Genbank References: capsid (p24)

Authors	Title	Citation	E-value	# in Gb	#Pts	ART	Source	Cloning	StudyType
Grant (2020)	Pervasive and non-random recombination in near full-length HIV genomes from Uganda	Virus Evol 6 (1), veaa004 (2020)	8.16e-154	1409	1409	Naive	Plasma	NGS	Molecular epidemiology

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Accession	IsolateName	Country	Coll Date	Clone	MolType	Source	Note	FirstAA	LastAA	MutList
MN788781	PG14-UG000003	Uganda	2013		genomic RNA		subtype: D	1	231	6S,14P,27I,50H,83L,91H,116A,120G,129L,148V,171V,180D,225S
MN789085	PG14-UG000007	Uganda	2013		genomic RNA		subtype: D	1	231	6L,14T,15M,27I,41A,54S,83L,87Q,110N,116A,120S,148V,225S
MN788787	PG14-UG000008	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,11I,14P,15L,27I,54M,58V,71D,83L,92P,110N,111T,115L,116A,120G,123A,128D,148V,154K,169F,178T,187D,200S,208G,210S,225S
MN789600	PG14-UG000012	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,10A,11I,14P,15L,26A,27I,30R,31G,54M,58I,71D,79D,83L,87Q,92P,96L,111T,116A,148V,154K,169F,171V,178T,183G,200S,203R,207S,208G
MN790159	PG14-UG000013	Uganda	2013		genomic RNA		subtype: A	1	231	6A,15V,27I,54M,58I,71D,83L,92P,116A,120S,124V,128D,131R,148V,154K,169F,178T,180D,191I,203R,207A,208G
MN789139	PG14-UG000014	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,15L,27I,30R,31G,48A,54M,58I,71D,83L,92P,111P,120G,128D,148V,154K,169F,179S,180D,183S,187D,200S,203R,208G
MN789297	PG14-UG000015	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,15M,27I,54M,58I,71D,83L,92P,111P,120G,128D,148V,154K,169F,178T,183G,191I,203R,204S,207A,208G
MN789468	PG14-UG000016	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,10P,15V,27I,31G,33N,58I,71D,79D,83L,111P,115V,116A,120A,128D,148V,163E,169F,171V,180D,187D,191I,200S,207T,208G,225S
MN789536	PG14-UG000017	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,29D,41T,83I,87Q,96I,110N,116T,120S,148V,180D,210S,225S
MN789513	PG14-UG000021	Uganda	2013		genomic RNA		subtype: D	1	231	6L,14P,27I,54V,79D,83L,91M,110S,116A,120S,148V,180D,225S
MN788835	PG14-UG000023	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,27I,30R,54M,58I,71D,83L,92P,96I,120G,128D,148V,169F,180D,183G,200S,207T,208G,210S
MN788991	PG14-UG000025	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11I,14S,15M,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,153V,154K,169F,171I,178T,183G,191I,203R,204S,207A,208G
MN789080	PG14-UG000026	Uganda	2013		genomic RNA		subtype: D	1	231	6L,27I,83L,148V,180D,225S
MN789591	PG14-UG000027	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,14G,15L,27I,30R,31G,45D,54M,58I,71D,79D,83L,92P,111T,120G,128D,148V,154K,169F,178T,183G,191I,200S,207S,208G,210S
MN789791	PG14-UG000028	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,50S,83L,86P,91Q,96I,116T,128D,148V,180D,183Q,188S,225S
MN789151	PG14-UG000029	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,14H,15M,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,153V,154K,169F,171I,178T,183G,191I,203R,204S,207A,208G
MN789073	PG14-UG000030	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,15L,27I,45D,83L,87Q,91V,98D,120S,148V,180D
MN789407	PG14-UG000031	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,14P,27I,41T,83L,91V,116A,120S,128D,148V,180D,208G,225S
MN789833	PG14-UG000032	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,12L,14N,15L,27I,50T,54M,58I,83L,92P,111P,120S,128D,148V,154K,169F,178T,180D,187D,190I,200S,203R,208G
MN790050	PG14-UG000033	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,14S,15L,27I,54M,58I,71D,83L,92P,111P,120G,128D,148V,154K,169F,171V,180D,187D,200S,203R,207A,208G
MN789922	PG14-UG000034	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,15M,27I,29D,44A,54M,58I,71D,83I,92P,96I,111V,120G,128D,148V,154K,169F,178T,183G,200S,203R,207T,208G
MN789928	PG14-UG000035	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,15L,27I,41T,50S,54S,70R,77S,83L,87Q,91V,96I,98D,111P,120G,128D,148V,154K,169F,171V,180D,187D,200S,208G,225S
MN789529	PG14-UG000038	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,11I,15L,27I,54M,58V,71D,83L,92P,111T,115L,116A,120G,123A,128D,148V,153V,154K,169F,171I,178T,183G,187D,200N,208G,225S
MN790065	PG14-UG000039	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,41I,83L,87Q,91V,110N,120S,124T,148V,180D,203R
MN789197	PG14-UG000040	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,15L,27I,41T,83T,86Q,87Q,91V,96L,98D,110N,120S,148V,180D
MN790187	PG14-UG000044	Uganda	2013		genomic RNA		subtype: D	1	231	6L,15L,27I,83M,112K,116D,148V,178T,225S
MN789252	PG14-UG000046	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,15L,27I,33N,71D,83L,87Q,91V,120S,148V,154K,180D
MN788894	PG14-UG000047	Uganda	2013		genomic RNA		subtype: D	1	231	6L,27I,41T,83L,91N,110S,120S,148V,178T,225S,229K
MN789959	PG14-UG000050	Uganda	2013		genomic RNA		subtype: AC	1	231	4H,6A,11T,12Y,15L,27I,30R,31G,48V,54M,58I,71D,83L,92P,111P,116A,120G,123A,128D,148V,154K,169F,178T,180D,200S,203R,207A,208G,225A
MN789892	PG14-UG000051	Uganda	2013		genomic RNA		subtype: D	1	231	6L,15V,27I,41T,54S,83L,87Q,110S,120S,148V,180D,208G
MN789098	PG14-UG000052	Uganda	2013		genomic RNA		subtype: D	1	231	6L,27I,41T,71D,83I,91V,110N,120S,148V,154K,177C,178T,180D,199R,216S
MN789055	PG14-UG000053	Uganda	2013		genomic RNA		subtype: A1	1	231	2V,6A,11I,14N,15L,27I,31G,33N,45D,50G,58I,71D,83T,92P,111P,115L,116Q,120G,128D,148V,165G,169F,171V,178T,200S,203R,207S,208G,210S,211I,225S
MN789391	PG14-UG000059	Uganda	2013		genomic RNA		subtype: D	1	231	6L,14P,15L,27I,41I,83L,91V,110N,113D,120S,124V,135V,148V,208G
MN789054	PG14-UG000061	Uganda	2013		genomic RNA		subtype: D	1	231	6L,14P,15F,27I,50S,54M,68I,83L,91V,110N,120S,128D,148V,154K,180D,194S,208S,225S
MN789753	PG14-UG000062	Uganda	2013		genomic RNA		subtype: ACD	1	231	6L,27I,41T,59I,81N,83L,100T,110S,120S,148V,180D,208G,225S,230I
MN789527	PG14-UG000063	Uganda	2013		genomic RNA		subtype: D	1	231	6A,15L,27I,31G,33N,36I,41T,45A,50D,75D,83L,87Q,110N,116A,120S,148V,154K,178T,194S,200A,203R,208G,225S
MN789675	PG14-UG000064	Uganda	2013		genomic RNA		subtype: AC	1	231	6A,11I,14P,15L,27I,31G,33N,48I,54M,58I,71D,83L,91V,92P,111P,120G,123A,128D,148V,154K,169F,171V,180D,187D,191I,200S,203R,207S,208G,225S
MN789433	PG14-UG000068	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11T,14P,15L,27I,30R,31G,54M,58I,71D,83L,86A,87Q,92P,96I,111P,116A,120G,128D,129L,148V,154K,169F,180D,200S,203R,207S,208G,210S
MN789806	PG14-UG000076	Uganda	2013		genomic RNA		subtype: B	1	231	6L,10L,15L,27I,41T,50S,54S,79D,83L,91Q,120S,148V,154K,180D,183T,205M,208G,225S
MN789557	PG14-UG000079	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,29D,41T,83L,87Q,91V,110N,116A,120S,148V,180D,225S
MN789423	PG14-UG000081	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,27I,54L,79D,91V,116A,148V,154K,171V,180D,207T,208G,225S
MN789864	PG14-UG000083	Uganda	2013		genomic RNA		subtype: D	1	231	6L,11I,27I,44A,48A,54V,83Q,91V,112A,116Q,120S,148V,154K,208G,225S
MN789650	PG14-UG000086	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11T,15V,16T,27I,30R,31G,48I,58I,71D,92P,96L,118I,120G,128D,148V,169F,187D,200S,203R,208G
MN789508	PG14-UG000087	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,116N,120S,148V,180D
MN789388	PG14-UG000091	Uganda	2013		genomic RNA		subtype: ACD	1	231	6L,15L,27I,36I,41T,83L,87Q,91V,98D,116A,148V,180D,207S,208G,225S
MN789338	PG14-UG000093	Uganda	2013		genomic RNA		subtype: D	1	231	6M,41T,50G,59I,83T,91V,116A,120S,148V,178T,187D,199R,200N,208G,225S
MN790173	PG14-UG000094	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11I,15V,27I,30R,31G,54M,58I,71D,83L,87Q,92P,96I,111P,116A,120G,128D,129V,148V,154K,169F,178T,180D,200S,203R,207S,208G,210S
MN789997	PG14-UG000096	Uganda	2013		genomic RNA		subtype: D	1	231	6L,14S,15L,27I,29D,41T,83L,91V,96I,116T,120S,148V,154K,180D,183S,208G,225S
MN789739	PG14-UG000097	Uganda	2013		genomic RNA		subtype: A1	1	231	3I,6A,11T,15L,27I,30R,31G,48I,54M,58I,71D,79D,83I,92P,110N,111A,116A,118I,120G,123A,148V,154K,169F,180D,183G,187D,200S,203R,207S,208G,225S
MN790010	PG14-UG000100	Uganda	2013		genomic RNA		subtype: A	1	231	6V,12Y,15V,27I,30R,54M,58I,71D,83L,91V,92P,111P,120S,128D,148V,154K,169F,171A,178T,183G,191I,200S,201L,207T,208G,225S
MN788872	PG14-UG000102	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,11I,14P,15L,27I,30R,31G,54M,58I,71D,83L,92P,111P,120G,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G
MN789341	PG14-UG000103	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,41T,83L,87Q,91V,98D,116N,120S,148V,154K,180D,208G,210S
MN790089	PG14-UG000105	Uganda	2013		genomic RNA		subtype: AD	1	231	2V,6A,10W,11T,14N,15L,27I,50G,58V,71D,83L,92P,96I,111P,115V,116A,120G,128D,148V,169F,178T,180D,200S,203R,207A,208G,225S
MN789069	PG14-UG000106	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,83L,148V,178T
MN789157	PG14-UG000107	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,11I,14S,15L,27I,30R,31G,54M,58I,83L,91V,111P,116A,128D,148V,154K,169F,171A,178T,180D,187D,200S,207S,208G
MN789248	PG14-UG000108	Uganda	2013		genomic RNA		subtype: D	1	231	6L,14P,27I,29D,41T,50A,83L,87Q,91V,96L,111P,115L,120S,128D,135V,148V,180D,208G,210S
MN789074	PG14-UG000110	Uganda	2014		genomic RNA		subtype: ACD	1	231	6A,9A,27I,41T,71D,91V,116A,120S,148V,154K,169F,171C,178T,180D,187D,207Q,208G
MN789877	PG14-UG000111	Uganda	2014		genomic RNA		subtype: C	1	231	6L,14P,15L,41T,58A,71D,83T,96V,110N,116A,128D,148V,154K,169F,178T,180D,200A,203R,208G,225S
MN789827	PG14-UG000112	Uganda	2014		genomic RNA		subtype: D	1	231	6L,50S,54S,58A,83L,91T,120S,128D,148V,180D,225S
MN789114	PG14-UG000113	Uganda	2014		genomic RNA		subtype: D	1	231	6L,14P,16T,27I,41T,116A,120S,124V,148V,178T,225A
MN789546	PG14-UG000116	Uganda	2014		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,29D,41T,83L,87Q,110N,120S,148V,180D,210S,225S
MN789940	PG14-UG000117	Uganda	2014		genomic RNA		subtype: A1	1	231	6A,12Y,14T,15F,27I,31G,54M,58I,71D,83I,92P,111P,115V,120S,128D,136M,148V,154K,169F,178T,200S,203R,207A,208G,225S
MN789504	PG14-UG000118	Uganda	2014		genomic RNA		subtype: CD	1	231	6L,14P,27I,31G,33N,41T,71D,83T,91V,116A,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MN790128	PG14-UG000119	Uganda	2014		genomic RNA		subtype: A	1	231	2V,6A,11I,14S,15L,27I,54M,58I,71D,92P,96I,111P,115V,116A,120G,128D,148V,154K,169F,178T,180D,200S,203R,207A,208G
MN790030	PG14-UG000123	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,11I,14P,15L,27I,31G,33N,48I,54M,58I,71D,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171V,178T,187D,199R,200A,203R,207T,208G,225S
MN789606	PG14-UG000125	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,11I,14P,15L,17A,27I,30R,54M,58I,71D,83I,111I,112T,116A,120G,128D,148V,154K,169F,178T,183G,203R,204G,207A,208G,210S
MN789697	PG14-UG000126	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,9H,11S,15V,27I,31G,36I,50G,58I,71D,83L,92P,111T,128D,148V,169F,170R,183G,194S,203R,207S,208G,225S
MN789434	PG14-UG000127	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,11I,14N,15L,27I,54M,58I,71D,83L,92P,96L,111P,120A,128D,146C,148V,154K,169F,180D,191I,200S,207T,208G,210S
MN789485	PG14-UG000128	Uganda	2013		genomic RNA		subtype: D	1	231	6L,15L,27I,41T,91V,98D,116N,120A,148V,180D,199R,208G
MN788876	PG14-UG000129	Uganda	2013		genomic RNA		subtype: ACD	1	231	6L,11I,27I,50G,83L,91V,96I,110S,116T,120S,128D,148V,180D
MN788832	PG14-UG000130	Uganda	2013		genomic RNA		subtype: ACD	1	231	6A,11T,14N,15L,27I,54M,58V,71D,79D,83T,86L,111P,116A,120G,148V,154K,169F,171V,178T,183G,200S,207T,208G,225S
MN789279	PG14-UG000132	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,41T,44A,83L,116A,120S,148V,180D
MN789237	PG14-UG000134	Uganda	2013		genomic RNA		subtype: AC	1	231	6P,27I,41T,71D,83I,91V,116A,120G,128D,148V,154K,169F,171V,178T,180D,187D,203R,208G
MN789258	PG14-UG000137	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11M,12L,14S,15L,31G,54M,58I,71D,83L,87Q,92P,96L,111P,115L,120S,128D,148V,153V,154K,169F,171I,178T,183G,200S,203R,207S,208G
MN789941	PG14-UG000138	Uganda	2013		genomic RNA		subtype: A1	1	231	2V,6A,11I,14S,31G,48V,54M,58I,59I,71D,83L,91V,96L,111I,116A,120T,128D,148V,154K,169F,178T,183G,200S,207T,208G
MN789911	PG14-UG000139	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,15V,27I,54M,58I,71D,83L,92P,111P,120G,128D,148V,153V,154K,169F,171V,178T,183G,203R,208G
MN789998	PG14-UG000140	Uganda	2013		genomic RNA		subtype: D	1	231	6L,27I,83L,86A,87Q,91V,98D,120S,148V,178T,180D,225S
MN789386	PG14-UG000141	Uganda	2013		genomic RNA		subtype: CD	1	231	6A,27I,31N,41T,71D,83L,115V,116A,120G,148V,169F,178T,180D,187D,203R,208G
MN789499	PG14-UG000142	Uganda	2013		genomic RNA		subtype: D	1	231	6L,27I,36I,41T,83L,87Q,110N,115V,116A,120S,124V,148V,180D,225S
MN788929	PG14-UG000146	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11I,15L,26A,27I,30R,31G,54M,58I,71D,79D,83L,87Q,91V,96L,111P,116A,120H,148V,153V,154K,169F,171I,178T,183G,200S,203R,207S,208G,229K,230I
MN789308	PG14-UG000147	Uganda	2013		genomic RNA		subtype: A	1	231	2V,6A,9H,11I,15L,26A,27I,30R,31G,50G,54M,58I,71D,83L,92P,111P,120G,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G,225S
MN790164	PG14-UG000152	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,14P,15V,27I,44A,54M,58I,71D,79D,83L,87Q,96I,111I,116T,120G,148V,154K,169F,171V,178T,183G,203R,207T,208G
MN789512	PG14-UG000153	Uganda	2013		genomic RNA		subtype: ADG	1	231	6A,11I,15V,27I,54M,58I,71D,83L,87Q,92P,111P,120S,128D,148V,154K,169F,178T,187D,203R,208G
MN789668	PG14-UG000155	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11I,15V,27I,54M,58I,71D,83L,86I,87Q,91V,96I,111I,116A,120S,128D,148V,154K,169F,171A,178T,183G,200S,203R,207T,208G,225S
MN789598	PG14-UG000156	Uganda	2013		genomic RNA		subtype: AG	1	231	6A,11T,15L,27I,31G,45D,48I,54M,58I,68I,71D,83A,92P,116A,118I,120G,128D,148V,169F,171C,180D,190M,199R,200A,203R,207T,208G,225S
MN789825	PG14-UG000157	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,15V,27I,54M,58I,71D,83L,91V,111P,116A,120G,128D,148V,154K,169F,171C,180D,183G,200S,203R,207T,208G
MN789021	PG14-UG000158	Uganda	2013		genomic RNA		subtype: AD	1	231	2L,6L,11S,12Y,14N,15L,27I,41A,83L,91V,116A,120S,123A,132K,136M,148V,180D,183T,225S
MN790154	PG14-UG000161	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,11I,14T,15L,27I,36I,48A,54M,58I,71D,79D,83L,91V,96I,111I,116A,128D,148V,153V,154K,169F,171I,178T,183G,200S,203R,207T,208G,210S
MN789817	PG14-UG000163	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11I,14P,15L,26A,27I,30R,48I,54M,58I,71D,83L,91V,92P,111P,116A,120G,128D,148V,154K,169F,171A,178T,180D,183G,200S,203R,207S,208G
MN789225	PG14-UG000164	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,11I,15V,26A,27I,30R,31G,54M,58I,71D,79D,87Q,91M,92P,96L,98D,111I,116A,128D,148V,154K,169F,171C,180D,183T,187D,199R,200S,203R,207S,208G,210S
MN789488	PG14-UG000165	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,33N,41T,54S,83L,91V,116Q,120S,148V,180D,210S,225S
MN790049	PG14-UG000166	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,29D,41T,83L,91N,110N,116A,120G,148V,180D
MN789255	PG14-UG000168	Uganda	2013		genomic RNA		subtype: CD	1	231	6A,14P,27I,31N,41T,71D,110N,116A,120S,148V,154K,162K,169F,178T,180D,187D,203R,208G,210S,225S
MN789896	PG14-UG000169	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11I,15L,27I,30R,31G,54M,58I,71D,83L,86A,87Q,91F,92P,96I,111I,120H,128D,148V,154K,169F,180D,183S,187D,200S,207S,208G,210S
MN789243	PG14-UG000170	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,12Y,14S,15L,27I,83L,111P,115L,116A,120S,124V,148V,180D,225S
MN789666	PG14-UG000172	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,14P,15L,16T,27I,83L,116A,120S,148V,178T
MN789370	PG14-UG000173	Uganda	2013		genomic RNA		subtype: ADG	1	231	6A,11I,71D,83T,86P,87Q,92P,96I,98D,116R,120S,148V,165G,166N,169F,178T,187D,203R,208G,225S
MN788902	PG14-UG000178	Uganda	2013		genomic RNA		subtype: AD	1	231	6M,27I,83L,116T,120S,148V,180D,225S
MN789273	PG14-UG000180	Uganda	2013		genomic RNA		subtype: AD	1	231	3I,6L,27I,50G,83L,91V,120S,148V,180D,208G
MN788753	PG14-UG000181	Uganda	2013		genomic RNA		subtype: CD	1	231	6L,14P,15L,41I,83L,91Q,98D,110N,120S,124V,135V,148V,180D
MN789071	PG14-UG000184	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,29D,41T,83L,91V,110N,120G,148V,180D
MN788789	PG14-UG000185	Uganda	2014		genomic RNA		subtype: A	1	231	6A,11I,14N,15L,27I,54M,58I,71D,83L,87Q,92P,111P,120S,128D,148V,154K,169F,178T,183G,187D,200S,203R,207A,208G
MN789713	PG14-UG000186	Uganda	2014		genomic RNA		subtype: ACD	1	231	6A,11I,12Y,14P,15M,27I,29D,31S,50T,54M,58I,59I,91V,111T,120S,128D,148V,180D,225S
MN788799	PG14-UG000188	Uganda	2014		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,41T,83L,87P,96I,98D,100T,110N,116R,120S,148V,170R,180D,203R,208G
MN789115	PG14-UG000189	Uganda	2014		genomic RNA		subtype: ACD	1	231	2V,6A,11I,14P,15F,27I,30R,31G,54M,58I,71D,91V,98D,111P,115V,116A,128D,148V,154K,169F,171V,183H,187D,191I,200S,207S,208G
MN788826	PG14-UG000191	Uganda	2014		genomic RNA		subtype: AD	1	231	2V,6A,11I,12Y,14T,15M,31G,54M,58I,71D,83L,92P,111P,120G,124V,128D,148V,154K,169F,178T,183G,200N,203R,207A,208G
MN789475	PG14-UG000192	Uganda	2014		genomic RNA		subtype: AD	1	231	6A,11I,14S,15L,31G,54M,58I,71D,83L,91A,92P,96I,107I,111P,118I,120G,128D,148V,154K,162K,169F,178T,183S,187D,200S,203R,207S,208G,230I
MN789874	PG14-UG000193	Uganda	2014		genomic RNA		subtype: AD	1	231	6A,11T,15L,27I,30R,54M,58V,71D,92P,96I,111T,116A,120S,148V,154K,169F,171V,180D,183G,200S,210S,225S
MN789580	PG14-UG000195	Uganda	2014		genomic RNA		subtype: AD	1	231	6L,14N,15L,27I,41T,83L,116A,120S,148V,180D,208G,225S
MN789431	PG14-UG000197	Uganda	2014		genomic RNA		subtype: A	1	231	6A,10P,13S,14P,15M,27I,30R,31G,44A,47T,54M,58I,59I,71D,78V,83L,86A,92P,110N,111I,116A,120G,124V,128D,148V,154K,169F,180D,200S,207T,208G,210S
MN789063	PG14-UG000198	Uganda	2014		genomic RNA		subtype: AD	1	231	6D,14P,41L,78S,83L,110S,120S,124V,148V,154K,180D,183T,200L,204G,207S,208G,225S
MN789052	PG14-UG000199	Uganda	2014		genomic RNA		subtype: AD	1	231	6L,15L,27I,41T,83L,91N,92P,94N,116A,120S,148V,180D,208G
MN789175	PG14-UG000201	Uganda	2014		genomic RNA		subtype: AD	1	231	6L,14S,27I,87P,91V,98D,120S,124V,139H,148V,154K,180D,208Q,225S
MN789538	PG14-UG000202	Uganda	2014		genomic RNA		subtype: AD	1	231	6A,11I,15L,26A,27I,30R,31G,54M,58I,71D,79D,83L,111P,116A,148V,154K,169F,178T,183S,200S,203R,207A,208G
MN789453	PG14-UG000203	Uganda	2014		genomic RNA		subtype: ADG	1	231	6L,27I,33N,83L,120S,123A,148V,180D,199R,225S
MN790162	PG14-UG000204	Uganda	2014		genomic RNA		subtype: D	1	231	6L,11I,27I,41T,71D,83L,87Q,91V,110S,120S,148V,170R,180D,208G
MN789184	PG14-UG000206	Uganda	2014		genomic RNA		subtype: D	1	231	6L,14P,27I,83L,91P,96L,107S,110N,116A,124V,148V,180D,183T,225S
MN789033	PG14-UG000207	Uganda	2014		genomic RNA		subtype: A	1	231	6A,9R,12Y,14G,15P,26A,27I,30R,31G,54M,58I,59I,71D,83L,87Q,92P,96L,111T,116Q,128D,148V,169F,178T,183G,191I,200S,203R,208G,225S
MN788864	PG14-UG000208	Uganda	2014		genomic RNA		subtype: AD	1	231	6A,11I,12F,15L,27I,30R,54M,58I,71D,83L,87Q,111P,115V,116A,120G,128D,148V,154K,169F,171A,180D,183H,187D,200S,203R,204G,207Q,208G
MN789564	PG14-UG000209	Uganda	2009		genomic RNA		subtype: D	1	231	6L,14N,15L,27I,31G,33N,41T,54S,58V,83L,91A,96L,115V,120S,124V,135V,148V,180D,225S
MN789860	PG14-UG000212	Uganda	2014		genomic RNA		subtype: D	1	231	6L,15L,27I,41T,83L,91A,96L,115V,120S,148V,194S
MN788772	PG14-UG000213	Uganda	2014		genomic RNA		subtype: A1	1	231	2V,6A,10L,11I,14P,15L,31G,33N,54M,58I,71D,83I,111T,116A,120S,128D,148V,169F,171V,178T,180D,200S,207T,208G,210S
MN789790	PG14-UG000215	Uganda	2014		genomic RNA		subtype: D	1	231	6L,14S,15L,27I,45D,83L,96I,116T,148V
MN789914	PG14-UG000216	Uganda	2014		genomic RNA		subtype: AD	1	231	6A,11I,12L,14T,15L,27I,54M,58I,71D,83L,92P,96I,111P,115L,116A,118I,120S,148V,154K,169F,178T,200S,203R,207T,208G,225S
MN789857	PG14-UG000217	Uganda	2014		genomic RNA		subtype: AD	1	231	6L,27I,83T,91V,110S,148V,180D,225S
MN788974	PG14-UG000218	Uganda	2014		genomic RNA		subtype: AD	1	231	2V,14P,15L,27I,41T,50S,59I,79D,83T,87Q,91V,96I,110N,111I,116A,120S,124V,148V,178T,180D,203R,208G,225A
MN789307	PG14-UG000221	Uganda	2014		genomic RNA		subtype: A	1	231	10P,11T,12Y,15V,27I,54M,58I,71D,83L,92P,111P,120G,128D,148V,154K,169F,178T,183G,203R,207T,208G
MN789754	PG14-UG000222	Uganda	2014		genomic RNA		subtype: A	1	231	6A,11T,15V,27I,31G,48I,58I,71D,83L,92P,111A,120S,128D,148V,154K,169F,178T,180D,203R,207S,208G,211I
MN789223	PG14-UG000224	Uganda	2009		genomic RNA		subtype: A	1	231	6A,14G,15V,27I,30R,47C,54M,58I,71D,83L,92P,120S,128D,148V,169F,171A,180D,183G,190M,191I,200S,207A,208G
MN790080	PG14-UG000225	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11T,14V,15L,27I,29D,31S,36I,47C,50H,54M,58V,71D,83L,92P,96V,110N,115M,116A,120G,123A,124V,128D,131R,148V,153V,154K,169F,171I,178T,180D,200A,207T,208G
MN789286	PG14-UG000227	Uganda	2013		genomic RNA		subtype: D	1	231	6L,15L,27I,83L,148V,180D,190M
MN789121	PG14-UG000228	Uganda	2013		genomic RNA		subtype: D	1	231	6L,15L,41T,83L,116A,120S,148V,154K,183G,208G
MN789549	PG14-UG000229	Uganda	2013		genomic RNA		subtype: C	1	231	6L,14P,15L,27I,36I,41T,83L,96L,116A,124V,128D,148V,169F,178T,200I,203R,204G,208G,225S
MN789988	PG14-UG000230	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,50N,83L,96I,111I,116A,118I,120G,128D,148V,154K,169F,178T,183G,203R,208G
MN790033	PG14-UG000231	Uganda	2013		genomic RNA		subtype: D	1	231	6L,27I,83L,91V,116A,120S,148V,180D,225S
MN790107	PG14-UG000233	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,15V,27I,50G,54M,58I,71D,83T,91V,96I,111I,116A,131R,148V,154K,169F,180D,187D,200S,203R,208G
MN789215	PG14-UG000234	Uganda	2013		genomic RNA		subtype: D	1	231	6L,27I,41T,50S,83L,91V,96I,116T,120S,128D,148V,154K,178T,200H,225S
MN789217	PG14-UG000235	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11I,14G,15V,31G,54M,58I,71D,83L,92P,111I,120S,128D,148V,154K,169F,178T,183G,203R,207A,208G
MN789331	PG14-UG000236	Uganda	2013		genomic RNA		subtype: ACD	1	231	6L,14N,27I,83L,116A,128D,148V,180D,208G,225S
MN789761	PG14-UG000238	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11I,14G,15L,26A,27I,30R,31G,33N,54M,58I,71D,79D,83L,87Q,91L,92P,96L,111P,116A,124F,148V,154K,169F,178T,183G,191I,200S,203R,207S,208G,210S
MN790151	PG14-UG000239	Uganda	2013		genomic RNA		subtype: D	1	231	6L,11I,27I,41T,83L,116N,120S,148V,154K,171V,180D,207T,208G
MN788855	PG14-UG000240	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,14S,27I,116A,120S,121T,148V,154K,177G,208G,225S
MN789492	PG14-UG000241	Uganda	2013		genomic RNA		subtype: D	1	231	6L,15L,27I,83L,87P,98D,120H,148V,208Q,225S,230I
MN790135	PG14-UG000242	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,11M,12Y,15L,26A,27I,30R,31G,36I,48A,54M,58I,71D,83L,91V,111T,116A,128D,148I,153V,154K,169F,178T,183G,187D,200S,203R,208G,225A
MN790197	PG14-UG000243	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11I,13S,14P,15F,27I,30R,31G,54M,58I,71D,83I,86A,91V,92Q,111A,120S,148V,154K,169F,178T,191S,200S,203R,208G,225A
MN788983	PG14-UG000244	Uganda	2013		genomic RNA		subtype: AD	1	231	6P,11I,15L,27I,30R,31G,54M,58I,71D,83L,96I,111I,128D,148V,154K,169F,178T,180D,191I,200S,207S,208G,210S,225S
MN790091	PG14-UG000246	Uganda	2013		genomic RNA		subtype: AD	1	231	6P,11I,14P,15L,27I,30R,31G,54M,58I,71D,83L,92P,96I,111I,113D,128D,148V,154K,169F,178T,180D,191I,200S,207S,208G,210S,225S
MN789569	PG14-UG000247	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11I,13S,14P,15L,27I,30R,31G,54M,58I,71D,83L,87Q,92P,96I,111P,116A,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G
MN789458	PG14-UG000248	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11T,15M,27I,30R,31G,50G,54M,58I,71D,83L,92P,111T,116A,128D,148V,154K,169F,178T,183G,187D,200S,203R,207S,208G,225A
MN789906	PG14-UG000249	Uganda	2013		genomic RNA		subtype: A	1	231	6A,15V,27I,54M,58I,71D,83I,87Q,92P,120S,124V,128D,131R,148V,154K,169F,178T,180D,200N,203R,207A,208G,225S
MN789721	PG14-UG000251	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,15L,27I,54M,58I,71D,83L,86A,91V,111P,116A,120G,128D,148V,154K,169F,171V,178T,183G,191I,200S,207T,208G
MN789412	PG14-UG000252	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,10P,11I,15M,27I,54M,58I,71D,83L,86A,91V,111T,116A,120G,128D,131R,148V,154K,169F,171V,178T,183G,191I,200S,203R,207T,208G,210S
MN789936	PG14-UG000253	Uganda	2013		genomic RNA		subtype: C	1	231	6L,14T,15L,27I,41T,50G,71D,83T,87Q,91V,96I,116T,120S,148V,154K,169F,178T,187D,200A,203R,208G,210S
MN788762	PG14-UG000254	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,50S,54S,83M,87Q,91V,111I,120S,148V,180D,203R,225S
MN789324	PG14-UG000255	Uganda	2013		genomic RNA		subtype: D	1	231	6L,15L,27I,83L,87P,91V,98D,120H,148V,208Q,225S,230I
MN789852	PG14-UG000262	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,11T,15L,27I,30R,31G,54M,58I,71D,86A,110N,111I,128D,148V,154K,169F,178T,183G,187Q,200S,203R,207T,208G,225S
MN789963	PG14-UG000265	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,41T,50S,54S,83L,86Q,87Q,91V,96L,98D,110S,120S,131R,135V,148V,180D,225S
MN789467	PG14-UG000266	Uganda	2013		genomic RNA		subtype: D	1	231	6L,15L,27I,83L,91V,116A,148V,178T,208G,213D
MN790178	PG14-UG000268	Uganda	2013		genomic RNA		subtype: A	1	231	6A,9H,11I,14P,15F,16T,27I,30R,31G,54M,58I,71D,83L,87Q,92P,96L,111T,120S,128D,148V,154K,169F,178T,183G,191I,200S,207S,208G,225S
MN789392	PG14-UG000270	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11I,15L,27I,31S,54M,58I,71D,83L,87Q,92P,96L,111T,120G,148V,153V,154K,169F,171V,178T,183G,200S,203R,207A,208G,210S,225S
MN789962	PG14-UG000271	Uganda	2013		genomic RNA		subtype: CG	1	231	6L,10W,11A,14P,15L,17A,31N,49X,50X,54I,59I,71X,72X,73X,74X,75X,76X,77X,78X,79X,80X,81X,82X,83X,84X,85X,86X,87X,88X,89X,90X,91X,92APST,96I,97E,98N,99X,100*EKQ,116A,120S,124V,128D,148V,154K,169F,178T,187D,194S,208G,210S,225S
MN789748	PG14-UG000274	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,15V,27I,30R,31G,54M,58I,71D,83L,87Q,88V,92P,96L,111T,128D,148V,154K,169F,177G,178T,180D,200S,203R,207T,208G,210S
MN789840	PG14-UG000275	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,11I,15L,27I,54M,58I,71D,83M,91V,111S,116A,120G,148V,169F,178T,180D,191I,207S,208G
MN789079	PG14-UG000276	Uganda	2013		genomic RNA		subtype: AD	1	231	54S,58A,83L,91V,120S,126I,148V,154K,180D
MN789604	PG14-UG000277	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,10W,11T,12P,14S,15L,27I,41T,54M,58I,71D,83M,87Q,96L,111I,120S,154K,169F,178T,183G,191I,200S,203R,207T,208G,225S
MN788820	PG14-UG000278	Uganda	2013		genomic RNA		subtype: D	1	231	6L,15L,27I,41T,50S,83L,91T,110N,120S,148V,180D,208G,225S
MN789384	PG14-UG000279	Uganda	2013		genomic RNA		subtype: ACD	1	231	6A,11I,15V,31G,54M,58I,71D,83I,111I,128D,148V,154K,169F,178T,180D,200S,203R,207S,208G
MN789935	PG14-UG000281	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,12P,14P,15L,16A,27I,30R,38S,47C,48I,54M,58V,71D,83L,91V,92P,96L,111P,118I,120S,128D,148V,154K,169F,178T,180D,200S,203R,208G,225S
MN789674	PG14-UG000282	Uganda	2013		genomic RNA		subtype: D	1	231	2V,6L,27I,50T,87Q,91V,120S,148V,180D,225S
MN789723	PG14-UG000283	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,11I,15V,27I,29D,33N,48I,58I,59I,71D,83L,87Q,96I,110N,111A,116A,120G,128D,131R,148V,154K,169F,177S,178T,187D,191T,200S,203R,208G
MN788920	PG14-UG000284	Uganda	2013		genomic RNA		subtype: ACD	1	231	6A,11I,12Y,14S,15L,27I,29D,31T,54M,58V,71D,83T,91V,111P,116A,120A,128D,148V,154K,169F,178T,180D,187D,191I,200N,203R,208G,210S,211I
MN789558	PG14-UG000285	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,83L,87Q,91V,96I,98D,120H,148V,154K,180D,205M,208G,225S
MN790012	PG14-UG000286	Uganda	2013		genomic RNA		subtype: D	1	231	6L,27I,41T,83L,116N,120S,148V,154K,171V,180D,183S,207T,208G
MN788801	PG14-UG000287	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,83L,87Q,91H,92P,116A,148V,180D,225S
MN789174	PG14-UG000290	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,41T,50N,71D,83I,87Q,91V,98D,120S,124V,148V,154K,170R,180D,225S
MN788865	PG14-UG000294	Uganda	2013		genomic RNA		subtype: AD	1	231	2V,6A,11T,12Y,14S,27I,54M,58I,71D,83A,92P,111T,120G,148V,153V,154K,169F,171I,178T,180D,187D,203R,208G
MN789036	PG14-UG000296	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,50G,83L,87Q,91V,96L,115V,120S,148V,180D,183K,225S
