<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Pardons (2023) Potent latency reversal by tat RNA enables multi-omic analysis of the HIV-1 reservoir Unpublished 2.25e-153 67          

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
OQ596882STIPSEQ-MRC001-HG-MAA-B09-UBE22020genomic DNAdefective genome;subtype: B12316L,14P,41T,83L,120H,124V,180D,194S
OQ596885STIPSEQ-MRC004-HG-MAY-B03-DNAJ2021genomic DNAdefective genome;subtype: B12316M,14P,15L,16T,41T,91A,120S,194S
OQ596886STIPSEQ-MRC004-HG-MAY-B042021genomic DNAsubtype: B12316M,14P,15L,16T,41T,91T,120S,194S
OQ596887STIPSEQ-MRC004-HG-MAY-B08-SGK22021genomic DNAdefective genome;subtype: B12316M,14P,15L,16T,41T,91T,120S,194S
OQ596888STIPSEQ-MRC004-HG-MAY-C02-Chr12021genomic DNAsubtype: B12316M,14P,15L,16T,41T,91T,120S,194S
OQ596889STIPSEQ-MRC004-HG-MAY-C04-PEX52021genomic DNAdefective genome;subtype: B12316M,14P,15L,16T,41T,91T,120S,194S
OQ596890STIPSEQ-MRC004-HG-MAY-C06-Chr12021genomic DNAdefective genome;subtype: B12316M,14P,15L,16T,41T,91T,120S,194S
OQ596891STIPSEQ-MRC004-HG-MAY-C072021genomic DNAsubtype: B12316M,14P,15L,16T,41T,91T,120S,194S
OQ596892STIPSEQ-MRC004-HG-MAY-D03-ZSWI2021genomic DNAdefective genome;subtype: B12316M,14P,15L,16T,41T,70N,91T,120S,194S,227E
OQ596893STIPSEQ-MRC004-HG-MAY-D04-Chr12021genomic DNAdefective genome;subtype: B12316M,14P,15L,16T,41T,91T,120S,194S
OQ596895STIPSEQ-MRC004-HG-MAY-E04-EIF22021genomic DNAdefective genome;subtype: B12316M,14P,15L,16T,41T,91A,120S,194S
OQ596896STIPSEQ-MRC004-HG-MAY-E052021genomic DNAdefective genome;subtype: B2323123P,41T,91T,120S,194S
OQ596897STIPSEQ-MRC004-HG-MAZ-B032021genomic DNAdefective genome;subtype: B12316M,14P,15L,16T,41T,91T,120S,194S
OQ596898STIPSEQ-MRC004-HG-MAZ-B04-USP12021genomic DNAdefective genome;subtype: B12316M,14P,15L,16T,41T,91T,120S,194S
OQ596899STIPSEQ-MRC004-HG-MAZ-B06-DYM2021genomic DNAdefective genome;subtype: B12316M,14P,15L,16T,41T,91T,120S,194S
OQ596900STIPSEQ-MRC004-HG-MAZ-B082021genomic DNAdefective genome;subtype: B12316M,14P,15L,16T,41T,91T,120S,194S
OQ596901STIPSEQ-MRC004-HG-MAZ-B09-CARD2021genomic DNAdefective genome;subtype: B12316M,14P,15L,16T,41T,91T,120S,194S
OQ596903STIPSEQ-MRC004-HG-MAZ-C04-EIF22021genomic DNAdefective genome;subtype: B12316M,14P,15L,16T,41T,91A,120S,194S
OQ596904STIPSEQ-MRC004-HG-MAZ-C05-Chr72021genomic DNAdefective genome;subtype: B12316M,14P,15L,16T,41T,91T,120S,194S
OQ596905STIPSEQ-MRC004-HG-MAZ-C09-WASF2021genomic DNAdefective genome;subtype: B12316M,14P,15L,16T,41T,91T,120S,194S
OQ596906STIPSEQ-MRC004-HG-MAZ-D03-PEX52021genomic DNAdefective genome;subtype: B12316M,14P,15L,16T,41T,91T,120S,194S
OQ596910STIPSEQ-MRC004-HG-MCA-B03-Chr82021genomic DNAdefective genome;subtype: B12316M,14P,15L,16T,41T,91T,120S,194S
