroup: M1923119P,27I,54M,58I,71D,83L,91V,111P,116A,120G,128D,148V,153V,154K,169F,171I,178T,183G,200S,203R,207A,208G,225S
AY49275297KE004Kenyagenomic RNAsubtype: AD recombinant; serogroup: M1923119P,27I,30R,41L,54M,58I,69I,71D,83L,92P,111P,120S,128D,148V,154K,169F,171A,180D,183G,191I,200S,203R,204G,207A,208G
AY49278297KE018Kenyagenomic RNAsubtype: AD recombinant; serogroup: M1923119P,27I,71D,83L,91V,116A,123A,148V,154K,177G,180D,208G
AY49276897KE047Kenyagenomic RNAsubtype: D; serogroup: M1923119L,27I,83L,91N,116A,120S,148V,154K,183G,225S
AY49278797KE051Kenyagenomic RNAsubtype: ADU recombinant; serogroup: M2023183M,91V,120S,180D
AY49278597KE099Kenyagenomic RNAsubtype: G; serogroup: M2023171D,83L,86Q,87Q,92P,96I,98D,116R,120S,148V,169F,178T,183G,187D,203R,208G,225S
AY49278497KE100Kenyagenomic RNAsubtype: BD recombinant; serogroup: M1923119L,27I,83L,110N,120G,123A,148V,180D,225S
AY49275397KE104Kenyagenomic RNAsubtype: A; serogroup: M2023127I,58I,71D,83L,87Q,111P,115V,120S,148V,154K,169F,171A,178T,183G,187D,200S,208G
AY49275497KE114Kenyagenomic RNAsubtype: A2CD recombinant; serogroup: M1923119L,33N,83L,91V,116A,120S,148V,178T,183S,187D,200S,208G
AY49275597KE115Kenyagenomic RNAsubtype: AD recombinant; serogroup: M2023127I,71D,83L,91N,116A,120S,148V,154K,177G,180D,208G,230I
AY49275697KE136Kenyagenomic RNAsubtype: G; serogroup: M2023171D,83I,86P,87Q,92P,96I,110N,112S,116R,120G,148V,169F,178T,183G,187D,203R,208G,225S
AY49275897KE140Kenyagenomic RNAsubtype: D; serogroup: M1923119L,27I,50G,59I,83L,100K,116A,120G,128D,148V,154K,178T
AY49275997KE173Kenyagenomic RNAsubtype: A; serogroup: M2723127I,54M,58I,71D,83L,92P,111P,115L,120S,128D,148V,154K,169F,178T,180D,200S,203R,207T,208G
AY49276997KE486Kenyagenomic RNAsubtype: AC recombinant; serogroup: M1923119P,27I,54M,58I,71D,83L,91V,111P,115L,116Q,120G,123S,148V,154K,169F,178T,180D,200S,203R,207A,208G,210S,225S
AY49277097KE491Kenyagenomic RNAsubtype: D; serogroup: M2023133N,71D,86A,91V,110N,116A,120S,148V,187D,200S
AY49276098KE176Kenyagenomic RNAsubtype: D; serogroup: M1923119L,27I,83L,91A,98D,120S,148V,180D
AY49276198KE178Kenyagenomic RNAsubtype: A; serogroup: M1923119L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G
AY49278698KE234Kenyagenomic RNAsubtype: AD recombinant; serogroup: M1923119L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,183G,203R,207A,208G
AY49276298KE324Kenyagenomic RNAsubtype: AD recombinant; serogroup: M1923119L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G,225S,230I
AY49276398KE335Kenyagenomic RNAsubtype: AD recombinant; serogroup: M2023127I,54M,58I,71D,83L,92P,111P,120G,128D,148V,154K,169F,178T,183G,187D,200S,203R,208G
AY49276498KE384Kenyagenomic RNAsubtype: C; serogroup: M2023127I,33N,36I,41T,71D,83L,91A,96L,98D,116A,128D,132K,136M,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
AY49276798KE456Kenyagenomic RNAsubtype: ADG recombinant; serogroup: M2023127I,83L,148V,180D,225S,229K
AY49276599KE432Kenyagenomic RNAsubtype: A; serogroup: M2023127I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,171C,178T,183G,200S,203R,207T,208G
AY49277199KE504Kenyagenomic RNAsubtype: D; serogroup: M2023127I,33N,54S,58A,128D,148V,180D,208G,225S
AY49277299KE532Kenyagenomic RNAsubtype: ADG recombinant; serogroup: M2223127I,83I,110N,120S,148V,180D,225S
AY49277899KE570Kenyagenomic RNAsubtype: CD recombinant; serogroup: M2823183L,91V,148V,180D,208G
AY49277999KE577Kenyagenomic RNAsubtype: D; serogroup: M2023127I,83L,87Q,91V,98D,116A,120S,128D,148V,180D,225S
AY49278099KE579Kenyagenomic RNAsubtype: A; serogroup: M2023127I,58I,71D,83L,92P,111I,120G,128D,148V,154K,169F,178T,183G,203R,207S,208G
AY49278199KE591Kenyagenomic RNAsubtype: AD recombinant; serogroup: M3123144A,75D,83L,87Q,96I,116A,148V,180D,225S
AY49278899KE593Kenyagenomic RNAsubtype: D; serogroup: M2023127I,83L,91V,98D,110N,120S,148V,180D,225S

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