MN789797	PG14-UG000297	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11I,14N,15L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,180D,183Q,200S,203R,204G,207T,208G
MN788972	PG14-UG000298	Uganda	2013		genomic RNA		subtype: C	1	231	6L,27I,36I,41T,71D,83L,87Q,91F,92P,93A,96L,116A,120H,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
MN788814	PG14-UG000299	Uganda	2013		genomic RNA		subtype: D	1	231	6L,27I,83L,93S,110S,116T,120S,148V,225S,230I
MN790075	PG14-UG000300	Uganda	2013		genomic RNA		subtype: D	1	231	6V,10H,11I,14P,17A,27I,30R,79D,83L,110N,116A,120G,148V,154K,180D,210S
MN789902	PG14-UG000301	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,15V,27I,30R,54M,58I,71D,83L,91V,92P,111P,120S,128D,148V,154K,169F,180D,183G,187D,200S,203R,207A,208G,225S,230I
MN789299	PG14-UG000302	Uganda	2013		genomic RNA		subtype: D	1	231	6L,14P,15L,27I,75D,79D,83L,91V,96I,116A,148V,180D,183T,208Q
MN788746	PG14-UG000306	Uganda	2013		genomic RNA		subtype: D	1	231	6L,15L,27I,33N,71D,83L,86Q,91V,116A,120S,124V,148V,170R,180D,208G,210S,225S
MN789975	PG14-UG000307	Uganda	2013		genomic RNA		subtype: D	1	231	6L,15L,27I,50A,83L,115V,116A,120S,128D,148V,180D,225S
MN789581	PG14-UG000308	Uganda	2013		genomic RNA		subtype: AD	1	231	6V,15L,33N,41T,54S,58V,83L,116Q,120S,148I,183H,225S
MN789901	PG14-UG000309	Uganda	2013		genomic RNA		subtype: D	1	231	6L,27I,41T,75D,83L,91N,116A,120S,148V,180D,225S
MN789131	PG14-UG000310	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,41T,83L,86A,87Q,91V,96I,98D,116T,120T,124V,148V,180D,210S
MN789235	PG14-UG000312	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,11I,14N,15L,27I,54M,58I,71D,83L,111P,116A,120G,123A,128D,148V,154K,169F,178T,180D,187D,200S,203R,207T,208G
MN790133	PG14-UG000313	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,15L,27I,83L,86A,87Q,92P,112A,116A,120S,124V,148V,180D,208G
MN789190	PG14-UG000314	Uganda	2013		genomic RNA		subtype: D	1	231	6L,11M,14P,15L,16T,31N,41T,50A,59I,79D,83L,91A,100K,116A,120S,124V,148V,171V,180D
MN788930	PG14-UG000315	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,10P,12Y,15L,27I,30R,54M,58I,71D,83L,87P,91V,96L,98D,111P,116A,120R,128D,148V,154K,169F,171A,180D,183G,203R,207A,208G
MN788785	PG14-UG000317	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11I,14N,15L,27I,54M,58I,71D,83L,111P,116A,120S,128D,148V,154K,169F,171V,178T,180D,203R,204G,207T,208G
MN788808	PG14-UG000319	Uganda	2013		genomic RNA		subtype: ADG	1	231	6L,15L,27I,41T,83L,87Q,91V,116A,120S,148V,180D,183T,208G,213D
MN789756	PG14-UG000322	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,54V,79D,83T,87P,98D,116A,120S,128D,148V,154K,180D,225S
MN789244	PG14-UG000324	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,11I,12Y,45D,54M,58I,71D,83L,87Q,92P,96L,111P,120S,148V,153V,169F,171I,178T,183G,187D,191I,200S,207T,208G,230I
MN788751	PG14-UG000325	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11I,12Y,15L,27I,30R,31G,48L,54M,58I,71D,83L,86T,91V,92Q,111P,120G,128D,148V,154K,169F,178T,180D,200S,203R,207S,208G,210S
MN789111	PG14-UG000327	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,11I,15M,27I,31G,52I,54V,56M,58V,71D,83M,87Q,96I,111I,116A,120S,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G,225S
MN789832	PG14-UG000328	Uganda	2013		genomic RNA		subtype: AG	1	231	6A,13N,14P,15L,26A,27I,30R,36I,54M,58V,71D,79D,83L,96I,111P,115V,116A,120G,148V,154K,169F,178T,183G,191I,200S,203R,207S,208G,225A
MN789066	PG14-UG000329	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,29D,41T,83L,87Q,91V,96R,98D,116D,120S,121T,148V,154K,180D,183S,208G,210S,225S
MN789076	PG14-UG000330	Uganda	2013		genomic RNA		subtype: C	1	231	6L,14P,15L,27I,41T,50S,54S,71D,83L,87Q,91V,96I,110N,115V,116A,120S,128D,148V,169F,174T,180D,187D,203R,208G,210S,225S
MN789506	PG14-UG000331	Uganda	2013		genomic RNA		subtype: A1	1	231	2V,6A,14P,15L,27I,33N,48A,54M,58V,71D,83L,92P,111V,120G,128D,131R,148V,154K,169F,178T,183G,200S,203R,208G,225S
MN790176	PG14-UG000335	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,9H,11I,14S,15V,27I,31G,54V,58I,71D,83L,87Q,92P,111P,115V,120S,128D,148V,154K,169F,178T,183G,187D,200S,207S,208G,225S
MN789419	PG14-UG000338	Uganda	2013		genomic RNA		subtype: CD	1	231	6A,27I,41T,50S,83L,87Q,91V,96L,116A,120S,128D,148V,154K,169F,171A,178T,180D,187D,207T,208G,225S
MN788875	PG14-UG000340	Uganda	2013		genomic RNA		subtype: AD	1	231	2V,3I,6A,11I,14G,15L,27I,47S,48I,50F,54M,58V,71D,83L,92P,111P,118T,120G,128D,131R,148V,154K,169F,171V,180D,183G,187D,200S,203R,208G,225S
MN789023	PG14-UG000341	Uganda	2013		genomic RNA		subtype: D	1	231	6L,14P,15L,27I,44A,50G,68I,83L,91N,120S,121T,148V,154K,169F,171V,177G,178T,194S,208G,225S
MN789964	PG14-UG000343	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,11T,14H,15M,27I,31G,54M,58I,71D,111I,116A,128D,148V,154K,169F,180D,187D,200S,207T,208G
MN789567	PG14-UG000344	Uganda	2013		genomic RNA		subtype: D	1	231	6L,27I,83L,116A,120S,148V,180D,225S
MN789760	PG14-UG000346	Uganda	2013		genomic RNA		subtype: ACD	1	231	6A,11T,15L,26A,27I,30R,31G,36I,54M,58I,83L,86A,87Q,92P,96I,111P,115V,116V,120G,128D,148V,153V,154K,169F,171V,178T,183G,190M,203R,204G,207Q,208G
MN789110	PG14-UG000347	Uganda	2009		genomic RNA		subtype: AD	1	231	6A,11I,12F,15L,27I,30R,54M,58I,71D,83L,91V,111P,115V,116A,120G,128D,148V,154K,169F,180D,183G,191I,200S,203R,207A,208G,225S
MN789781	PG14-UG000349	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,15M,27I,41T,54M,58I,71D,83S,86A,87Q,91V,92P,96L,98D,120G,128D,148V,169F,178T,200S,203R,208G
MN788756	PG14-UG000353	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11I,14C,15L,27I,29D,54M,58I,71D,83L,91V,110N,111T,116A,120G,131R,148V,153V,154K,169F,171I,178T,183G,200S,207S,208G,210S
MN789531	PG14-UG000355	Uganda	2014		genomic RNA		subtype: D	1	231	6L,14P,15L,27I,83L,96I,110N,115V,116A,148V,225S
MN789520	PG14-UG000357	Uganda	2014		genomic RNA		subtype: AD	1	231	6L,14P,27I,83L,110N,116A,148V,180D,225S,230I
MN789541	PG14-UG000359	Uganda	2014		genomic RNA		subtype: AD	1	231	6A,14S,15L,27I,29D,33N,50S,54M,58V,71D,83L,87Q,91V,96I,98D,111P,116A,120G,122Q,128D,131R,148V,154K,169F,178T,191I,203R,204G,207S,208G,210S
MN788999	PG14-UG000361	Uganda	2014		genomic RNA		subtype: ACD	1	231	6L,27I,41T,91V,110N,120A,148V,180D,199R
MN790056	PG14-UG000362	Uganda	2014		genomic RNA		subtype: D	1	231	6L,27I,83L,91V,112A,120S,123A,148V,171V,180D,208G,225S
MN789133	PG14-UG000364	Uganda	2014		genomic RNA		subtype: AD	1	231	3L,6V,11I,14P,15F,26T,27I,30R,31G,48L,54M,58I,71D,83L,92Q,111P,118I,148V,154K,169F,178T,183G,203R,208G,210S
MN789340	PG14-UG000366	Uganda	2014		genomic RNA		subtype: ADG	1	231	6A,11M,14P,15L,26A,27I,30R,31G,54M,58I,71D,83L,87Q,91V,92Q,96L,111P,116A,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G
MN788778	PG14-UG000369	Uganda	2014		genomic RNA		subtype: D	1	231	6L,14G,15L,27I,29D,83T,110N,116T,120S,148V,180D
MN788956	PG14-UG000371	Uganda	2014		genomic RNA		subtype: D	1	231	6L,27I,52I,83L,91N,120S,134V,148V,178T,208G
MN790121	PG14-UG000372	Uganda	2014		genomic RNA		subtype: A1	1	231	2V,6A,11I,14T,15F,27I,31G,33N,54M,58I,71D,83L,94N,96L,111P,116A,120Q,128D,148V,154K,169F,171C,178T,183G,200S,203R,207S,208G
MN789333	PG14-UG000374	Uganda	2014		genomic RNA		subtype: CD	1	231	6L,14P,31G,33N,83I,91P,115V,116A,120G,123A,128D,148V,180D,208G,210S
MN788951	PG14-UG000377	Uganda	2014		genomic RNA		subtype: A	1	231	6A,14V,15V,27I,54S,58V,71D,83L,96I,111I,116T,120S,128D,148V,154K,169F,177G,178T,190M,191I,200S,203R,208G
MN790174	PG14-UG000379	Uganda	2014		genomic RNA		subtype: C	1	231	14P,27I,41T,71D,83L,87Q,91V,116A,118I,120G,124V,128D,136M,148V,169F,178T,187D,203R,208G,210S
MN789956	PG14-UG000380	Uganda	2014		genomic RNA		subtype: AD	1	231	6A,15V,27I,30R,54M,58I,83L,92P,120G,124V,128D,148V,154K,177G,180D,225S
MN790144	PG14-UG000381	Uganda	2014		genomic RNA		subtype: A1	1	231	6A,14S,15V,27I,54M,58I,71D,83L,86I,111P,116A,120G,128D,148V,154K,169F,178T,183G,191I,200S,203R,207A,208G
MN790131	PG14-UG000382	Uganda	2014		genomic RNA		subtype: D	1	231	6L,14P,15L,31G,33K,83L,87Q,91Y,92P,96I,110N,115V,116A,120H,148V,180D,208G,210S,225S
MN790092	PG14-UG000383	Uganda	2014		genomic RNA		subtype: AD	1	231	6L,27I,41T,67K,83L,112A,115V,116A,120S,124V,148V,180D,225S
MN789202	PG14-UG000385	Uganda	2009		genomic RNA		subtype: D	1	231	6M,15L,27I,29D,41T,83M,87Q,96I,98D,116T,148V,154K,208G,225A
MN788788	PG14-UG000386	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,27I,41T,83L,110S,120S,148V,180D,191I,194S,208G
MN790057	PG14-UG000389	Uganda	2009		genomic RNA		subtype: AC	1	231	6L,14P,15M,27I,41T,56F,71D,83L,87Q,91V,116A,120S,128D,148V,154K,169F,178T,180D,200N,203R,207Q,208G,225S
MN789694	PG14-UG000391	Uganda	2009		genomic RNA		subtype: D	1	231	6L,14P,15L,27I,41T,50T,91N,116A,120S,135V,148V,154K,180D,208G
MN789993	PG14-UG000392	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,29D,41T,83L,91V,116A,120S,148V,180D,208G,225S
MN789636	PG14-UG000394	Uganda	2009		genomic RNA		subtype: D	1	231	6L,11I,15L,27I,31G,83L,86P,87Q,91V,96L,98D,111T,120S,148V,180D,203R,208G,210S,225S
MN789669	PG14-UG000395	Uganda	2009		genomic RNA		subtype: D	1	231	6L,27I,41T,50S,54S,83M,91V,120S,148V,183S,208G,225S
MN789882	PG14-UG000396	Uganda	2009		genomic RNA		subtype: A1	1	231	6A,15V,27I,54M,58I,71D,83L,92P,111I,120S,128D,148V,154K,169F,171V,178T,183G,203R,204G,207S,208G
MN788986	PG14-UG000398	Uganda	2009		genomic RNA		subtype: A	1	231	6A,11I,14P,15L,27I,30R,31G,54M,58I,71D,83L,92P,111T,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G,209T
MN789500	PG14-UG000401	Uganda	2009		genomic RNA		subtype: A	1	231	6A,14S,15L,27I,30R,31G,49S,50H,52I,58V,71D,83T,87Q,92P,96I,111P,120S,128D,131R,132K,148V,154K,169F,178T,183G,200G,203R,208G,209T
MN789328	PG14-UG000402	Uganda	2009		genomic RNA		subtype: ACD	1	231	14P,27I,41T,71D,83I,91V,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,207T,208G,216A,225S
MN789782	PG14-UG000403	Uganda	2009		genomic RNA		subtype: AD	1	231	6A,11I,14N,15L,27I,54M,58I,71D,83T,91V,98D,111P,116A,120G,128D,148V,154K,169F,177C,178T,183G,187D,200A,203R,207T,208G
MN789574	PG14-UG000405	Uganda	2009		genomic RNA		subtype: A	1	231	6A,9H,11I,12F,15L,27I,30R,31G,54M,58I,71D,83L,87Q,92P,96I,111P,116T,128D,148V,154K,169F,171C,178T,183G,200S,203R,207S,208G
MN788996	PG14-UG000406	Uganda	2009		genomic RNA		subtype: AD	1	231	6A,9H,11I,15L,26M,27I,31G,48L,50T,54M,58I,71D,83L,92P,111T,118V,120S,128D,148V,154K,169F,178T,187D,200S,207S,208G
MN788796	PG14-UG000407	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,15L,27I,41T,83L,148V,154K,180D,207T,208G
MN789879	PG14-UG000410	Uganda	2009		genomic RNA		subtype: A	1	231	6A,14P,15L,27I,29D,31G,33N,54M,58I,71D,83L,92P,95K,97I,98G,99G,100M,111P,120G,128D,148V,154K,169F,178T,187D,200S,203R,207A,208G
MN788824	PG14-UG000411	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,27I,41T,91V,120S,148V,180D,183T,187D,208G
MN789831	PG14-UG000413	Uganda	2009		genomic RNA		subtype: A1	1	231	6A,11I,15L,27I,54M,58I,71D,83M,111P,116A,120G,148V,154K,169F,171A,178T,183G,200S,207T,208G,210S
MN789306	PG14-UG000414	Uganda	2009		genomic RNA		subtype: A1	1	231	6A,11I,12L,14T,15L,27I,54M,58I,71D,83L,91V,92P,111P,115L,120S,128D,148V,154K,169F,178T,190M,200S,203R,208G
MN789209	PG14-UG000416	Uganda	2009		genomic RNA		subtype: D	1	231	6L,27I,50G,59I,83L,116A,120G,128D,148V,178T,199R,225S
MN789305	PG14-UG000418	Uganda	2009		genomic RNA		subtype: A	1	231	6A,11I,14P,15F,26A,27I,29D,36I,54M,58I,71D,83M,87Q,92P,96L,111T,120G,128D,148V,154K,169F,171A,178T,180D,187D,200S,203R,208G,210S,225S
MN789622	PG14-UG000419	Uganda	2009		genomic RNA		subtype: D	1	231	3I,6L,15L,27I,50T,83L,86P,87Q,91V,120S,148V,180D
MN790158	PG14-UG000420	Uganda	2009		genomic RNA		subtype: A	1	231	6A,11I,14G,15V,27I,54M,58I,71D,111I,116A,120S,128D,148V,154K,169F,171A,178T,180D,183G,200S,207T,208G,210S,225S
MN788784	PG14-UG000422	Uganda	2009		genomic RNA		subtype: AD	1	231	6A,15V,27I,54M,58I,71D,83L,92P,111I,120S,128D,148V,154K,169F,178T,203R,204G,208G
MN789621	PG14-UG000424	Uganda	2009		genomic RNA		subtype: AD	1	231	6V,14T,15L,27I,41T,54M,58I,71D,91V,111I,115V,116A,120A,128D,148V,153V,154K,169F,171I,180D,187D,191I,200S,203R,208G,225S
MN789501	PG14-UG000425	Uganda	2009		genomic RNA		subtype: A	1	231	6A,13N,14P,15L,31G,49S,54M,58I,59I,71D,83L,92P,111V,120S,128D,148V,154K,169F,178T,183G,191I,207S,208G,209T,210IM,211X,212G,213K,214Q,216A,225S
MN789029	PG14-UG000430	Uganda	2009		genomic RNA		subtype: A1	1	231	6A,11I,14S,15L,27I,54M,58I,71D,83L,91V,94N,111P,116A,120A,128D,148V,154K,169F,171V,178T,183G,200S,203R,207A,208G
MN789919	PG14-UG000431	Uganda	2009		genomic RNA		subtype: AD	1	231	3M,6A,11I,12Y,15L,27I,30R,31G,48A,54M,58I,59I,71D,83L,87Q,92P,96L,111P,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G
MN788922	PG14-UG000432	Uganda	2009		genomic RNA		subtype: A1	1	231	6A,11I,14S,15L,27I,31G,33N,54M,58I,71D,83L,92P,111P,120G,128D,148V,154K,169F,178T,180D,187D,200S,203R,207A,208G
MN789213	PG14-UG000435	Uganda	2009		genomic RNA		subtype: A1	1	231	6A,15L,27I,30R,31G,54M,58I,71D,79D,83L,92P,111P,120G,148V,154K,169F,171C,178T,180D,191I,200S,203R,207S,208G,225S
MN789981	PG14-UG000437	Uganda	2009		genomic RNA		subtype: AC	1	231	6A,14N,15L,27I,50G,52M,54M,58I,71D,83T,87P,91V,111P,116A,120G,128D,148V,153V,154K,169F,171I,178T,183G,187D,200S,207T,208G,225S
MN789253	PG14-UG000465	Uganda	2009		genomic RNA		subtype: A1	1	231	6A,11T,15L,26M,27I,30R,31G,45D,48I,54M,58I,71D,83L,86P,92P,111P,116A,128D,148V,154K,169F,180D,183G,200S,203R,207T,208G
MN789128	PG14-UG000466	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,14P,27I,41T,50S,83L,87Q,110N,120S,124V,148V,183G,208G,210S,225S
MN789804	PG14-UG000468	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,14P,41T,50S,54S,58A,79D,83L,91V,110N,120S,128D,148V,180D,203R,208G
MN789932	PG14-UG000472	Uganda	2009		genomic RNA		subtype: D	1	231	6L,83L,91V,110S,116A,120S,148V,178T,216S,225S
MN790060	PG14-UG000473	Uganda	2009		genomic RNA		subtype: A1	1	231	6A,14P,15L,27I,30R,31G,49S,50H,52V,58V,71D,83T,87Q,91L,92P,111P,120G,128D,131R,132K,148V,154K,169F,178T,183G,200G,203R,208G,209T,225S
MN789267	PG14-UG000480	Uganda	2009		genomic RNA		subtype: C	1	231	6L,26M,27I,41T,71D,83L,87Q,91V,96I,98D,116T,120S,128D,148V,154K,169F,171A,178T,180D,203R,204G,207Q,208G
MN789400	PG14-UG000491	Uganda	2009		genomic RNA		subtype: AD	1	231	6A,11I,12L,14T,15L,27I,31N,54M,58I,71D,83L,91V,92P,96L,111P,115L,120S,128D,148V,154K,163E,169F,178T,180D,200S,203R,207T,208G,215L
MN789261	PG14-UG000492	Uganda	2009		genomic RNA		subtype: AD	1	231	6A,11I,15L,27I,50G,54M,58I,71D,83L,91V,111P,116A,120G,128D,148V,154K,169F,178T,183G,203R,207A,208G
MN789257	PG14-UG000493	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,15L,27I,41T,78V,83L,91V,116A,120S,148V,154K,180D,183T,194S
MN790093	PG14-UG000494	Uganda	2009		genomic RNA		subtype: A1	1	231	6A,11I,14N,15V,27I,30R,31G,54S,58I,71D,83L,92P,111P,120S,128D,148V,153V,154K,169F,171V,178T,183G,187D,200S,203R,207S,208G
MN789246	PG14-UG000495	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,27I,83L,91N,116A,120G,148V
MN789539	PG14-UG000498	Uganda	2009		genomic RNA		subtype: ACD	1	231	6L,15M,27I,54M,58I,71D,83L,91V,111P,116A,120S,128D,148V,180D,200H,225S
MN789075	PG14-UG000499	Uganda	2009		genomic RNA		subtype: A	1	231	6A,12Q,14P,15L,27I,47T,48I,50H,54M,58V,71D,83T,87Q,107I,111P,116A,132K,135M,139H,148V,154K,169F,171I,179S,183T,187D,200S,203R,208G,225S
MN789927	PG14-UG000500	Uganda	2009		genomic RNA		subtype: A1	1	231	6V,11I,15L,26A,27I,30R,31G,54M,58I,71D,79D,83L,87Q,92P,96I,111P,116T,148V,154K,169F,171A,178T,180D,183S,200S,203R,207A,208G,225S
MN789662	PG14-UG000501	Uganda	2009		genomic RNA		subtype: A1	1	231	6A,11I,14G,15V,27I,30R,31G,54M,58I,71D,83L,92P,111P,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G
MN789611	PG14-UG000503	Uganda	2009		genomic RNA		subtype: ACD	1	231	6A,11I,14P,15M,27I,29D,31G,54M,58I,71D,83I,91V,94N,110N,111T,116A,120G,128D,148V,154K,169F,180D,187D,203R,204G,207Q,208G,210S
MN789288	PG14-UG000505	Uganda	2009		genomic RNA		subtype: A	1	231	6V,11I,14P,15L,26A,27I,30R,31G,54M,58I,71D,79D,83L,87Q,92P,96I,111P,116K,148V,154K,169F,171V,178T,191I,200S,203R,207A,208G,225S
MN789245	PG14-UG000506	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,14P,27I,41T,83T,86A,87Q,91V,96I,98D,116T,148V,180D,208G,225S
MN789140	PG14-UG000509	Uganda	2009		genomic RNA		subtype: AD	1	231	2V,6A,15V,27I,48I,54M,58I,71D,83M,111P,116A,120G,128D,148V,154K,169F,171C,178T,183G,191I,203R,207T,208G,210S,225S
MN789926	PG14-UG000510	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,41T,83L,91N,92P,93A,110N,116A,120G,148V,180D,225S
MN789153	PG14-UG000511	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,15L,27I,50G,83L,91V,116A,120S,148V,180D,208G
MN789141	PG14-UG000512	Uganda	2009		genomic RNA		subtype: A1	1	231	6A,14P,15V,27I,54M,58I,71D,83L,91V,111V,115M,116A,119V,120G,128D,132K,148V,154K,169F,171A,178T,183G,203R,204G,207T,208G
MN790074	PG14-UG000513	Uganda	2009		genomic RNA		subtype: AD	1	231	6A,11I,12Y,15L,27I,48A,54M,58V,71D,83L,86I,91V,111P,116A,120G,128D,148V,153V,154K,169F,171I,178T,183G,200S,207T,208G
MN789012	PG14-UG000516	Uganda	2009		genomic RNA		subtype: AD	1	231	6A,15V,16T,27I,54M,58I,71D,83L,116A,120A,128D,148V,153V,154K,169F,171I,178T,180D,194S,225S
MN790006	PG14-UG000517	Uganda	2009		genomic RNA		subtype: A	1	231	6A,15V,27I,54M,58I,71D,91P,111I,116A,120S,128D,148V,169F,171V,178T,180D,191I,200S,207T,208G,210S,225S
MN789560	PG14-UG000518	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,27I,41T,75D,83L,87Q,91V,115V,120S,148V,183S,208G,225S
MN789971	PG14-UG000519	Uganda	2009		genomic RNA		subtype: A1	1	231	6A,14S,15V,27I,54M,58I,71D,83L,86A,87Q,96I,111I,116A,120A,128D,148V,154K,169F,178T,183G,200S,203R,204G,207A,208G,210S
MN789290	PG14-UG000521	Uganda	2009		genomic RNA		subtype: ACD	1	231	6A,11I,15V,27I,54M,58I,71D,111P,116A,120G,128D,148V,154K,169F,171V,178T,180D,187D,203R,210S
MN789198	PG14-UG000522	Uganda	2009		genomic RNA		subtype: A	1	231	6A,11I,12L,14T,15L,27I,54M,58I,71D,83L,91V,92P,111P,115L,120S,148V,154K,169F,178T,180D,200S,203R,207T,208G
MN789294	PG14-UG000524	Uganda	2009		genomic RNA		subtype: A1	1	231	6A,11I,14P,15L,31G,33N,54M,58I,71D,83L,87Q,92P,96L,111P,128D,148V,153V,154K,169F,170R,171I,178T,183H,187D,191I,200S,203R,207S,208G,225S
MN788857	PG14-UG000529	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,15L,27I,41T,50S,54S,83L,87Q,91V,110S,120G,148V,180D,225S
MN790181	PG14-UG000530	Uganda	2009		genomic RNA		subtype: A	1	231	6A,15L,54M,58V,71D,83L,92P,96I,110N,115V,120G,128D,131R,148V,169F,171A,180D,200S,207I,208G
MN790200	PG14-UG000531	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,71D,83L,87Q,96I,110N,116A,148V,154K,177G,183H,203R,208G,225S
MN788744	PG14-UG000532	Uganda	2009		genomic RNA		subtype: A1	1	231	6A,11I,14P,15L,27I,30R,31G,54M,58I,71D,79D,83L,92P,111P,120S,148V,154K,169F,178T,183G,191I,200S,203R,207S,208G
MN790003	PG14-UG000533	Uganda	2009		genomic RNA		subtype: D	1	231	6L,14S,15L,27I,83L,86A,87Q,91V,110N,120S,148V,180D,225S,230I
MN788811	PG14-UG000534	Uganda	2009		genomic RNA		subtype: A1	1	231	6A,11T,15L,27I,30R,31G,50T,54M,58I,71D,83L,87Q,92P,111I,120S,128D,148V,154K,169F,178T,183G,187A,200S,203R,207S,208G
MN789254	PG14-UG000536	Rwanda	2009		genomic RNA		subtype: A	1	231	6A,11T,14S,15L,27I,30R,54M,58I,71D,83T,87Q,92P,96L,107S,110N,120G,124V,128D,148V,154K,169F,171A,180D,183S,187D,200S,207V,208G,225S
MN790198	PG14-UG000537	Uganda	2009		genomic RNA		subtype: A	1	231	6A,11I,13N,14P,15L,27I,30R,31G,54M,58I,71D,83L,92P,111T,120S,128D,148V,154K,169F,171C,178T,183G,200S,203R,207S,208G,210S,225A
MN788780	PG14-UG000538	Uganda	2009		genomic RNA		subtype: D	1	231	6L,15L,27I,83L,116A,148V,180D,208G,225S
MN788765	PG14-UG000539	Uganda	2009		genomic RNA		subtype: D	1	231	6L,27I,50S,79D,83L,91Q,116A,120S,148V,154K,180D,183T
MN789766	PG14-UG000540	Uganda	2010		genomic RNA		subtype: A1	1	231	6A,15V,27I,31G,33N,58I,71D,83L,92P,110N,111I,120G,128D,148V,169F,171V,180D,183G,200S,203R,207S,208G,225S
MN788998	PG14-UG000541	Uganda	2009		genomic RNA		subtype: A	1	231	6A,11T,12Y,14S,15L,30R,31G,54M,58I,83L,87Q,107S,111P,115V,116A,120G,128D,148V,153V,154K,169F,178T,180D,183S,203R,204G,207T,208G
MN788819	PG14-UG000542	Uganda	2009		genomic RNA		subtype: A1	1	231	6A,10L,11I,14T,15L,27I,54M,58I,71D,83L,87Q,91F,92P,96L,111P,116A,120H,128D,132K,148V,152E,154K,169F,171A,178T,180D,200S,203R,207A,208G,225S
MN788793	PG14-UG000543	Uganda	2009		genomic RNA		subtype: ACD	1	231	2V,6A,15L,27I,49S,50T,54M,58V,59I,71D,83L,92P,111P,116A,120G,128D,131R,148V,154K,169F,178T,200N,207T,208G,225S
MN789710	PG14-UG000544	Uganda	2009		genomic RNA		subtype: A	1	231	6A,9A,15L,27I,30R,31G,48I,54M,58I,71D,83L,92P,111P,115V,120G,128D,148V,154K,169F,178T,180D,187D,200S,203R,208G,225Q
MN790034	PG14-UG000545	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,27I,83L,116A,120S,148V,180D,208G,225S
MN789505	PG14-UG000546	Uganda	2009		genomic RNA		subtype: D	1	231	6L,11I,27I,44A,45D,50G,59I,68I,75D,83L,91V,96L,128D,148V,154K,160S,180D,225S
MN790095	PG14-UG000547	Uganda	2009		genomic RNA		subtype: CD	1	231	6L,10L,14P,15L,27I,41T,71D,83L,91V,116A,120S,128D,148V,154K,170R,180D,208G,225S
MN790035	PG14-UG000548	Uganda	2009		genomic RNA		subtype: AD	1	231	6A,11I,12L,14T,15L,27I,54M,58I,71D,83L,86I,92P,111P,115L,116A,120S,124V,128D,148V,154K,169F,180D,187D,200S,207T,208G,225S
MN789950	PG14-UG000549	Uganda	2009		genomic RNA		subtype: D	1	231	6L,14P,15M,31G,33K,44A,68I,83L,107V,115V,116D,118I,120G,148V,178T,204S,208G,210S
MN789026	PG14-UG000550	Uganda	2009		genomic RNA		subtype: D	1	231	6L,13S,14P,15L,27I,83T,87Q,91V,96I,110N,116A,120S,124M,148V,154K,160S,177G,208G,210S
MN789757	PG14-UG000553	Uganda	2010		genomic RNA		subtype: AD	1	231	6A,11I,14N,15L,27I,54M,58I,83L,91V,111P,115V,116A,120S,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G,225S
MN789861	PG14-UG000554	Uganda	2010		genomic RNA		subtype: AD	1	231	6L,27I,41T,79D,83A,91N,92P,116A,120S,148V,180D,208G,225S
MN789192	PG14-UG000555	Uganda	2010		genomic RNA		subtype: AD	1	231	6L,14N,27I,83L,91A,120S,148V,154K,183G,208G,225S
MN789463	PG14-UG000556	Uganda	2010		genomic RNA		subtype: AD	1	231	6L,27I,83L,91V,116A,120S,148V,180D,208G,225S
MN789099	PG14-UG000557	Uganda	2010		genomic RNA		subtype: D	1	231	6L,11I,12Y,14T,15L,27I,71D,83L,87Q,96I,111P,116Q,120S,148V,154K,180D
MN789489	PG14-UG000558	Uganda	2010		genomic RNA		subtype: A	1	231	6A,11I,15L,16T,27I,31G,48I,54M,58I,71D,83L,87Q,92P,96L,111P,118I,120G,126I,128D,148V,154K,169F,178T,183G,203R,207S,208G
MN789147	PG14-UG000559	Uganda	2010		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,41T,83L,115V,120G,148V,180D
MN789142	PG14-UG000560	Uganda	2010		genomic RNA		subtype: AD	1	231	6A,12Y,14G,15V,27I,30R,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,183G,203R,207T,208G,216A
MN789602	PG14-UG000561	Uganda	2010		genomic RNA		subtype: A	1	231	6A,11I,14P,15F,27I,31G,54M,58V,71D,83I,111T,116A,128D,148V,154K,169F,171C,178T,183G,187D,200S,203R,207S,208G
MN789265	PG14-UG000562	Uganda	2010		genomic RNA		subtype: AD	1	231	6A,11T,14S,15L,27I,41T,54M,58I,83L,148V,154K,180D,225S
MN789530	PG14-UG000564	Uganda	2010		genomic RNA		subtype: AD	1	231	6A,11I,12Y,14S,15M,27I,54M,58I,71D,83L,87Q,92P,111P,120S,128D,148V,154K,163E,169F,171A,178T,183G,200S,207T,208G,210S,225S
MN790059	PG14-UG000565	Tanzania	2010		genomic RNA		subtype: AD	1	231	6A,11I,12Y,14S,15M,27I,54M,58I,71D,83L,87Q,92P,111P,120S,128D,148V,154K,163E,169F,171A,178T,183G,200S,207T,208G,210S,225S
MN788924	PG14-UG000567	Uganda	2010		genomic RNA		subtype: ACD	1	231	6L,14P,16T,27I,41T,75D,83L,96I,116T,120S,148V,154K,180D,225S
MN790109	PG14-UG000568	Tanzania	2010		genomic RNA		subtype: D	1	231	6L,14P,27I,86M,87Q,91L,148V,180D,225S
MN789839	PG14-UG000569	Uganda	2010		genomic RNA		subtype: A1	1	231	2V,6A,11I,14S,15L,27I,31G,41T,58I,71D,72A,75D,83L,91V,111P,115V,116A,120G,148V,154K,169F,171C,177G,180D,200S,203R,207A,208G
MN788975	PG14-UG000571	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,14P,54I,79D,83L,91V,116A,120G,123A,148V,154K,177G,180D,208G,225S
MN790013	PG14-UG000572	Uganda	2009		genomic RNA		subtype: AD	1	231	6A,11I,14N,15L,27I,54M,58I,71D,83T,91V,98D,111P,116A,120G,128D,148V,154K,169F,177C,178T,183G,187D,200A,203R,207T,208G
MN789869	PG14-UG000573	Uganda	2009		genomic RNA		subtype: AD	1	231	6A,12S,15L,54M,58V,71D,83L,92P,115V,120G,128D,131R,148V,154K,169F,171V,178T,200S,203R,207T,208G
MN790054	PG14-UG000575	Uganda	2009		genomic RNA		subtype: AD	1	231	6M,14T,15M,27I,54C,58I,71D,83L,91A,120S,128D,148V,154K,177G,208G,216A,225S
MN789698	PG14-UG000576	Uganda	2009		genomic RNA		subtype: A	1	231	6A,11I,14S,15L,27I,54M,58I,71D,83L,86I,111P,116A,120G,128D,148V,154K,169F,171V,178T,183G,200S,207S,208G
MN789436	PG14-UG000577	Uganda	2009		genomic RNA		subtype: A	1	231	6A,15V,27I,41T,54M,58I,71D,83L,87Q,92P,96I,110N,111I,116A,120S,128D,148V,154K,169F,180D,183G,187D,191I,203R,207A,208G,225S
MN789535	PG14-UG000578	Uganda	2009		genomic RNA		subtype: D	1	231	6L,27I,41T,83L,115V,116A,120S,124V,148V,180D,225S
MN789623	PG14-UG000579	Uganda	2010		genomic RNA		subtype: A	1	231	2V,6A,11M,15L,26A,27I,30R,31G,50T,54M,58I,71D,83L,87Q,92P,111T,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G
MN789009	PG14-UG000580	Uganda	2010		genomic RNA		subtype: AD	1	231	6L,15L,27I,41T,50S,54S,83L,86A,87Q,91V,98D,116A,120G,123A,148V,225S
MN789292	PG14-UG000582	Uganda	2010		genomic RNA		subtype: AD	1	231	6A,15V,27I,54M,58I,71D,83L,86A,87Q,96I,111P,116A,120G,128D,148V,154K,169F,178T,183G,200S,203R,207T,208G
MN788748	PG14-UG000583	Uganda	2010		genomic RNA		subtype: A1	1	231	6A,15M,27I,54M,58I,71D,83L,87Q,111P,116A,120G,128D,148V,154K,169F,178T,183G,187D,200S,203R,208G
MN789905	PG14-UG000584	Uganda	2010		genomic RNA		subtype: A	1	231	6A,11I,15V,26A,27I,30R,31G,58I,71D,83L,87P,91V,98D,111P,116A,120H,128D,148V,169F,178T,183G,200S,203R,207S,208G
MN790108	PG14-UG000585	Rwanda	2010		genomic RNA		subtype: ACD	1	231	6A,11I,14P,15F,16T,27I,30R,31G,54M,58I,71D,83L,92P,96I,111P,116A,118I,120G,128D,148V,154K,162K,169F,171V,178T,187D,199R,207Q,208G,209S,225S,230I
MN789931	PG14-UG000586	Uganda	2010		genomic RNA		subtype: AD	1	231	6A,9H,14P,15L,26A,27I,30R,31G,54M,58I,71D,83L,87Q,91F,92P,111P,120H,128D,148V,154K,169F,178T,183S,187D,200S,203R,208G,210S
MN789383	PG14-UG000587	Uganda	2010		genomic RNA		subtype: G	1	231	6A,10P,11I,15M,27I,45D,54M,58I,71D,86Q,87Q,91F,92P,96I,116T,120S,148V,154K,169F,178T,183G,203R,208G,225S
MN789923	PG14-UG000588	Uganda	2010		genomic RNA		subtype: AD	1	231	6A,11I,14N,15L,27I,54M,58I,71D,83L,91V,111P,116A,120S,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G
MN789755	PG14-UG000589	Uganda	2010		genomic RNA		subtype: D	1	231	6L,14P,27I,41T,83I,91A,120S,128D,148V,180D,208G,210N,225S
MN788870	PG14-UG000590	Uganda	2010		genomic RNA		subtype: A1	1	231	6A,11I,14P,15V,26A,27I,30R,36I,54M,58V,71D,83L,111P,116A,120G,128D,129L,148V,154K,169F,180D,187D,200S,207A,208G,210S
MN789034	PG14-UG000591	Uganda	2010		genomic RNA		subtype: A1	1	231	6A,14N,15L,27I,54M,58I,71D,83M,91V,111P,116Q,120G,128D,148V,154K,169F,171V,178T,183G,200S,203R,207S,208G
MN789166	PG14-UG000593	Uganda	2009		genomic RNA		subtype: D	1	231	2L,6L,16T,27I,41T,50S,75D,83L,91V,110S,120S,148V,154K,180D,225S
MN789425	PG14-UG000594	Uganda	2009		genomic RNA		subtype: AD	1	231	6A,9H,14P,15L,26A,27I,30R,31G,54M,58I,71D,83L,87Q,91F,92P,120G,148V,178T,180D,183Q,209T,225S
MN789996	PG14-UG000598	Uganda	2009		genomic RNA		subtype: A1	1	231	6A,11I,14N,15L,27I,41T,54M,58I,71D,75D,91V,111I,116A,120S,128D,148V,154K,169F,177G,180D,187D,191I,200S,203R,208G,225S
MN788774	PG14-UG000599	Uganda	2009		genomic RNA		subtype: A1	1	231	6A,14T,15L,27I,41T,58I,71D,75D,87Q,91V,96I,111I,116A,128D,148V,154K,169F,171I,177G,187D,191I,200S,203R,208G,225S
MN789995	PG14-UG000600	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,27I,83L,87Q,91N,116A,120S,148V,230I
MN789205	PG14-UG000601	Uganda	2009		genomic RNA		subtype: AD	1	231	6A,11I,12Y,15L,27I,30R,31G,48L,54M,58I,71D,83L,92P,111P,120G,128D,148V,154K,169F,178T,180D,194S,200S,203R,208G,225S
MN789326	PG14-UG000603	Uganda	2009		genomic RNA		subtype: ACD	1	231	2V,6A,15L,27I,50T,54M,58V,59I,71D,83L,92P,111P,116A,120G,128D,131R,148V,154K,169F,171C,178T,180D,200N,207T,208G,225S
MN789777	PG14-UG000605	Uganda	2009		genomic RNA		subtype: AD	1	231	6A,11I,15V,27I,36I,45D,58I,71D,83L,86I,91V,111I,116A,128D,148V,154K,177G,178T,200S,208G,225S