OQ596911STIPSEQ-MRC004-HG-MCA-B062021genomic DNAdefective genome;subtype: B12316M,14P,15L,16T,41T,91T,120S,194S
OQ596912STIPSEQ-MRC004-HG-MCA-C02-Chr72021genomic DNAdefective genome;subtype: B12316M,14P,15L,16T,41T,91T,120S,194S
OQ596913STIPSEQ-MRC004-HG-MCA-C04-Chr72021genomic DNAdefective genome;subtype: B12316M,14P,15L,16T,41T,91T,120S,194S
OQ596914STIPSEQ-MRC004-HG-MCA-C09-ZSWI2021genomic DNAdefective genome;subtype: B12316M,14P,15L,16T,41T,70N,91T,120S,194S,227E
OQ596915STIPSEQ-MRC004-HG-MCA-D03-RPTO2021genomic DNAsubtype: B12316M,14P,15L,16T,41T,91T,117*,120S,194S
OQ596916STIPSEQ-MRC004-HG-MCA-D04-CCR52021genomic DNAdefective genome;subtype: B12316M,14P,15L,16T,41T,91A,120S,194S
OQ596917STIPSEQ-MRC004-HG-MCA-D072021genomic DNAdefective genome;subtype: B12316M,14P,15L,16T,41T,91T,120S,194S
OQ596918STIPSEQ-MRC004-HG-MCA-D09-DNAJ2021genomic DNAdefective genome;subtype: B12316M,14P,15L,16T,41T,91A,120S,194S
OQ596919STIPSEQ-MRC008-HG-MBJ-B07-RNF12021genomic DNAdefective genome;subtype: B12316L,15L,36I,41T,83M,86A,87Q,91V,98D,110N,120S,148V,180D
OQ596920STIPSEQ-MRC008-HG-MBJ-C02-TAOK2021genomic DNAsubtype: B12316L,15L,36I,41T,83M,86A,87Q,91V,98D,110N,120S,148V,180D
OQ596922STIPSEQ-MRC008-HG-MBJ-C06-KANS2021genomic DNAsubtype: B12316L,15L,36I,41T,83M,86A,87Q,91V,98D,110N,120S,148V,180D
OQ596924STIPSEQ-MRC008-HG-MBJ-C082021genomic DNAdefective genome;subtype: B12316L,15L,36I,41T,83M,86A,87Q,91V,98D,110N,120S,148V,180D
OQ596925STIPSEQ-MRC008-HG-MBJ-C09-Chr22021genomic DNAsubtype: B12316L,15L,36I,41T,83M,86A,87Q,91V,98D,110N,120S,148V,180D
OQ596926STIPSEQ-MRC008-HG-MBJ-D02-Chr22021genomic DNAsubtype: B12316L,15L,36I,41T,83M,86A,87Q,91V,98D,110N,120S,148V,180D
OQ596927STIPSEQ-MRC008-HG-MBJ-D04-SCML2021genomic DNAdefective genome;subtype: B12316L,15L,36I,41T,83M,86A,87Q,91V,98D,110N,120S,148V,180D
OQ596928STIPSEQ-MRC008-HG-MBJ-D052021genomic DNAsubtype: B12316L,15L,36I,41T,83M,86A,87Q,91V,98D,110N,120S,148V,180D
OQ596929STIPSEQ-MRC008-HG-MBJ-D09-CTC12021genomic DNAdefective genome;subtype: B12316L,15L,36I,41T,83M,86A,87Q,91V,98D,110N,120S,148V,180D
OQ596930STIPSEQ-MRC008-HG-MBJ-E04-TAOK2021genomic DNAsubtype: B12316L,15L,36I,41T,83M,86A,87Q,91V,98D,110N,120S,148V,180D
OQ596932STIPSEQ-MRC008-HG-MBK-B04-SCML2021genomic DNAdefective genome;subtype: B12316L,15L,36I,41T,83M,86A,87Q,91V,98D,110N,120S,148V,180D
OQ596933STIPSEQ-MRC008-HG-MCB-B04-SCML2021genomic DNAdefective genome;subtype: B12316L,15L,36I,41T,83M,86A,87Q,91V,98D,110N,120S,148V,180D
OQ596934STIPSEQ-MRC008-HG-MCB-B07-Chr22021genomic DNAsubtype: B12316L,15L,36I,41T,83M,86A,87Q,91V,98D,110N,120S,148V,180D
OQ596935STIPSEQ-MRC008-HG-MCB-B08-KIF12021genomic DNAsubtype: B12316L,15L,36I,41T,83M,86A,87Q,91V,98D,110N,120S,148V,180D
