Genbank References: capsid (p24)

Authors	Title	Citation	E-value	# in Gb	#Pts	ART	Source	Cloning	StudyType
Fisher (2024)	Emergence of genetically distinct HIV-1 populations is associated with transient virological control during analytical interruption of antiretroviral therapy	Unpublished	2.43e-167	395

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Accession	IsolateName	Country	Coll Date	Clone	MolType	Source	Note	FirstAA	LastAA	MutList
OR876498	P2_PBMC_OnARTWk48_003		2001		genomic DNA		Intact;subtype: B,C	1	231	6M,208G
OR876497	P2_PBMC_OnARTWk48_012		2001		genomic DNA		Intact;subtype: B	1	231	6M,208G
OR876496	P2_PBMC_OnARTWk48_013		2001		genomic DNA		Intact;subtype: B	1	231	6M,208G
OR876495	P2_PBMC_OnARTWk48_017		2001		genomic DNA		Intact;subtype: B	1	231	6M,208G,225S,230I
OR876494	P2_PBMC_OnARTWk48_040		2001		genomic DNA		Intact;subtype: B	1	231	6M,208G
OR876493	P2_PBMC_OnARTWk48_048		2001		genomic DNA		Intact;subtype: B	1	231	6M,208G,225S,230I
OR876431	P2_R1Wk4_GAG_01		2001		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876430	P2_R1Wk4_GAG_02		2001		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876429	P2_R1Wk4_GAG_03		2001		genomic RNA		Intact;subtype: B	1	231	6M,208G,225S,230I
OR876428	P2_R1Wk4_GAG_04		2001		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876427	P2_R1Wk4_GAG_05		2001		genomic RNA		Intact;subtype: B,C	1	231	6M,208G
OR876426	P2_R1Wk4_GAG_07		2001		genomic RNA		Defective;subtype: B	1	231	6M,208G
OR876425	P2_R1Wk4_GAG_08		2001		genomic RNA		Defective;subtype: B,F2	1	231	6M,208G
OR876424	P2_R1Wk4_GAG_09		2001		genomic RNA		Intact;subtype: B	1	231	6M,208G,225S,230I
OR876423	P2_R1Wk4_GAG_10		2001		genomic RNA		Intact;subtype: B	1	231	6M,208G,225S,230I
OR876422	P2_R1Wk4_GAG_11		2001		genomic RNA		Defective;subtype: B	1	231	6M,208G,225S,230I
OR876421	P2_R1Wk4_GAG_12		2001		genomic RNA		Intact;subtype: B	1	231	6M,208G,225S,230I
OR876420	P2_R1Wk4_GAG_13		2001		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876419	P2_R1Wk4_GAG_14		2001		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876418	P2_R1Wk4_GAG_15		2001		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876417	P2_R1Wk4_GAG_17		2001		genomic RNA		Intact;subtype: B	1	231	6M,208G,225S,230I
OR876416	P2_R1Wk4_GAG_18		2001		genomic RNA		Intact;subtype: B	1	231	6M,208G,225S,230I
OR876415	P2_R1Wk4_GAG_19		2001		genomic RNA		Defective;subtype: B	1	231	6M,208G
OR876414	P2_R1Wk4_GAG_21		2001		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876413	P2_R1Wk4_GAG_22		2001		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876412	P2_R1Wk4_GAG_23		2001		genomic RNA		Intact;subtype: B	1	231	6M,208G,225S,230I
OR876411	P2_R1Wk4_GAG_24		2001		genomic RNA		Defective;subtype: B	1	231	6M,208G
OR876410	P2_R1Wk4_GAG_25		2001		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876409	P2_R1Wk4_GAG_26		2001		genomic RNA		Defective;subtype: B	1	231	6M,208G
OR876408	P2_R1Wk4_GAG_28		2001		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876407	P2_R1Wk4_GAG_29		2001		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876406	P2_R1Wk4_GAG_30		2001		genomic RNA		Intact;subtype: B,C	1	231	6M,208G
OR876405	P2_R1Wk4_GAG_31		2001		genomic RNA		Defective;subtype: B	1	231	6M,208G,225S,230I
OR876404	P2_R1Wk4_GAG_32		2001		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876403	P2_R1Wk4_GAG_33		2001		genomic RNA		Intact;subtype: B	1	231	6M,208G,225S,230I
OR876402	P2_R1Wk4_GAG_34		2001		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876401	P2_R1Wk4_GAG_35		2001		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876463	P2_R2Wk4_GAG_01		2002		genomic RNA		Defective;subtype: B	1	231	6M,208G
OR876462	P2_R2Wk4_GAG_02		2002		genomic RNA		Defective;subtype: B,C	1	231	6M,208G
OR876461	P2_R2Wk4_GAG_03		2002		genomic RNA		Defective;subtype: B,C	1	231	6M,208G
OR876460	P2_R2Wk4_GAG_04		2002		genomic RNA		Defective;subtype: B	1	231	6M,208G
OR876459	P2_R2Wk4_GAG_05		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876458	P2_R2Wk4_GAG_06		2002		genomic RNA		Intact;subtype: B,C	1	231	6M,208G