MN789665	PG14-UG000606	Uganda	2009		genomic RNA		subtype: A	1	231	6A,9H,13N,15L,27I,30R,31G,48I,54M,58I,59I,71D,83L,87Q,92P,111P,115V,120S,128D,148V,154K,169F,177C,178T,183G,187Q,200S,203R,208G,225S
MN789944	PG14-UG000607	Uganda	2009		genomic RNA		subtype: A	1	231	6V,11I,14P,15L,27I,29D,54M,58I,71D,83L,111P,116A,120G,128D,148V,154K,169F,171A,178T,183G,207S,208G
MN789418	PG14-UG000608	Uganda	2009		genomic RNA		subtype: D	1	231	6L,27I,41T,83L,91N,116A,120S,148V,154K,178T,180D,199R,208G,225S,230I
MN789918	PG14-UG000609	Uganda	2009		genomic RNA		subtype: A1	1	231	6A,10W,11T,14S,15L,27I,54M,58I,71D,83I,111P,116A,120G,128D,148V,154K,169F,171A,178T,180D,200S,203R,207A,208G
MN790000	PG14-UG000610	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,15L,27I,83L,87R,91A,98D,110N,120S,148V,178T
MN789769	PG14-UG000612	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,27I,83L,91P,116A,118I,120G,148V,183G,208G,225S
MN789072	PG14-UG000614	Uganda	2009		genomic RNA		subtype: AD	1	231	6A,10W,14G,15V,27I,30R,31G,54M,58I,71D,83L,92P,111P,128D,148V,154K,169F,178T,183G,187D,200S,203R,208G
MN788818	PG14-UG000641	Uganda	2009		genomic RNA		subtype: ACD	1	231	6V,27I,41T,71D,83T,91V,96L,116A,128D,148V,154K,169F,178T,187D,200N,203R,208G,210S,225S
MN788768	PG14-UG000642	Uganda	2009		genomic RNA		subtype: ACD	1	231	6L,27I,41T,83L,96V,120S,148V,154K,178T
MN789207	PG14-UG000643	Uganda	2009		genomic RNA		subtype: A	1	231	6A,15L,54M,58V,71D,83L,92P,96I,115V,120G,131R,148V,169F,178T,200G,207A,208G
MN790172	PG14-UG000644	Uganda	2009		genomic RNA		subtype: A	1	231	6V,14P,15M,27I,29D,31G,54M,58I,71D,79D,83L,111T,116A,120G,128D,148V,154K,169F,171V,180D,191I,200S,207T,208G
MN788812	PG14-UG000645	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,14S,15L,27I,50T,83T,116A,148V,180D,225S
MN789051	PG14-UG000646	Uganda	2009		genomic RNA		subtype: D	1	231	6L,27I,41T,71D,83L,91N,110S,120S,148V,154K,180D
MN789439	PG14-UG000648	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,27I,50G,83L,96L,116A,120H,121T,148V,180D,200M,204G,206W,207K,208T,225S,230I
MN788891	PG14-UG000649	Uganda	2009		genomic RNA		subtype: AD	1	231	6A,11I,12Y,14S,26A,27I,30R,31G,54M,58I,71D,83L,87Q,92P,111P,116A,120G,123G,128D,148V,154K,169F,171A,180D,183G,200S,203R,207A,208G,210S,225S
MN789841	PG14-UG000650	Uganda	2009		genomic RNA		subtype: A1	1	231	6A,11I,15L,27I,30R,31G,48I,54M,58I,71D,83L,92P,111P,128D,148V,154K,169F,171V,180D,181Y,182G,183K,184Q,186A,187D,200S,203R,208G
MN789119	PG14-UG000651	Uganda	2009		genomic RNA		subtype: ACD	1	231	6A,15V,26A,27I,29D,50S,54M,58I,71D,83T,91V,111I,116A,120G,128D,148V,154K,169F,180D,187D,203R,204G,207A,208G,225S
MN789087	PG14-UG000652	Uganda	2009		genomic RNA		subtype: A	1	231	6A,15V,27I,31G,48I,54M,58I,71D,83L,91V,92P,120S,128D,148V,154K,169F,171C,178T,200S,203R,207S,208G,209T,225S
MN789335	PG14-UG000653	Uganda	2009		genomic RNA		subtype: D	1	231	6L,27I,29D,41T,83L,86A,87Q,91V,96I,116Q,120S,148V,154K,180D,225S
MN789348	PG14-UG000654	Uganda	2009		genomic RNA		subtype: D	1	231	6L,27I,50G,83M,120S,148V,180D,203R,225S
MN790136	PG14-UG000655	Uganda	2009		genomic RNA		subtype: A	1	231	2V,3L,6A,11I,12Y,14P,15F,27I,30R,31G,48A,54M,58I,71D,83L,86A,87Q,96I,111P,115V,116A,120S,128D,148V,154K,169F,178T,183G,200S,203R,207T,208G,210S
MN789828	PG14-UG000657	Uganda	2009		genomic RNA		subtype: D	1	231	6L,27I,41T,83M,120S,148V,180D,203R,225S
MN789280	PG14-UG000658	Uganda	2009		genomic RNA		subtype: D	1	231	6L,14T,15L,27I,41T,45D,54S,83L,116A,120H,148V,154K,180D,210S,225S
MN789473	PG14-UG000659	Uganda	2009		genomic RNA		subtype: AD	1	231	6A,11I,14N,15L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,180D,187D,191I,200S,207T,208G
MN789465	PG14-UG000660	Uganda	2009		genomic RNA		subtype: A	1	231	6A,11M,13N,14P,15L,26A,27I,30R,31G,50G,54M,58I,71D,83L,86A,87Q,92P,96I,111T,112A,115M,116A,120S,128D,148V,154K,169F,171V,183G,187D,200S,203R,207S,208G
MN789191	PG14-UG000663	Uganda	2009		genomic RNA		subtype: A	1	231	6A,11I,14N,15L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,180D,199R,203R,204G,207A,208G,225S,230I
MN789408	PG14-UG000664	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,27I,31G,33N,41A,79D,83Q,91N,120S,128D,148V,154K,177C,180D,225S
MN789362	PG14-UG000667	Uganda	2009		genomic RNA		subtype: D	1	231	6L,14P,27I,41T,79D,83Q,87Q,110N,120S,148V,154K,183G,225S
MN789632	PG14-UG000668	Uganda	2009		genomic RNA		subtype: A	1	231	6A,11I,14T,15L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,183G,200S,203R,207T,208G
MN789651	PG14-UG000669	Uganda	2009		genomic RNA		subtype: D	1	231	6L,14P,16T,26M,27I,41T,83L,120S,148V,180D,208G,210S
MN789518	PG14-UG000670	Uganda	2009		genomic RNA		subtype: D	1	231	6L,27I,41T,83L,87Q,91N,92P,120S,148V,180D,199R,208G,230I
MN788863	PG14-UG000671	Uganda	2009		genomic RNA		subtype: D	1	231	6L,14T,15L,27I,41T,61D,83L,87Q,96I,116T,124V,148V,154K,180D,211I,225S
MN789138	PG14-UG000673	Uganda	2009		genomic RNA		subtype: A1	1	231	6A,10L,11I,14T,15L,27I,54M,58I,71D,83L,87Q,91F,92P,96L,111P,116A,120H,128D,132K,148V,152E,154K,169F,171A,178T,180D,200S,203R,208G,225S
MN789846	PG14-UG000677	Uganda	2009		genomic RNA		subtype: A1	1	231	6A,11T,15M,27I,50H,54M,71D,83L,87Q,92P,96I,112H,116T,120A,128D,148V,154K,169F,178T,183G,203R,207S,208G,210S
MN789374	PG14-UG000679	Uganda	2009		genomic RNA		subtype: AD	1	231	13S,14P,15L,27I,31N,41T,83L,87Q,91Q,110N,116A,120G,148V,180D,187D,200N,203R,208G,210S
MN789097	PG14-UG000680	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,15L,27I,29D,41T,83L,87Q,91V,98D,116N,120G,148V,154K,180D,208G,210S,225S
MN789241	PG14-UG000682	Uganda	2009		genomic RNA		subtype: D	1	231	6L,14P,27I,41T,91A,120S,148V,180D
MN789404	PG14-UG000684	Uganda	2009		genomic RNA		subtype: D	1	231	6L,15L,16T,27I,41T,83L,91V,120S,148V,154K,160S,178T,199R
MN789472	PG14-UG000685	Uganda	2009		genomic RNA		subtype: D	1	231	6L,15L,27I,41M,83T,91N,92P,116A,120S,124V,148V,154K,180D,199R
MN789786	PG14-UG000687	Uganda	2009		genomic RNA		subtype: A	1	231	2V,6A,15L,27I,30R,31G,54M,58I,71D,83L,87Q,92P,96L,111P,116A,128D,129L,148V,154K,169F,178T,183G,200S,203R,207S,208G
MN789274	PG15-UG000001	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14S,15L,27I,54L,83T,91V,110S,120S,148V,180D,208G,225S
MN789696	PG15-UG000004	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,15M,27I,49S,50S,54M,58I,71D,83L,91V,116A,120G,128D,131R,148V,154K,169F,178T,183G,191I,200S,203R,207A,208G,210S
MN789375	PG15-UG000006	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,41T,83L,86P,87Q,91V,96I,98D,110N,116T,148V,180D
MN788797	PG15-UG000010	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,15V,27I,45D,54M,58I,83M,116A,120S,124V,148V,180D
MN788947	PG15-UG000012	Uganda	2012		genomic RNA		subtype: ACD	1	231	6V,27I,41T,71D,83T,91V,96L,116A,128D,148V,154K,169F,178T,187D,200N,203R,208G,210S,225S
MN789330	PG15-UG000013	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,11I,27I,50H,83I,116A,120S,124V,148V,170R,180D
MN789979	PG15-UG000015	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,27I,41T,83L,87Q,91V,98D,116A,120S,124V,148V,183G,208G
MN789966	PG15-UG000016	Uganda	2012		genomic RNA		subtype: D	1	231	6L,14T,15L,27I,41T,50A,83L,87Q,91V,110S,120S,124V,148V,154K,180D,210S
MN789590	PG15-UG000020	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,14G,15V,27I,50C,54M,58I,71D,83L,91V,111P,116A,120G,128D,148V,154K,169F,180D,183G,200S,203R,207T,208G,225S
MN789263	PG15-UG000022	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,15L,27I,31G,33N,41A,79D,83Q,87P,88V,91N,92P,98D,120S,128D,148V,154K,177C,180D,225S
MN789303	PG15-UG000024	Uganda	2012		genomic RNA		subtype: AD	1	231	5T,6A,14P,15L,16T,27I,54M,58V,71D,83T,87Q,88V,92P,96L,110N,111T,120G,123A,128D,148V,154K,169F,171V,178T,187N,203R,208G,210S,211I
MN789594	PG15-UG000025	Uganda	2012		genomic RNA		subtype: C	1	231	6L,11A,12Y,14N,15L,27I,41T,50S,71D,83L,86A,87Q,91L,116A,120S,124V,148V,154K,169F,171V,178T,180D,187D,203R,207S,208G,225S
MN788937	PG15-UG000026	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,27I,83L,87Q,110N,120S,148V,180D,205M,208G,225S
MN789022	PG15-UG000027	Uganda	2012		genomic RNA		subtype: AD	1	231	6V,27I,50H,71D,83L,91N,98D,116A,120S,124V,148V,170R,180D
MN789690	PG15-UG000029	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,10L,11I,14S,15L,27I,54M,58I,71D,83L,87Q,91F,92P,96L,111P,116A,120H,128D,132K,148V,152E,154K,169F,171A,178T,200S,203R,208G
MN789144	PG15-UG000030	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,11A,15L,27I,54M,58V,71D,79D,83I,111I,116A,120G,128D,148V,154K,169F,174S,178T,180D,203R,207A,208G
MN789062	PG15-UG000031	Uganda	2012		genomic RNA		subtype: D	1	231	6L,27I,33N,83L,87Q,96I,110S,116T,120S,148V,170R,180D,208G
MN789011	PG15-UG000032	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,13N,14P,15V,27I,30R,31G,50G,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,171I,178T,183G,200S,203R,207T,208G
MN789442	PG15-UG000033	Uganda	2012		genomic RNA		subtype: ACD	1	231	6A,11I,27I,54M,58I,71D,83L,92P,100K,111V,116A,120S,148V,169F,178T,187D,200S,203R,208G
MN788936	PG15-UG000034	Uganda	2012		genomic RNA		subtype: A	1	231	6A,9A,11I,15L,27I,30R,31G,54M,58I,71D,83I,86A,91V,92Q,111I,128D,148V,154K,169F,183G,200S,203R,207A,208G,225S,230I
MN788737	PG15-UG000035	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,15V,27I,54M,58I,83L,116T,120S,148V,180D,225S
MN790063	PG15-UG000037	Uganda	2012		genomic RNA		subtype: D	1	231	6L,14P,15M,17A,41I,96V,110N,113D,116A,120G,124V,148V,180D,203R,208G
MN789440	PG15-UG000041	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,27I,29D,41T,83L,86Q,87Q,91V,96I,110S,116T,120S,148V,180D,183T,207T,208G,216S,225S
MN790122	PG15-UG000042	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,15L,27I,41T,50S,83L,91V,110N,120S,148V,154K,180D,210S
MN790004	PG15-UG000043	Uganda	2012		genomic RNA		subtype: ACD	1	231	6A,14S,15L,27I,54M,58V,71D,83L,91V,111P,116A,120G,128D,148V,154K,169F,177G,180D,187D,203R,208G
MN789629	PG15-UG000046	Uganda	2013		genomic RNA		subtype: ACD	1	231	6A,11I,14G,15V,26A,27I,30R,31G,36I,54M,58I,71D,79D,83L,86P,87Q,91V,96I,116A,128D,148V,154K,169F,178T,180D,187D,203R,208G
MN788897	PG15-UG000047	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,15L,16T,31G,33N,36I,83I,91V,115V,116A,120S,124V,148V,178T,180D,203R,208H,225S
MN789758	PG15-UG000048	Uganda	2012		genomic RNA		subtype: AD	1	231	6H,15L,26A,27I,41T,50A,58I,79D,83L,116A,120S,148V,183G,225S
MN789897	PG15-UG000049	Uganda	2012		genomic RNA		subtype: ACD	1	231	6A,11I,12Y,15L,27I,30R,31G,48A,54M,58I,71D,79D,83L,87Q,111P,115M,116A,120G,148V,154K,169F,177C,178T,183G,187D,200S,203R,207S,208G,210S
MN789323	PG15-UG000050	Uganda	2012		genomic RNA		subtype: D	1	231	6L,15L,27I,41T,83M,110N,120S,148V,154K,180D,225S
MN789394	PG15-UG000052	Uganda	2012		genomic RNA		subtype: A	1	231	6A,15L,27I,30R,31G,54M,58I,71D,83L,92P,96I,111I,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G
MN789092	PG15-UG000054	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,11I,14G,15V,27I,50C,54M,58I,71D,83L,91V,111P,116A,120G,128D,148V,154K,169F,171A,180D,183G,200A,203R,207T,208G
MN789583	PG15-UG000055	Uganda	2013		genomic RNA		subtype: A2DG	1	231	6A,10W,11T,50G,83L,87P,91V,96L,116A,120H,148V,180D,187D,200S
MN789889	PG15-UG000056	Uganda	2012		genomic RNA		subtype: ACD	1	231	6L,27I,41T,120S,148V,154K,180D,225S
MN789640	PG15-UG000057	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14N,27I,83L,91V,116A,120S,124V,148V,180D,208G,225S
MN789180	PG15-UG000058	Uganda	2013		genomic RNA		subtype: D	1	231	2V,6L,15L,16T,27I,31N,36I,50S,83L,96L,115L,116A,118I,120H,128D,148V,154K,180D,199R,225A
MN788769	PG15-UG000061	Uganda	2013		genomic RNA		subtype: ACD	1	231	6A,14V,15L,16T,27I,54S,58V,71D,83L,92P,111I,115V,120S,148V,154K,169F,178T,183G,207T,208G
MN789677	PG15-UG000063	Uganda	2013		genomic RNA		subtype: ACD	1	231	6A,14S,15L,27I,31G,33N,54M,58I,83L,87Q,91V,111P,116A,120G,128D,148V,154K,169F,178T,183G,187D,203R,207A,208G
MN790011	PG15-UG000064	Uganda	2013		genomic RNA		subtype: D	1	231	2V,6L,27I,31N,36I,50S,83L,96L,111P,115L,116A,120H,128D,148V,154K,180D,199R,225A
MN788940	PG15-UG000067	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,14S,15L,27I,41T,83L,91V,110N,116A,120S,148V,154K,180D,208G,210S
MN789987	PG15-UG000068	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,14G,15V,27I,31G,41T,50G,54M,57K,58M,59I,71D,79D,83L,87Q,91V,92P,96I,111P,115V,116A,120G,124V,128D,148V,154K,169F,177C,178T,183G,200S,203R,207S,208G,225S
MN789792	PG15-UG000069	Uganda	2013		genomic RNA		subtype: A	1	231	6A,10L,11I,14N,15L,27I,54M,58I,71D,83L,91V,111S,116A,120S,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G
MN789010	PG15-UG000071	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11I,14S,15L,27I,54M,58I,71D,83T,91V,111T,116A,120G,128D,148V,154K,169F,178T,183G,187D,191I,200S,203R,208G
MN789634	PG15-UG000072	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11I,12Y,15L,27I,33N,54M,58V,71D,83L,91V,92Q,111F,131R,148V,154K,180D,215L,230I
MN790055	PG15-UG000076	Uganda	2013		genomic RNA		subtype: D	1	231	6L,14S,15L,27I,41T,83L,86I,91A,120S,148V,178T,200N
MN788988	PG15-UG000077	Uganda	2013		genomic RNA		subtype: D	1	231	2V,6M,14P,15L,27I,41T,50S,71D,83L,110N,116A,128D,148V,180D
MN789167	PG15-UG000080	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,14T,15L,27I,31S,41T,83L,91T,110N,120S,148V,154K,180D,199R
MN789435	PG15-UG000082	Uganda	2013		genomic RNA		subtype: AD	1	231	3M,6A,11I,15L,26A,27I,30R,31G,36I,50G,54M,58I,71D,79D,83L,87Q,92P,96I,111P,120S,148V,153V,154K,169F,171I,177G,180D,203R,204G,207Q,208G
MN789295	PG15-UG000084	Uganda	2013		genomic RNA		subtype: A	1	231	6A,14T,15L,27I,47C,54M,58I,71D,83L,96I,100T,111P,116R,120S,128D,148V,154K,169F,178T,200S,203R,207S,208G
MN790070	PG15-UG000085	Uganda	2013		genomic RNA		subtype: D	1	231	6L,15L,27I,31G,33N,41A,79D,83Q,91T,120S,128D,148V,154K,177C,180D,225S
MN789487	PG15-UG000086	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11M,14S,15L,27I,54M,58I,71D,83L,87Q,96I,111P,115V,116A,120S,128D,148V,154K,169F,178T,180D,200S,203R,208G
MN789117	PG15-UG000089	Uganda	2013		genomic RNA		subtype: D	1	231	6L,14V,15M,27I,33N,41T,71D,83T,91T,96L,120S,135V,148V,154K,177G,180D,225S
MN789511	PG15-UG000090	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,50T,83L,94N,96I,116T,120S,128D,148V,180D,199R
MN788900	PG15-UG000091	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11I,15V,26A,27I,30R,31G,54M,58I,71D,83L,92P,111M,116A,120G,123A,128D,148V,153V,154K,169F,171I,178T,183G,200S,203R,207S,208G,210S
MN789807	PG15-UG000093	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,11I,14S,15L,26A,27I,30R,31G,45D,54M,58I,71D,83L,92P,111P,148V,169F,183G,200S,203R,207A,208G
MN789844	PG15-UG000095	Uganda	2012		genomic RNA		subtype: A1	1	231	6A,11T,14H,15M,27I,31G,54M,58I,71D,111T,116A,148V,154K,169F,180D,187D,200S,207T,208G
MN790072	PG15-UG000096	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,71D,83M,87Q,91V,98D,120S,148V,154K,177G,180D,208G,225S
MN789796	PG15-UG000099	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,11I,14S,15L,27I,30R,54M,58I,71D,83L,91V,111T,116A,120G,128D,148V,154K,163E,169F,180D,183G,187D,200S,208G
MN790190	PG15-UG000100	Uganda	2013		genomic RNA		subtype: D	1	231	6L,14V,15L,31S,41T,50T,83T,87Q,91V,110N,116A,120S,148V,180D,199R,200N,225S
MN790037	PG15-UG000101	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,15L,27I,83L,116A,120S,148V,180D
MN789367	PG15-UG000103	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11I,14N,15L,27I,54M,58I,71D,83L,96L,111P,116A,120S,128D,148V,154K,169F,171V,178T,180D,187D,200S,207T,208G
MN789319	PG15-UG000104	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,54S,58A,79D,83L,148V,154K,180D
MN790170	PG15-UG000105	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,10P,11I,14S,15L,27I,54M,58I,71D,83M,87Q,91V,96L,111P,120G,148V,154K,169F,178T,183G,200S,203R,207A,208G
MN789351	PG15-UG000106	Uganda	2013		genomic RNA		subtype: AD	1	231	3I,6A,15V,27I,54M,58I,71D,79D,83L,111P,116A,120G,128D,148V,154K,169F,171I,180D,187D,203R,208G,230I
MN789490	PG15-UG000107	Uganda	2013		genomic RNA		subtype: ACD	1	231	6L,11I,14S,15M,27I,71D,83L,87Q,91V,96L,116A,120H,148V,154K,169F,171V,177S,187D,191I,207T,208G,210S
MN788980	PG15-UG000108	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11I,15V,27I,54M,58I,71D,83T,87Q,95H,96I,111T,116A,120G,128D,148V,154K,169F,178T,183G,191I,203R,204G,207Q,208G,210S
MN789544	PG15-UG000110	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,11I,14T,15L,27I,41T,50A,91L,92V,93A,116A,120S,148V,180D,183T
MN789461	PG15-UG000111	Uganda	2012		genomic RNA		subtype: D	1	231	6L,27I,41T,83L,91N,110N,120S,148V,178T,201L
MN789358	PG15-UG000112	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11A,12Y,14N,15L,41T,83L,91V,116A,120S,148V,180D,200H,208G,210S
MN788760	PG15-UG000113	Uganda	2013		genomic RNA		subtype: D	1	231	6L,14S,15L,27I,83L,91V,96I,110N,116T,148V,154K,180D,225S
MN789550	PG15-UG000114	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11I,13S,14P,15L,27I,30R,31G,54M,58I,71D,79D,83L,86A,87Q,91F,92P,111T,120S,148V,154K,160T,169F,180D,187D,200S,203R,208G,210S,225S
MN788779	PG15-UG000115	Uganda	2012		genomic RNA		subtype: AD	1	231	3I,6A,9G,15L,27I,48V,54M,58V,71D,83L,92P,110N,111V,116A,118I,120G,128D,131R,148V,154K,169F,178T,180D,200S,203R,207A,208G
MN788879	PG15-UG000116	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,11I,15V,27I,31G,54M,58I,71D,83L,92P,111T,128D,148V,154K,169F,178T,200G,203R,207S,208G,225S
MN788895	PG15-UG000117	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,11I,12L,14T,15L,27I,54M,58I,71D,83L,91V,111P,115L,116A,120G,128D,148V,154K,169F,178T,180D,200S,203R,207A,208G
MN789555	PG15-UG000118	Uganda	2013		genomic RNA		subtype: A	1	231	6A,10L,11I,14N,15L,27I,54M,58I,71D,83L,87Q,91Y,92P,96L,111P,116A,120H,128D,132K,148V,152E,154K,169F,171A,178T,180D,191I,200S,203R,207A,208G,225S
MN790140	PG15-UG000119	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11I,15V,27I,31G,41T,58I,71D,83I,96I,111I,116T,120G,148V,154K,169F,178T,180D,191I,200S,207T,208G,225S
MN790163	PG15-UG000121	Uganda	2012		genomic RNA		subtype: A	1	231	6P,11I,14P,15V,26A,27I,29D,54M,58V,71D,83M,87Q,96L,111P,120S,148V,154K,169F,178T,187D,200S,203R,207A,208G
MN790028	PG15-UG000123	Uganda	2013		genomic RNA		subtype: D	1	231	6L,14P,27I,41T,50G,83L,87Q,91V,96L,120A,128D,148V,178T,200A,225S
MN788933	PG15-UG000124	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,14T,15L,27I,41T,50S,83L,116A,124V,128D,148V,180D,207V,208G,225S
MN789122	PG15-UG000125	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,15L,30R,31G,54M,58I,83L,86A,91A,92P,98D,111P,120G,128D,148V,169F,171V,180D,183G,200S,207T,208G
MN789048	PG15-UG000128	Uganda	2013		genomic RNA		subtype: AG	1	231	6A,9H,11M,15L,26A,27I,30R,31G,54M,58I,71D,83L,87Q,92P,96I,111P,115V,116A,128D,148V,154K,169F,180D,187D,199R,200S,203R,207S,208G,225S,229K,230I
MN789992	PG15-UG000129	Uganda	2013		genomic RNA		subtype: D	1	231	6L,27I,41T,83T,87Q,91V,98D,110N,116A,120S,148V,180D,194S,225S
MN790084	PG15-UG000131	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,83L,110N,116A,148V,180D,230I
MN789799	PG15-UG000135	Uganda	2013		genomic RNA		subtype: AD	1	231	2V,3I,6A,11I,14N,15L,26A,27I,36I,45D,50Y,54M,58I,71D,83L,87Q,92P,96I,111P,116A,120S,128D,148V,154K,169F,171V,178T,183G,200S,203R,207T,208G,225S
MN789533	PG15-UG000137	Uganda	2013		genomic RNA		subtype: D	1	231	6L,15L,27I,41T,83L,91N,96L,110S,116A,120H,148V,154K,180D,225S
MN789875	PG15-UG000138	Uganda	2013		genomic RNA		subtype: D	1	231	6L,15L,27I,50G,54S,68I,83L,87Q,120S,139T,148V,154K,177G,183T,208G,225S
MN790179	PG15-UG000140	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11I,14S,15L,27I,54M,58I,71D,83T,92P,111I,120G,124V,128D,148V,154K,169F,171C,180D,187D,200S,203R,208G
MN788816	PG15-UG000142	Uganda	2013		genomic RNA		subtype: D	1	231	6L,15L,27I,33N,71D,120S,148V,180D,208Q,225S
MN789203	PG15-UG000143	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,12Y,14S,15L,27I,30R,31G,54M,58I,71D,83L,92P,111P,115L,120G,128D,148V,154K,169F,178T,183G,200S,203R,207T,208G
MN789953	PG15-UG000144	Uganda	2013		genomic RNA		subtype: AD	1	231	3M,6A,14P,15L,27I,29D,54M,58V,71D,86I,87Q,96I,98D,110N,111A,112N,116R,120G,128D,131R,148V,154K,169F,171I,178T,200S,203R,207T,208G
MN789985	PG15-UG000145	Uganda	2013		genomic RNA		subtype: A	1	231	6A,14V,15M,16M,27I,31G,48I,58I,71D,83L,91V,92P,111P,120S,128D,148V,154K,169F,178T,180D,187D,200S,203R,208G,225S
MN789495	PG15-UG000146	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,15M,27I,30R,50T,54M,58I,59I,71D,83L,87P,91H,92P,98D,116A,124V,128D,131R,148V,154K,169F,180D,183G,187D,191I,200S,203R,207A,208G
MN789210	PG15-UG000147	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11I,14S,15L,27I,41T,58V,71D,83L,91V,92P,111P,115V,120G,128D,148V,169F,178T,183G,200S,203R,207S,208G
MN789219	PG15-UG000148	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11I,14G,15M,27I,29D,54M,58I,71D,83L,111V,112P,115V,116A,120G,128D,131R,148V,154K,169F,171A,178T,180D,200S,203R,207A,208G
MN789269	PG15-UG000149	Uganda	2013		genomic RNA		subtype: AC	1	231	6P,11M,15L,31S,41T,50S,54V,58A,75D,83L,91V,96I,116A,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MN790069	PG15-UG000150	Uganda	2013		genomic RNA		subtype: AD	1	231	2V,3I,6A,11I,14N,15L,26A,27I,36I,45D,50Y,54M,58I,71D,83L,92P,96I,111P,116A,120G,128D,148V,154K,169F,178T,183G,200S,203R,207T,208G,230I
MN789206	PG15-UG000151	Uganda	2013		genomic RNA		subtype: AD	1	231	6V,27I,31G,33N,54M,58I,83L,87P,91V,96I,98D,111I,116A,128D,148V,154K,169F,171A,178T,183G,200A,203R,207T,208G,225S
MN790036	PG15-UG000152	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,83L,91V,116A,120S,148V,225S
MN790102	PG15-UG000153	Uganda	2013		genomic RNA		subtype: AD	1	231	2V,6A,15V,27I,54M,58I,71D,83L,111V,115V,116A,120G,123T,128D,131R,148V,154K,169F,180D,200N,203R,208G,225S,230I
MN789859	PG15-UG000154	Uganda	2013		genomic RNA		subtype: D	1	231	6L,27I,41T,83L,116N,120S,148V,154K,171V,180D,183S,207T,208G
MN789597	PG15-UG000155	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11I,14T,15M,27I,41T,50S,54L,58I,71D,83L,91V,92Q,116D,120G,128D,139H,148V,154K,169F,171V,178T,180D,187D,203R,207A,208G,216S
MN789285	PG15-UG000156	Uganda	2013		genomic RNA		subtype: A	1	231	6A,10W,11I,14S,15F,27I,29D,36I,54M,58I,71D,91V,92P,111P,120G,131R,148V,154K,169F,171C,178T,183G,191I,200S,203R,207A,208G,225S
MN789483	PG15-UG000157	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,14P,17A,27I,41T,83I,91N,120S,128D,148V,154K,178T
MN789576	PG15-UG000158	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,10L,11I,14T,15L,27I,54M,58I,71D,83L,87Q,91F,92P,96L,111P,116A,120H,128D,132K,148V,152E,154K,169F,171A,178T,180D,200S,203R,208G
MN788790	PG15-UG000159	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,14P,27I,41T,50A,83L,87Q,91V,98D,110N,113D,116R,120S,128D,148V,154K,180D,203R,208G,225S
MN789910	PG15-UG000161	Uganda	2013		genomic RNA		subtype: CD	1	231	6L,27I,41T,75D,92Q,96I,116T,120S,128D,148V,154K,169F,171A,178T,180D,199R,207A,208G,225S
MN789041	PG15-UG000164	Uganda	2013		genomic RNA		subtype: D	1	231	6L,14P,27I,41T,72V,115V,116A,120S,148V,180D
MN789293	PG15-UG000165	Uganda	2013		genomic RNA		subtype: D	1	231	6L,11M,14S,15L,27I,36I,41T,83I,87Q,91V,110S,120S,124V,148V,180D,225S,230I
MN789053	PG15-UG000166	Uganda	2013		genomic RNA		subtype: ACD	1	231	6L,15L,16T,27I,41T,50S,54S,71D,83L,87Q,91V,96I,116A,120S,124V,148V,154K,169F,178T,187D,207S,208G,225S
MN789318	PG15-UG000167	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,83L,116A,120S,148V,178T
MN789703	PG15-UG000169	Uganda	2013		genomic RNA		subtype: ACD	1	231	6L,27I,41T,50T,71D,91V,116A,120S,124V,135V,148V,169F,178T,180D,187D,208G
MN789233	PG15-UG000170	Uganda	2013		genomic RNA		subtype: ACD	1	231	6L,27I,41T,50G,83T,91N,92V,96L,120S,135V,148V,154K,180D,225S
MN789973	PG15-UG000173	Uganda	2013		genomic RNA		subtype: AD	1	231	6V,11T,12Y,14T,15L,26A,27I,54M,58I,59I,71D,83L,87Q,91F,92P,96L,111P,120G,148V,154K,169F,178T,191I,200S,203R,207A,208G
MN789816	PG15-UG000177	Uganda	2013		genomic RNA		subtype: D	1	231	6L,27I,41T,79D,83L,91N,96L,116Q,120S,148V,154K,178T,180D,183T,225S
MN790032	PG15-UG000178	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,31G,33N,83I,87Q,91V,115V,120S,148V,178T,208G,210N,225S
MN789593	PG15-UG000179	Uganda	2013		genomic RNA		subtype: D	1	231	6L,27I,29D,31N,41T,83L,116A,120S,135V,148V,180D
MN789938	PG15-UG000182	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,14N,15L,27I,45D,50H,54M,58I,83L,91V,111P,116A,120S,128D,148V,154K,163E,169F,171I,178T,183H,200S,207A,208G
MN788935	PG15-UG000183	Uganda	2013		genomic RNA		subtype: A1	1	231	2V,6A,11I,14P,15V,26A,27I,30R,31G,41A,54M,56M,58I,71D,83I,111T,116A,120G,128D,148V,154K,169F,180D,183S,200S,203R,207S,208G
MN789017	PG15-UG000184	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,41T,83L,91V,120S,123A,148V,180D,199R,200N,225S
MN788949	PG15-UG000185	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,15V,31G,54M,58I,71D,83L,92P,111P,120G,128D,148V,154K,169F,178T,180D,190M,191I,200S,207T,208G,225S
MN789815	PG15-UG000186	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,14P,15L,16T,27I,41T,83L,120S,148V,210S,225S
MN789259	PG15-UG000187	Uganda	2013		genomic RNA		subtype: D	1	231	6L,27I,41T,83L,87Q,120S,148V,180D,210S
MN789643	PG15-UG000189	Uganda	2013		genomic RNA		subtype: D	1	231	6L,14P,33N,41T,50S,54S,83L,91V,116A,120S,128D,148V,180D,210S,225S
MN789661	PG15-UG000191	Uganda	2013		genomic RNA		subtype: A	1	231	6A,27I,30R,31G,54M,58I,71D,78V,83L,92P,111P,128D,148V,154K,169F,183S,187D,200S,203R,207A,208G
MN789737	PG15-UG000192	Uganda	2013		genomic RNA		subtype: D	1	231	6L,31G,33N,83L,96L,116A,120H,148V,154K,180D,208G,225S
MN790043	PG15-UG000193	Uganda	2013		genomic RNA		subtype: ACD	1	231	6L,14P,27I,50T,83L,110N,116A,120S,128D,148V,180D
MN789561	PG15-UG000197	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,41T,83L,113D,116A,120A,148V,180D,208G
MN789974	PG15-UG000198	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,41T,75D,83T,86Q,87Q,91V,96L,116A,120H,128D,148V,180D
MN790152	PG15-UG000199	Uganda	2013		genomic RNA		subtype: A1	1	231	6A,11I,14T,15L,27I,54M,58I,71D,83L,111P,116A,120G,128D,148V,154K,169F,171C,179S,180D,200S,203R,207S,208G
MN788800	PG15-UG000201	Uganda	2013		genomic RNA		subtype: D	1	231	6L,15L,27I,83L,148V,180D,208G
MN790062	PG15-UG000204	Uganda	2013		genomic RNA		subtype: D	1	231	2V,6L,15L,27I,29D,68I,79D,83L,91V,111P,116A,120G,128D,148V,180D,225A
MN789422	PG15-UG000205	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,10P,11I,14P,15L,30R,31G,41A,54M,56M,58I,71D,83L,87Q,92P,96I,111T,116A,120S,128D,148V,154K,169F,180D,183G,200S,203R,207S,208G
MN790078	PG15-UG000207	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,15L,41A,50G,83L,91Q,96L,116A,132K,136I,139H,148V,180D,183T,208G
MN789421	PG15-UG000208	Uganda	2013		genomic RNA		subtype: AD	1	231	5S,6A,12Y,14P,15L,27I,54M,58V,71D,83L,92P,111A,115L,120G,128D,131R,148V,154K,169F,171V,178T,200S,203R,207V,208G
MN789278	PG15-UG000209	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11S,12Y,14S,15M,27I,54M,58I,71D,83L,86P,87Q,111P,115V,116A,120G,128D,148V,154K,169F,178T,183G,191I,203R,207A,208G
MN789448	PG15-UG000210	Uganda	2013		genomic RNA		subtype: D	1	231	2V,6L,11A,12Y,15L,27I,33N,50T,54I,71D,83T,91V,110N,116A,120S,148V,180D,225S
MN789044	PG15-UG000211	Uganda	2013		genomic RNA		subtype: AC	1	231	6A,11I,31G,48V,71D,83L,87Q,91V,128D,136M,148V,169F,178T,187D,203R,208G,210S
MN790066	PG15-UG000213	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,14N,27I,83L,87Q,91V,98D,120S,148V,180D,225S
MN788877	PG15-UG000214	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11I,27I,41T,83L,91V,110S,120S,148V,177C,178T,180D,191I,207V,208G,225S
MN789337	PG15-UG000216	Uganda	2013		genomic RNA		subtype: D	1	231	6L,27I,87Q,91V,116A,120S,148V,171I,180D
MN789854	PG15-UG000217	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11I,12Y,14T,15M,27I,29D,54M,58I,83L,111P,115L,116A,120S,128D,148V,154K,180D,191I,210S,225A
MN789885	PG15-UG000219	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11M,15L,27I,54M,58V,71D,87Q,92P,96L,111T,120G,131R,148V,154K,169F,171I,187D,200S,203R,208G
MN789830	PG15-UG000220	Uganda	2013		genomic RNA		subtype: D	1	231	6L,15L,27I,41T,75D,116A,120S,148V,180D
MN789149	PG15-UG000222	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,41A,83I,120S,125Q,148V,177C,180D,208G
MN789169	PG15-UG000223	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,41T,83L,91A,96L,116A,118I,123S,148V,180D,208G,225S