OQ596936STIPSEQ-MRC008-HG-MCB-D02-MBNL2021genomic DNAdefective genome;subtype: B12316L,15L,36I,41T,83M,86A,87Q,91V,98D,110N,120S,148V,180D
OQ596937STIPSEQ-MRC008-HG-MCB-D05-URI12021genomic DNAdefective genome;subtype: B12316L,15L,36I,41T,83M,86A,87Q,91V,98D,110N,120S,148V,180D
OQ596938STIPSEQ-MRC008-HG-MCB-D06-LOC12021genomic DNAdefective genome;subtype: B12316L,15L,36I,41T,83M,86A,87Q,91V,98D,110N,120S,148V,180D
OQ596939STIPSEQ-MRC015-HG-MAK-E04-Chr12021genomic DNAdefective genome;subtype: B12316M,27I,36I,79D,83L,148V,229K
OQ596940STIPSEQ-MRC015-HG-MAK-F07-SNTB2021genomic DNAdefective genome;subtype: B12316M,27I,36I,79D,83L,148V
OQ596941STIPSEQ-MRC015-HG-MAK-F08-SNTB2021genomic DNAdefective genome;subtype: B12316M,27I,36I,79D,83L,148V
OQ596942STIPSEQ-MRC015-HG-MAS-D06-SNTB2021genomic DNAdefective genome;subtype: B12316M,27I,36I,79D,83L,148V
OQ596943STIPSEQ-MRC021-MDW-B06-Chr1-142021genomic DNAdefective genome;subtype: B12316A,7R,14P,16T,83L,87Q,91V,96I,110N,116A,120H
OQ596944STIPSEQ-MRC021-MDW-B07-ZNF6092021genomic DNAdefective genome;subtype: B12316A,14P,16T,83L,87Q,91V,96I,110N,116A,120H
OQ596945STIPSEQ-MRC021-MDW-B08-DCAF72021genomic DNAdefective genome;subtype: B12316A,14P,16T,83L,87Q,91V,96I,110N,116A,120H
OQ596946STIPSEQ-MRC021-MDW-C03-ADRBK12021genomic DNAdefective genome;subtype: B12316A,14P,16T,83L,87Q,91V,96I,110N,116A,120H
OQ596947STIPSEQ-MRC021-MDW-C06-MGAT4A2021genomic DNAsubtype: B12316A,14P,16T,83L,87Q,91V,96I,110N,116A,120H
OQ596948STIPSEQ-MRC021-MDW-C08-ZNF2772021genomic DNAdefective genome;subtype: B12316A,14P,16T,83L,87Q,91V,96I,110N,116A,120H
OQ596949STIPSEQ-MRC021-MDW-C09-Chr13-42021genomic DNAdefective genome;subtype: B123114P,15L,83L,110N,120H
OQ596950STIPSEQ-MRC021-MDW-D072021genomic DNAdefective genome;subtype: B3023130R,83L,87Q,91V,110N,120H
OQ596952STIPSEQ-MRC021-MDW-F05-SLC6A162021genomic DNAdefective genome;subtype: B12316A,14P,16T,83L,87Q,91V,96I,110N,116A,120H
OQ596954STIPSEQ-MRC021-MDW-F07-RABGAP12021genomic DNAdefective genome;subtype: B12316A,14P,16T,83L,87Q,91V,96I,110N,116A,120H
OQ596955STIPSEQ-MRC021-MDW-G032021genomic DNAdefective genome;subtype: B12316A,14P,16T,83L,87Q,91V,96I,110N,116A,120H
OQ596956STIPSEQ-MRC021-MDW-G04-LOC10052021genomic DNAdefective genome;subtype: B123114P,15L,83L,110N,120H
OQ596957STIPSEQ-MRC021-MDW-G07-PTEN2021genomic DNAsubtype: B12316M,14P,15M,16T,83L,87Q,91V,96I,110N,116A,120H
OQ596958STIPSEQ-MRC021-MDW-G082021genomic DNAsubtype: B12316A,14P,16T,83L,87Q,91V,96I,110N,116A,120H
OQ596959STIPSEQ-STAR10-HG-MDC-C03-LINC2016genomic DNAdefective genome;subtype: B12316M,15L,41T,83L,116A,160S
OQ596960STIPSEQ-STAR10-HG-MDC-D06-STAT2016genomic DNAsubtype: B12316M,15L,41T,83L,116A,160S,207Q,208G

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