<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Kinloch (2023) HIV reservoirs are dominated by genetically younger and clonally enriched proviruses mBio (2023) In press 3.29e-151 70          

Download sequences

AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
OR483970BC003_proviral_378_Intact22-Jun-2016genomic DNAsubtype: B12314R,6L,14S,15L,27I,83L,87Q,110N,116A,148V,180D
OR483971BC003_proviral_385_Intact22-Jun-2016genomic DNAsubtype: B12314R,6L,15L,27I,83L,87Q,110N,116A,148V,180D
OR483972BC003_proviral_389_Intact22-Jun-2016genomic DNAsubtype: B12314R,6L,15L,83L,87Q,110N,116A,148V,180D
OR483973BC003_proviral_394_Intact22-Jun-2016genomic DNAsubtype: B12316L,15L,27I,83L,110N,116A,148V,180D
OR483974BC003_proviral_401_Intact22-Jun-2016genomic DNAsubtype: B12316L,15L,27I,83L,110N,116A,148V,180D
OR483975BC003_proviral_404_Intact22-Jun-2016genomic DNAsubtype: B12316L,15L,27I,83L,110N,116A,148V,180D
OR483976BC003_proviral_413_Intact22-Jun-2016genomic DNAsubtype: B12314R,6L,15L,83L,110N,116A,148V,180D
OR483977BC003_proviral_429_Intact22-Jun-2016genomic DNAsubtype: B12316L,15L,27I,83L,110N,116A,148V,180D
OR483978BC003_proviral_497_Intact22-Jun-2016genomic DNAsubtype: B12314R,6L,15L,27I,83L,87Q,110N,116A,148V,180D
OR483979BC003_proviral_528_Intact22-Jun-2016genomic DNAsubtype: B12316L,15L,27I,83L,110N,116A,148V,180D
OR483980BC003_proviral_597_Intact22-Jun-2016genomic DNAsubtype: B12314R,6L,15L,27I,83L,87Q,110N,116A,148V,180D
OR483981BC003_proviral_600_Intact22-Jun-2016genomic DNAsubtype: B12314R,6L,15L,27I,83L,87Q,110N,116A,148V,180D
OR483982BC003_proviral_636_Intact22-Jun-2016genomic DNAsubtype: B12314R,6L,15L,27I,83L,110N,116A,148V,180D
OR483983BC003_proviral_637_Intact22-Jun-2016genomic DNAsubtype: B12314R,6L,15L,27I,83L,87Q,110N,116A,148V,180D
OR483984BC003_proviral_660_Intact22-Jun-2016genomic DNAsubtype: B12314R,6L,15L,27I,83L,87Q,110N,116A,148V,180D
OR502359BC003_QVOA_00222-Jun-2016genomic RNAsubtype: B12314R,6L,15L,27I,83L,87Q,110N,116A,148V,180D
OR483985BC004_proviral_294_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,210N,225S
OR484004BC004_proviral_305_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,210N,225S
OR484005BC004_proviral_306_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,210N,225S
OR484006BC004_proviral_308_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,210N,225S
OR484007BC004_proviral_309_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,210N,225S
OR483986BC004_proviral_347_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,225S
OR483987BC004_proviral_348_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,225S
OR483988BC004_proviral_349_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,210N,225S
OR483989BC004_proviral_350_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,225S
OR483990BC004_proviral_351_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,225S
OR483991BC004_proviral_353_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,210N,225S
OR483992BC004_proviral_354_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,210N,225S
OR483993BC004_proviral_357_Intact07-Jul-2016genomic DNAsubtype: B12316L,15L,27I,41T,83L,91V,148A,154K,208G,225S
OR483994BC004_proviral_360_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,210N,225S
OR484008BC004_proviral_395_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,87Q,91V,120S,148A,154K,208G,210N,225S
OR483995BC004_proviral_396_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,210N,225S
OR483996BC004_proviral_397_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,87Q,91V,120S,148A,154K,208G,210N,225S
OR483997BC004_proviral_398_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,210N,225S
OR483998BC004_proviral_399_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,87Q,91V,120S,148A,154K,208G,210N,225S
OR483999BC004_proviral_400_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,210N,225S
OR484009BC004_proviral_401_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,87Q,91V,120S,148A,154K,208G,210N,225S
OR484010BC004_proviral_402_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,87Q,91V,120S,148A,154K,208G,210N,225S
OR484011BC004_proviral_403_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,87Q,91V,120S,148A,154K,208G,210N,225S
OR484000BC004_proviral_404_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,210N,225S
OR484017BC004_proviral_411_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,225S
OR484018BC004_proviral_412_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,225S
OR484019BC004_proviral_413_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,225S
OR484012BC004_proviral_414_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,225S
OR484020BC004_proviral_415_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,225S
OR484013BC004_proviral_416_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,225S
OR484001BC004_proviral_417_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,225S
OR484021BC004_proviral_418_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,225S
OR484014BC004_proviral_419_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,225S
OR484015BC004_proviral_420_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,225S
OR484002BC004_proviral_421_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,225S
OR484022BC004_proviral_422_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,225S
OR484016BC004_proviral_423_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,225S
OR484023BC004_proviral_429_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,87Q,91V,120S,148A,154K,208G,210N,225S
OR484024BC004_proviral_430_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,87Q,91V,120S,148A,154K,208G,210N,225S
OR484025BC004_proviral_431_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,87Q,91V,120S,148A,154K,208G,210N,225S
OR484026BC004_proviral_432_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,87Q,91V,120S,148A,154K,208G,210N,225S
OR484027BC004_proviral_433_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,87Q,91V,120S,148A,154K,208G,210N,225S
OR484028BC004_proviral_434_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,87Q,91V,120S,148A,154K,208G,210N,225S
OR484029BC004_proviral_435_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,87Q,91V,120S,148A,154K,208G,210N,225S
OR484030BC004_proviral_436_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,87Q,91V,120S,148A,154K,208G,210N,225S
OR484003BC004_proviral_437_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,87Q,91V,120S,148A,154K,208G,210N,225S
OR484031BC004_proviral_438_Intact07-Jul-2016genomic DNAsubtype: B12316L,27I,41T,83L,87Q,91V,120S,148A,154K,208G,210N,225S
OR502360BC004_QVOA_00106-Jul-2016genomic RNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,210N,225S
OR502361BC004_QVOA_00206-Jul-2016genomic RNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,225S
OR502362BC004_QVOA_00306-Jul-2016genomic RNAsubtype: B12316L,27I,41T,83L,91V,148A,154K,208G,225S
OR502363BC004_QVOA_00406-Jul-2016genomic RNAsubtype: B12316L,27I,41T,83L,87Q,91V,120S,148A,154K,208G,210N,225S
OR502364BC004_QVOA_00506-Jul-2016genomic RNAsubtype: B12316L,27I,41T,83L,91V,120S,148A,154K,208G,210N,225S
OR502365BC004_QVOA_00606-Jul-2016genomic RNAsubtype: B12316L,27I,41T,83L,87Q,91V,120S,148A,154K,208G,210N,225S
OR502366BC004_QVOA_00706-Jul-2016genomic RNAsubtype: B12316L,27I,41T,83L,87Q,91V,120S,148A,154K,208G,210N,225S

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