MN789415	PG15-UG000225	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11I,14P,15L,26A,27I,30R,31G,36I,45D,50G,54M,58I,71D,83L,87Q,92P,111P,116A,120H,128D,148V,154K,169F,171V,178T,183G,200S,203R,207S,208G
MN788932	PG15-UG000226	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,41T,50A,83I,87Q,120S,135V,148V,208G
MN790094	PG15-UG000229	Uganda	2013		genomic RNA		subtype: D	1	231	6L,14P,15L,27I,41T,83I,91V,120S,148V,154K,180D
MN788990	PG15-UG000230	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,41T,83L,91T,120S,128D,148V,154K,180D,225S
MN789870	PG15-UG000231	Uganda	2013		genomic RNA		subtype: ACD	1	231	6A,14S,15L,27I,54M,58V,71D,83L,91V,111P,116A,120G,128D,148V,154K,169F,177G,180D,187D,203R,208G
MN789390	PG15-UG000232	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,41T,83T,87Q,110S,116A,120S,124V,148V,183G,208G,225S
MN789759	PG15-UG000234	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,83L,87Q,91V,98D,115V,120S,148V,154K,180D,205M,208G,225S
MN788931	PG15-UG000235	Uganda	2012		genomic RNA		subtype: D	1	231	6L,14P,27I,41T,50S,83L,87Q,91L,116A,135V,148V,149N,170R,180D
MN789778	PG15-UG000237	Uganda	2013		genomic RNA		subtype: CD	1	231	6L,17A,27I,41T,71D,83L,87Q,91V,96I,116A,120S,124V,148V,154K,169F,178T,180D,187D,208G,210S
MN789438	PG15-UG000239	Uganda	2013		genomic RNA		subtype: D	1	231	6L,14P,16A,27I,41T,83L,87Q,96I,120S,135V,148V,180D
MN789004	PG15-UG000241	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,7ILV,9G,11I,12F,15L,27I,30R,31G,48I,54M,58I,71D,83L,91V,111P,115V,116A,120G,128D,148V,154K,169F,171V,180D,183G,200S,203R,207T,208G
MN789908	PG15-UG000242	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,83L,110N,148V,180D,225S
MN788883	PG15-UG000243	Uganda	2013		genomic RNA		subtype: ADG	1	231	6L,15L,27I,41T,50S,54S,83L,86A,87Q,120S,148V,180D,210S,225S
MN790024	PG15-UG000244	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,11A,15L,27I,54M,58V,71D,79D,83I,111I,116A,120G,128D,148V,154K,169F,174S,178T,180D,203R,207A,208G
MN788821	PG15-UG000246	Uganda	2013		genomic RNA		subtype: D	1	231	6L,14P,27I,41T,50G,71D,72V,83L,91P,111H,115L,116A,120S,124V,148V,154K,180D
MN789199	PG15-UG000250	Uganda	2013		genomic RNA		subtype: AD	1	231	3M,6A,11I,15L,26A,27I,30R,31G,36I,50G,54M,58I,71D,79D,83L,87Q,92P,96I,111P,120G,148V,153V,154K,169F,171I,177G,180D,203R,204G,207Q,208G
MN789775	PG15-UG000251	Uganda	2013		genomic RNA		subtype: D	1	231	6L,27I,41T,50G,83L,91V,120S,135V,148V,154K,180D
MN789868	PG15-UG000253	Uganda	2013		genomic RNA		subtype: AD	1	231	2V,3I,6A,11I,14N,15L,26A,27I,36I,45D,50Y,54M,58I,71D,83L,92P,96I,111P,116A,120S,128D,148V,154K,169F,171V,178T,180D,200S,203R,207T,208G
MN788948	PG15-UG000256	Uganda	2013		genomic RNA		subtype: D	1	231	6L,15M,31G,33K,44A,54S,68I,83L,107V,115V,116D,118T,120G,148V,178T,204S,208G,210S
MN789049	PG15-UG000257	Uganda	2013		genomic RNA		subtype: C	1	231	6L,14P,17A,27I,41T,71D,83L,96V,116T,120S,128D,148V,154K,169F,178T,203R,208G
MN789161	PG15-UG000258	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11I,12Y,15L,27I,33N,54M,58V,71D,83L,91V,92Q,111F,131R,148V,154K,180D,215L,230I
MN788749	PG15-UG000259	Uganda	2013		genomic RNA		subtype: A	1	231	6A,14G,15V,27I,31G,45D,48I,58I,71D,72A,79D,83T,92P,111P,118I,120G,148V,169F,180D,187D,200S,203R,208G
MN789427	PG15-UG000260	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,83L,91V,116A,120S,148V,180D,208G,225S
MN789915	PG15-UG000261	Uganda	2013		genomic RNA		subtype: D	1	231	6L,15L,16T,27I,41T,83L,87Q,91V,120S,148V,154K,160S,178T,199R
MN789692	PG15-UG000262	Uganda	2013		genomic RNA		subtype: D	1	231	6L,14S,15L,27I,83L,148V
MN789424	PG15-UG000263	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,14S,15L,27I,41T,83L,91A,110S,120S,148V,154K,180D,208G,210S
MN789688	PG15-UG000265	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,83I,91V,120S,148V,154K,171V,180D
MN789679	PG15-UG000268	Uganda	2013		genomic RNA		subtype: ACD	1	231	6A,11M,12Y,15L,54M,58V,71D,75D,83L,87Q,92P,96L,111G,115V,120G,128D,131R,148V,154K,169F,171A,178T,180D,200S,207T,208G
MN789672	PG15-UG000271	Uganda	2013		genomic RNA		subtype: A1	1	231	6V,11I,12Y,14H,15L,26A,30R,31G,54M,58I,71D,83L,111T,120S,128D,148V,154K,169F,171V,178T,183G,200S,203R,207S,208G,225S
MN789112	PG15-UG000272	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,15L,27I,30R,33RS,58A,83I,91N,96I,110N,116T,120S,148V,180D,225S
MN790141	PG15-UG000273	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11I,14P,15M,27I,54M,58I,61D,71D,83L,92P,111T,120S,128D,148V,154K,169F,180D,183G,191I,207T,208G,211V
MN789768	PG15-UG000274	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,10P,12Y,15L,27I,30R,54M,58I,71D,83L,87P,91V,96L,98D,111P,116A,120R,128D,148V,154K,169F,171A,180D,183G,203R,207A,208G
MN790116	PG15-UG000279	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,14S,15L,26A,27I,33N,36I,54M,58I,71D,83M,111P,116A,120G,128D,132K,138F,148V,153V,154K,169F,171V,178T,183G,200S,203R,207T,208G,225S
MN789396	PG15-UG000281	Uganda	2013		genomic RNA		subtype: D	1	231	6L,14P,15L,27I,83L,110N,116A,148V,180D,225S
MN789579	PG15-UG000282	Uganda	2013		genomic RNA		subtype: ACD	1	231	14P,17A,41T,71D,83L,86A,87Q,91V,96I,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,207Q,208G,210S,216A,225S
MN789118	PG15-UG000283	Uganda	2013		genomic RNA		subtype: D	1	231	6L,15L,27I,41T,86M,87P,91L,98D,116T,120S,148V,154K,178T,225S
MN788766	PG15-UG000284	Uganda	2013		genomic RNA		subtype: AD	1	231	2V,6L,27I,41T,50T,71D,116A,120S,148V,180D,225S
MN789135	PG15-UG000285	Uganda	2013		genomic RNA		subtype: AD	1	231	6V,15L,27I,50A,54M,58I,83L,141V,148V,180D,203R,208G,225S
MN789070	PG15-UG000286	Uganda	2013		genomic RNA		subtype: D	1	231	6L,27I,41T,50G,71D,83L,87Q,96I,116Q,120S,135V,148V,154K,170R,180D,191I,194S,208G,225S
MN789625	PG15-UG000288	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,15V,27I,30R,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,180D,183G,187D,200S,203R,208G,210S,225S,229K,230I
MN790193	PG15-UG000289	Uganda	2013		genomic RNA		subtype: D	1	231	6L,15L,27I,33N,41T,54S,83T,86M,87Q,116A,120S,148V,180D,208Q,225S
MN789064	PG15-UG000290	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,15L,27I,50S,75D,83L,116A,120G,128D,148V,180D,183T,225S
MN788927	PG15-UG000291	Uganda	2013		genomic RNA		subtype: D	1	231	6M,14P,15L,16T,27I,31N,41T,50N,83L,87Q,110N,115V,116A,120A,148V,180D,225S
MN789503	PG15-UG000292	Uganda	2014		genomic RNA		subtype: AD	1	231	3I,6A,9G,14P,15L,27I,48V,54M,58V,71D,83L,92P,110N,111V,116A,118I,120G,128D,131R,148V,154K,169F,178T,180D,200S,203R,207A,208G
MN789519	PG15-UG000293	Uganda	2014		genomic RNA		subtype: AD	1	231	6A,14T,15L,27I,31G,33N,47G,50H,54M,58V,71D,92P,110N,115V,120S,124V,128D,131R,148V,169F,178T,200A,203R,207T,208G
MN789162	PG15-UG000294	Uganda	2014		genomic RNA		subtype: A	1	231	6A,11M,12P,14P,15L,26A,27I,30R,31G,54M,58V,71D,83L,87Q,92P,111P,116A,120H,128D,148V,154K,169F,180D,200S,207T,208G
MN790118	PG15-UG000295	Uganda	2014		genomic RNA		subtype: AD	1	231	6A,13S,14P,15L,27I,30R,31G,54M,58I,71D,83L,92P,96I,110N,111V,113D,116A,120G,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G,210S
MN789360	PG15-UG000296	Uganda	2014		genomic RNA		subtype: A	1	231	6A,11M,15L,26A,27I,30R,31G,54M,58I,71D,83L,92P,111P,120G,123A,128D,148I,153V,154K,163E,169F,180D,200S,203R,207A,208G,225S
MN788806	PG15-UG000299	Uganda	2014		genomic RNA		subtype: D	1	231	6L,27I,41T,83L,91A,96V,120G,148V,180D,199R,210S
MN789027	PG15-UG000301	Uganda	2014		genomic RNA		subtype: A1	1	231	6A,15M,27I,44A,54M,58I,71D,83L,86A,91V,96I,111I,116A,128D,148V,154K,169F,171V,177G,178T,187D,190M,191I,200A,203R,208G
MN789960	PG15-UG000302	Uganda	2014		genomic RNA		subtype: AD	1	231	6L,14P,16A,17A,27I,41T,83L,87Q,91V,116A,120S,135V,148V,154K,178T,208G,210S,225S
MN788803	PG15-UG000303	Uganda	2014		genomic RNA		subtype: A1	1	231	6A,14N,27I,54M,58I,71D,83L,91V,115V,116A,120S,123A,128D,131R,148V,154K,169F,178T,180D,191I,200N,203R,207A,208G,225S,230I
MN790027	PG15-UG000304	Uganda	2014		genomic RNA		subtype: A1	1	231	2V,3I,6A,11I,14N,15L,26A,27I,36I,45D,50Y,54M,58I,71D,83L,87Q,92P,96I,111P,116A,128D,148V,154K,169F,178T,183G,200S,203R,207T,208G
MN788745	PG15-UG000305	Uganda	2014		genomic RNA		subtype: D	1	231	6L,50G,59I,83L,91P,120S,148V,180D,208G,225S,230I
MN789478	PG15-UG000307	Uganda	2014		genomic RNA		subtype: A	1	231	2V,6A,14N,15L,27I,54M,58I,71D,92P,107V,111S,120S,132K,139H,148V,154K,178T,200S,204S,207I,208G,225S
MN788823	PG15-UG000308	Uganda	2014		genomic RNA		subtype: AD	1	231	6L,27I,50T,54I,83L,116Q,120S,128D,148V,154K,180D,225S
MN789873	PG15-UG000309	Uganda	2014		genomic RNA		subtype: AD	1	231	6L,14T,15L,27I,50T,79D,83L,91V,96I,116A,120S,148V,154K,180D,208G
MN788976	PG15-UG000312	Uganda	2014		genomic RNA		subtype: D	1	231	6L,11I,15L,27I,41T,50S,83L,87Q,91V,120S,128D,148V,154K,180D,208G,210S
MN789193	PG15-UG000313	Uganda	2014		genomic RNA		subtype: AD	1	231	6L,14P,15L,16T,27I,31N,83L,116N,120G,121Q,148V,180D,225S
MN789920	PG15-UG000315	Uganda	2014		genomic RNA		subtype: D	1	231	6L,27I,33N,36I,50S,54S,71D,83M,87Q,91V,96I,98D,116R,120S,128D,148V,154K,160T,177G,208G
MN788822	PG15-UG000316	Uganda	2014		genomic RNA		subtype: AD	1	231	6A,11A,15L,27I,54M,58V,71D,83L,92P,110S,111V,116A,118I,120S,124V,128D,131R,148V,154K,169F,178T,180D,203R,208G
MN789783	PG15-UG000317	Uganda	2014		genomic RNA		subtype: D	1	231	6L,83L,87Q,91V,96L,120H,148V,180D,183S
MN789851	PG15-UG000319	Uganda	2014		genomic RNA		subtype: A	1	231	6A,11I,15L,31G,33N,54M,58I,71D,83L,87Q,92P,111I,120G,128D,148V,154K,169F,178T,183G,203R,204S,207T,208G
MN789264	PG15-UG000320	Uganda	2013		genomic RNA		subtype: ACD	1	231	6A,11I,15V,27I,54M,58I,71D,83L,87Q,91V,96I,98D,110N,111I,116A,120G,128D,148V,154K,169F,178T,183G,203R,207A,208G
MN788890	PG15-UG000321	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,15V,27I,54M,58I,71D,83L,87P,92P,96L,111M,120R,128D,148V,154K,169F,171I,183G,187D,200S,203R,208G
MN789014	PG15-UG000322	Uganda	2014		genomic RNA		subtype: AD	1	231	6L,14P,15L,16T,27I,31N,41T,75D,83L,116N,120S,148V,180D,215L,225S
MN789094	PG15-UG000326	Uganda	2007		genomic RNA		subtype: D	1	231	2V,3I,6L,11T,12Y,14S,15L,27I,41T,83L,87Q,91V,110N,120S,148V,152E,171I,180D,191I,208G,225S
MN788896	PG15-UG000327	Uganda	2007		genomic RNA		subtype: A1	1	231	6A,15V,27I,50V,54L,58I,71D,83L,87Q,91V,92P,110N,120S,128D,131R,148V,153V,154K,169F,171V,180D,183G,187D,191I,203R,207A,208G
MN788906	PG15-UG000328	Uganda	2008		genomic RNA		subtype: A	1	231	6A,11I,14C,15L,27I,54S,58V,71D,83L,86I,87Q,111P,115V,116A,120G,128D,139H,148V,154K,169F,178T,187D,200S,203R,208G
MN790129	PG15-UG000329	Uganda	2007		genomic RNA		subtype: A	1	231	6A,11I,14P,15L,30R,31G,54M,58I,71D,79D,83L,87Q,92P,96I,111P,116A,118I,120G,124F,128D,148V,154K,169F,180D,183G,191I,200S,203R,207Q,208G,210S
MN789371	PG15-UG000332	Uganda	2009		genomic RNA		subtype: D	1	231	6L,27I,41T,78V,83L,120S,148V,154K,180D,183T
MN788908	PG15-UG000333	Uganda	2009		genomic RNA		subtype: ACD	1	231	6H,27I,41T,50G,71D,83T,87P,91L,92P,96L,98D,116T,120G,135V,148V,154K,169F,178T,180D,187D,203R,208G,225S
MN789762	PG15-UG000334	Uganda	2009		genomic RNA		subtype: ACD	1	231	6A,11I,15L,26A,27I,30R,31G,54M,58I,71D,79D,83L,92P,111P,116A,120G,128D,148V,154K,169F,180D,200S,203R,207A,208G
MN789366	PG15-UG000336	Uganda	2007		genomic RNA		subtype: AD	1	231	6L,27I,83L,91A,120S,148V,183G,208G,225S,230I
MN789552	PG15-UG000337	Uganda	2009		genomic RNA		subtype: A	1	231	6V,11I,14N,15L,27I,54M,58V,71D,83L,86I,111I,116A,120G,123A,128D,148V,154K,169F,171I,187D,200S,208G,225S
MN789824	PG15-UG000338	Uganda	2008		genomic RNA		subtype: AD	1	231	6L,31G,33N,41T,83L,91N,107S,116A,120S,135V,148V,154K,179A,180D,183S,210S,225S
MN789113	PG15-UG000339	Uganda	2009		genomic RNA		subtype: AD	1	231	6A,14G,15L,27I,31G,33N,50G,52I,54M,56M,58I,71D,83L,87P,91L,92P,96L,111P,115V,116A,120S,128D,148V,154K,169F,178T,183G,200S,203R,208G
MN788852	PG15-UG000340	Uganda	2009		genomic RNA		subtype: A1	1	231	6A,11A,15L,27I,30R,31G,54M,58I,71D,79D,83L,91A,92P,96I,111P,120G,148V,153V,154K,169F,178T,183G,200S,207S,208G
MN789089	PG15-UG000341	Uganda	2007		genomic RNA		subtype: AD	1	231	2V,6T,12Y,14S,16T,27I,44A,83L,87Q,91V,121T,148V,180D,199R,208G
MN789912	PG15-UG000342	Uganda	2007		genomic RNA		subtype: D	1	231	6L,15L,27I,83L,148V,180D,225S
MN789878	PG15-UG000343	Uganda	2007		genomic RNA		subtype: A1	1	231	6A,11I,14S,15L,27I,41T,54M,58I,71D,83L,87Q,91V,96I,111M,116A,120S,128D,148V,154K,169F,170R,178T,191I,200S,203R,208G,225S
MN789699	PG15-UG000346	Uganda	2007		genomic RNA		subtype: D	1	231	6L,15L,27I,41T,83T,87Q,110N,116A,148V,180D,208G,225S
MN789954	PG15-UG000350	Uganda	2008		genomic RNA		subtype: A1	1	231	6A,11I,13N,14P,15L,27I,54M,58I,71D,83M,111T,116A,120A,148V,154K,169F,171A,178T,183H,203R,204G,207Q,208G
MN790166	PG15-UG000351	Uganda	2008		genomic RNA		subtype: AD	1	231	6A,11T,12L,14I,15L,54M,58I,71D,83L,92P,111P,115L,116A,120S,128D,148V,154K,165G,166KN,167T,169F,178T,200S,203R,207T,208G,225S
MN789693	PG15-UG000353	Uganda	2007		genomic RNA		subtype: AD	1	231	6L,15L,27I,83L,91A,110N,116A,120S,148V,174T,183G,207S,208G
MN789413	PG15-UG000354	Uganda	2008		genomic RNA		subtype: D	1	231	6L,15V,27I,36I,41T,50H,91V,110N,116A,120S,124V,132K,148V,154K,180D,191I,203R,208G,225S
MN789001	PG15-UG000356	Uganda	2008		genomic RNA		subtype: A1	1	231	6A,11I,14S,15L,27I,54M,58I,71D,83L,91V,111P,116A,120G,128D,148V,154K,169F,178T,181I,187D,200S,203R,207T,208G
MN788850	PG15-UG000358	Uganda	2008		genomic RNA		subtype: A	1	231	6A,11I,14N,27I,54M,58I,71D,111I,116A,120S,128D,148V,154K,169F,178T,183G,187D,191I,200S,203R,208G
MN788817	PG15-UG000359	Uganda	2009		genomic RNA		subtype: A	1	231	6A,11T,12F,15L,27I,30R,31G,54M,58I,71D,79D,83L,87Q,92P,111P,120S,148V,154K,169F,178T,183G,200S,203R,207S,208G,225S
MN789937	PG15-UG000360	Uganda	2008		genomic RNA		subtype: AD	1	231	6A,14G,15L,27I,31G,33N,50G,52I,54M,56M,58I,71D,83L,87P,91L,92P,96L,111P,116A,128D,148V,154K,169F,178T,183G,200S,203R,207T,208G
MN789006	PG15-UG000364	Uganda	2009		genomic RNA		subtype: AD	1	231	6A,14P,27I,31S,41T,54M,58I,71D,87Q,92P,96L,110N,120S,135V,148V,169F,178T,187D,200S,203R,208G
MN789154	PG15-UG000365	Uganda	2009		genomic RNA		subtype: A	1	231	6A,14S,15L,27I,30R,36I,54M,58I,71D,87Q,92P,96I,111I,116R,120S,128D,132K,138F,148V,154K,169F,178T,183G,200S,203R,208G,210S
MN789991	PG15-UG000368	Uganda	2009		genomic RNA		subtype: D	1	231	6L,27I,83L,116A,120S,148V,225S
MN789691	PG15-UG000369	Uganda	2008		genomic RNA		subtype: AD	1	231	6L,27I,50A,83L,91V,120S,148V,180D,225S,230I
MN788858	PG15-UG000370	Uganda	2008		genomic RNA		subtype: AD	1	231	6L,14C,15L,27I,83L,91A,120S,148V,180D,225S
MN788836	PG15-UG000371	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,14P,27I,33N,44A,54L,79D,83T,86A,87Q,91V,96I,98D,116T,120S,148V,171V,180D,225S
MN790177	PG15-UG000372	Uganda	2009		genomic RNA		subtype: A	1	231	6A,11T,14S,15L,27I,54M,58I,59I,71D,83L,87Q,92P,96L,111S,112H,120G,128D,148V,153V,154K,169F,171I,178T,183G,187D,203R,208G
MN789045	PG15-UG000373	Uganda	2009		genomic RNA		subtype: C	1	231	6L,33N,41T,50S,54A,71D,83L,116A,120S,128D,148V,169F,178T,203R,208G
MN789334	PG15-UG000375	Uganda	2009		genomic RNA		subtype: AD	1	231	2V,6L,13N,14P,27I,31G,33N,41T,50G,83L,87Q,96I,110S,111T,116A,120G,135V,148V,187D,199R,225S
MN790184	PG15-UG000377	Uganda	2008		genomic RNA		subtype: D	1	231	6L,15L,27I,83L,91V,110N,116A,120S,148V,180D,225S
MN789143	PG15-UG000378	Uganda	2008		genomic RNA		subtype: A1	1	231	6A,11I,15V,16T,27I,30R,50G,54M,58I,71D,83L,96I,111T,116A,120G,128D,148V,154K,169F,171C,178T,183G,204S,207S,208G
MN789826	PG15-UG000379	Uganda	2009		genomic RNA		subtype: A	1	231	2V,3I,6A,14P,15V,27I,30R,31G,54M,58I,71D,79D,83L,86A,87Q,96I,110N,111V,116T,120G,148V,154K,169F,178T,183G,200G,203R,207S,208G,210S,225S
MN789740	PG15-UG000380	Uganda	2009		genomic RNA		subtype: C	1	231	6L,27I,41T,71D,83L,116A,120G,124V,128D,136M,148V,154K,169F,178T,183G,187D,203R,208G,225S
MN789301	PG15-UG000381	Uganda	2009		genomic RNA		subtype: AD	1	231	6A,11I,14P,15L,27I,31G,33N,50G,54M,58I,71D,83L,92P,96I,111P,116A,120S,128D,148V,154K,169F,171A,178T,180D,200S,203R,207T,208G
MN788833	PG15-UG000382	Uganda	2008		genomic RNA		subtype: AG	1	231	6A,11I,12Y,15V,31G,54M,58I,71D,83L,92P,111T,120G,123A,128D,148V,154K,169F,178T,183G,200S,203R,207T,208G,225S
MN789466	PG15-UG000384	Uganda	2009		genomic RNA		subtype: D	1	231	6L,15L,83L,91V,116A,148V,170R,180D,199R,205M,208G,210S
MN788950	PG15-UG000385	Uganda	2014		genomic RNA		subtype: A	1	231	6A,11I,15V,27I,31G,44A,47T,54V,58I,71D,83L,92P,96L,111I,128D,148V,154K,169F,178T,180D,200S,203R,207S,208G,225S
MN789955	PG15-UG000386	Uganda	2009		genomic RNA		subtype: A	1	231	6A,27I,54M,58I,71D,78G,83L,92P,111I,116A,120G,128D,148V,154K,169F,171A,178T,180D,187D,200S,207T,208G
MN789281	PG15-UG000387	Uganda	2008		genomic RNA		subtype: AD	1	231	6A,14P,15M,27I,29D,31S,54M,58I,79D,83M,91V,110N,116N,120G,148V,154K,180D,200S,225S
MN789068	PG15-UG000388	Uganda	2009		genomic RNA		subtype: AD	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,120S,128D,148V,154K,169F,171V,180D,187D,203R,207T,208G
MN788740	PG15-UG000389	Uganda	2008		genomic RNA		subtype: A1	1	231	6A,11I,15V,27I,54M,58I,71D,83I,86I,87Q,111P,116A,120A,128D,148V,154K,169F,171A,178T,183H,200S,207T,208G
MN789820	PG15-UG000391	Uganda	2009		genomic RNA		subtype: D	1	231	6L,27I,41T,44A,83L,91V,116A,120S,148V,180D,194S,208G,225S
MN789568	PG15-UG000392	Uganda	2009		genomic RNA		subtype: AD	1	231	3I,6A,11I,13N,14P,15M,31G,54M,58I,71D,79D,83L,86A,91V,92Q,96I,111T,116A,120S,148V,154K,169F,178T,180D,191I,200S,203R,207A,208G
MN789077	PG15-UG000393	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,14P,15L,16T,27I,41T,83L,91V,110N,120S,148V,180D,210S,225S
MN790160	PG15-UG000395	Uganda	2008		genomic RNA		subtype: A	1	231	6A,11I,12Y,14G,15M,27I,30R,31G,54M,58I,71D,83L,87Q,92P,96I,111T,116A,120G,123R,128D,129L,148V,153V,154K,169F,171I,178T,183G,200A,203R,204G,207T,208G,210S,225S
MN789481	PG15-UG000396	Uganda	2008		genomic RNA		subtype: A	1	231	6A,11T,14N,15L,27I,54M,58I,71D,91V,111I,116A,120S,128D,148V,154K,169F,171V,178T,180D,200S,207T,208G
MN789282	PG15-UG000397	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,11I,27I,45D,54S,58A,71D,83I,91V,120S,148V,178T,180D
MN789924	PG15-UG000398	Uganda	2009		genomic RNA		subtype: ACD	1	231	6A,11I,15L,26A,27I,30R,31G,54M,58I,71D,79D,83L,92P,111P,116A,120G,128D,148V,154K,169F,180D,200S,203R,207A,208G
MN789497	PG15-UG000401	Uganda	2009		genomic RNA		subtype: AD	1	231	6A,15V,27I,50G,54M,58I,71D,83L,111P,116A,120G,128D,148V,154K,169F,178T,183G,187D,200S,203R,207A,208G,225S
MN789904	PG15-UG000402	Uganda	2009		genomic RNA		subtype: A	1	231	2V,6A,11I,14S,15F,27I,30R,31G,54M,58I,71D,83L,92P,111P,115V,128D,148V,153V,154K,169F,171V,180D,183G,200S,203R,207A,208G,210S
MN789749	PG15-UG000403	Uganda	2009		genomic RNA		subtype: AD	1	231	6A,11T,12Y,15L,30R,31G,33N,54M,58I,71D,79D,83L,87Q,92P,107S,111P,120S,148V,154K,169F,171A,178T,183G,200S,203R,208G,210N
MN789948	PG15-UG000404	Uganda	2009		genomic RNA		subtype: AD	1	231	6L,15L,27I,36I,41T,83L,86A,87Q,91V,98D,110N,120S,148V,180D,208G,210S,225S
MN789311	PG15-UG000405	Uganda	2008		genomic RNA		subtype: A	1	231	6A,11I,15V,27I,54M,58I,71D,83L,91V,96L,111P,116A,120A,128D,148V,154K,169F,178T,183G,191I,203R,207A,208G,225S
MN788978	PG15-UG000406	Uganda	2009		genomic RNA		subtype: A	1	231	6A,11M,14N,15L,27I,54M,58I,71D,83L,91V,111P,116A,120A,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G
MN789352	PG15-UG000407	Uganda	2009		genomic RNA		subtype: A	1	231	2V,6A,14S,15L,27I,50G,54M,58V,68I,71D,78V,83L,92P,111P,120S,128D,131R,148V,169F,178T,191I,200S,203R,208G,225S
MN789201	PG15-UG000408	Uganda	2007		genomic RNA		subtype: AG	1	231	6A,11I,14P,15L,30R,31G,54M,58I,71D,79D,83L,87Q,92P,96I,111P,116A,118I,120G,124F,128D,148V,154K,169F,180D,183G,191I,200S,203R,207Q,208G,210S
MN788873	PG15-UG000410	Uganda	2007		genomic RNA		subtype: AD	1	231	3L,6A,12Y,15L,27I,41T,83L,91N,120S,148V,180D,207V,208G
MN790015	PG15-UG000412	Uganda	2015		genomic RNA		subtype: D	1	231	6L,14P,15L,27I,30R,41L,44A,69I,71D,83T,110N,116A,148V,154K,169F,171A,177G,180D,200S,208G,210S,225S
MN789933	PG15-UG000414	Uganda	2015		genomic RNA		subtype: AD	1	231	2V,6M,14P,27I,41T,50S,83L,87Q,91V,96I,110S,116T,120S,128D,148V,154K,171V,180D,210S,225S
MN789451	PG15-UG000421	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11T,12Y,13N,14P,15P,27I,30R,31G,54M,58I,71D,83L,87Q,91F,92P,111V,120S,128D,148V,154K,169F,180D,183G,187D,191I,203R,207S,208G,225A
MN789886	PG15-UG000422	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,15L,27I,33N,83L,91N,96L,120S,148V,208G,225S
MN789702	PG15-UG000444	Uganda	2015		genomic RNA		subtype: D	1	231	6L,15V,27I,54S,83L,91V,116N,120G,148V,183S,208G
MN789946	PG15-UG000454	Uganda	2014		genomic RNA		subtype: A	1	231	6A,10P,11M,12Y,13V,15V,27I,30R,54M,58I,71D,83L,87Q,92P,96L,111P,120G,128D,148V,154K,169F,171A,178T,183G,200G,203R,207T,208G,225S
MN789287	PG15-UG000456	Uganda	2014		genomic RNA		subtype: AD	1	231	6A,10P,14P,16T,27I,41T,83L,91V,116A,120G,148V,154K,160T,208G,210S,225S
MN789949	PG15-UG000459	Uganda	2014		genomic RNA		subtype: D	1	231	6M,27I,41T,83L,91Q,98D,115V,116A,120S,148V,180D,225S
MN789389	PG15-UG000462	Uganda	2014		genomic RNA		subtype: D	1	231	2V,6L,11A,12Y,14C,15L,27I,33N,36I,83L,91N,116A,120S,124V,148V,225S
MN789132	PG15-UG000463	Uganda	2014		genomic RNA		subtype: AD	1	231	6A,9H,11I,15L,26A,27I,30R,31G,36I,54M,58I,83L,87Q,91V,111T,120H,128D,148V,154K,169F,171A,178T,183G,203R,204G,207T,208G
MN789872	PG15-UG000464	Uganda	2014		genomic RNA		subtype: AD	1	231	6L,27I,50A,79D,83L,91V,120S,148V,154K,183S,208G
MN789891	PG15-UG000465	Uganda	2014		genomic RNA		subtype: AD	1	231	6L,27I,41T,50A,83L,91H,110N,116A,120S,135V,148V,199R
MN789104	PG15-UG000467	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,41T,83L,91V,110N,116A,120S,148V,180D,225S
MN789327	PG15-UG000468	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,11T,14S,15L,27I,41T,54M,58I,79D,83L,116T,120S,148V,180D,207T,208G,225S
MN789648	PG15-UG000469	Uganda	2015		genomic RNA		subtype: A	1	231	6V,15M,27I,31G,33N,54M,58I,75D,83L,86A,87Q,91V,96I,98D,111I,115V,116A,120S,128D,148V,154K,169F,171A,178T,183G,200A,203R,207T,208G,225S
MN789999	PG15-UG000472	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,27I,41T,83T,91A,148V,180D
MN790019	PG15-UG000473	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,14P,15F,27I,30R,31G,54M,58I,71D,86A,111P,116A,118I,120G,128D,148V,154K,169F,180D,183G,187D,191I,200S,203R,208G,210S,225S
MN789238	PG15-UG000476	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,11I,14T,15L,27I,54M,58I,71D,83L,91V,111P,116A,120S,128D,148V,154K,169F,178T,183G,191I,200S,207T,208G,210S
MN789728	PG15-UG000477	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,11I,12Y,15M,27I,44A,54M,58I,71D,83L,87Q,92P,96L,110N,111P,120G,148V,154K,169F,171V,180D,187D,203R,207A,208G,225S
MN789862	PG15-UG000479	Uganda	2015		genomic RNA		subtype: A	1	231	2V,5S,6A,11I,12F,15L,27I,30R,31G,48A,54M,58I,71D,83L,87Q,92P,96I,111P,116A,120G,148V,153V,154K,169F,171I,178T,183G,200S,203R,207T,208G,210S
MN789793	PG15-UG000482	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,15V,27I,54M,58I,71D,83I,91V,111P,116A,120G,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G,225S
MN788844	PG15-UG000486	Uganda	2015		genomic RNA		subtype: D	1	231	6L,27I,83L,91A,120S,148V,180D,183T
MN788794	PG15-UG000488	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,15L,16T,26A,27I,30R,31G,33Q,36I,54M,58V,71D,79D,83L,87Q,92P,111P,148V,154K,169F,177C,178T,183G,200S,203R,207S,208G,225S
MN789365	PG15-UG000491	Uganda	2012		genomic RNA		subtype: A2D	1	231	6A,10W,41T,50S,54S,59I,71D,92P,110N,120S,148V,169F,178T,180D,187D,203R,208G,210S,225S
MN789309	PG15-UG000492	Uganda	2012		genomic RNA		subtype: A1	1	231	6A,11I,14S,15L,27I,54L,58I,71D,75D,92P,96I,111I,116Q,120G,128D,148V,154K,169F,171C,178T,183G,191I,200S,203R,207T,208G,211I
MN789734	PG15-UG000493	Uganda	2012		genomic RNA		subtype: A	1	231	6T,12Y,15M,27I,54M,58I,71D,79D,83L,92P,111P,120G,148V,154K,169F,171A,178T,183G,200S,203R,207T,208G
MN789639	PG15-UG000494	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,27I,83L,116A,120S,148V,180D,194S,225S
MN788828	PG15-UG000495	Uganda	2012		genomic RNA		subtype: A1	1	231	6V,11I,15L,27I,54M,58I,71D,83I,87Q,91V,96I,111I,116T,120S,148V,154K,169F,171A,178T,183G,200S,207T,208G
MN789498	PG15-UG000496	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,10Y,11T,15V,27I,30R,31G,54M,58I,71D,83L,86I,92P,96I,111M,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G
MN789200	PG15-UG000497	Uganda	2012		genomic RNA		subtype: CD	1	231	6L,14P,27I,41T,71D,83L,91V,110N,116A,120G,124V,128D,148V,154K,169F,178T,180D,203R,208G,225S
MN788905	PG15-UG000501	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14P,27I,83L,87Q,91V,96I,110N,116A,120H,148V,154K,177G,208G,225S,230I
MN789855	PG15-UG000505	Uganda	2012		genomic RNA		subtype: A	1	231	2V,6A,11I,14S,15L,27I,31G,33N,50S,58V,71D,79D,83L,91V,107S,111P,115V,116A,120G,128D,148V,154K,169F,171A,180D,187D,204G,207M,208G,225S
MN789798	PG15-UG000506	Uganda	2012		genomic RNA		subtype: AD	1	231	4R,6L,10W,11T,27I,116D,120H,148V,180D,199R,225S
MN789689	PG15-UG000508	Uganda	2012		genomic RNA		subtype: A	1	231	6A,9H,14P,15L,26A,27I,30R,31G,50G,54M,58I,71D,83L,87Q,92P,111P,120S,128D,148V,154K,169F,183G,187A,203R,204G,207T,208G,225S
MN789884	PG15-UG000509	Uganda	2012		genomic RNA		subtype: AD	1	231	6M,27I,41T,47C,83M,116A,120G,124V,128D,135V,136I,148V,180D,208G,225S
MN789457	PG15-UG000510	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11T,14S,15L,27I,30R,50S,54M,58I,71D,83L,86A,87Q,92P,96L,111P,120S,128D,148V,154K,169F,171A,180D,183G,200S,204S,207T,208G,225S
MN789566	PG15-UG000512	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11T,14P,15L,26A,27I,30R,50A,54M,58V,83L,111T,112P,116A,120G,128D,148V,154K,169F,171C,178T,183G,187D,191I,200S,207A,208G,225S
MN789479	PG15-UG000513	Uganda	2012		genomic RNA		subtype: A2D	1	231	6A,10W,33N,54L,79D,83T,87Q,91V,116A,120S,148V,171V,178T,180D,200S,208G,210S,225S
MN790008	PG15-UG000514	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,27I,41T,83M,87Q,110S,120S,124V,148V,180D,208G
MN789420	PG15-UG000516	Uganda	2012		genomic RNA		subtype: D	1	231	6L,14P,15L,27I,83M,91V,96L,115V,120S,148V,225S
MN789363	PG15-UG000517	Uganda	2012		genomic RNA		subtype: D	1	231	6L,15L,27I,44A,50G,83L,86A,87Q,91V,96I,116T,120S,148V,154K,160T,180D,225S
MN789042	PG15-UG000518	Uganda	2012		genomic RNA		subtype: A	1	231	6A,15V,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,183G,200S,203R,208G,225S,230I
MN789452	PG15-UG000521	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14S,15L,27I,83L,91A,110S,120S,148V,178T,201L,225S
MN790169	PG15-UG000524	Uganda	2012		genomic RNA		subtype: A	1	231	2V,6A,11I,15L,26A,27I,30R,31G,50S,54M,58I,71D,79D,83L,87Q,92P,111P,116A,120S,148V,154K,169F,178T,181I,187D,200S,203R,207S,208G,230I
MN789291	PG15-UG000526	Uganda	2012		genomic RNA		subtype: C	1	231	6L,15L,41T,50S,54S,58A,71D,83L,91V,116A,118A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MN788955	PG15-UG000528	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,14P,15V,26A,30R,31G,50S,54M,58I,75D,83L,86A,91F,92Q,96L,115V,116T,120G,128D,131R,148V,154K,169F,178T,180D,200S,203R,207S,208G
MN789304	PG15-UG000529	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,14N,15L,27I,54M,58I,71D,83L,86P,87Q,96I,98D,111P,116A,120G,128D,148V,153V,154K,169F,171I,178T,183G,191I,200S,203R,204G,207H,208G
MN790195	PG15-UG000530	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14P,16T,27I,71D,83L,96L,110N,120S,148V,154K,177G,208G,210N,225S
MN788971	PG15-UG000532	Uganda	2012		genomic RNA		subtype: D	1	231	6L,27I,41T,50A,71D,83L,87Q,91V,120S,128D,148V,154K,178T,180D,191I,194T,208G,225S
MN790139	PG15-UG000533	Uganda	2012		genomic RNA		subtype: D	1	231	6M,27I,41T,50G,83L,87Q,91V,120S,135V,148V,154K,180D,225S
MN789608	PG15-UG000534	Uganda	2012		genomic RNA		subtype: AC	1	231	14S,15L,27I,41T,71D,83T,91A,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S
MN788831	PG15-UG000536	Uganda	2012		genomic RNA		subtype: A	1	231	6A,14N,15L,27I,50G,54M,58I,61D,83T,91L,92P,96L,98D,107A,111P,115L,116A,120G,124V,128D,131R,148V,154K,169F,171A,178T,183G,203R,204G,208G
MN790165	PG15-UG000537	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,11I,14P,15M,27I,50G,54M,58I,71D,91V,110N,111I,115L,116A,120A,128D,131R,148V,154K,169F,178T,183G,187D,191I,200S,203R,208G
MN789060	PG15-UG000540	Uganda	2012		genomic RNA		subtype: AC	1	231	6A,11T,14S,15L,27I,48I,54M,58I,71D,83L,92P,111P,120G,128D,148V,153V,154K,169F,171I,180D,183G,187D,191I,200S,203R,208G,210S
MN788977	PG15-UG000544	Uganda	2012		genomic RNA		subtype: A	1	231	6A,10Y,11I,15V,27I,30R,31G,54M,58I,71D,83L,110N,111I,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G,225S
MN790039	PG15-UG000545	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,83L,86A,87Q,91V,98D,110S,120S,148V,180D,225S
MN790147	PG15-UG000546	Uganda	2012		genomic RNA		subtype: D	1	231	6L,15L,27I,36I,83L,91V,148V,154K,177C,178T,225S
MN789430	PG15-UG000548	Uganda	2012		genomic RNA		subtype: A	1	231	6A,15V,16T,27I,41T,54L,58I,71D,83M,91V,96I,111I,116A,118I,120G,148V,154K,169F,177C,178T,180D,183G,203R,207A,208G,210S,225S
MN789719	PG15-UG000550	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,15L,26A,36I,41L,54M,58I,71D,83L,86T,92Q,111P,116A,118I,120G,123S,128D,132K,148V,169F,178T,203R,208G
MN789486	PG15-UG000552	Uganda	2012		genomic RNA		subtype: D	1	231	6L,27I,41T,50G,59I,71D,83L,87Q,120S,135V,148V,154K,178T,225S
MN789811	PG15-UG000553	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,10W,15L,33N,71D,83L,116A,120G,148V,178T,187D,200S,208G,225S
MN789592	PG15-UG000554	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,14N,15L,27I,54M,58I,71D,83L,86I,111P,116A,120A,128D,148V,154K,169F,178T,183G,191I,200S,203R,207A,208G,225S
MN789834	PG15-UG000556	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,11I,15L,27I,54M,58I,71D,82K,83L,92P,111P,116A,148V,154K,169F,171A,178T,183G,187D,200S,207T,208G
MN788842	PG15-UG000557	Uganda	2012		genomic RNA		subtype: AC	1	231	6A,12Y,14S,15L,27I,54M,58V,71D,91V,92P,111P,118I,120G,124V,139H,148V,154K,169F,178T,180D,200S,203R,208G,210S,225S
MN789230	PG15-UG000560	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,15V,27I,54L,58I,71D,83L,87Q,92P,96I,111I,116A,120G,123A,128D,148V,154K,169F,174S,180D,183G,187D,191I,200S,203R,207T,208G
MN788923	PG15-UG000562	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,14T,15L,27I,54M,58I,75D,83L,111P,116A,120G,128D,148V,154K,169F,178T,180D,200S,203R,208G
MN789849	PG15-UG000564	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,11I,12Y,14N,15M,27I,54M,58I,71D,83L,111P,115V,116A,120S,128D,148V,153V,154K,169F,171I,178T,183G,187D,191I,200S,203R,204G,207Q,208G,225S
MN789523	PG15-UG000565	Uganda	2012		genomic RNA		subtype: A	1	231	6A,15V,31G,54M,58I,71D,83L,92P,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MN789701	PG15-UG000566	Uganda	2012		genomic RNA		subtype: A	1	231	5G,6A,9HQ,10X,11M,12Y,14S,15V,27I,30R,31G,54M,58I,71D,83L,87Q,92P,111P,120S,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G
MN788985	PG15-UG000568	Uganda	2012		genomic RNA		subtype: D	1	231	6L,15L,27I,50T,83L,86P,87Q,91V,120S,148V,180D,208G,225S
MN789125	PG15-UG000569	Uganda	2012		genomic RNA		subtype: AC	1	231	6V,15L,27I,30R,31G,54M,58I,59I,71D,79D,83L,92P,111P,118I,120S,148V,154K,169F,178T,183G,200S,203R,208G,210S
MN789620	PG15-UG000570	Uganda	2012		genomic RNA		subtype: A1	1	231	6A,10L,14S,15L,27I,54M,58I,68I,71D,83L,87Q,92P,111P,116A,120S,128D,129L,132K,148V,154K,169F,171V,178T,183G,187D,200S,203R,208G,210S
MN789134	PG15-UG000572	Uganda	2012		genomic RNA		subtype: A1	1	231	6A,11I,15V,30R,31G,54M,58I,59I,71D,78V,83L,92P,111P,120S,128D,148V,154K,169F,180D,183S,200S,203R,207A,208G,210S
MN788867	PG15-UG000573	Uganda	2012		genomic RNA		subtype: A1	1	231	6A,11I,14S,15L,27I,54M,58I,71D,92P,111I,120S,124V,128D,148V,154K,169F,178T,183G,191I,200S,203R,208G
MN789601	PG15-UG000574	Uganda	2012		genomic RNA		subtype: A	1	231	6A,14S,15L,27I,54M,58I,71D,83L,92P,111P,120G,128D,148V,154K,169F,178T,183G,187D,191I,200S,203R,208G,210S
MN789900	PG15-UG000576	Uganda	2012		genomic RNA		subtype: A	1	231	3L,6A,11I,15L,27I,30R,31G,48I,54M,58I,59I,71D,83L,87Q,91F,92P,111P,116A,118I,120H,128D,148V,154K,169F,178T,183G,187D,200S,203R,208G
MN788860	PG15-UG000577	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,12N,14P,15L,26A,27I,30R,31G,54M,58I,71D,83L,87Q,88Q,91F,92P,96L,111P,116A,120H,128D,148V,169F,178T,200S,203R,207S,208G
MN789582	PG15-UG000578	Uganda	2012		genomic RNA		subtype: A	1	231	6A,10P,11I,14S,15L,27I,50G,54M,58I,71D,83L,91V,111A,116A,120G,123C,128D,131R,148V,154K,169F,178T,180D,200S,203R,207A,208G,225S,230I
MN789284	PG15-UG000581	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,14S,15V,27I,31G,54V,58I,71D,92P,111T,120S,128D,148V,169F,171V,180D,200S,207T,208G
MN789385	PG15-UG000582	Uganda	2012		genomic RNA		subtype: AD	1	231	3M,6A,11I,12Y,13S,14P,30R,54M,58I,71D,79D,83Q,86P,87Q,91L,96L,111P,115V,116A,120S,128D,148V,154K,169F,180D,183G,191I,200S,203R,208G,210S,225S
MN789260	PG15-UG000584	Uganda	2012		genomic RNA		subtype: A	1	231	6A,10P,11I,14S,15L,27I,54M,58I,71D,79D,83L,111P,116A,120G,148V,154K,169F,171V,178T,183G,200S,203R,207T,208G,210S,225S
MN789850	PG15-UG000585	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,31G,33N,83L,86P,87Q,91V,98D,116A,148V,180D,208G,225S
MN789476	PG15-UG000588	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,27I,41T,71D,83L,116A,120S,124V,148V,154K,180D,199R,225S
MN790086	PG15-UG000589	Uganda	2012		genomic RNA		subtype: A	1	231	6A,14P,15L,27I,29D,54M,58V,71D,83L,92P,96I,111T,115L,116A,120G,128D,148V,154K,169F,171V,178T,183G,187D,207A,208G
MN789708	PG15-UG000590	Uganda	2012		genomic RNA		subtype: AD	1	231	6M,15L,27I,31S,41T,83L,87Q,92P,96I,116T,120S,135V,136M,148V,180D,199R,225S
MN789126	PG15-UG000592	Uganda	2012		genomic RNA		subtype: A	1	231	2V,3I,6V,11I,15L,26A,27I,30R,31G,36I,50G,54M,58I,71D,79D,83L,91A,92P,111P,120S,148V,154K,169F,178T,183G,200S,203R,207S,208G,225S
MN789084	PG15-UG000593	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,15V,16T,31G,44A,58I,71D,83L,92P,96I,111I,115V,116A,118I,120G,128D,148V,154K,169F,178T,183G,207T,208G
MN789093	PG15-UG000594	Uganda	2012		genomic RNA		subtype: D	1	231	6L,27I,41T,50G,83L,87Q,96I,116T,120S,135V,148V,154K,180D
MN789939	PG15-UG000596	Uganda	2012		genomic RNA		subtype: ACD	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120S,128D,148V,154K,163E,169F,178T,180D,200S,203R,207S,208G,225S
MN789571	PG15-UG000597	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11M,15L,27I,30R,31G,54M,58I,71D,83L,87Q,92P,96I,111T,116A,120S,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G,210S
MN790134	PG15-UG000598	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,15L,26A,36I,41L,54M,58I,71D,83L,86T,92Q,111P,116A,118I,120G,123S,128D,132K,148V,169F,178T,191I,203R,208G
MN790023	PG15-UG000600	Uganda	2012		genomic RNA		subtype: A	1	231	6T,12Y,14S,15V,27I,54M,58I,71D,83L,91V,111P,116A,120S,128D,148V,153V,154K,164F,169F,171V,178T,180D,200A,203R,207S,208G
MN788880	PG15-UG000601	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,15M,50S,54S,58A,64G,83L,91V,110N,120S,148V,154K,162K,180D,187D,208G,225S,230I
MN789039	PG15-UG000602	Uganda	2012		genomic RNA		subtype: D	1	231	6L,14V,15M,27I,50S,83L,87Q,91V,96L,116A,120H,128D,148V,180D,208G,225S
MN788834	PG15-UG000604	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,27I,41T,79D,83L,87A,91V,120S,148V,154K,171C,183G,204S,207Q,208G
MN789470	PG15-UG000605	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,14S,15L,26A,27I,30R,31G,58I,79D,83L,87Q,96I,111I,116A,120G,148V,154K,169F,171A,178T,183G,200S,203R,208G
MN790145	PG15-UG000606	Uganda	2012		genomic RNA		subtype: C	1	231	6L,15M,27I,41T,71D,83L,91N,92V,93Q,116A,120G,148V,154K,169F,178T,180D,187D,203R,208G,210S
MN790105	PG15-UG000608	Uganda	2012		genomic RNA		subtype: A	1	231	2V,6A,11I,14N,15L,27I,31G,54M,58I,71D,83L,92P,111P,120G,123A,128D,148V,154K,169F,178T,180D,200S,203R,207A,208G,225S
MN789618	PG15-UG000609	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,27I,31G,33N,54M,58I,83L,92P,96I,111T,128D,148V,154K,169F,171A,178T,183G,200S,203R,207T,208G,225S
MN789381	PG15-UG000612	Uganda	2012		genomic RNA		subtype: A	1	231	6A,14T,15L,27I,50G,54M,58V,71D,83L,92P,96L,111P,120G,128D,148V,169F,180D,200S,207A,208G
MN790005	PG15-UG000613	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,14T,15L,27I,50H,58I,71D,83L,87Q,92P,96I,111P,116Q,121A,131R,148V,154K,169F,171A,178T,183G,200S,203R,207T,208G
MN790026	PG15-UG000614	Uganda	2012		genomic RNA		subtype: A	1	231	6A,10F,11T,14S,15L,27I,50G,54M,58I,71D,83I,91V,111P,116A,120G,128D,148V,154K,169F,171A,178T,180D,200S,208G
MN789646	PG15-UG000616	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,15V,27I,30R,54M,58I,59I,71D,83L,87Q,92P,96L,111P,120G,128D,148V,154K,169F,171A,178T,180D,183G,200S,207T,208G,210S
MN789883	PG15-UG000618	Uganda	2012		genomic RNA		subtype: D	1	231	6L,15L,27I,41T,83L,91V,116N,120G,148V,154K,180D,208G,210S,225S
MN789445	PG15-UG000620	Uganda	2012		genomic RNA		subtype: A	1	231	6A,15V,27I,44A,45D,54S,58V,68I,71D,83I,92P,120S,128D,148V,154K,169F,178T,183G,203R,207A,208G,211I
MN789653	PG15-UG000622	Uganda	2012		genomic RNA		subtype: A	1	231	6V,11I,14N,15L,27I,54M,58I,71D,83L,91V,96L,111P,116A,120A,128D,148V,154K,169F,178T,183G,200S,207T,208G,210S
MN789584	PG15-UG000624	Uganda	2012		genomic RNA		subtype: A	1	231	6L,14N,15M,27I,36I,41V,54S,58V,72A,77M,83T,91V,102T,110N,116A,120A,124V,135V,148V,154K,180D,225A
MN789018	PG15-UG000625	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,11I,15V,27I,54M,58I,71D,111I,116A,120A,128D,148V,154K,169F,178T,187D,200S,203R,208G
MN789848	PG15-UG000626	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14N,15L,27I,41T,83L,91V,116A,120S,148V,180D,208G,213D,225S
MN789532	PG15-UG000628	Uganda	2012		genomic RNA		subtype: D	1	231	6L,14P,27I,41T,49S,59I,83L,86A,87Q,91V,96I,116T,120S,148V,171V,180D,210S,225S
MN790052	PG15-UG000629	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14S,15L,27I,41T,91V,120S,148V,154K,180D,199R
MN788919	PG15-UG000632	Uganda	2012		genomic RNA		subtype: D	1	231	6L,14P,15L,27I,83L,110S,116A,128D,148V,178T,208G,225S
MN789659	PG15-UG000633	Uganda	2012		genomic RNA		subtype: CD	1	231	6L,14P,15L,31G,33N,83L,91P,96L,110S,116A,128D,148V,180D,208G,210S
MN788994	PG15-UG000636	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,27I,50A,83L,116A,120S,148V,180D
MN790068	PG15-UG000637	Uganda	2012		genomic RNA		subtype: ACD	1	231	6A,10L,11T,15L,27I,31G,33N,50G,54M,58I,71D,83L,92P,111T,120S,128D,148V,154K,169F,178T,200S,203R,207S,208G,225S
MN789081	PG15-UG000638	Uganda	2012		genomic RNA		subtype: D	1	231	6L,14V,15M,27I,83L,91V,116T,120S,148V,171V,180D
MN789361	PG15-UG000640	Uganda	2012		genomic RNA		subtype: A	1	231	2V,6A,11I,14S,15L,27I,41T,58I,71D,83L,111P,115V,116A,120G,128D,148V,154K,169F,178T,181T,182R,183K,184Q,200S,203R,208G,225S
MN790153	PG15-UG000642	Uganda	2012		genomic RNA		subtype: D	1	231	2L,6L,14T,15L,27I,41M,50A,54S,83L,124V,148V,154K,183G,207S,208G,225S
MN789613	PG15-UG000644	Uganda	2012		genomic RNA		subtype: D	1	231	6M,15L,27I,41T,83L,91V,116Q,120S,148V,178T,183A,208G
MN788982	PG15-UG000645	Uganda	2012		genomic RNA		subtype: AD	1	231	2V,3I,6A,11I,14N,15L,26A,27I,29D,36I,45D,50Y,54M,58I,71D,83L,87Q,92P,96I,111P,116A,120S,128D,148V,154K,169F,171V,180D,183G,203R,207T,208G
MN788934	PG15-UG000646	Uganda	2012		genomic RNA		subtype: D	1	231	6L,27I,41T,83L,91A,120S,148V,180D,203R,225S
MN789805	PG15-UG000648	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,10L,14T,15L,27I,54M,58I,71D,83L,87Q,91V,92P,96L,111P,116A,120H,128D,132K,148V,152E,154K,169F,171A,178T,180D,200S,203R,207A,208G,225S
MN790111	PG15-UG000649	Uganda	2012		genomic RNA		subtype: ACD	1	231	6L,14S,27I,36I,71D,83L,86T,87Q,91V,96V,116A,120H,128D,148V,180D,225S
MN789890	PG15-UG000650	Uganda	2012		genomic RNA		subtype: A	1	231	6A,15V,27I,30R,58I,71D,83L,86A,87Q,91V,98D,120S,128D,131R,148V,152E,154K,169F,180D,183G,200S,203R,208G,211I,225S
MN788795	PG15-UG000652	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,14H,15L,26A,27I,30R,31G,36I,54M,58I,71D,91A,92P,110N,111I,120S,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G
MN789091	PG15-UG000653	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,41T,83L,110N,116Q,120S,148V,180D,225S
MN789779	PG15-UG000656	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,12Y,26A,27I,30R,54M,58I,59I,68L,71D,83L,87Q,91V,96I,111P,120H,128D,131R,148V,154K,169F,171A,183G,200S,203R,204G,207T,208G,225S
MN789800	PG15-UG000657	Uganda	2012		genomic RNA		subtype: CD	1	231	6L,27I,41T,87Q,96V,115V,116A,120S,148V,187D,208G,225S
MN788878	PG15-UG000658	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,26A,27I,30R,31G,45D,50S,54M,58I,71D,79D,83L,87Q,92P,94N,96I,116T,120S,124V,148V,154K,169F,171V,178T,183G,200S,207S,208G
MN789359	PG15-UG000660	Uganda	2012		genomic RNA		subtype: AC	1	231	6L,15L,27I,41T,45D,71D,83L,87Q,91V,96L,116A,120H,124V,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MN789865	PG15-UG000661	Uganda	2012		genomic RNA		subtype: AD	1	231	6T,12Y,14V,15M,27I,31G,33N,54M,58I,71D,78V,83L,91V,111P,116A,120G,124V,128D,148V,154K,169F,178T,183S,200S,203R,207T,208G
MN788782	PG15-UG000662	Uganda	2012		genomic RNA		subtype: A	1	231	6A,27I,30R,31G,54M,58I,71D,79D,83L,87Q,91F,92P,111P,116A,120H,128D,148V,154K,169F,178T,180D,191I,200S,203R,208G,210S,225S
MN789050	PG15-UG000664	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,15L,27I,41T,83L,91N,92P,93A,116A,120G,148V,154K,180D,208G,225S
MN790081	PG15-UG000665	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,14C,15L,41T,83L,91V,115V,116A,120S,148V,180D,200N,207T,208G,225S
MN789107	PG15-UG000666	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,15L,30R,31G,54M,58I,71D,83L,92P,111P,128D,148V,154K,169F,178T,180D,183G,187D,191I,200G,203R,207Q,208G,225S
MN788861	PG15-UG000667	Uganda	2012		genomic RNA		subtype: AC	1	231	6L,15L,27I,41T,45D,71D,83L,87Q,91V,96L,116A,120H,124V,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MN789858	PG15-UG000668	Uganda	2012		genomic RNA		subtype: D	1	231	6L,15L,27I,50T,83L,86L,87Q,91V,96I,116Q,120S,148V,180D,208G,225S,230I
MN790125	PG15-UG000669	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,15L,27I,30R,31G,54M,58I,71D,79D,83L,92P,111P,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G,210S
MN789556	PG15-UG000670	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,15L,27I,41T,83L,86A,87Q,91V,98D,110S,120S,148V,154K,180D,208G,225S
MN788899	PG15-UG000672	Uganda	2012		genomic RNA		subtype: A	1	231	6A,15L,27I,29D,54M,58V,71D,83L,86Q,87Q,92P,96I,98D,111V,116A,120G,128D,131R,148V,154K,169F,178N,180D,200S,203R,208G,225S
MN789814	PG15-UG000673	Uganda	2012		genomic RNA		subtype: ACD	1	231	6L,14P,27I,79D,83L,86I,91Q,116A,120S,148V,154K,171V,180D,225S
MN789742	PG15-UG000676	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11T,14P,15L,27I,33N,47C,54M,58V,71D,83L,92P,111V,113D,120S,128D,131R,148V,169F,178T,180D,200A,207T,208G
MN789275	PG15-UG000678	Uganda	2012		genomic RNA		subtype: AD	1	231	6V,14S,15L,27I,30R,44A,54S,58I,71D,83M,91P,111P,115V,116A,120G,128D,148V,154K,169F,171V,180D,187D,200S,203R,208G
MN788989	PG15-UG000679	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,27I,41T,83L,91V,110S,120S,135V,148V,171V,180D,208G
MN788963	PG15-UG000680	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,50G,58S,83L,87Q,91V,96L,116A,120H,128D,148V,180D,208Q,225S
MN789343	PG15-UG000682	Uganda	2012		genomic RNA		subtype: D	1	231	6L,27I,83L,87Q,91V,96I,116T,148V,180D
MN789957	PG15-UG000683	Uganda	2012		genomic RNA		subtype: D	1	231	6L,14S,15L,27I,50T,83L,91V,116A,128D,148V,180D,230I
MN789617	PG15-UG000684	Uganda	2012		genomic RNA		subtype: D	1	231	2V,6L,15L,27I,41T,83L,116A,148V,180D,208G
MN789182	PG15-UG000685	Uganda	2012		genomic RNA		subtype: A	1	231	6A,14S,15L,27I,54M,58I,83L,92P,111P,120S,128D,148V,154K,165I,169F,178T,180D,203R,204G,208G,210S
MN789709	PG15-UG000686	Uganda	2012		genomic RNA		subtype: D	1	231	6V,27I,50T,79D,91V,116A,120S,148V,154K,180D,183T,187D,208G
MN790103	PG15-UG000687	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,11I,15L,27I,41T,50G,71D,83L,87Q,91V,120S,148V,149G,191I,208G,225S
MN789187	PG15-UG000688	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,41T,83M,87Q,91N,92P,96I,110N,116A,120S,148V,180D,208G
MN788764	PG15-UG000689	Uganda	2012		genomic RNA		subtype: D	1	231	6L,27I,29D,41T,83L,91V,116N,120A,148V,180D,208G,210S,225S
MN789101	PG15-UG000690	Uganda	2012		genomic RNA		subtype: A	1	231	6A,15V,27I,54M,58I,71D,83L,92P,96I,120S,128D,148V,154K,169F,171V,180D,187D,208G,225S
MN789888	PG15-UG000691	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,41A,83L,93A,120S,128D,148V,154K,208G
MN789516	PG15-UG000692	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,15V,27I,54M,58I,71D,83L,91V,96I,111I,116A,120G,128D,148V,154K,169F,171A,180D,187D,199R,200S,207T,208G,225S
MN789428	PG15-UG000693	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,15V,27I,30R,31G,54M,58I,71D,83L,92Q,96L,111P,116A,128D,148V,154K,169F,178T,180D,187D,200S,203R,207S,208G
MN788997	PG15-UG000695	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,79D,83L,91V,116A,120S,148V,154K,180D,225S
MN789843	PG15-UG000696	Uganda	2012		genomic RNA		subtype: A	1	231	6A,14T,15V,27I,54S,58I,71D,83L,92P,120S,128D,148V,153V,154K,169F,171I,174T,180D,183G,187D,203R,205M,208G
MN789061	PG15-UG000697	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,11M,15L,26A,27I,30R,31G,54M,58I,71D,83L,91A,92P,111P,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G
MN789302	PG15-UG000699	Uganda	2012		genomic RNA		subtype: D	1	231	2V,3I,6L,27I,41T,50Y,56M,83L,86A,87Q,91Y,92P,96L,116Q,120S,148V,171I,180D,208G
MN788952	PG15-UG000700	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,14N,15L,27I,54M,58I,71D,83L,91V,92P,111P,120S,128D,148V,169F,178T,180D,200S,203R,207A,208G
MN789726	PG15-UG000701	Uganda	2012		genomic RNA		subtype: C	1	231	6L,27I,41T,45D,50S,54A,71D,83L,91V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,210S
MN789673	PG15-UG000702	Uganda	2012		genomic RNA		subtype: D	1	231	6L,15V,27I,41T,54S,83L,116A,120S,148V,180D,208G
MN789700	PG15-UG000703	Uganda	2012		genomic RNA		subtype: D	1	231	6L,27I,91A,120S,148V,180D,225S
MN789720	PG15-UG000704	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,15L,27I,30R,31G,48I,54M,58I,71D,83L,92P,94N,96L,111P,120G,123A,128D,148V,154K,169F,178T,180D,187D,200A,203R,208G,225S
MN789863	PG15-UG000705	Uganda	2012		genomic RNA		subtype: D	1	231	6L,14P,15L,27I,41T,83L,86P,87Q,120S,148V,180D,208G
MN790061	PG15-UG000706	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,11M,15L,26A,27I,30R,31G,54M,58I,71D,83L,86P,87Q,92P,98D,111P,116A,120S,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G
MN789249	PG15-UG000707	Uganda	2012		genomic RNA		subtype: D	1	231	6P,14N,15M,27I,41A,54S,58V,83T,91V,148V,180D,225S
MN789522	PG15-UG000708	Uganda	2012		genomic RNA		subtype: AD	1	231	3I,5S,6P,11T,12Y,14S,15V,19V,22T,27I,54L,83I,86A,87Q,91L,96L,98D,120S,148V,180D
MN789095	PG15-UG000709	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14P,27I,41T,91N,120S,148V,180D,199R,225A
MN789711	PG15-UG000710	Uganda	2012		genomic RNA		subtype: CD	1	231	6L,15L,27I,31N,41T,71D,91V,116A,120S,128D,148V,169F,180D,183G,187D,191I,203R,208G,210S
MN789750	PG15-UG000712	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,11I,14P,15L,27I,30R,31G,48I,54M,58I,71D,79D,83L,87P,88V,91L,92P,96L,98A,111P,115T,120G,128D,148V,154K,169F,180D,200S,203R,207S,208G
MN789630	PG15-UG000713	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,14N,27I,50H,54M,58I,71D,79D,83L,92P,111P,120S,128D,148V,154K,169F,171I,180D,187D,200S,203R,208G,210S
MN788856	PG15-UG000715	Uganda	2012		genomic RNA		subtype: A	1	231	6A,9A,11I,15L,27I,30R,31G,54M,58I,71D,86A,91V,92Q,111I,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G,225S,230I
MN789216	PG15-UG000716	Uganda	2012		genomic RNA		subtype: A	1	231	2V,6A,11I,14N,15F,27I,29D,50H,54M,58I,71D,91A,92P,111P,120A,128D,154K,169F,180D,183S,187D,199R,203R,208G,225S
MN790044	PG15-UG000718	Uganda	2012		genomic RNA		subtype: A	1	231	6A,27I,54M,58I,71D,83L,92P,111P,116A,120G,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G,225S
MN789540	PG15-UG000719	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14P,27I,83L,91N,92P,116A,120G,123A,148V,180D,225S
MN789978	PG15-UG000720	Uganda	2012		genomic RNA		subtype: D	1	231	6L,15L,27I,41T,83L,105V,107A,120S,124V,148V,180D
MN789349	PG15-UG000721	Uganda	2012		genomic RNA		subtype: AC	1	231	6A,15V,27I,30R,54M,58I,71D,83L,87Q,92P,96L,111I,115V,120S,128D,148V,153V,154K,169F,171I,180D,183G,191I,200Q,204S,207T,208G,210S,216S
MN789745	PG15-UG000722	Uganda	2012		genomic RNA		subtype: A	1	231	2V,6T,11I,12Y,15L,27I,30R,31G,48A,54M,58I,71D,78V,83L,92P,111P,116A,120G,128D,148V,154K,169F,180D,183S,200S,203R,207T,208G,210S
MN788992	PG15-UG000723	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,14P,15L,27I,30R,31G,54M,58I,71D,83L,92P,111T,128D,148V,153V,154K,169F,171I,178T,183G,200S,203R,207S,208G,225A
MN790067	PG15-UG000724	Uganda	2012		genomic RNA		subtype: AC	1	231	27I,41T,71D,91V,96I,116T,120S,124V,148V,154K,169F,178T,180D,187D,191T,203R,208G
MN788807	PG15-UG000725	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,27I,41T,49S,59I,83L,116A,120G,148V,180D
MN790199	PG15-UG000726	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14P,15M,17A,27I,41T,50S,79D,83L,87Q,91V,116A,120A,128D,148V,154K,180D,208G,210S,225S
MN788886	PG15-UG000727	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,14S,15M,27I,31G,54M,58I,71D,79D,83L,91V,96L,111P,116A,123A,128D,148V,154K,169F,171I,180D,183G,200S,203R,207R,208G,210S
MN790029	PG15-UG000728	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14S,15L,27I,41T,83L,91V,94N,120S,148V,154K,180D,208G
MN789727	PG15-UG000729	Uganda	2012		genomic RNA		subtype: D	1	231	6L,27I,41T,87Q,116A,120S,124V,148V,180D
MN789524	PG15-UG000730	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,15L,27I,33N,41T,83M,120S,148V,154K,178T,194S,225S
MN789024	PG15-UG000731	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,15M,16T,27I,54L,75D,83L,115V,116A,120S,148V,178T,225S
MN789196	PG15-UG000732	Uganda	2012		genomic RNA		subtype: A	1	231	6A,14T,15L,27I,50A,58V,71D,79D,83Q,87Q,96I,111P,115M,116A,120G,148V,169F,174S,178T,183H,200S,203R,207T,208G
MN789357	PG15-UG000733	Uganda	2012		genomic RNA		subtype: A	1	231	2V,6A,14N,15L,27I,29D,50H,54M,58I,71D,83L,87Q,92P,96L,111P,115V,120G,128D,148V,154K,169F,179S,180D,187D,200A,203R,207T,208G
MN790138	PG15-UG000734	Uganda	2012		genomic RNA		subtype: D	1	231	6L,15L,27I,75D,91V,96L,116A,120H,148V,154K,177G,180D,208G
MN788763	PG15-UG000735	Uganda	2012		genomic RNA		subtype: D	1	231	6L,27I,78G,83L,116A,120S,148V,180D,183T,225S
MN789455	PG15-UG000736	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,27I,41T,91V,120S,148V,180D,225S
MN788885	PG15-UG000737	Uganda	2012		genomic RNA		subtype: A	1	231	6A,14N,15L,27I,54M,58I,71D,83L,91V,111P,116A,120G,128D,148V,154K,169F,178T,180D,200S,203R,204G,207A,208G
MN789977	PG15-UG000738	Uganda	2012		genomic RNA		subtype: AD	1	231	5S,6A,11L,12Y,14P,15F,27I,30R,31G,54M,58I,71D,83L,87Q,92P,111P,115V,120S,128D,148V,154K,169F,178T,179A,183G,200S,207S,208G,225S
MN788964	PG15-UG000739	Uganda	2012		genomic RNA		subtype: D	1	231	14P,15L,27I,29D,41T,83L,86P,87Q,96I,98D,100T,110N,116R,120S,128D,148V,180D,208G,210S,225S
MN789088	PG15-UG000740	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,27I,50T,83I,91Q,116A,120S,148V,180D,208G,225S
MN789649	PG15-UG000741	Uganda	2012		genomic RNA		subtype: D	1	231	6L,27I,29D,41T,83L,91P,110S,120S,148V,225S
MN789443	PG15-UG000742	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,14N,15L,27I,45D,50H,54M,58I,71D,79D,83L,87Q,92P,96L,111P,120G,128D,148V,154K,163E,169F,171I,180D,191I,200S,203R,207A,208G
MN789214	PG15-UG000744	Uganda	2012		genomic RNA		subtype: A	1	231	6A,12F,15L,26A,27I,30R,31G,36I,54M,58V,71D,83L,87Q,91V,96L,111P,116A,120H,128D,129L,148V,154K,169F,171A,180D,183G,187D,200S,203R,207S,208G,210S
MN789247	PG15-UG000745	Uganda	2012		genomic RNA		subtype: D	1	231	6L,13N,14P,15L,27I,31N,41T,71D,83I,87Q,91Q,98D,116A,120G,148V,178T,180D,187D,200S,203R,208G,210S
MN789729	PG15-UG000746	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,27I,116A,120S,148V,225S
MN789000	PG15-UG000747	Uganda	2012		genomic RNA		subtype: D	1	231	6L,50G,58S,71D,75D,83L,87Q,91V,96L,120S,148V,149G,154K,208N,210P
MN788926	PG15-UG000748	Uganda	2012		genomic RNA		subtype: D	1	231	6L,14P,15L,27I,50T,83L,91Q,110N,116A,120H,148V,180D,208G,225S
MN789547	PG15-UG000751	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,79D,83L,86P,87Q,96I,98D,100T,110N,116R,120S,148V,180D,225S,230I
MN789514	PG15-UG000752	Uganda	2012		genomic RNA		subtype: D	1	231	6L,27I,41T,83L,91Q,96L,110S,115V,116A,120A,148V,178T,208G,210S,225S
MN789189	PG15-UG000753	Uganda	2012		genomic RNA		subtype: AD	1	231	6M,14P,16G,17A,27I,41T,83T,95H,116A,120S,124V,135V,148V,171V,180D,191T,208G
MN789446	PG15-UG000754	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11M,14N,15L,27I,50H,54M,58I,71D,83L,111P,116A,120A,124V,128D,131R,148V,153V,154K,167K,169F,171V,178T,183G,191I,200S,203R,208G,210S,225S
MN789325	PG15-UG000755	Uganda	2012		genomic RNA		subtype: A	1	231	6A,12Y,13N,14S,15L,26A,27I,30R,36I,54L,58V,68I,71D,83L,92P,111P,118I,120S,123S,128D,131R,148V,152E,154K,169F,171V,178T,180D,191I,203R,207A,208G,210S,211V
MN789456	PG15-UG000756	Uganda	2012		genomic RNA		subtype: AC	1	231	6L,10P,14T,15L,27I,41T,71D,83T,116A,120S,128D,148V,154K,169F,178T,180D,203R
MN789058	PG15-UG000757	Uganda	2012		genomic RNA		subtype: D	1	231	6L,14N,27I,41T,83L,93S,120S,148V,154K,180D,203R,208G,225S
MN789178	PG15-UG000758	Uganda	2012		genomic RNA		subtype: A	1	231	6A,15V,26A,27I,30R,36I,47C,54M,58V,71D,83L,92P,111T,120G,128D,148V,154K,169F,180D,183G,200S,203R,207A,208G
MN789654	PG15-UG000759	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,11I,27I,54V,83L,91A,120S,128D,148V,171V,180D
MN790194	PG15-UG000760	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,11I,12L,14T,15L,27I,54M,58I,71D,83L,91A,92P,96I,111P,115L,116A,120S,128D,148V,154K,169F,178T,199R,200S,203R,207T,208G,225S,230I
MN789787	PG15-UG000761	Uganda	2012		genomic RNA		subtype: AG	1	231	6A,11I,14P,15L,26A,27I,30R,31G,54M,58I,71D,92P,111V,116A,124V,128D,148V,153V,154K,169F,171I,178T,183G,191I,200S,207S,208G,210S
MN789031	PG15-UG000764	Uganda	2012		genomic RNA		subtype: AC	1	231	6L,15L,27I,41T,50G,71D,83T,91V,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S
MN789426	PG15-UG000765	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,15V,27I,50G,54M,58I,71D,83L,87Q,88V,91N,111P,115V,116A,120G,128D,131R,148V,154K,169F,178T,200S,203R,207T,208G
MN790115	PG15-UG000767	Uganda	2012		genomic RNA		subtype: AD	1	231	6V,27I,41A,68I,83L,132K,136M,148V,180D,183T,225S
MN789405	PG15-UG000768	Uganda	2012		genomic RNA		subtype: ADG	1	231	3M,6A,11T,12Y,15L,27I,41T,75D,83L,148V,179A,180D,183T
MN790064	PG15-UG000769	Uganda	2012		genomic RNA		subtype: A	1	231	6A,10P,15L,26A,27I,30R,31G,54M,58I,71D,79D,83L,92P,111P,116A,120G,128D,148V,154K,169F,171C,178T,183G,191I,200S,203R,207S,208G,210S,225S
MN789542	PG15-UG000771	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,11T,14N,15L,27I,31C,41T,54M,58I,83I,91V,116A,120G,135V,148V,154K,180D,200S,208G,210S,225S
MN789403	PG15-UG000772	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14T,15L,31G,33N,41T,50S,54S,83L,91V,111T,115V,116A,120G,123A,135V,148V,180D,207T,208G,210S,225S
MN789482	PG15-UG000773	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,27I,58A,83L,91Y,110N,120S,148V,154K,160S,180D,208G
MN789821	PG15-UG000775	Uganda	2012		genomic RNA		subtype: A	1	231	6A,9H,15L,26A,27I,30R,31G,54M,58I,71D,83L,87Q,92P,111P,120H,128D,148V,154K,169F,178T,183S,187D,200S,203R,208G
MN788838	PG15-UG000776	Uganda	2012		genomic RNA		subtype: AD	1	231	14P,27I,54I,83L,91Q,116A,120G,129L,148V,180D,225S
MN789965	PG15-UG000777	Uganda	2012		genomic RNA		subtype: D	1	231	6L,27I,41T,83L,91V,116A,124V,148V,180D,194S,208G,230I
MN789642	PG15-UG000779	Uganda	2012		genomic RNA		subtype: D	1	231	6L,15L,27I,83L,91V,148V,180D,208G,225S,230I
MN789670	PG15-UG000780	Uganda	2012		genomic RNA		subtype: A	1	231	2V,6A,11I,14S,15L,16T,26A,27I,30R,31G,36I,54M,58I,71D,79D,83L,87Q,92P,111P,120S,146N,148V,154K,169F,177G,187G,200S,203R,208G
MN789211	PG15-UG000781	Uganda	2012		genomic RNA		subtype: AC	1	231	6A,15V,27I,41T,54M,58I,71D,83L,86A,87Q,91V,96V,111I,116A,120G,148V,154K,169F,183G,187D,191I,200S,203R,208G,210S,225S
MN789553	PG15-UG000783	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14S,15L,27I,41T,54C,83M,91N,92P,116A,120S,135V,148V,160S,178T,208G,225S
MN789528	PG15-UG000784	Uganda	2012		genomic RNA		subtype: D	1	231	6L,14P,16T,26T,31S,41T,83T,91V,116A,148V,180D,208G,213D
MN789148	PG15-UG000785	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,27I,50S,54M,83L,91P,120S,128D,148V,180D,208G,213D
MN788771	PG15-UG000787	Uganda	2012		genomic RNA		subtype: D	1	231	6L,15L,27I,68I,79D,83L,91Q,116A,120S,148V,179T,180D,183H,208G,225S
MN788747	PG15-UG000788	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,11M,15L,27I,30R,31G,54M,58I,71D,83L,86A,87Q,91N,92P,96L,107V,111P,128D,132K,148V,154K,169F,178T,183Q,200S,203R,208G,225A
MN790143	PG15-UG000789	Uganda	2012		genomic RNA		subtype: A	1	231	6A,13S,14P,16T,26A,27I,30R,36I,54M,58V,71D,83L,92P,111P,116A,120G,123G,124V,128D,148V,154K,169F,180D,183G,187D,191I,203R,207A,208G,225S
MN789449	PG15-UG000791	Uganda	2012		genomic RNA		subtype: ACD	1	231	6A,14T,15M,27I,54S,58I,83L,86Q,87R,91F,92P,96L,98D,100S,110S,116Q,120S,128D,148V,171V,180D,191I,225S
MN789364	PG15-UG000792	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14S,27I,83L,91T,120S,148V,154K,183G,208G,225S
MN788917	PG15-UG000793	Uganda	2012		genomic RNA		subtype: D	1	231	14P,15L,27I,75D,83L,148V,154K,178T
MN789350	PG15-UG000795	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,14P,15L,16T,27I,31S,41T,83L,88S,91V,110N,120G,135V,148V,180D,199R,200N,207T,208G,225S
MN789032	PG15-UG000796	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14P,27I,41T,71D,83L,87Q,96V,116A,148V,180D,200N,208Q,225S
MN789414	PG15-UG000797	Uganda	2012		genomic RNA		subtype: D	1	231	6L,27I,33N,83L,87Q,91V,120S,136M,140R,141V,143K,144L,148V,180D,208G,230I
MN790098	PG15-UG000799	Uganda	2012		genomic RNA		subtype: AC	1	231	6A,11I,14S,15L,27I,29D,31G,47S,54M,58I,71D,87Q,91V,96I,111I,116A,120G,128D,148V,154K,169F,177C,179G,180D,187D,200N,203R,207A,208G
MN788914	PG15-UG000800	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,12Y,13A,15L,27I,30R,31G,48A,53K,54M,58I,59I,71D,83L,87Q,92P,96L,111P,120G,128D,148V,154K,169F,178T,180D,200S,203R,208G,225S
MN789164	PG15-UG000801	Uganda	2012		genomic RNA		subtype: A	1	231	6V,11I,14P,15L,27I,31G,33N,54M,58I,71D,83L,111P,116A,120G,123G,124F,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G
MN790155	PG15-UG000803	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,15L,27I,41T,50T,83L,91N,120S,148V,154K,180D,208G,210S,225S
MN789784	PG15-UG000804	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,27I,83M,91V,120S,123A,148V,154K,178T,225S
MN789262	PG15-UG000805	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,11T,14T,15L,27I,33N,54M,58I,78S,83T,92P,115V,116A,120S,132K,148V,154K,171C,180D,183T,194S,208G
MN788912	PG15-UG000807	Uganda	2012		genomic RNA		subtype: D	1	231	6L,15L,27I,41T,71D,83L,91V,110N,116A,120S,148V,154K,180D,191I,225S
MN788973	PG15-UG000808	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,14S,15L,27I,54M,58I,71D,83L,92P,110N,111I,120S,128D,148V,154K,169F,178T,183G,191I,200S,203R,207A,208G
MN789715	PG15-UG000809	Uganda	2012		genomic RNA		subtype: AC	1	231	6L,15L,27I,41T,71D,83L,91V,110N,120S,148V,154K,169F,180D,203R,208G
MN788918	PG15-UG000811	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,15L,27I,29D,48I,54M,58I,71D,83L,91V,111P,116A,120G,128D,131R,148V,154K,169F,171V,178T,183S,191I,203R,207A,208G
MN789917	PG15-UG000812	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14P,27I,41T,50S,83L,87Q,91V,98D,120S,128D,148V,180D,225S
MN789460	PG15-UG000813	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,14N,15L,27I,54M,58I,68I,71D,83T,92P,111P,115L,120S,128D,148V,169F,183H,187D,200S,203R,208G,225S
MN789218	PG15-UG000814	Uganda	2012		genomic RNA		subtype: C	1	231	6L,15L,27I,41T,71D,83T,87Q,91V,96I,98D,116A,148V,169F,178T,183G,187D,203R,208G,225S
MN789943	PG15-UG000815	Uganda	2012		genomic RNA		subtype: ACD	1	231	6A,11I,27I,31G,54V,58I,71D,83L,86A,92L,111I,120S,128D,148V,154K,169F,178T,187D,200S,208G
MN789345	PG15-UG000816	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,15L,27I,30R,54M,58I,59I,71D,91P,92P,96I,111I,120G,128D,148V,154K,169F,171A,178T,183G,200S,207A,208G
MN789220	PG15-UG000817	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11M,13N,14P,15L,27I,30R,31G,48I,54M,58I,71D,83L,87Q,92P,96L,111T,120S,128D,148V,154K,169F,178T,183G,191I,200S,203R,207S,208G,225S
MN788757	PG15-UG000818	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11S,14S,15L,27I,48L,54M,58I,71D,83T,91V,111V,115M,116A,120S,128D,131R,148V,154K,169F,171V,178T,180D,191I,200S,207T,208G,225S
MN790127	PG15-UG000819	Uganda	2012		genomic RNA		subtype: D	1	231	6L,14P,27I,83L,116A,120S,123A,148V,180D,225S
MN789194	PG15-UG000820	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,14S,15L,27I,48I,54M,58I,71D,83L,92P,111P,120G,128D,148V,154K,163E,169F,178T,180D,200N,203R,207A,208G
MN789942	PG15-UG000821	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,14T,15L,27I,41T,50S,54M,58I,71D,78T,83L,92P,111P,115L,116Q,120S,128D,148V,154K,169F,171A,178T,180D,183S,200S,207T,208G
MN789382	PG15-UG000822	Uganda	2012		genomic RNA		subtype: D	1	231	2V,6L,27I,50S,83L,91T,120S,148V,180D,225S
MN789810	PG15-UG000823	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,14N,15L,27I,50H,54M,58V,71D,74M,77E,96I,111P,116A,120A,128D,148V,153V,154K,169F,171I,178T,183G,191I,200S,207T,208G,210S
MN789109	PG15-UG000824	Uganda	2012		genomic RNA		subtype: A	1	231	6A,14P,15V,27I,54M,58I,71D,83L,91H,92P,96L,116T,128D,131R,148V,154K,169F,171V,180D,187D,191I,200S,207T,208G,225S
MN789984	PG15-UG000825	Uganda	2012		genomic RNA		subtype: AC	1	231	6A,11I,13S,14P,15F,27I,30R,31G,54M,58I,71D,83L,91V,111P,115V,116A,120G,128D,148V,154K,169F,178T,180D,187D,191T,200S,203R,208G
MN789983	PG15-UG000826	Uganda	2012		genomic RNA		subtype: D	1	231	6L,27I,83L,91Q,96L,116A,148V,178T,225S
MN788742	PG15-UG000827	Uganda	2012		genomic RNA		subtype: ACD	1	231	6L,27I,41T,71D,79D,83T,91V,116A,120S,148V,154K,180D,191I,208G,225S
MN789336	PG15-UG000828	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,15M,27I,54M,58I,83I,91V,116A,120S,148V,154K,178T,183A,225S
MN788882	PG15-UG000829	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,10W,11I,12P,14S,15L,27I,31G,33N,54M,58I,59I,83L,87Q,96I,98D,115V,116A,148V,180D,203R,208G,225S
MN789706	PG15-UG000830	Uganda	2012		genomic RNA		subtype: AG	1	231	6A,11I,14S,15L,27I,30R,47C,54M,58I,71D,83L,96I,111P,116A,120G,128D,148V,152E,154K,169F,171C,180D,183G,203R,204G,207S,208G,225S
MN789150	PG15-UG000831	Uganda	2012		genomic RNA		subtype: AD	1	231	6V,11Q,12Y,15L,27I,48A,54M,58V,71D,83L,87Q,92P,96I,111V,115V,116S,120G,131R,148V,154K,169F,177T,178T,203R,207A,208G
MN788743	PG15-UG000832	Uganda	2012		genomic RNA		subtype: 01_AE	1	231	6A,15M,31G,49S,54M,58I,71D,83T,92P,120S,148V,169F,178T,183H,200S,207T,208G,225A
MN789822	PG15-UG000833	Uganda	2012		genomic RNA		subtype: A	1	231	6A,15V,27I,54L,58I,71D,83I,96I,107S,116A,128D,141V,148V,154K,169F,171A,178T,180D,191I,200S,207T,208G,225S
MN790041	PG15-UG000834	Uganda	2012		genomic RNA		subtype: C	1	231	6L,14P,15L,27I,31G,33N,41T,71D,83L,115M,116A,118I,120G,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MN789130	PG15-UG000835	Uganda	2012		genomic RNA		subtype: AD	1	231	2L,6L,15L,27I,41T,83L,116A,148V,178T,200V,204G,207S,208G,225S
MN789893	PG15-UG000836	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,15L,27I,33N,71D,83L,91V,96I,116T,120S,148V,178T
MN789722	PG15-UG000837	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,15L,27I,83L,87Q,91V,110N,116A,148V,208G,225S
MN789155	PG15-UG000839	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,13N,14P,15L,27I,30R,31G,54M,58I,71D,79D,83L,92P,111T,118I,120G,148V,154K,169F,178T,180D,187D,200S,203R,208G
MN789156	PG15-UG000840	Uganda	2012		genomic RNA		subtype: A	1	231	6A,14N,15L,27I,54M,58I,71D,83T,91V,107S,111P,116A,120S,128D,148V,154K,169F,171A,178T,183G,187Q,200S,203R,207T,208G
MN789718	PG15-UG000841	Uganda	2012		genomic RNA		subtype: AD	1	231	2V,3L,6A,11I,12Y,15M,30R,31G,33N,54M,58I,71D,79D,83L,87Q,92P,111P,120S,148V,154K,169F,171A,178T,180D,183G,200S,203R,207S,208G,210S
MN789969	PG15-UG000843	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,15L,27I,83L,91V,96L,110S,120S,148V,180D,225S
MN789764	PG15-UG000844	Uganda	2012		genomic RNA		subtype: D	1	231	6L,27I,41T,50G,83L,87Q,96L,120A,135V,148V,154K,180D,203R,225S
MN789695	PG15-UG000845	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14S,15L,27I,58A,83L,91N,110N,120S,148V,154K,180D,207T,208G,225S
MN789411	PG15-UG000847	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,12Y,16T,26A,27I,30R,31G,54M,58V,71D,79D,83L,92P,111P,120G,128D,148V,154K,169F,178T,187D,191S,199R,200A,203R,208G,225S
MN790137	PG15-UG000849	Uganda	2012		genomic RNA		subtype: D	1	231	6L,15L,27I,41T,50G,59I,83L,91V,116A,120S,128D,148V,178T,180D,207T,208G,225S
MN790016	PG15-UG000852	Uganda	2012		genomic RNA		subtype: D	1	231	6L,27I,50A,79D,83L,94N,96I,116T,120S,124V,148V,154K,180D,225S
MN789056	PG15-UG000853	Uganda	2012		genomic RNA		subtype: A	1	231	6A,10W,11I,15V,26A,30R,31G,54M,58I,71D,83L,92P,96I,128D,148V,169F,171V,178T,183G,200S,203R,207S,208G,225S
MN789083	PG15-UG000854	Uganda	2012		genomic RNA		subtype: D	1	231	6L,11T,12Y,14T,15L,27I,83L,111T,116A,120A,124V,148V,154K,171V,177G,180D,207A,208G,225S
MN789016	PG15-UG000856	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,15L,27I,30R,31G,48I,54M,58I,71D,83L,92P,120S,128D,148V,154K,169F,178T,187D,200S,201L,203R,208G
MN789137	PG15-UG000858	Uganda	2012		genomic RNA		subtype: AC	1	231	6X,7X,9C,10T,11H,14X,15X,16X,17X,18X,20LMV,26Y,27X,28X,31V,32X,33X,34X,35X,36X,37X,38X,39X,40X,41X,42X,43X,44X,45X,46X,47X,48X,49X,50X,51X,52X,53X,54X,55X,56X,57X,58X,59X,60X,61X,62X,63X,64X,65X,66X,67X,68X,69X,70X,71X,73Q,74S,75I,76K,77X,78X,79X,80X,81X,82X,83X,84X,85X,86X,87X,88X,89X,90X,91X,92X,93X,96A,97*,98R,100X,111P,115V,116R,120S,128D,148V,154K,165G,166N,169F,178T,183H,200S,203R,207T,208G,225S
MN789317	PG15-UG000859	Uganda	2012		genomic RNA		subtype: AD	1	231	2V,6A,9H,15V,27I,30R,31G,54V,58I,71D,83L,92P,111I,120S,121T,124V,128D,148V,154K,169F,178T,180D,203R,210S,216A,225S
MN789251	PG15-UG000860	Uganda	2012		genomic RNA		subtype: A	1	231	6A,15L,33N,54M,58V,71D,83L,92P,115V,118I,120G,131R,148V,169F,178T,199R,200S,207A,208G,225S
MN790090	PG15-UG000861	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,15V,27I,54M,58I,75D,77I,78V,83L,91V,108S,111V,116A,120G,128D,148V,154K,169F,171A,178T,183L,187D,200S,203R,208G,225S
MN788965	PG15-UG000863	Uganda	2012		genomic RNA		subtype: A	1	231	6T,12Y,14S,15V,27I,41T,54M,58I,71D,83L,87Q,92P,96L,111P,120A,128D,148V,154K,167K,169F,171V,178T,183H,203R,204G,207T,208G
MN790076	PG15-UG000864	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,11I,12Y,15V,27I,30R,54M,58I,71D,83L,91V,111P,116A,120G,128D,148V,154K,169F,178T,183G,203R,208G,213D
MN788921	PG15-UG000866	Uganda	2012		genomic RNA		subtype: AC	1	231	6L,15V,27I,41T,54S,71D,83L,91V,116A,120A,128D,136M,148V,154K,169F,177C,178T,180D,203R,208Q
MN789003	PG15-UG000867	Uganda	2012		genomic RNA		subtype: A	1	231	6A,13N,14P,15L,27I,30R,31G,54M,58I,71D,83L,87Q,92P,111V,115V,120G,128D,148V,153V,154K,169F,171I,178T,183H,200S,207S,208G
MN789771	PG15-UG000868	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,9H,11I,14P,15L,27I,30R,31G,54M,58I,71D,79D,83L,87Q,88V,92P,110N,111T,120S,128D,148V,154K,169F,178T,183G,187Q,203R,207Q,208G,225S
MN789313	PG15-UG000871	Uganda	2012		genomic RNA		subtype: ACD	1	231	6L,27I,83L,86A,91T,120S,123A,136M,141V,143K,148V,178T,225S
MN789344	PG15-UG000872	Uganda	2012		genomic RNA		subtype: D	1	231	6L,27I,83I,120S,148V,180D,225S
MN789399	PG15-UG000873	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14P,27I,41T,83L,91V,120G,123V,148V,180D,200M,204S,208Q
MN789772	PG15-UG000874	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,14S,15L,26A,27I,30R,31G,47C,54M,58I,71D,79D,87Q,91F,92P,96I,111I,116A,120S,148V,154K,169F,180D,183T,187Q,200A,203R,205FL,206X,208G,225S,230I
MN789315	PG15-UG000875	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,15L,27I,33N,44A,83L,91V,116A,120A,148V,208G,225S
MN788829	PG15-UG000876	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,12Y,27I,30R,54M,58I,71D,83L,87Q,92P,96L,111P,115V,120G,128D,148V,154K,169F,177C,178T,183G,187D,191I,200S,203R,208G
MN789429	PG15-UG000877	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,15L,27I,30R,31G,54M,58I,59I,71D,79D,83L,92P,111P,120G,123S,148V,154K,169F,178T,180D,187D,200S,203R,208G,225S
MN789395	PG15-UG000879	Uganda	2012		genomic RNA		subtype: A	1	231	6A,10L,11I,14P,15L,26A,27I,29D,54M,58V,71D,83L,87Q,91V,96L,98D,111P,116A,120A,128D,146C,148V,153V,154K,169F,170R,171I,178T,183G,203R,204G,207T,208G
MN790119	PG15-UG000880	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,14N,15L,27I,48S,54M,58I,71D,83L,86A,87Q,111P,116A,120A,128D,148V,154K,163E,169F,178T,200S,203R,207A,208G
MN789559	PG15-UG000881	Uganda	2012		genomic RNA		subtype: ACD	1	231	6L,27I,83L,86P,87Q,96I,98D,116T,148V,180D,225S
MN789242	PG15-UG000882	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,13N,14P,15L,27I,54M,58I,71D,83L,87Q,91V,111I,116A,120S,128D,148V,154K,169F,171A,178T,183H,200S,203R,207A,208G,225S
MN789369	PG15-UG000884	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,27I,41T,83L,116Q,120S,148V,160S,180D,199R,208G,225S
MN789789	PG15-UG000885	Uganda	2012		genomic RNA		subtype: D	1	231	6L,27I,33N,54S,58A,79D,83L,91T,120S,148V,154K,183G,207Q,208G,225S
MN788810	PG15-UG000886	Uganda	2012		genomic RNA		subtype: A	1	231	6A,14P,15M,26A,27I,30R,31G,54M,58I,71D,79D,83L,86A,87Q,91F,92P,96L,110N,116A,120H,124V,128D,148V,154K,169F,178T,180D,200A,203R,207S,208G,225S
MN789577	PG15-UG000910	Uganda	2015		genomic RNA		subtype: AC	1	231	6A,14T,15L,27I,54M,58I,71D,83L,87Q,91V,96I,104V,110N,111I,116T,120A,148V,154K,169F,178T,183G,191I,200S,203R,207T,208G
MN789447	PG15-UG000911	Uganda	2015		genomic RNA		subtype: A	1	231	6A,13S,14N,15L,27I,58I,68I,71D,75D,79D,83L,96L,111P,115V,116A,120A,128D,148V,154K,169F,171V,177G,180D,200A,203R,208G
MN789838	PG15-UG000912	Uganda	2015		genomic RNA		subtype: A	1	231	6A,15M,27I,54M,58I,71D,92P,110N,120G,131R,148V,169F,171A,178T,180D,200S,207T,208G,230I
MN789496	PG15-UG000913	Uganda	2015		genomic RNA		subtype: A	1	231	6A,12Y,15V,27I,30R,54M,58I,71D,83L,87Q,91V,96L,111P,116A,120G,123A,128D,148V,154K,169F,180D,183G,187D,191I,207T,208G
MN789234	PG15-UG000914	Uganda	2015		genomic RNA		subtype: A	1	231	2V,6A,11I,15F,16T,27I,30R,31G,54M,58I,71D,83L,92P,111P,115V,120G,148V,154K,169F,178T,183S,187D,200S,207S,208G
MN789277	PG15-UG000916	Uganda	2015		genomic RNA		subtype: AD	1	231	2V,6L,27I,50G,83T,87Q,91V,96L,120S,148V,183H
MN789525	PG15-UG000917	Rwanda	2015		genomic RNA		subtype: AD	1	231	6L,14T,15L,27I,50G,83L,116A,120S,128D,148V,180D,210S
MN789105	PG15-UG000918	Uganda	2015		genomic RNA		subtype: A	1	231	6A,14G,15L,33N,54M,58V,71D,83A,86P,91V,96I,110S,120S,131R,148V,154K,169F,178T,200S,203R,208G,225S
MN789704	PG15-UG000919	Uganda	2015		genomic RNA		subtype: AD	1	231	6T,11I,15L,26A,27I,30R,31G,50G,54M,58I,71D,83L,92P,111I,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G
MN788945	PG15-UG000920	Uganda	2015		genomic RNA		subtype: AD	1	231	3I,6A,11I,14P,15L,27I,30R,31G,54M,58I,71D,83L,92P,111I,120S,128D,129L,148V,154K,169F,178T,183G,200S,203R,207S,208G
MN789746	PG15-UG000921	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,11I,14T,15L,27I,54M,58I,71D,83M,96L,111T,120S,148V,153V,154K,169F,171I,178T,180D,191I,200S,203R,204G,207T,208G
MN789945	PG15-UG000922	Tanzania	2015		genomic RNA		subtype: AC	1	231	6A,11I,14G,15V,27I,30R,31G,41T,54M,58I,71D,83L,87Q,92P,96I,111P,116A,128D,148V,154K,169F,178T,180D,187D,200S,203R,208G,210S,225S
MN789035	PG15-UG000923	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11S,15L,26A,27I,30R,31G,36I,54M,58I,71D,79D,83L,92P,111P,128D,146N,148V,154K,169F,177G,178T,187Q,200A,203R,208G
MN788981	PG15-UG000925	Uganda	2015		genomic RNA		subtype: D	1	231	27I,31N,83T,87Q,91V,98D,120S,128D,131R,138F,148V,178T,180D,203R,208G,225S
MN789595	PG15-UG000926	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,12Y,15V,54M,58I,71D,83L,86A,87Q,92P,96L,111P,120G,128D,148V,169F,171A,180D,183G,200S,203R,207T,208G
MN790149	PG15-UG000927	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,12Y,15V,54M,58I,71D,83L,86A,87Q,92P,96L,111P,120G,128D,148V,169F,171A,180D,183G,200S,203R,207T,208G
MN789379	PG15-UG000928	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,41T,83L,86P,87Q,91V,120S,148V,180D,225S
MN789160	PG15-UG000929	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,13N,14P,15L,26A,27I,30R,31G,50S,54M,58I,71D,83I,111T,116A,120G,123S,128D,148V,154K,169F,178T,183G,200S,203R,207T,208G,225S
MN789332	PG15-UG000930	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,11I,14S,15L,26A,27I,36I,41T,45D,50G,54M,58I,83L,87Q,92P,96L,111I,120G,128D,148V,204S,208G,210S
MN789100	PG15-UG000931	Uganda	2015		genomic RNA		subtype: AC	1	231	6A,11T,15V,31G,54M,58I,71D,79D,83L,91V,111I,116A,120G,128D,148V,154K,169F,178T,183S,200S,203R,207T,208G
MN789801	PG15-UG000932	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,14T,15L,27I,54M,58I,71D,83L,86I,111P,116A,120A,128D,148V,154K,169F,171C,178T,183G,191I,203R,207T,208G
MN789526	PG15-UG000933	Uganda	2015		genomic RNA		subtype: A	1	231	3M,6A,11I,14P,15L,26A,27I,30R,31G,54M,58I,59I,71D,83L,91V,110N,111V,115V,116A,123A,128D,148V,154K,169F,171V,178T,183G,187D,200S,203R,207A,208G,225S
MN789929	PG15-UG000934	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,14S,27I,83L,91V,120S,148V,180D
MN790087	PG15-UG000935	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,14P,15M,27I,41T,50S,54S,83L,96L,116A,120H,148V,180D,203R,225S
MN789266	PG15-UG000936	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,27I,54M,58I,71D,83L,87Q,96I,98D,111P,116A,120R,128D,148V,154K,169F,171V,178T,180D,191I,203R,207A,208G,225S
MN790161	PG15-UG000937	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,15V,27I,41T,54S,83L,87Q,91V,120S,148V,180D,225S
MN788770	PG15-UG000939	Uganda	2015		genomic RNA		subtype: D	1	231	2V,6L,14T,15L,27I,31G,83M,111P,116A,148V,180D,208G,210S,225S
MN789537	PG15-UG000943	Uganda	2015		genomic RNA		subtype: D	1	231	6L,27I,83L,91V,116N,120G,148V,180D,225S
MN789015	PG15-UG000959	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,27I,41T,83L,113D,120S,148V,154K,171V,180D,199R,230I
MN789239	PG15-UG000963	Uganda	2015		genomic RNA		subtype: ACD	1	231	6L,31G,33N,83L,91N,110S,116A,128D,148V,154K,180D,208G,225S
MN789866	PG15-UG000965	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,12P,14T,15L,27I,54M,58I,83L,91V,107S,111P,115V,116A,120G,128D,148V,153V,154K,169F,178T,203R,204G,207T,208G
MN789899	PG15-UG000968	Uganda	2015		genomic RNA		subtype: D	1	231	6L,11A,12Y,14S,27I,83L,91N,92P,93A,96L,115V,120S,148V,154K,171I,191I,208G,216S
MN789627	PG15-UG000975	Uganda	2015		genomic RNA		subtype: AD	1	231	2L,6L,11I,14S,27I,45D,71D,83L,91N,116A,120S,148V
MN789240	PG15-UG000976	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,12Y,14S,15M,27I,41T,54M,58I,64G,71D,79D,83L,87P,91V,96I,111P,116A,120G,128D,148I,153V,154K,169F,170R,171I,180D,183G,191I,203R,204G,207S,208G,210S
MN788957	PG15-UG000977	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,11T,15L,27I,30R,31G,54M,58I,71D,83L,86P,92P,111T,120G,128D,148V,154K,169F,178T,187D,200S,203R,208G
MN788959	PG15-UG000979	Uganda	2015		genomic RNA		subtype: A	1	231	2V,6T,11I,14P,15L,27I,30R,31G,54M,58I,71D,83I,91N,92P,111I,116A,148V,154K,169F,178T,183G,200S,207T,208G,225S
MN789212	PG15-UG000981	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,10A,15L,27I,30R,31G,54M,58I,71D,79D,83L,87P,91Y,92P,111P,116A,120H,128D,148V,153V,154K,169F,171I,178T,183G,191I,200S,207T,208G
MN789373	PG15-UG000984	Uganda	2015		genomic RNA		subtype: A	1	231	6A,15V,27I,54M,58I,71D,83I,116A,120S,128D,148V,154K,169F,171I,180D,187D,207A,208G
MN789329	PG15-UG000985	Uganda	2015		genomic RNA		subtype: A	1	231	2V,5S,6V,11I,12Y,15L,27I,31G,33N,54M,58V,71D,83L,86A,87Q,92P,96L,111P,115T,120G,131R,148V,154K,169F,171I,190M,191I,200S,208G,210S
MN790123	PG15-UG000990	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,15L,27I,30R,31G,54M,58I,71D,83L,92P,111P,128D,148V,154K,169F,178T,200S,203R,207Q,208G,225T,230I
MN789108	PG15-UG000993	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,11I,14S,15L,27I,54M,58I,71D,79D,83L,92P,111I,120S,128D,148V,153V,169F,171I,180D,183H,203R,204G,207Q,208G,210S
MN789289	PG15-UG000999	Uganda	2015		genomic RNA		subtype: ACD	1	231	6A,11T,15L,26A,27I,30R,31G,36I,54M,58I,83L,86A,87Q,92P,96I,111P,115V,116I,120G,128D,148V,153V,154K,169F,171V,178T,183G,190M,203R,204G,207Q,208G
MN789271	PG15-UG001007	Uganda	2015		genomic RNA		subtype: D	1	231	2V,6L,15L,33N,50A,71D,83T,91V,116A,120S,148V,180D,225S
MN790126	PG15-UG001011	Uganda	2015		genomic RNA		subtype: A	1	231	6A,14G,26A,27I,30R,54M,58I,68L,71D,79D,83L,95H,96I,111P,116T,120S,128D,131R,148V,154K,169F,171V,180D,183G,191I,200A,203R,207T,208G
MN788881	PG15-UG001012	Uganda	2015		genomic RNA		subtype: D	1	231	6L,27I,41T,83L,116N,120S,148V,154K,171V,180D,183S,207T,208G
MN789657	PG15-UG001013	Uganda	2015		genomic RNA		subtype: AD	1	231	15L,27I,30R,83M,91A,110S,120S,148V,180D,225S
MN788938	PG15-UG001014	Tanzania	2015		genomic RNA		subtype: AD	1	231	6L,14S,15L,27I,41T,83L,91A,110S,120S,148V,154K,180D,208G,210S
MN788901	PG15-UG001016	Uganda	2015		genomic RNA		subtype: D	1	231	6L,27I,50T,54I,83L,91V,116A,120S,128D,148V,154K,178T,225S
MN789372	PG15-UG001020	Tanzania	2015		genomic RNA		subtype: AD	1	231	6L,27I,83L,91N,92P,93A,110N,116A,120G,148V,180D,225S
MN788809	PG15-UG001021	Uganda	2015		genomic RNA		subtype: A	1	231	6A,27I,41T,68I,71D,79D,83T,96I,116A,123V,128D,148V,169F,178T,187D,200S,208G,225S
MN789378	PG15-UG001023	Uganda	2015		genomic RNA		subtype: AD	1	231	3I,6A,9G,14P,15L,27I,48V,54M,58V,71D,83L,92P,110N,111V,116A,118I,120G,128D,131R,148V,154K,169F,178T,180D,200S,203R,207A,208G
MN789221	PG15-UG001024	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,15V,27I,30R,44A,54M,58I,71D,91P,128D,148V,154K,169F,171I,180D,191I,200S,207T,208G,210S,225S
MN789744	PG15-UG001026	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,10W,14N,15L,27I,54M,58I,71D,83L,92P,104V,111P,120S,128D,148V,154K,169F,178T,180D,187D,200S,203R,207A,208G
MN789106	PG15-UG001035	Uganda	2015		genomic RNA		subtype: ACD	1	231	6A,11T,15V,16T,27I,31G,48I,54L,58I,71D,83I,111P,116A,118I,120H,128D,148V,154K,169F,178T,183G,200S,203R,207T,208G
MN789185	PG15-UG001036	Uganda	2015		genomic RNA		subtype: D	1	231	6Q,14P,27I,30R,41T,44A,50H,54V,83M,110N,115V,120S,148V,180D,203R,208G,210S,225S
MN788979	PG15-UG001037	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,14V,15L,27I,41T,50A,83L,116A,120G,124V,148V,180D,208G,225S
MN789502	PG15-UG001041	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,14T,15M,27I,41T,50S,54M,58I,71D,83L,91V,92Q,110N,120S,128D,139H,148V,154K,169F,171V,178T,180D,187D,203R,208G
MN789572	PG15-UG001043	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,27I,83L,116A,120S,148V,178T
MN789714	PG15-UG001045	Uganda	2015		genomic RNA		subtype: A	1	231	6A,15V,27I,30R,44A,47C,54M,58I,71D,83L,92P,111I,116A,120S,128D,148V,154K,169F,178T,180D,200A,203R,207T,208G
MN788798	PG15-UG001046	Uganda	2015		genomic RNA		subtype: ACD	1	231	6A,11I,12Y,14S,27I,30R,31G,54M,58I,71D,83L,87Q,91F,92P,111P,120H,128D,148V,153V,154K,169F,171I,178T,183G,191I,200S,207S,208G
MN789638	PG15-UG001047	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,15L,27I,45D,50S,54S,83L,96L,116A,148V,180D,208G,225S
MN789958	PG15-UG001048	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,15L,27I,54M,58V,71D,87Q,91F,92P,93H,98D,110S,111V,120G,128D,131R,146C,154K,169F,171I,180D,200S,203R,207G,208G
MN790099	PG15-UG001053	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,10P,11I,14S,15L,30R,31G,41A,54M,56M,58I,83L,87Q,92P,96I,111T,116A,120S,128D,148V,154K,169F,180D,183G,200S,203R,207S,208G
MN789186	PG15-UG001054	Uganda	2015		genomic RNA		subtype: D	1	231	6L,14P,27I,31G,33N,83I,116A,128D,148V,180D,210S,225S
MN788893	PG15-UG001055	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,11I,12Y,15L,27I,33N,54M,58V,71D,83L,91V,92Q,111V,131R,148V,154K,180D,208Q,210S,215L
MN789320	PG15-UG001056	Rwanda	2015		genomic RNA		subtype: D	1	231	6L,27I,83L,116T,120S,148V,178T,225S
MN789747	PG15-UG001059	Tanzania	2015		genomic RNA		subtype: AD	1	231	6L,27I,31G,33N,87Q,91V,115V,120S,148V,178T,207A,208G,225S
MN789881	PG15-UG001060	Uganda	2015		genomic RNA		subtype: A	1	231	6A,14H,15M,27I,54M,58I,71D,111A,116A,120G,128D,148V,154K,163E,169F,180D,187D,200S,207T,208G
MN789208	PG15-UG001063	Uganda	2015		genomic RNA		subtype: D	1	231	6L,27I,41T,50S,54S,83L,87P,91Y,92P,96L,98D,116T,120S,128D,148V,180D,225S
MN789397	PG15-UG001064	Uganda	2015		genomic RNA		subtype: D	1	231	6L,27I,52I,83L,91N,120S,134V,148V,178T,208G
MN788954	PG15-UG001067	Uganda	2015		genomic RNA		subtype: AC	1	231	2V,15L,27I,30R,31G,54M,58I,71D,83L,91V,111P,115V,116A,120G,121T,123S,128D,148V,153V,154K,160S,169F,171V,180D,183G,191I,203R,207S,208G
MN789573	PG15-UG001068	Uganda	2015		genomic RNA		subtype: A	1	231	6A,14N,15L,17A,27I,36I,45D,50Y,54M,58I,71D,83L,86A,87Q,92P,96I,111T,115L,116A,120S,128D,148V,154K,169F,178T,183G,200S,203R,207T,208G
MN788913	PG15-UG001069	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,10P,11I,15L,27I,30R,31G,54M,58I,71D,83L,86A,92P,111I,120S,128D,148V,154K,169F,178T,187D,200S,203R,208G
MN790058	PG15-UG001071	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,11I,15V,31G,54M,58I,71D,83I,111I,128D,148V,154K,169F,178T,180D,200S,203R,208G
MN789454	PG15-UG001072	Uganda	2015		genomic RNA		subtype: D	1	231	6L,27I,41T,83L,148V,154K,178T,199R
MN789494	PG15-UG001073	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,12N,14P,15L,27I,31G,33N,54M,58I,71D,83L,94N,96L,111I,116A,120Q,128D,148V,169F,178T,200S,203R,207S,208G,225S
MN789628	PG15-UG001074	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,11I,14T,15L,27I,41T,54M,58I,71D,75D,83L,91V,94N,96L,111P,116A,120A,128D,148V,154K,169F,171C,183G,187D,191I,200A,203R,207S,208G,225S
MN789165	PG15-UG001076	Uganda	2015		genomic RNA		subtype: A	1	231	6A,14T,27I,30R,54M,58I,83M,91A,92P,96L,120S,124V,128D,148V,154K,169F,171I,180D,183G,207S,208G,230I
MN790175	PG15-UG001077	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,15L,27I,30R,31G,41T,54S,58I,71D,79D,83L,92P,111P,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G
MN789179	PG15-UG001079	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,12Y,15F,27I,30R,31G,48A,54M,58I,68I,71D,83L,87Q,92P,111P,115V,120G,131R,148V,154K,169F,180D,183G,191I,200S,203R,207S,208G
MN789847	PG15-UG001081	Uganda	2015		genomic RNA		subtype: AC	1	231	6A,11I,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,120S,128D,148V,154K,169F,178T,180D,200S,203R,207Q,208G,225S
MN789002	PG15-UG001082	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,11I,12Y,15L,27I,29D,41T,83L,91N,110N,116A,120S,148V,178T,180D,208G,225S
MN790148	PG15-UG001083	Uganda	2015		genomic RNA		subtype: ADG	1	231	6L,14P,27I,41T,83L,110N,120S,135V,148V,154K,171V,180D,225S
MN789856	PG15-UG001084	Uganda	2015		genomic RNA		subtype: ACD	1	231	6A,10W,14N,27I,44A,50H,54M,58I,71D,83T,86A,91V,111P,120S,148V,154K,169F,178T,180D,187D,191I,203R,208G,209P,210S
MN789952	PG15-UG001093	Uganda	2015		genomic RNA		subtype: ACD	1	231	6A,9H,14S,15L,27I,30R,31G,54M,58I,71D,83L,111P,116A,120G,124V,128D,129L,148V,153V,154K,169F,178T,183G,200S,207S,208G
MN789462	PG15-UG001094	Uganda	2015		genomic RNA		subtype: D	1	231	6L,27I,83L,91V,116A,120S,148V,178T,208G,213D
MN789795	PG15-UG001095	Uganda	2015		genomic RNA		subtype: C	1	231	6L,14S,15M,27I,31G,33N,71D,83L,87Q,91V,96L,98D,116A,120K,124M,128D,148V,154K,169F,180D,187D,203R,208G,210S
MN788960	PG15-UG001096	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,27I,41T,83L,110S,120S,148V,154K,180D,225S
MN789515	PG15-UG001097	Uganda	2015		genomic RNA		subtype: D	1	231	13S,14P,15L,27I,31N,41T,83L,87Q,91Q,98D,116N,120G,148V,180D,187D,199R,200N,203R,208G,210S
MN790114	PG15-UG001098	Uganda	2015		genomic RNA		subtype: D	1	231	6L,15L,50T,54S,58A,59I,75D,81N,83L,100T,120S,148V,154K,160S,180D,225S
MN790189	PG15-UG001099	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,14C,15L,27I,54M,58I,71D,83T,92P,111I,120G,124V,128D,148V,154K,169F,178T,179A,187D,200S,203R,208G
MN789480	PG15-UG001100	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,14N,15L,27I,54M,58I,71D,83L,111T,116A,120G,128D,148V,153V,154K,169F,178T,183G,191I,200S,207T,208G
MN788738	PG15-UG001101	Uganda	2015		genomic RNA		subtype: D	1	231	6L,11I,15L,27I,41T,50G,83L,87Q,91Y,92P,96L,116Q,120S,148V,154K,180D,203R
MN789347	PG15-UG001103	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,27I,41T,83L,86A,87Q,96V,98D,116A,120S,148V,187D,199R,208G
MN789887	PG15-UG001104	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,27I,41T,83M,115V,116A,120S,124V,148V,180D,225S
MN789809	PG15-UG001107	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,11I,14S,15L,27I,31G,33N,54M,58I,71D,83L,87Q,111P,116A,120G,128D,148V,154K,169F,177C,178T,183G,191I,200S,203R,207T,208G,225S
MN789612	PG15-UG001108	Uganda	2015		genomic RNA		subtype: A	1	231	6A,15V,27I,54C,58I,71D,83L,91P,96L,116A,118T,120A,128D,169F,178T,183H,207S,208G
MN789517	PG15-UG001110	Uganda	2015		genomic RNA		subtype: A	1	231	2V,6A,9G,15L,26A,27I,30R,31G,36I,50T,52F,54M,58I,71D,83T,92P,96I,111T,116I,120S,128D,148V,154K,169F,178T,183G,200S,203R,207T,208G,210S
MN789656	PG15-UG001112	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,11M,15L,27I,50T,54M,58I,71D,83L,91V,111P,116A,118I,120G,128D,148V,154K,169F,171V,180D,183T,187D,200N,203R,207T,208G,225S
MN789681	PG15-UG001113	Uganda	2015		genomic RNA		subtype: ADG	1	231	6A,11I,14P,15F,27I,31S,44A,47G,54M,58V,71D,83L,92P,111T,120G,148V,169F,171C,180D,200S,203R,207T,208G,225S
MN789609	PG15-UG001115	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,11I,14N,15L,27I,31G,33N,54M,58I,71D,83L,86I,111P,116A,120S,128D,148V,154K,169F,178T,180D,191I,200S,203R,207T,208G,210S,225S
MN789314	PG15-UG001116	Rwanda	2015		genomic RNA		subtype: AD	1	231	6L,16T,27I,41T,83T,116A,120S,148V,180D
MN790096	PG15-UG001118	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,14S,15L,33N,54M,58V,71D,83T,87Q,92P,96I,120S,128D,131R,148V,169F,171C,180D,200A,207T,208G,225S
MN789356	PG15-UG001119	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,16T,27I,41T,83T,116A,120S,148V,180D
MN789543	PG15-UG001120	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,11A,15L,31G,50G,54M,58I,71D,79D,83L,120S,148V,154K,169F,178T,200S,207S,208G
MN789930	PG15-UG001132	Uganda	2015		genomic RNA		subtype: A	1	231	6A,14T,15V,27I,54M,58I,71D,83T,92P,111P,120S,128D,148V,154K,169F,180D,187D,200S,203R,207A,208G,225S
MN789236	PG15-UG001140	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,14S,15L,27I,54M,58I,71D,83L,111P,116A,120A,128N,132G,148V,154K,169F,178T,180D,191I,200S,203R,207A,208G
MN790192	PG15-UG001141	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11T,12Y,13N,14P,15P,27I,30R,31G,54M,58I,71D,83L,87Q,91F,92P,111V,120S,128D,148V,154K,169F,180D,183G,187D,191I,203R,207S,208G,225A
MN788903	PG15-UG001145	Uganda	2015		genomic RNA		subtype: A	1	231	2V,6A,13S,14H,15L,27I,31G,48I,58I,71D,79D,83L,92P,111P,115V,120S,148V,154K,163E,169F,171I,177G,200S,207T,208G,225S
MN789310	PG15-UG001146	Uganda	2015		genomic RNA		subtype: ACD	1	231	6L,27I,31G,41T,45D,50T,54A,58I,71D,83L,91P,110N,116A,120G,124V,128D,148V,154K,169F,178T,180D,187D,191I,203R,208G,225S
MN788776	PG15-UG001147	Uganda	2015		genomic RNA		subtype: ACD	1	231	6A,11I,15V,27I,41T,54M,58I,71D,83L,87Q,91V,96I,111V,115M,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
MN788941	PG15-UG001148	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,15L,27I,41T,83L,86P,87Q,91V,98D,116A,120S,148V,154K,180D,225S
MN789587	PG15-UG001151	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,15L,31G,54M,58I,71D,83L,92P,111T,120G,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G
MN788995	PG15-UG001152	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,14P,15M,27I,31G,33N,58I,83L,110N,116T,120G,148V,179L,225S
MN789534	PG15-UG001158	Uganda	2015		genomic RNA		subtype: CD	1	231	6L,14S,27I,41T,50A,59I,71D,83L,91V,110N,116A,120S,124V,128D,148V,154K,169F,178T,187D,203R,208G,225S,230I
MN789619	PG15-UG001159	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,27I,31G,50G,54M,58I,59I,71D,83L,86I,87Q,98D,111P,116A,120S,126I,128D,148V,154K,169F,178T,199R,200N,207T,208G,225S,230I
MN789545	PG15-UG001160	Uganda	2015		genomic RNA		subtype: AD	1	231	2V,6A,9H,11T,15L,26A,30R,31G,54M,58V,71D,79D,83L,92P,107S,111I,115M,120S,148V,153V,154K,169F,178T,183S,200S,203R,207A,208G,210S
MN789168	PG15-UG001161	Uganda	2015		genomic RNA		subtype: A	1	231	6A,14P,15L,27I,30R,31G,48I,54M,58I,71D,79D,83L,92P,96L,111P,120G,128D,148V,154K,169F,178T,180D,200S,203R,208G
MN789120	PG15-UG001162	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,15V,26A,27I,30R,31G,54M,58I,71D,79D,83I,111T,116A,120G,128D,148V,154K,169F,171C,180D,183S,200S,203R,207S,208G,210S,225S
MN790042	PG15-UG001163	Uganda	2015		genomic RNA		subtype: AD	1	231	3M,6A,11I,12Y,15L,27I,30R,31G,33N,54M,58I,71D,83L,87Q,92P,96I,111P,115V,116A,128D,148V,154K,169F,179S,180D,191I,200S,203R,207A,208G,210S
MN789181	PG15-UG001164	Uganda	2015		genomic RNA		subtype: A	1	231	6A,15L,27I,58V,71D,83L,92P,111P,115V,116A,120G,128D,148V,154K,165I,169F,171A,180D,187D,204G,207T,208G,225S
MN789741	PG15-UG001165	Uganda	2015		genomic RNA		subtype: D	1	231	6V,14P,15L,16T,27I,41T,50S,83L,87Q,91V,96L,110N,120S,148V,154K,180D,208S,210S,225S,230I
MN790021	PG15-UG001167	Uganda	2015		genomic RNA		subtype: AC	1	231	6L,15V,27I,45D,58I,71D,91V,116A,120S,124V,128D,148V,154K,169F,178T,203R,204G,207T,208G
MN788841	PG15-UG001168	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,11I,27I,41T,83M,116A,120S,148V,180D,208G
MN789025	PG15-UG001170	Uganda	2015		genomic RNA		subtype: D	1	231	6A,14P,15V,27I,54M,58I,71D,83L,91V,111P,116A,120G,123A,128D,148V,153V,154K,169F,171I,178T,183H,191I,200S,207T,208G,225S
MN789967	PG15-UG001171	Uganda	2015		genomic RNA		subtype: A	1	231	6A,14T,15L,27I,54M,58I,71D,83L,92P,96I,111S,115L,116Q,120G,128D,148V,153V,154K,169F,171I,178T,183H,191I,200S,207T,208G
MN789387	PG15-UG001173	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,15L,27I,33N,41T,83L,120S,148V,180D,207T,208G,225S
MN789575	PG15-UG001174	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,14S,15L,27I,41T,83L,87Q,91V,120S,148V,154K,180D,208G
MN788846	PG15-UG001175	Uganda	2015		genomic RNA		subtype: D	1	231	6L,14P,27I,41T,50S,54C,59I,83I,91A,110N,120S,128D,148V,208G,225S
MN788916	PG15-UG001178	Uganda	2015		genomic RNA		subtype: ADG	1	231	6L,14P,33N,83L,120S,123A,148V,180D,199R,225S
MN790014	PG15-UG001180	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,11I,14S,15M,27I,31G,41T,58I,71D,83M,91V,111T,115M,116A,120S,128D,148V,169F,180D,183G,200S,203R,207A,208G,210S
MN789842	PG15-UG001182	Republic of the Cong	2015		genomic RNA		subtype: C	1	231	6L,14P,17A,27I,41T,71D,83L,91A,96V,116A,120S,128D,148V,169F,180D,187D,190M,208G
MN789459	PG15-UG001183	Kenya	2015		genomic RNA		subtype: AD	1	231	3I,6A,13N,14P,15L,27I,29D,31G,33N,47C,48I,54M,58I,71D,91P,96I,111P,116A,120G,128D,148V,154K,169F,171C,180D,187D,200S,203R,207S,208G,225S
MN790018	PG15-UG001185	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,14P,15L,27I,31G,33N,48I,54M,58I,71D,83L,87Q,92P,96L,111P,120G,128D,148V,169F,171V,178T,187D,199R,200A,203R,207T,208G,225S
MN789086	PG15-UG001186	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,14N,15L,27I,54M,58I,71D,83L,86I,91V,111P,116A,120G,128D,148V,153V,154K,169F,171I,178T,183G,200S,203R,207A,208G,210S,225S
MN789127	PG15-UG001187	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,11I,12Y,15M,27I,30R,54M,58I,71D,79D,83L,86P,87Q,96I,98D,111P,116A,120S,148V,169F,171A,180D,183H,204G,207T,208G,210S
MN789171	PG15-UG001188	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11T,15L,27I,31G,45D,48I,54M,58I,71D,83T,92P,116A,118I,120G,128D,148V,169F,171C,180D,190M,199R,200A,203R,207T,208G,225S
MN789176	PG15-UG001192	Uganda	2015		genomic RNA		subtype: A	1	231	6A,14P,15L,27I,54M,58I,71D,79D,83L,87Q,92P,96L,111P,120G,148V,154K,169F,178T,191I,200S,203R,208G
MN789765	PG15-UG001196	Uganda	2015		genomic RNA		subtype: A	1	231	6A,14P,15L,27I,54M,58V,71D,83L,86A,92P,96I,111P,120G,128D,148V,154K,169F,178T,200S,208G,225S
MN789780	PG15-UG001197	Uganda	2015		genomic RNA		subtype: AC	1	231	6L,14P,15L,16T,27I,29D,41T,71D,83L,96I,110N,116T,120S,128D,148V,169F,178T,203R,208G,210S,225S
MN789616	PG15-UG001198	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,27I,30R,41A,50S,54S,83L,91V,120S,141V,148V,154K,180D,225S
MN789588	PG15-UG001199	Uganda	2015		genomic RNA		subtype: ACD	1	231	6L,11I,27I,50G,83L,91V,96I,116T,120S,128D,148V,180D
MN788849	PG15-UG001204	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,11I,14N,15L,27I,54M,58I,71D,83L,91V,111P,116A,120S,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G,210S
MN789283	PG15-UG001205	Nigeria	2015		genomic RNA		subtype: A	1	231	6A,11I,15V,27I,31G,48V,54M,58I,59I,71D,83L,87Q,92Q,96L,111I,118I,120G,148V,169F,178T,180D,187D,203R,208G,225S
MN789770	PG15-UG001206	Uganda	2015		genomic RNA		subtype: A	1	231	2V,6A,11I,15L,27I,30R,31G,48A,54M,58I,71D,83L,92P,111P,116A,120G,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G
MN789270	PG15-UG001212	Uganda	2015		genomic RNA		subtype: A	1	231	6A,10P,13S,14P,15M,27I,30R,31G,44A,47T,54M,58I,59I,71D,78V,83L,92P,110N,111V,116A,120G,124V,128D,148V,154K,169F,180D,200S,207T,208G,210S
MN789743	PG15-UG001217	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,12Y,14T,15L,27I,31G,54M,58I,71D,83M,91M,110N,111T,115L,120S,148V,154K,169F,178T,180D,200S,203R,207T,208G,225S
MN789152	PG15-UG001229	Uganda	2015		genomic RNA		subtype: A	1	231	3I,6S,15L,27I,30R,31G,48I,49S,54M,58I,59I,71D,83L,92P,111P,116A,120G,128D,148V,154K,169F,178T,183G,191I,200S,203R,207S,208G
MN789276	PG15-UG001230	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,11I,14S,15L,27I,50G,54M,58V,71D,79D,83L,87Q,92P,96L,111P,115L,120G,148V,154K,169F,171V,183G,187D,207T,208G
MN790150	PG15-UG001240	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11M,14P,15M,27I,31G,54M,58I,71D,83I,87Q,92P,110N,111V,113D,120S,128D,148V,154K,169F,178T,183G,200C,203R,207S,208G,225S
MN789633	PG15-UG001244	Uganda	2015		genomic RNA		subtype: CD	1	231	6A,27I,31N,41T,71D,83L,91V,115V,116A,120G,148V,169F,178T,180D,187D,203R,208G
MN790009	PG15-UG001245	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,11I,15V,27I,54M,58I,71D,83L,86P,87Q,96I,98D,111I,116A,120G,128D,148V,169F,171A,178T,180D,200S,203R,207S,208G,225S
MN789416	PG15-UG001246	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,27I,36I,41T,83L,87Q,91V,98D,120S,135V,148V,208G,210S,225S,230I
MN788825	PG15-UG001248	Uganda	2015		genomic RNA		subtype: D	1	231	2L,6L,11I,12Y,14T,15L,27I,30R,36I,41T,59I,83L,91V,110N,115V,116A,120S,124T,148V,180D,191I,200N,208G,225S
MN789685	PG15-UG001249	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,27I,41T,83L,91V,110S,120S,148V,180D,203R,208G
MN790124	PG15-UG001250	Uganda	2015		genomic RNA		subtype: A	1	231	6G,11I,12Y,15L,54M,58V,71D,83A,87Q,92P,96L,107S,110S,111V,115V,120G,131R,148V,154K,169F,171A,178T,180D,200S,203R,204G,207A,208G,210S
MN790047	PG15-UG001255	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,9H,15L,27I,30R,31G,54M,58I,71D,83L,87Q,92P,96L,98D,103E,111P,113D,116R,120S,124V,128D,148V,154K,169F,178T,183G,203R,208G,225S
MN788993	PG15-UG001256	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11T,12Y,14G,15M,27I,30R,31G,54M,58I,71D,83L,91V,100T,111P,115V,116A,120G,123G,128D,139H,148V,154K,163E,169F,180D,183G,187D,191I,207T,208G,225S
MN789096	PG15-UG001259	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,14P,15L,16T,26A,27I,30R,31G,54M,58I,71D,79D,83L,92P,111P,120S,148V,153V,154K,169F,171I,178T,180D,187D,200S,207T,208G,225S
MN789724	PG15-UG001262	Uganda	2015		genomic RNA		subtype: A	1	231	2V,3I,6A,11I,14N,15L,26A,27I,36I,45D,50Y,54M,58I,71D,83L,87Q,92P,96I,111P,116A,128D,148V,154K,169F,171A,178T,180D,183H,200A,203R,207T,208G
MN789895	PG15-UG001263	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,14P,15L,16T,27I,31G,33N,41T,83L,86A,87Q,91V,110N,120S,148V,183S,187D,191I,207S,208G,210S,225S
MN790113	PG15-UG001265	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,11I,15L,27I,30R,31G,54M,58I,59I,71D,83L,87Q,92P,96I,111I,116A,120G,128D,129L,148V,154K,169F,178T,183G,200S,203R,207S,208G
MN789876	PG15-UG001267	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,15V,30R,31G,58I,71D,83L,86T,87Q,92P,96L,111I,128D,148V,169F,178T,183G,191I,200S,203R,207S,208G
MN790120	PG15-UG001269	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,14G,15L,26A,27I,30R,31G,45D,54M,58I,71D,83L,87Q,92P,96L,111T,120G,148V,153V,154K,169F,171I,178T,183G,187D,200S,203R,208G
MN789658	PG15-UG001272	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,14G,15L,27I,30R,31G,50G,54M,58I,71D,79D,83L,87Q,92P,96I,98D,111P,120G,148V,154K,169F,178T,183G,187D,200S,203R,208G,210S,225S,230I
MN789102	PG15-UG001273	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,14S,15L,27I,50G,52M,54M,58V,71D,83L,96I,111P,115V,116A,120G,128D,148V,154K,169F,180D,207T,208G
MN789716	PG16-UG000001	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11T,14N,15L,27I,50G,54M,58V,71D,83M,87Q,92P,96L,98X,99X,100X,101X,111T,115V,120G,148V,154K,169F,178T,183S,187D,200S,208G,210S
MN789970	PG16-UG000002	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,14P,27I,83I,91V,110N,120S,148V,180D,225S
MN788907	PG16-UG000004	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,10W,11T,15V,27I,30R,41T,54M,58I,83M,91V,96L,111I,120S,148V,180D,203R,204G,208G,225S
MN789645	PG16-UG000006	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,10T,15L,27I,83L,87Q,91H,92P,112A,116A,148V,180D,208Q,225S
MN789676	PG16-UG000007	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,15L,27I,83L,87Q,91H,92P,112A,116A,148V,180D,208Q,225S
MN789298	PG16-UG000013	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11M,14S,15L,27I,29D,54M,58I,71D,83T,87Q,96I,111P,115V,116A,120G,128D,148V,153V,154K,169F,171I,180D,183G,200S,207T,208G
MN789774	PG16-UG000014	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,14G,15L,27I,30R,31G,41T,45D,50G,54M,58I,71D,83L,87Q,91V,92P,96L,111P,128D,148V,154K,169F,180D,183G,191I,200S,203R,207S,208G
MN789605	PG16-UG000017	Uganda	2012		genomic RNA		subtype: AD	1	231	14S,15L,27I,45D,50S,54S,68I,83L,91V,96L,116A,120A,123A,128D,148V,180D,210S,225S
MN789986	PG16-UG000018	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,11I,14N,15L,27I,41A,54M,56M,58I,71D,83L,87Q,96I,98D,111I,116R,120S,128D,148V,154K,169F,178T,200S,203R,207A,208G
MN789380	PG16-UG000019	Uganda	2012		genomic RNA		subtype: A	1	231	6A,14T,15L,27I,50G,54M,58I,71D,83L,111P,116A,120G,128D,148V,154K,169F,178T,183G,200S,203R,204G,207A,208G
MN789204	PG16-UG000024	Uganda	2012		genomic RNA		subtype: ACD	1	231	6L,15L,27I,83L,87Q,91V,110N,116A,120S,148V,180D,208G,225S
MN789624	PG16-UG000025	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,12Y,15L,33N,54M,58V,71D,83L,92P,107S,111M,115V,120S,131R,148V,169F,171A,178T,200S,203R,207A,208G
MN788868	PG16-UG000029	Uganda	2012		genomic RNA		subtype: AD	1	231	6A,11M,15L,26A,27I,30R,31G,54M,58I,71D,83L,87Q,91V,111P,116A,128D,148V,154K,169F,171C,178T,183G,200S,203R,207T,208G,225S
MN789671	PG16-UG000035	Uganda	2012		genomic RNA		subtype: A	1	231	6A,10P,15L,26A,27I,30R,31G,54M,58I,71D,79D,83L,92P,111P,120G,148V,154K,169F,171V,180D,183S,200S,203R,207S,208G
MN788966	PG16-UG000037	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,14T,15L,27I,54M,58I,71D,83L,91V,111P,116A,120G,123A,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G
MN789129	PG16-UG000038	Uganda	2012		genomic RNA		subtype: ACD	1	231	6A,12L,14T,15L,27I,31G,33N,41A,54M,58I,86A,87Q,91F,92P,96I,111P,115L,116T,128D,132K,148V,154K,169F,178T,183S,200S,203R,207T,208G
MN789680	PG16-UG000039	Uganda	2012		genomic RNA		subtype: A	1	231	6A,15L,27I,30R,31G,54M,58I,71D,92P,111I,113D,120G,128D,154K,169F,178T,183G,200S,203R,207S,208G
MN789136	PG16-UG000040	Uganda	2012		genomic RNA		subtype: A	1	231	6A,11I,15V,27I,54M,58I,71D,83L,111I,116A,120G,128D,148V,153V,154K,163E,169F,171I,178T,183G,207T,208G,225S
MN789322	PG16-UG000043	Uganda	2012		genomic RNA		subtype: D	1	231	6L,27I,50HLPR,83L,91V,118I,120G,148V,180D,208G,225S
MN789678	PG16-UG000046	Uganda	2012		genomic RNA		subtype: AD	1	231	6L,27I,91V,116N,120S,148V,180D,225S
MN789163	PG16-UG000048	Uganda	2013		genomic RNA		subtype: ACF	1	231	6A,11I,15L,27I,50S,54M,58V,71D,83L,91V,111P,116A,120G,128D,148V,154K,169F,178T,183G,208G,210S
MN789712	PG16-UG000049	Uganda	2013		genomic RNA		subtype: ACD	1	231	6L,15L,27I,41A,75D,83L,91H,96L,120S,124V,148V,160S,183S,208G,225S
MN790001	PG16-UG000050	Uganda	2013		genomic RNA		subtype: AC	1	231	6A,11I,15V,27I,48L,54M,58I,71D,83L,87Q,96I,111I,116A,118T,120S,128D,148V,154K,169F,178T,183G,187D,200V,203R,204G,208G,225S
MN789667	PG16-UG000051	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11M,14G,15L,26A,27I,30R,31G,54M,58V,71D,83L,92P,111P,115V,120G,128D,148V,169F,171V,178T,183G,200S,203R,207A,208G,210S,225S
MN790167	PG16-UG000052	Uganda	2013		genomic RNA		subtype: AD	1	231	2V,6A,11I,14T,15L,27I,54M,58I,71D,83L,92P,111P,120G,128D,148V,153V,154K,169F,171I,178T,183G,200S,203R,207T,208G
MN789596	PG16-UG000055	Uganda	2013		genomic RNA		subtype: ACD	1	231	6A,15V,27I,54M,58I,71D,86I,87Q,111P,116A,120G,128D,148V,154K,169F,178T,180D,187D,203R,210S
MN789687	PG16-UG000056	Uganda	2013		genomic RNA		subtype: A	1	231	6A,10A,14T,27I,31G,58I,71D,79D,83L,92P,111I,128D,148V,154K,169F,178T,183G,187D,200S,203R,208G
MN789731	PG16-UG000057	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11I,14S,15L,27I,50G,54M,58I,71D,83L,91V,92Q,111I,116A,120S,128D,131R,148V,154K,169F,178T,180D,191I,203R,204G,207S,208G
MN789812	PG16-UG000059	Uganda	2013		genomic RNA		subtype: AC	1	231	6L,13N,14P,15L,27I,29D,41T,68I,71D,83L,91V,110N,116A,120A,128D,148V,169F,180D,187D,203R,208G,210S,225S
MN788759	PG16-UG000064	Uganda	2013		genomic RNA		subtype: A	1	231	6A,10P,11M,12X,13X,14X,15K,16A,27I,30R,31G,48A,54M,58I,71D,83L,87Q,91V,92P,96I,111P,116V,120R,128D,148V,154K,169F,178T,183G,200S,203R,207T,208G,225A
MN789909	PG16-UG000065	Uganda	2013		genomic RNA		subtype: CD	1	231	6L,15L,33N,44A,83M,120S,148V,183G,194S,208G,230I
MN789853	PG16-UG000067	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,14N,15L,27I,50S,54M,58I,71D,83L,111P,116A,120S,128D,148V,153V,154K,169F,171I,178T,187D,191I,200S,204S,208G
MN789738	PG16-UG000068	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,41T,83L,91V,120S,148V,180D,199R,208G
MN789684	PG16-UG000069	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11M,13N,15L,27I,30R,31G,48I,54M,58I,71D,83L,87Q,92P,96I,111T,116A,120S,128D,148V,154K,169F,178T,183G,200S,203R,208G,210S
MN789732	PG16-UG000070	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,83L,110S,116A,120G,123A,148V,180D,208G
MN789268	PG16-UG000071	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,15L,27I,54M,58V,71D,83L,92P,107S,110N,111T,116A,120G,123A,128D,131R,148V,154K,169F,171A,178T,190M,191I,200A,205FL,206X,208G
MN789507	PG16-UG000073	Uganda	2013		genomic RNA		subtype: A	1	231	4P,6P,11T,12Y,14P,15V,26A,27I,30R,31G,54M,58V,83L,86A,87T,92P,96L,98D,111P,120G,128D,148V,154K,169F,171V,180D,187D,191I,200S,203R,207T,208G
MN789631	PG16-UG000076	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,15L,27I,41T,148V,180D,208G
MN789898	PG16-UG000079	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11I,14S,15L,27I,31S,47C,54S,58V,71D,83L,92P,111I,116A,120G,128D,148V,169F,171V,178T,183G,200S,203R,208G,210S,225S
MN789232	PG16-UG000080	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,15L,27I,41T,83M,91A,120S,148V,183G,191I,208G,225S
MN790132	PG16-UG000081	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,14P,15M,17A,27I,41T,83L,91T,110N,120S,148V,180D,203R,208G,210S,225S
MN790157	PG16-UG000085	Uganda	2013		genomic RNA		subtype: AD	1	231	3M,6A,11T,12Y,14S,15L,27I,31G,33N,52M,54M,58V,71D,83L,87P,88V,91L,92P,96L,111P,115V,120G,128D,148V,154K,169F,171V,180D,187D,200S,207T,208G,210S,225S
MN788889	PG16-UG000086	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11I,12L,14T,15L,27I,31N,54M,58I,71D,83L,91V,92P,96L,111P,115L,120S,128D,148V,154K,163E,169F,178T,180D,200S,203R,207T,208G,215L
MN789090	PG16-UG000089	Uganda	2013		genomic RNA		subtype: A	1	231	2V,6A,14P,15L,27I,31G,54M,58I,71D,79D,83L,86I,92P,111P,148V,154K,167K,169F,178T,200S,207T,208G
MN789417	PG16-UG000090	Uganda	2013		genomic RNA		subtype: D	1	231	6L,27I,41T,83L,86A,87Q,91V,98D,116A,120S,124V,148V,154K,183G,208G,225S,230I
MN789409	PG16-UG000093	Uganda	2013		genomic RNA		subtype: AC	1	231	6A,12L,14S,15L,27I,30R,41A,54M,56M,58I,71D,83T,87P,91L,111P,115L,116A,120G,128D,148V,154K,169F,177G,180D,187D,200H,207A,208G
MN788961	PG16-UG000095	Uganda	2013		genomic RNA		subtype: A	1	231	6A,15V,26A,30R,31G,54V,58V,71D,83L,92P,120S,128D,129L,148V,154K,169F,177G,187D,200A,203R,207A,208G,225S
MN790040	PG16-UG000096	Uganda	2013		genomic RNA		subtype: ACD	1	231	6A,14H,15L,27I,31G,33N,54M,58I,71D,83L,86I,111P,116A,120A,128D,148V,154K,169F,178T,183G,200S,203R,207T,208G
MN788967	PG16-UG000097	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11I,14S,15L,27I,54M,58I,83L,96L,111P,115V,116A,128D,148V,169F,171A,178T,180D,200S,203R,207T,208G
MN788736	PG16-UG000099	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,14T,15L,27I,29D,41T,75D,83L,87Q,91V,96L,120S,148V,170R,180D,207S,208G,225S
MN788962	PG16-UG000101	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,41A,45D,54S,68I,83I,116A,120A,124V,128D,148I,154K,180D,225S
MN789158	PG16-UG000105	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11I,14T,15L,27I,30R,31G,54M,58I,71D,83L,92P,111V,120G,128D,129L,148V,154K,169F,178T,180D,200S,203R,207A,208G,225S
MN789976	PG16-UG000107	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,9H,27I,41T,50G,59I,83L,87Q,91V,96L,116T,120S,124V,128D,146C,148V,208G,225S
MN789316	PG16-UG000108	Uganda	2013		genomic RNA		subtype: AC	1	231	6A,14S,15L,27I,31G,54M,58I,71D,83L,92P,111V,113D,128D,148V,154K,169F,178T,180D,200A,207S,208G,230I
MN789570	PG16-UG000113	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,41T,50S,54S,83L,87Q,91V,96I,116A,148V,180D,183T,225S
MN789736	PG16-UG000116	Uganda	2013		genomic RNA		subtype: D	1	231	6L,27I,83L,148V,225S
MN788904	PG16-UG000117	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,83L,148V,180D
MN790171	PG16-UG000118	Uganda	2013		genomic RNA		subtype: AD	1	231	5S,6A,10P,11I,14V,15M,27I,54M,58I,83L,87Q,92P,110N,116A,120S,148V,178T
MN789788	PG16-UG000119	Uganda	2013		genomic RNA		subtype: AC	1	231	6A,14N,15L,27I,50G,54M,58I,59I,71D,83Q,87Q,91V,96I,111I,115L,116A,120S,148V,169F,178T,180D,203R,207A,208G
MN788840	PG16-UG000121	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11I,15L,27I,30R,31G,54M,58I,71D,83I,92P,111I,115M,120S,128D,148V,154K,169F,183G,200S,203R,207S,208G
MN789994	PG16-UG000122	Uganda	2013		genomic RNA		subtype: AD	1	231	2V,6A,10P,14S,15L,27I,29D,54M,58I,71D,83L,86A,87Q,91F,92P,96L,98D,111P,120G,128D,131R,148V,154K,169F,178T,199R,200S,203R,207T,208G,230I
MN789845	PG16-UG000125	Uganda	2013		genomic RNA		subtype: ADG	1	231	6A,31G,54M,58I,75D,83L,92P,120S,128D,148V,154K,160S,169F,178T,180D,200N,203R,207A,208G,211I,225S
MN789686	PG16-UG000126	Uganda	2013		genomic RNA		subtype: A	1	231	6A,10W,11I,14N,15L,27I,45D,50Y,54S,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,183G,199R,200S,203R,207S,208G,210S,225S
MN789028	PG16-UG000128	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11I,15L,26A,27I,30R,31G,54M,58I,71D,92Q,111I,120H,148V,154K,169F,178T,183S,187Q,200A,203R,208G,225S
MN789272	PG16-UG000131	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,12Y,15L,33N,41T,83L,86A,87Q,91L,92P,96I,110N,116T,120S,148V,177T,180D,208G,225S
MN789040	PG16-UG000132	Uganda	2013		genomic RNA		subtype: AC	1	231	6P,14P,27I,41T,71D,83L,86A,87Q,91V,98D,110S,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
MN789773	PG16-UG000134	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,78G,83L,116A,120S,148V,180D,183T,225S
MN790022	PG16-UG000135	Uganda	2013		genomic RNA		subtype: A	1	231	6V,10A,12F,15L,27I,30R,31G,54M,58I,59I,71D,83L,92P,111P,120G,128D,148V,154K,169F,171C,178T,183G,200N,203R,208G,210S
MN789835	PG16-UG000137	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,41T,83T,87Q,91V,95H,96I,98D,116T,148V,180D,208G,225S
MN789321	PG16-UG000138	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,41T,83L,120S,148V,180D,199R,200N,225S
MN790106	PG16-UG000140	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,41T,83L,116A,120S,148V,180D,199R,200N,225S
MN789972	PG16-UG000141	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,15L,27I,41T,83L,87Q,91Y,92P,93A,105V,107A,120S,148V,154K,177S,208G,210S,225S
MN788866	PG16-UG000143	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,41T,83M,120S,148V,180D,199R,200N,225S
MN789614	PG16-UG000145	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11I,13N,14P,15L,27I,54M,58I,71D,83M,87Q,96I,110N,111T,116A,120G,148V,154K,169F,171A,178T,183G,200S,203R,207A,208G
MN789794	PG16-UG000146	Uganda	2013		genomic RNA		subtype: AD	1	231	6P,11I,14P,15M,27I,48L,54M,58I,71D,83L,86I,87Q,92P,96I,111P,116A,120G,128D,148V,154K,169F,171A,180D,183G,187D,200S,203R,207A,208G,225S
MN789477	PG16-UG000147	Uganda	2013		genomic RNA		subtype: A	8	231	11I,13N,14P,15L,27I,54M,58I,62X,63X,64X,65X,66X,67X,68X,69X,70X,71X,72X,73X,74X,75X,76X,77X,78X,79X,80X,81X,82X,83X,84X,85X,86X,87X,88X,89X,90X,91X,92X,93X,94X,95X,96X,97X,98X,99X,100X,101X,102X,103X,111T,116A,120G,148V,154K,169F,171A,178T,180D,183G,203R,207A,208G,225S,230I
MN789968	PG16-UG000149	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,14N,27I,83L,86P,87Q,91V,96I,98D,116T,120S,148V,180D,230I
MN789047	PG16-UG000156	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,75D,83L,86A,87Q,91V,98D,120S,148V,177C,180D,225S
MN789312	PG16-UG000160	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,41T,71D,79D,83L,120S,148V,154K,177C,180D,188S,203R,208G,210S,230I
MN789990	PG16-UG000163	Uganda	2013		genomic RNA		subtype: AC	1	231	6L,14P,15M,27I,41T,56F,71D,83L,86A,87Q,91V,96I,116T,120S,148V,154K,169F,178T,203R,204G,207Q,208G
MN789913	PG16-UG000164	Uganda	2013		genomic RNA		subtype: D	1	231	6L,15L,27I,41T,83L,87Q,110S,120S,148V,180D,191I,208G,225S
MN789339	PG16-UG000167	Uganda	2013		genomic RNA		subtype: AC	1	231	6A,11I,14S,15L,27I,50S,54M,58V,71D,83L,91V,111P,116A,120G,128D,148V,154K,169F,178T,183G,203R,208G,210S,217S
MN789346	PG16-UG000170	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11I,14S,15L,31G,54M,58I,92P,111T,120S,128D,148V,154K,169F,171V,178T,183G,200S,207S,208G,225S
MN788813	PG16-UG000171	Uganda	2013		genomic RNA		subtype: A	1	231	6A,14G,15V,27I,31G,50G,54M,58I,71D,79D,83L,91V,92P,111P,116A,120G,124V,128D,148V,154K,169F,177C,178T,183G,200S,203R,207T,208G
MN789730	PG16-UG000172	Uganda	2013		genomic RNA		subtype: CD	1	231	6L,14N,15L,27I,41T,83L,116A,120S,148V,154K,180D,225S
MN788791	PG16-UG000181	Uganda	2013		genomic RNA		subtype: CD	1	231	6L,11I,14P,27I,41T,50T,83L,91N,92P,116A,120S,128D,148V,154K,180D
MN789635	PG16-UG000182	Uganda	2013		genomic RNA		subtype: CD	1	231	6L,14N,15L,27I,41T,83L,116A,120S,148V,154K,180D,225S
MN790031	PG16-UG000190	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11T,14S,15L,27I,54M,58I,71D,83L,87Q,92P,96I,98D,111I,116A,120A,128D,148V,154K,169F,171V,178T,180D,200S,203R,210S
MN790097	PG16-UG000191	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11I,15L,26A,27I,30R,31G,50G,54M,58I,59I,71D,79D,83L,92P,111P,120S,148V,154K,163E,169F,178T,200S,203R,207S,208G,225S
MN789450	PG16-UG000199	Uganda	2013		genomic RNA		subtype: AD	1	231	6M,27I,41T,50S,83I,91V,110N,116A,120S,124V,148V,180D,191I,194T,208G,225S
MN790038	PG16-UG000202	Uganda	2013		genomic RNA		subtype: AC	1	231	6L,27I,36I,41T,71D,83L,86A,87Q,91V,98D,116A,120A,128D,148V,169F,178T,180D,187D,203R,208G,225S,230I
MN789227	PG16-UG000203	Uganda	2013		genomic RNA		subtype: A	1	231	6A,9H,11M,15L,26A,27I,30R,31G,54M,58I,71D,78X,79X,80X,81X,82X,83X,84X,85X,86X,87X,88X,89X,92P,96I,111T,116A,128D,148V,154K,169F,171V,178T,183G,200S,203R,207H,208G
MN789491	PG16-UG000204	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,14P,15L,16T,27I,29D,31Q,41T,59I,83L,96L,110N,116A,120H,128D,148V,154K,178T,203R,225A
MN790007	PG16-UG000205	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,41T,83L,86Q,87Q,91V,120S,148V,180D,183T,208G,225S
MN789173	PG16-UG000206	Uganda	2013		genomic RNA		subtype: D	1	231	6L,14T,15L,27I,50G,83L,87Q,91V,116A,120S,128D,148V,178T,183R
MN789707	PG16-UG000210	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11I,14N,15L,27I,54M,58I,71D,83L,111P,116A,120G,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G
MN790188	PG16-UG000211	Uganda	2013		genomic RNA		subtype: AC	1	231	6A,11M,15L,27I,36I,48I,54M,58I,71D,83I,87Q,91V,96I,111P,115V,116A,120G,128D,148V,154K,169F,171A,178T,180D,187D,200S,207T,208G
MN790101	PG16-UG000215	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11I,14N,15L,27I,54M,58I,71D,83L,86I,91V,111P,116A,120A,128D,148V,154K,169F,178T,183G,191I,199R,207T,208G
MN788871	PG16-UG000216	Uganda	2013		genomic RNA		subtype: D	1	231	6L,27I,41A,83L,91V,116A,120S,125Q,148V,178T,225S
MN788987	PG16-UG000217	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,15L,41T,68I,71D,78V,83L,92P,120S,128D,148V,169F,178T,187D,200S,208G,225S
MN789652	PG16-UG000218	Uganda	2013		genomic RNA		subtype: A	1	231	6A,13S,14P,27I,54M,58I,71D,87Q,96I,110N,111I,116A,120S,148V,169F,178T,183G,200S,203R,207T,208G
MN789226	PG16-UG000220	Uganda	2013		genomic RNA		subtype: A	1	231	6T,11I,12Y,27I,31G,54M,58I,71D,83I,92P,96I,111T,120G,148V,154K,169F,178T,180D,200S,203R,207T,208G,225S
MN789474	PG16-UG000225	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11I,15L,27I,30R,31G,50T,54M,58I,71D,83L,87Q,92P,96L,110N,111I,115V,120S,128D,148V,154K,169F,178T,180D,187D,200S,203R,208G,225S
MN788752	PG16-UG000226	Uganda	2013		genomic RNA		subtype: A	1	231	6A,11I,15L,27I,30R,31G,50T,54M,58I,71D,87Q,92P,96L,111I,115V,120G,128D,148V,154K,169F,178T,180D,187D,200S,203R,208G,225S
MN790202	PG16-UG000229	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,27I,75D,83L,116A,120S,148V,154K,171V,177G,180D,183DHNY,208G,225S
MN790100	PG16-UG000231	Uganda	2013		genomic RNA		subtype: AD	1	231	6L,15L,27I,41T,83I,110S,120S,148V,180D,199R,208G,225S
MN789082	PG16-UG000232	Uganda	2013		genomic RNA		subtype: AD	24	231	27I,30R,31G,83L,111P,120G,128D,148V,154K,169F,178T,180D,191I,200S,203R,208G,225S
MN788942	PG16-UG000234	Uganda	2013		genomic RNA		subtype: ACDG	1	231	6L,15L,27I,41A,83L,91Y,110N,116A,120S,124V,148V,180D,208G,225S
MN788911	PG16-UG000237	Uganda	2013		genomic RNA		subtype: AD	1	231	6A,11I,14T,15F,27I,29D,31G,54M,58I,71D,83I,96I,111P,116A,120S,128D,148V,154K,169F,170R,178T,183G,200A,203R,207T,208G
MN789019	PG16-UG000242	Uganda	2013		genomic RNA		subtype: A	1	231	2V,6A,11I,15V,27I,50F,54M,58I,71D,83L,91V,96L,111P,120S,128D,148V,154K,169F,171V,178T,180D,187D,200S,203R,207S,208G
MN789145	PG16-UG000245	Uganda	2013		genomic RNA		subtype: ADH	1	231	6A,9H,15L,26A,27I,30R,31G,50G,54M,58V,71D,83L,91A,92P,111P,120G,128D,146C,148V,154K,169F,180D,200S,207S,208G,225S
MN789067	PG16-UG000248	Uganda	2016		genomic RNA		subtype: AD	1	231	6L,27I,75D,83L,116A,120S,148V,154K,171V,177G,180D,208G,225S
MN789961	PG16-UG000249	Uganda	2016		genomic RNA		subtype: A	1	231	2V,6A,11I,12Y,15F,16T,27I,30R,31G,48A,54M,58I,71D,83L,87Q,92P,96I,111P,115A,116A,120G,148V,154K,169F,171V,178T,183G,187D,200S,207T,208G,225S
MN788898	PG16-UG000254	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,12Y,14S,15M,27I,54M,58I,71D,83I,91V,96L,111P,115L,120S,148V,154K,169F,178T,183G,187D,203R,204G,208G
MN790046	PG16-UG000261	Uganda	2016		genomic RNA		subtype: AD	1	231	6A,15L,27I,30R,31G,50G,54M,58I,71D,83L,92P,111P,120G,128D,148V,154K,169F,177G,180D,200S,203R,208G,225S
MN789046	PG16-UG000262	Uganda	2016		genomic RNA		subtype: A	1	231	3M,6A,10P,11I,12Y,14S,15L,27I,54M,58V,71D,83L,86A,87Q,91F,92P,98D,111P,120G,128D,148V,154K,169F,171A,178T,180D,200A,207T,208G,225S
MN789803	PG16-UG000263	Uganda	2013		genomic RNA		subtype: A	1	231	6A,14V,15M,27I,54M,58I,71D,79D,83L,111P,116A,120A,148V,154K,169F,178T,183G,200S,203R,207A,208G,210S
MN789398	PG16-UG000265	Uganda	2016		genomic RNA		subtype: AD	1	231	2V,6A,11I,14N,15L,27I,50G,54M,58I,71D,83L,111P,116A,120A,128D,148V,154K,169F,178T,183G,200S,203R,208G
MN788830	PG16-UG000269	Uganda	2016		genomic RNA		subtype: D	1	231	6L,14P,15L,27I,44A,83L,87Q,96I,110N,115M,116A,120S,148V,180D,225S
MN788741	PG16-UG000271	Uganda	2016		genomic RNA		subtype: AD	1	231	6A,27I,54M,58I,83L,86A,87Q,91F,92P,95H,96L,98D,111M,115V,120G,128D,131R,148V,152E,154K,169F,171A,178T,183G,200N,203R,207T,208G,225S
MN788909	PG16-UG000273	Uganda	2016		genomic RNA		subtype: A	1	231	6A,27I,45D,54M,58I,71D,92P,120S,128D,148V,169F,171V,178T,183G,191I,207T,208G,225S,230I
MN788862	PG16-UG000274	Uganda	2016		genomic RNA		subtype: A	1	231	6A,11I,14P,15F,27I,31G,54M,58V,71D,83L,92P,128N,132G,148V,154K,160S,169F,178T,191I,200S,207S,208G
MN788827	PG16-UG000281	Uganda	2016		genomic RNA		subtype: AD	1	231	6L,15L,27I,41T,50T,83L,91V,98D,120S,148V,180D,199R,208G,210S,225S
MN788837	PG16-UG000283	Uganda	2016		genomic RNA		subtype: D	1	231	6L,27I,54L,79D,83T,86A,87Q,120G,123A,148V,170R,180D,208G,225S
MN788773	PG16-UG000284	Uganda	2016		genomic RNA		subtype: A	1	231	6A,11I,12Y,27I,30R,31G,54M,58I,59I,71D,79D,83L,86A,87Q,92P,111P,120S,124V,148V,154K,169F,178T,200S,203R,208G
MN789471	PG16-UG000286	Uganda	2016		genomic RNA		subtype: A	1	231	6A,11I,14T,27I,54M,58I,71D,83L,86X,87X,88X,89X,90X,91X,92X,93X,94X,95X,96X,97X,98X,99X,100X,101X,102X,103X,104X,105X,106X,111P,115V,116T,120G,128D,148V,153M,154K,169F,178T,183G,200S,203R,207T,208G,225S
MN789980	PG16-UG000288	Uganda	2016		genomic RNA		subtype: AD	1	231	6L,16T,27I,50G,83T,91V,96L,111T,116A,120A,128D,148V,154K,180D,225S
MN790085	PG16-UG000294	Uganda	2016		genomic RNA		subtype: AD	1	231	3A,5S,6P,11I,14P,15L,27I,54M,58V,71D,83L,86A,91V,107S,111P,115V,116A,120G,124V,128D,148V,154K,169F,174S,178T,183T,200S,203R,207A,208G
MN788884	PG16-UG000297	Uganda	2016		genomic RNA		subtype: AD	1	231	2V,6L,15L,27I,50G,83L,86A,87Q,91L,95V,96L,116T,120S,148V,178T
MN789683	PG16-UG000298	Uganda	2016		genomic RNA		subtype: ACD	1	231	2V,6L,12Y,14N,15L,16T,27I,41T,91V,120Q,121T,148V,180D,225S
MN789752	PG16-UG000300	Uganda	2016		genomic RNA		subtype: A	1	231	6A,14S,15L,27I,30R,31G,54M,58I,71D,83L,92P,111P,128D,148V,154K,169F,180D,183G,200S,203R,207S,208G
MN789059	PG16-UG000301	Uganda	2016		genomic RNA		subtype: ADF	1	231	6L,27I,41T,71D,83L,91V,116A,120S,148V,180D
MN789353	PG16-UG000303	Uganda	2016		genomic RNA		subtype: D	1	231	6L,14S,15L,27I,83T,120H,148V,149G,154K
MN788845	PG16-UG000307	Uganda	2016		genomic RNA		subtype: AD	1	231	6A,11T,14S,15L,27I,31G,33N,50S,54M,58I,71D,83L,96L,111P,116A,120A,128D,129L,148V,154K,169F,178T,183G,200S,203R,207T,208G
MN789493	PG16-UG000308	Uganda	2016		genomic RNA		subtype: A	1	231	3M,6A,11I,14P,15L,26A,27I,30R,31G,54M,58I,71D,83L,87Q,92P,96L,110N,111I,115V,128D,148V,153V,154K,169F,178T,183G,200S,203R,207S,208G
MN788892	PG16-UG000309	Uganda	2016		genomic RNA		subtype: AD	1	231	6A,11I,15L,27I,30R,31G,54M,58I,71D,78V,83I,86A,87Q,91Y,92P,96I,111I,116A,128D,148V,154K,169F,178T,183S,200A,203R,207T,208G
MN788984	PG16-UG000316	Uganda	2016		genomic RNA		subtype: AD	1	231	6L,16T,27I,41T,83T,87Q,120S,148V,154K,180D
MN789871	PG16-UG000320	Uganda	2016		genomic RNA		subtype: AC	1	231	6L,14S,15L,17A,27I,41T,71D,78V,83L,91V,116A,120S,124V,148V,154K,169F,171C,178T,180D,187D,207T,208G
MN789469	PG16-UG000325	Uganda	2016		genomic RNA		subtype: AD	1	231	6L,15L,16T,27I,71D,83M,110S,120S,148V,154K,177G,180D,208G,225S
MN789065	PG16-UG000331	Uganda	2016		genomic RNA		subtype: A	1	231	6A,11I,12Y,14S,15F,27I,31G,48A,54M,58I,59I,71D,87Q,91L,92P,96L,111T,112H,120S,148V,154K,169F,178T,183G,200S,203R,207A,208G,225S
MN789509	PG16-UG000343	Uganda	2016		genomic RNA		subtype: AD	1	231	2L,6A,11T,12Y,14S,27I,36I,48P,71D,83L,87Q,91V,96I,98D,120S,141V,148V,169F,171V,178T,180D,199R,200N,225S
MN788815	PG16-UG000344	Uganda	2016		genomic RNA		subtype: AD	1	231	27I,41T,50H,56M,71D,83L,91V,110N,116A,120G,128D,148V,180D,203R
MN790048	PG16-UG000349	Uganda	2016		genomic RNA		subtype: A	1	231	6A,9H,15L,26A,27I,30R,31G,54M,58V,71D,79D,83L,92P,111P,120G,123A,128D,148V,154K,169F,171V,180D,191I,200S,203R,207A,208G,210S
MN789224	PG16-UG000353	Uganda	2016		genomic RNA		subtype: A	1	231	6A,11I,15V,16T,27I,48I,54M,58I,71D,83L,111P,116A,120G,128D,148V,154K,169F,178T,180D,191T,203R,208G
MN789256	PG16-UG000359	Uganda	2016		genomic RNA		subtype: CD	1	231	6A,27I,31N,41T,71D,83L,91V,107S,115V,116A,120G,148V,169F,178T,180D,187D,203R,208G
MN788848	PG16-UG000360	Uganda	2016		genomic RNA		subtype: D	1	231	6L,14S,15M,17A,27I,41T,83L,87Q,91V,120S,123A,148V,154K,180D,203R,225S
MN789008	PG16-UG000361	Uganda	2016		genomic RNA		subtype: A	31	231	81G,83L,86P,87Q,91V,96I,98D,111T,120S,128D,148V,154K,163E,169F,178T,180D,187D,203R,208G
MN789607	PG16-UG000362	Uganda	2016		genomic RNA		subtype: A	1	231	6A,11M,14P,15L,27I,31G,54M,58I,71D,79D,83L,87Q,92P,96I,98D,111P,116A,128D,148V,153V,154K,169F,171I,180D,203R,207S,208G,210S
MN788874	PG16-UG000363	Uganda	2016		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,29D,41T,83L,91Q,110N,116A,120G,148V,180D,225S
MN789916	PG16-UG000364	Uganda	2016		genomic RNA		subtype: AD	1	231	6L,14N,27I,83L,91A,120S,148V,180D,225S
MN789586	PG16-UG000367	Uganda	2016		genomic RNA		subtype: AD	1	231	6L,15L,27I,83L,91V,116A,148V,208G,225S
MN788786	PG16-UG000369	Uganda	2016		genomic RNA		subtype: A	16	231	27I,54M,58I,71D,83L,92X,93X,94X,95X,96X,97X,98X,99X,100X,101X,102X,103X,104X,105X,106X,107APST,111P,116A,120G,128D,148V,154K,169F,178T,200S,203R,207T,208G
MN790142	PG16-UG000371	Uganda	2016		genomic RNA		subtype: AD	1	231	6L,13N,14P,15L,27I,71D,83L,110N,116A,148V,154K,180D,225S
MN790168	PG16-UG000372	Uganda	2016		genomic RNA		subtype: AD	1	231	6A,11I,12Y,14S,15M,27I,31G,54M,58I,71D,79D,83L,87Q,91V,110N,111T,120S,148V,154K,169F,178T,183G,200A,203R,207A,208G,210S,225S
MN788783	PG16-UG000374	Uganda	2016		genomic RNA		subtype: AD	1	231	6L,14P,27I,41T,83L,87Q,91V,98D,120S,135V,148V,180D
MN788754	PG16-UG000376	Uganda	2016		genomic RNA		subtype: ACD	14	231	27I,41T,71D,79X,80X,81X,82X,83X,84X,85X,86X,87X,88X,89X,90X,91X,92X,93X,94X,95X,96X,97X,98X,99X,100X,101X,102X,103X,104X,105X,106X,107X,108X,109X,110X,111X,112X,113X,114X,115X,116X,117X,118X,119X,120S,128D,148V,154K,169F,178T,180D,203R,225S
MN788925	PG16-UG000378	Uganda	2016		genomic RNA		subtype: AD	1	231	6L,15L,27I,41T,75D,83L,91H,115V,116A,120G,148V,180D,208G
MN788939	PG16-UG000379	Uganda	2016		genomic RNA		subtype: A	1	231	6A,15V,27I,30R,31G,45D,54M,58I,71D,83L,92P,111I,115V,120S,128D,148V,153V,154K,169F,171I,178T,183G,200S,207T,208G
MN789867	PG16-UG000381	Uganda	2016		genomic RNA		subtype: AD	1	231	2V,5S,6A,10W,11I,15V,26A,27I,30R,31G,36I,50G,54M,58I,71D,83L,111P,116A,128D,148V,154K,169F,178T,183G,187D,203R,208G
MN789393	PG16-UG000382	Uganda	2016		genomic RNA		subtype: D	1	231	6A,14V,15L,27I,41T,50H,83Q,116A,120S,124V,148V,154K,178T,180D
MN789548	PG16-UG000384	Uganda	2016		genomic RNA		subtype: ACD	1	231	6A,11I,14P,15L,27I,30R,31G,54M,58I,71D,83L,92P,111P,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G
MN789823	PG16-UG000386	Uganda	2016		genomic RNA		subtype: A	1	231	6A,11I,15L,27I,30R,31G,54M,58I,71D,83L,87Q,92P,96L,111A,112P,115V,120G,128D,148V,154K,169F,178T,180D,200A,203R,206X,208G,210S,225S
MN789170	PG16-UG000387	Uganda	2016		genomic RNA		subtype: A	1	231	6A,11I,14S,15L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G
MN790051	PG16-UG000391	Uganda	2016		genomic RNA		subtype: A	1	231	6A,11I,12Y,14S,15L,27I,31G,41T,54M,58I,71D,79D,83L,87Q,92P,96L,111T,115L,120S,148V,154K,169F,178T,180D,187D,203R,207A,208G
MN789231	PG16-UG000392	Uganda	2016		genomic RNA		subtype: AD	1	231	2V,6L,14P,15L,27I,41T,50S,83L,91V,110N,116A,120G,128D,148V,154K,180D,225S
MN788739	PG16-UG000393	Uganda	2016		genomic RNA		subtype: AD	1	231	6L,27I,41T,83L,116A,124V,148V,154K,178T
MN789733	PG16-UG000395	Uganda	2016		genomic RNA		subtype: A	1	231	6A,11I,15L,27I,54M,58I,71D,83L,92P,111I,120G,128D,148V,154K,169F,171V,178T,183G,203R,204G,207S,208G
MN789578	PG16-UG000399	Uganda	2016		genomic RNA		subtype: D	1	231	6L,15L,27I,41T,83L,87Q,91V,110N,116A,148V,154K,180D
MN789038	PG16-UG000401	Uganda	2016		genomic RNA		subtype: A	1	231	6A,11I,14P,15L,27I,30R,31G,50G,54M,58I,71D,79D,83L,92P,111P,120S,148V,154K,169F,180D,200S,203R,207A,208G,210S,230I
MN788758	PG16-UG000402	Uganda	2016		genomic RNA		subtype: AD	1	231	6V,12Y,15L,27I,29D,31G,33N,54M,58V,71D,83L,92P,111P,115M,120G,123A,128D,148V,154K,169F,178T,200S,208G,225S
MN789763	PG16-UG000403	Uganda	2016		genomic RNA		subtype: AD	1	231	6A,16T,27I,30R,31G,50G,54M,58I,71D,83L,86A,87Q,91F,92P,96L,98D,111P,115V,116A,128D,148V,154K,169F,178T,180D,187D,200S,203R,207S,208G,225A
MN789735	PG16-UG000406	Uganda	2016		genomic RNA		subtype: AD	1	231	6A,11I,12Y,27I,33N,54M,58I,68I,71D,79D,83L,111P,115M,116A,120A,128D,148V,154K,169F,178T,183G,203R,208G
MN789124	PG16-UG000412	Uganda	2016		genomic RNA		subtype: A	1	231	6A,12L,14T,15L,27I,54M,58I,71D,83L,92P,111P,115L,120S,128D,148V,154K,169F,178T,180D,200S,203R,207A,208G,225S
MN788944	PG16-UG000413	Uganda	2016		genomic RNA		subtype: AD	1	231	6V,15L,27I,30R,54L,83M,120G,148V,180D,225S
MN789655	PG16-UG000418	Uganda	2016		genomic RNA		subtype: A	1	231	6L,14P,15V,27I,41T,50S,54S,83L,96R,116D,120G,128D,148V,180D,208G,210S,225S
MN789880	PG16-UG000421	Uganda	2016		genomic RNA		subtype: AD	1	231	6A,11T,12Y,15V,30R,31N,44A,54M,58I,71D,83L,92P,96L,111P,120A,148V,154K,169F,180D,183G,200S,203R,207T,208G
MN790079	PG16-UG000425	Uganda	2016		genomic RNA		subtype: AD	1	231	6A,11I,14S,15L,27I,58V,71D,83L,92P,111P,115V,120G,128D,148V,154K,169F,171A,178T,180D,183G,200S,207A,208G
MN790104	PG16-UG000426	Uganda	2016		genomic RNA		subtype: AD	1	231	3M,6A,11T,12Y,15V,30R,31N,44A,54M,58I,71D,83L,92P,96L,111P,120A,148V,154K,169F,180D,183G,200S,203R,207T,208G
MN790183	PG16-UG000427	Uganda	2016		genomic RNA		subtype: AD	1	231	6L,14P,15L,27I,41T,83L,86A,87Q,120S,148V,180D,208G
MN788843	PG16-UG000428	Uganda	2016		genomic RNA		subtype: ACD	1	231	6A,11I,12Y,15L,54M,58V,71D,83L,86A,87Q,91F,92P,96I,98D,111V,115V,116A,120G,123G,124V,128D,131R,148V,154K,169F,178T,180D,187D,191I,200S,203R,208G,225S
MN789116	PG16-UG000429	Uganda	2016		genomic RNA		subtype: AD	1	231	6A,14P,27I,41T,71D,83L,91V,110N,116A,120G,128D,136M,148V,154K,169F,180D,187D,203R,208G,225S
MN789222	PG16-UG000431	Uganda	2016		genomic RNA		subtype: A	1	231	3M,6A,11I,12Y,15L,27I,30R,31G,48V,54M,58I,71D,83L,87Q,91Y,92P,111P,120G,128D,148V,153V,154K,169F,171I,177G,178T,180D,200S,203R,207S,208G,225S
MN789005	PG16-UG000432	Uganda	2016		genomic RNA		subtype: AD	1	231	6A,11I,12Y,15L,27I,31G,33N,54M,58V,71D,83L,111P,116A,120G,128D,129L,148V,154K,169F,171V,178T,194S,225S
MN789951	PG16-UG000433	Uganda	2016		genomic RNA		subtype: AD	1	231	6L,15L,27I,41T,50S,83L,91Q,116A,120S,148V,180D
MN789813	PG16-UG000434	Uganda	2016		genomic RNA		subtype: AD	1	231	6A,11I,14S,15L,27I,31G,48V,54M,58I,59I,71D,83L,92P,96L,107I,111T,118I,120G,148V,154K,169F,180D,200S,203R,207S,208G
MN789837	PG16-UG000435	Uganda	2016		genomic RNA		subtype: A	1	231	6A,14S,15L,27I,50G,54M,58I,71D,83L,87Q,91V,96L,111P,116A,128D,131R,148V,152E,154K,169F,180D,183G,191I,200S,207T,208G
MN789296	PG16-UG000436	Uganda	2016		genomic RNA		subtype: D	1	231	6L,15L,27I,44A,45D,50T,68I,83L,91P,96L,128D,148V,154K,180D,187D,208G,210S
MN789484	PG16-UG000621	Uganda	2016		genomic RNA		subtype: ACD	1	231	6L,27I,41T,78G,83L,91V,120G,148V,154K,178T,183S,209C
MN789776	PG16-UG000622	Uganda	2016		genomic RNA		subtype: A	1	231	6A,11I,14P,15L,26A,27I,30R,54M,58V,59I,71D,83L,92P,111P,120G,128D,148V,152E,154K,169F,183G,187D,200S,203R,208G
MN789589	PG16-UG000623	Uganda	2016		genomic RNA		subtype: AD	1	231	6L,27I,41T,83L,87Q,91V,116A,118I,148V,180D,199R,208G
MN789934	PG16-UG000627	Uganda	2016		genomic RNA		subtype: AF	1	231	6L,11I,14P,16A,17A,28X,29X,30X,31X,32X,33X,34X,35X,36X,37X,38X,39X,40X,41X,42X,43X,44X,45X,46X,47X,48X,49APST,50H,66L,83L,86X,87X,88X,89X,90X,91X,92X,93X,94X,95X,96X,97X,98X,99X,100X,101X,102X,103X,104X,105X,106X,107X,108X,109X,110X,111X,112X,113X,114X,115X,116X,117X,118X,119X,120X,121X,122X,123X,124X,125X,126X,127X,128X,129X,135V,148V,154K,169F,178T,180D,200S,203R,208G
MN789829	PG16-UG000631	Uganda	2016		genomic RNA		subtype: A	1	231	6A,14N,15L,27I,54M,58I,71D,83L,92P,111P,115L,116Q,120G,128D,148V,154K,169F,180D,203R,204G,208G,210S,225S
MN788943	PG16-UG000632	Uganda	2016		genomic RNA		subtype: A	1	231	6A,11I,15L,26A,27I,30R,31G,49S,50H,54M,58V,71D,83L,87Q,92P,96L,111P,115L,120G,128D,148V,154K,169F,183G,200S,207S,208G,210S
MN789610	PG16-UG000634	Uganda	2016		genomic RNA		subtype: AD	1	231	6L,14S,15L,27I,41T,83L,91N,120S,148V,154K,180D,199R,225S
MN789078	PG16-UG000639	Uganda	2016		genomic RNA		subtype: A	1	231	6A,11I,14S,15L,27I,30R,31G,54M,58I,71D,83I,87Q,96I,111P,128D,148V,154K,169F,180D,183G,187A,200S,203R,207S,208G
MN789043	PG16-UG000640	Uganda	2016		genomic RNA		subtype: AD	1	231	6A,15V,27I,30R,54M,58I,71D,83L,87P,91H,92P,96I,98D,116A,124V,131R,148V,154K,169F,180D,183G,187D,191I,200S,203R,207A,208G,225S,230I
MN788859	PG16-UG000651	Uganda	2016		genomic RNA		subtype: AD	1	231	6A,11I,14P,15F,16T,27I,29D,31G,54M,58I,71D,83I,92P,111I,120S,128D,148V,154K,169F,178T,187D,207S,208G
MN789250	PG16-UG000655	Uganda	2016		genomic RNA		subtype: AC	1	231	6A,27I,41T,71D,83I,91X,92X,93X,94X,95X,96X,97X,98X,99X,100X,101X,102X,111I,120A,128D,148V,154K,169F,178T,180D,187D,191I,203R,208G,225S
MN788839	PG16-UG000658	Uganda	2016		genomic RNA		subtype: AD	1	231	6A,12Y,15V,27I,30R,54M,58I,71D,83L,87Q,92P,96L,111P,120G,128D,148V,154K,169F,180D,183G,200S,203R,207T,208G
MN788928	PG16-UG000659	Uganda	2016		genomic RNA		subtype: D	1	231	6L,14S,27I,83L,91V,110N,120S,148V,180D,209C,225S
MN789894	PG16-UG000660	Uganda	2016		genomic RNA		subtype: AD	1	231	6A,11T,12Y,15V,26A,27I,29D,36I,54M,58V,71D,78V,83L,92P,111P,120G,128D,148V,154K,169F,171C,180D,203R,207T,208G,225S
MN789562	PG16-UG000661	Uganda	2015		genomic RNA		subtype: AC	1	231	6A,11I,14P,15V,27I,30R,54M,58I,71D,83L,87Q,92P,96L,111T,115L,120S,128D,148V,154K,169F,171A,180D,183G,187D,200G,207T,208G,225S
MN788970	PG16-UG000662	Uganda	2015		genomic RNA		subtype: A	1	231	3I,6A,11M,14N,15L,26A,27I,36I,45D,58I,71D,83L,87Q,92P,96I,111P,116A,120R,128D,148V,153V,154K,169F,171I,178T,183G,200S,203R,207T,208G
MN790002	PG16-UG000664	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,12Y,15F,27I,31G,48A,54M,58I,71D,83L,87Q,92Q,96L,111P,120G,148V,154K,169F,178T,183G,200A,203R,207S,208G,225S
MN789554	PG16-UG000667	Uganda	2015		genomic RNA		subtype: D	1	231	6L,27I,91V,116A,120S,148V,180D,225S
MN789057	PG16-UG000672	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,14N,15L,27I,54M,58I,71D,83L,111P,116A,120G,128D,148V,154K,169F,178T,180D,191I,200S,203R,207A,208G,225S
MN790045	PG16-UG000677	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,11I,13N,14P,27I,50S,54V,58I,71D,83L,91V,111I,120G,128D,148V,154K,169F,171V,174S,178T,183G,203R,207T,208G,225S
MN789195	PG16-UG000678	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,11I,14P,16A,17A,41T,50H,66L,83L,91V,135V,148V,154K,180D,191T,203R,208G,225S
MN789510	PG16-UG000681	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,14T,15M,27I,50S,68L,79D,83T,87Q,96I,116A,120S,128D,148V,180D,208H,210P,225S
MN789725	PG16-UG000684	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,14N,15L,27I,54M,58I,71D,83L,91V,111P,116A,120G,121T,128D,148V,154K,169F,178T,183G,187D,200S,203R,208G
MN789644	PG16-UG000685	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,15V,27I,41T,54M,58I,71D,83L,87P,91V,96L,98D,111P,120G,128D,148V,153V,154K,169F,171I,180D,183G,191I,203R,207T,208G
MN790201	PG16-UG000687	Uganda	2015		genomic RNA		subtype: AG	1	231	6A,11I,12Y,15F,27I,30R,31G,48A,54M,58I,71D,83T,92P,111P,115V,120G,128D,148V,154K,169F,180D,191I,200S,203R,208G,225S
MN790191	PG16-UG000688	Uganda	2015		genomic RNA		subtype: AD	1	231	6M,14S,27I,83L,87Q,112A,120S,124V,148V,180D
MN790186	PG16-UG000689	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11A,12Y,16T,27I,30R,54M,58I,71D,83L,92P,111P,115V,116A,120S,128D,148V,154K,169F,171C,178T,183H,191T,200A,203R,208G,225S
MN790017	PG16-UG000700	Uganda	2015		genomic RNA		subtype: A	1	231	6A,15V,27I,30R,45D,54M,58I,71D,83T,92P,120S,128D,148V,154K,169F,171I,180D,183G,191I,200S,207T,208G,225S
MN789401	PG16-UG000703	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,14T,15M,27I,50S,68L,79D,83T,87Q,96I,116A,120S,128D,148V,180D,208H,210P,225S
MN789159	PG16-UG000706	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,14S,27I,83L,116D,120G,148V,180D,183T,208G
MN789437	PG16-UG000708	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,14G,15L,26A,27I,30R,31G,50G,54M,58I,71D,79D,83L,87Q,92P,96L,111P,120G,148V,154K,169F,178T,183G,191I,200S,203R,207S,208G
MN788915	PG16-UG000714	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,9H,11T,14T,15L,27I,48L,50A,58V,71D,79D,83L,96I,111V,115V,116A,120G,128D,148V,154K,169F,171V,174S,180D,187D,200S,203R,207T,208G,210S
MN788777	PG16-UG000716	Uganda	2015		genomic RNA		subtype: D	1	231	6L,11I,15L,27I,50G,71D,83T,87Q,91P,96L,116A,120H,128D,148V,154K,177G,180D,208G
MN789406	PG16-UG000717	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,12Y,14S,15V,26A,27I,30R,31G,36I,45D,47G,50S,52F,54M,58I,71D,83L,87Q,91V,92P,93Q,96L,120A,148V,154K,169F,170R,178T,200G,207S,208G
MN789342	PG16-UG000719	Uganda	2015		genomic RNA		subtype: AD	1	231	2V,6A,11I,14P,15L,26A,27I,30R,31G,36I,50G,54M,58I,71D,79D,83L,92P,110N,128D,148V,154K,169F,178T,183G,200A,203R,207S,208G,210S
MN789410	PG16-UG000722	Burundi	2015		genomic RNA		subtype: D	1	231	6L,14S,15L,27I,83L,96I,116A,148V,180D
MN788968	PG16-UG000723	Uganda	2015		genomic RNA		subtype: A	1	231	6A,14P,15L,27I,30R,48S,50H,54M,58I,71D,83L,87Q,92P,96I,111P,115V,116V,120R,128D,148V,154K,160S,169F,171I,177G,187D,191I,200S,201L,208G,225S
MN789177	PG16-UG000726	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,12Y,15L,27I,30R,31G,48A,54M,58I,71D,92P,111P,128D,148V,154K,169F,178T,183G,187D,200S,203R,207S,208G
MN789355	PG16-UG000727	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11M,15L,26A,27I,30R,31G,54M,58I,71D,79D,83L,92P,111I,120S,128D,148V,154K,169F,171V,178T,183G,200S,203R,207S,208G,210S
MN789565	PG16-UG000731	Rwanda	2015		genomic RNA		subtype: A	1	231	6A,11I,15L,27I,30R,31G,54M,58I,71D,83I,87Q,92P,96L,111I,115V,120G,128D,148V,154K,169F,179S,180D,200S,207Q,208G
MN788869	PG16-UG000732	Uganda	2015		genomic RNA		subtype: AC	1	231	6L,27I,36I,41T,71D,83L,87P,91V,116A,120S,128D,148V,169F,180D,187D,203R,208G,225S
MN790156	PG16-UG000733	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,14P,15L,27I,29D,31G,33N,54M,58I,71D,83L,87Q,92P,96I,111P,116I,120S,128D,148V,154K,169F,178T,183G,200S,203R,207T,208G,225S
MN789907	PG16-UG000734	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,14S,27I,91A,120S,148V,160S,180D,183T
MN789660	PG16-UG000735	Uganda	2015		genomic RNA		subtype: AD	1	231	6L,15L,27I,33N,36I,83L,87Q,91V,96L,110N,116A,120H,128D,148V,180D,208G,225S
MN788910	PG16-UG000738	Uganda	2015		genomic RNA		subtype: A	1	231	6A,15M,27I,83L,91V,111V,112P,116A,120G,124V,131R,148V,154K,169F,178T,180D,203R,207T,208G
MN790110	PG16-UG000741	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,14P,15L,31G,54M,58I,71D,83L,86A,92P,110N,111T,120S,128D,148V,169F,178T,180D,187D,200S,203R,208G
MN789441	PG16-UG000742	Uganda	2015		genomic RNA		subtype: ACD	1	231	6L,27I,83L,87P,96I,98D,116T,148V,180D,208Q,225S
MN789146	PG16-UG000743	Tanzania	2015		genomic RNA		subtype: AC	1	231	6A,11I,14P,15L,31G,54M,58I,71D,83L,86A,91X,92X,93X,94X,95X,96X,97X,98X,99X,100X,101X,102CGRS,111V,120S,124V,148V,154K,169F,178T,180D,187D,203R,204G,207A,208G
MN789647	PG16-UG000760	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,14S,15L,27I,54M,58I,71D,83L,91V,111P,116A,120G,128D,148V,153V,154K,169F,171I,178T,180D,191I,203R,204G,207S,208G,210S
MN788887	PG16-UG000770	Uganda	2015		genomic RNA		subtype: A	1	231	6A,12Y,13N,14P,15ILV,27I,40FL,41X,42X,43X,44X,45X,46X,47X,48X,49X,50X,51X,52X,53X,54X,55X,56X,57X,58X,59X,60X,61X,62X,63X,64X,65X,66X,67X,68X,69X,70X,71X,72X,73X,74X,75X,76X,77X,78X,79X,80X,81X,82X,83X,84X,85X,86X,87X,88X,89X,90X,91X,92X,93X,94X,95X,96X,97X,98X,99X,100X,101X,102CGRS,111T,120G,128D,148V,154K,169F,178T,183G,200S,203R,208G,210S,225S,230I
MN789354	PG16-UG000772	Uganda	2015		genomic RNA		subtype: A	1	231	6A,11I,14N,15L,27I,50G,58I,71D,92P,111P,115V,116A,120G,128D,131R,148V,169F,171V,178T,180D,203R,204S,207T,208G
MN789599	PG16-UG000776	Uganda	2015		genomic RNA		subtype: AD	1	231	6A,11M,15V,26A,27I,30R,31G,50G,54M,58I,59I,71D,83L,92P,111T,120S,128D,148V,154K,169F,171V,178T,183G,200S,203R,207S,208G,210S,225S
MN788847	PG16-UG000778	Uganda	2015		genomic RNA		subtype: A	1	231	6A,12Y,13N,15L,27I,48I,54M,58V,71D,83L,87Q,92P,107S,111V,120S,124V,128D,131R,148V,154K,169F,171A,178T,180D,191I,200S,207V,208G,225S
MN790082	PG16-UG000783	Uganda	2015		genomic RNA		subtype: A	1	231	6A,10L,14V,15L,27I,31G,33N,36I,45D,58I,71D,83L,87Q,91V,111P,120S,128D,148V,154K,163E,169F,177C,178T,183G,187D,191I,200S,203R,207S,208G,225S
MN788755	PG16-UG000789	Uganda	2016		genomic RNA		subtype: A	1	231	6A,11I,14P,15L,27I,31G,33N,54M,58I,71D,83I,91P,111P,116A,120G,123A,128D,148V,154K,169F,171C,178T,183G,200S,203R,207T,208G,210S
MN789188	PG16-UG000790	Uganda	2016		genomic RNA		subtype: AC	1	231	6A,11A,12Y,15V,27I,54M,58I,71D,83L,91V,111T,116A,120G,128D,148V,154K,160S,169F,171A,178T,183G,187D,200S,207T,208G,225S
MN789563	PG16-UG000794	Uganda	2016		genomic RNA		subtype: A	1	231	6A,11I,14S,15L,27I,54M,58I,71D,83L,87Q,91V,96I,111I,116A,120R,124V,128D,148V,154K,169F,171V,178T,183G,200S,203R,207T,208G,225S
MN789717	PG16-UG000797	Uganda	2016		genomic RNA		subtype: A	1	231	6A,14S,15L,26I,27I,48I,54M,58I,71D,83T,92P,111P,120G,128D,148V,169F,178T,180D,200S,207T,208G,225S
MN789989	PG16-UG000806	Uganda	2016		genomic RNA		subtype: ACD	1	231	6A,11I,14P,15L,27I,41I,83L,91V,110N,113D,120S,148V,154K,160T,171V,180D,207S,208G
MN789464	PG16-UG000810	Uganda	2016		genomic RNA		subtype: AD	1	231	6A,11M,14P,15L,27I,30R,31G,54M,58I,71D,83L,87Q,92P,110N,111T,120G,128D,148V,152N,154K,169F,178T,183G,187D,203R,207S,208G,210S
MN789982	PG16-UG000811	Uganda	2016		genomic RNA		subtype: AD	1	231	6L,15L,27I,83L,96L,116A,120H,148V
MN789767	PG16-UG000812	Uganda	2016		genomic RNA		subtype: A	1	231	6A,11I,12Y,15V,31G,33N,54M,58I,71D,83L,111P,116A,120G,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G,225S
MN790130	PG16-UG000817	Uganda	2016		genomic RNA		subtype: A	1	231	6A,15V,27I,30R,45D,54M,58I,75D,83L,111I,116A,120G,128D,148V,154K,169F,171A,180D,183G,200S,203R,204G,207A,208G
MN789808	PG16-UG000820	Uganda	2016		genomic RNA		subtype: A	1	231	6A,11I,12N,14P,15L,27I,30R,31G,50G,54M,58V,59I,71D,79D,83I,87Q,92P,96I,110N,111T,116A,128D,148V,154K,169F,178T,183G,200S,207S,208G,210S,225S
MN790077	PG16-UG000821	Uganda	2016		genomic RNA		subtype: AD	1	231	6A,11T,27I,41T,50G,54M,58I,71D,83L,100T,111P,116A,120G,128D,148V,154K,169F,171A,178T,180D,187D,191T,200A,203R,207S,208G,225S
MN790185	PG16-UG000823	Uganda	2016		genomic RNA		subtype: A	1	231	6L,27I,41T,83I,120S,148V,178T,199R
MN789585	PG16-UG000825	Uganda	2016		genomic RNA		subtype: AD	1	231	6A,11I,14T,15L,27I,54M,58I,71D,91V,92P,111P,120S,128D,148V,153V,154K,169F,171I,178T,183G,200S,203R,207T,208G
MN788946	PG16-UG000830	Uganda	2016		genomic RNA		subtype: AD	1	231	6A,11T,15L,27I,41T,50G,54M,58I,71D,83I,111P,116A,120G,128D,148V,154K,169F,178T,187D,191I,200A,203R,208G,225S
MN788854	PG16-UG000834	Uganda	2016		genomic RNA		subtype: A	1	231	6A,11T,15L,27I,33N,54M,58V,71D,83L,92V,111V,120G,124V,128D,131R,148V,154K,163E,169F,178T,200S,203R,207S,208G,225S
MN788805	PG16-UG000836	Uganda	2016		genomic RNA		subtype: AD	1	231	6A,11T,14S,15L,27I,41T,50G,54M,58I,71D,83L,111P,116A,120G,128D,148V,154K,169F,178T,180D,187D,191T,200A,203R,207Q,208G
MN789903	PG16-UG000839	Uganda	2016		genomic RNA		subtype: CD	1	231	6H,27I,41T,71D,116A,120S,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MN789123	PG16-UG000841	Uganda	2016		genomic RNA		subtype: D	1	231	6L,16T,27I,50A,68I,83L,91F,120S,128D,148V,154K,171C,180D,208Q,225S
MN789377	PG16-UG000845	Uganda	2016		genomic RNA		subtype: A	1	231	6A,11I,14P,15L,27I,30R,31G,54M,58I,71D,79D,83L,92P,110N,111T,120G,148V,154K,169F,180D,200S,203R,208G,210S,225S
MN788853	PG16-UG000846	Uganda	2016		genomic RNA		subtype: AD	1	231	6L,14N,15L,27I,41T,50H,83L,87Q,91V,110N,120S,124V,148V,180D,199R,208G,210S
MN789228	PG16-UG000856	Uganda	2013		genomic RNA		subtype: A	1	231	6A,15L,27I,30R,31G,54M,58I,71D,83I,92P,111I,120G,128D,148V,154K,169F,178T,183G,200S,203R,207S,208G
MN789626	PG16-UG000857	Uganda	2013		genomic RNA		subtype: A	1	231	6A,15V,27I,31G,41T,58I,71D,83L,87Q,96L,111I,115V,120G,128D,148V,154K,169F,178T,187D,200S,203R,208G
MN790112	PG16-UG000858	Uganda	2016		genomic RNA		subtype: AD	1	231	6A,11I,14P,15L,26A,27I,29D,52I,54M,58V,71D,83L,91M,111P,116A,120G,128D,148V,154K,169F,171V,178T,183G,200S,203R,207T,208G,225S