OR876457	P2_R2Wk4_GAG_07		2002		genomic RNA		Defective;subtype: B	1	231	6M,208G
OR876456	P2_R2Wk4_GAG_08		2002		genomic RNA		Intact;subtype: B,C	1	231	6M,208G
OR876455	P2_R2Wk4_GAG_09		2002		genomic RNA		Defective;subtype: B,F2	1	231	6M,208G
OR876454	P2_R2Wk4_GAG_10		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G,225S,230I
OR876453	P2_R2Wk4_GAG_11		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876452	P2_R2Wk4_GAG_12		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G,225S,230I
OR876451	P2_R2Wk4_GAG_13		2002		genomic RNA		Intact;subtype: B,C	1	231	6M,208G
OR876450	P2_R2Wk4_GAG_14		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876449	P2_R2Wk4_GAG_15		2002		genomic RNA		Intact;subtype: B,C	1	231	6M,208G
OR876448	P2_R2Wk4_GAG_16		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876447	P2_R2Wk4_GAG_17		2002		genomic RNA		Intact;subtype: B,C	1	231	6M,208G
OR876446	P2_R2Wk4_GAG_18		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G,225S,230I
OR876445	P2_R2Wk4_GAG_20		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876444	P2_R2Wk4_GAG_21		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876443	P2_R2Wk4_GAG_22		2002		genomic RNA		Defective;subtype: B,F2	1	231	6M,208G
OR876442	P2_R2Wk4_GAG_23		2002		genomic RNA		Defective;subtype: B	1	231	6M,208G
OR876440	P2_R2Wk4_GAG_25		2002		genomic RNA		Intact;subtype: B,C	1	231	6M,208G
OR876439	P2_R2Wk4_GAG_28		2002		genomic RNA		Intact;subtype: B,C	1	231	6M,208G
OR876438	P2_R2Wk4_GAG_29		2002		genomic RNA		Defective;subtype: B,C	1	231	6M,208G
OR876437	P2_R2Wk4_GAG_30		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876436	P2_R2Wk4_GAG_31		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876435	P2_R2Wk4_GAG_32		2002		genomic RNA		Intact;subtype: B,C	1	231	6M,208G
OR876434	P2_R2Wk4_GAG_33		2002		genomic RNA		Defective;subtype: B	1	207	6M
OR876433	P2_R2Wk4_GAG_34		2002		genomic RNA		Defective;subtype: B,C	1	231	6M,208G
OR876432	P2_R2Wk4_GAG_35		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G,225S,230I
OR876492	P2_R3Wk4_GAG_01		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876491	P2_R3Wk4_GAG_02		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876490	P2_R3Wk4_GAG_03		2002		genomic RNA		Defective;subtype: B	1	231	6M,208G
OR876489	P2_R3Wk4_GAG_06		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876488	P2_R3Wk4_GAG_07		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876487	P2_R3Wk4_GAG_08		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876486	P2_R3Wk4_GAG_09		2002		genomic RNA		Defective;subtype: B	1	231	6M,208G
OR876485	P2_R3Wk4_GAG_10		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876484	P2_R3Wk4_GAG_11		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G,225S,230I
OR876483	P2_R3Wk4_GAG_12		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876482	P2_R3Wk4_GAG_13		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G,225S,230I
OR876481	P2_R3Wk4_GAG_14		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876480	P2_R3Wk4_GAG_15		2002		genomic RNA		Intact;subtype: B,C	1	231	6M,208G
OR876479	P2_R3Wk4_GAG_16		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876478	P2_R3Wk4_GAG_18		2002		genomic RNA		Intact;subtype: B,C	1	231	6M,208G,225S,230I
OR876477	P2_R3Wk4_GAG_20		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876476	P2_R3Wk4_GAG_21		2002		genomic RNA		Defective;subtype: B	1	231	6M,208G
OR876475	P2_R3Wk4_GAG_22		2002		genomic RNA		Intact;subtype: B,C	1	231	6M,208G
OR876474	P2_R3Wk4_GAG_23		2002		genomic RNA		Intact;subtype: B,C	1	231	6M,208G
OR876473	P2_R3Wk4_GAG_24		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G,225S,230I
OR876472	P2_R3Wk4_GAG_25		2002		genomic RNA		Intact;subtype: B,C	1	231	6M,208G
OR876471	P2_R3Wk4_GAG_26		2002		genomic RNA		Defective;subtype: B	1	231	6M,208G,225S,230I
OR876470	P2_R3Wk4_GAG_27		2002		genomic RNA		Defective;subtype: B,D	1	231	6M,208G
OR876469	P2_R3Wk4_GAG_28		2002		genomic RNA		Defective;subtype: B	1	231	6M,208G
OR876466	P2_R3Wk4_GAG_32		2002		genomic RNA		Intact;subtype: B,C	1	231	6M,208G,225S,230I
OR876465	P2_R3Wk4_GAG_34		2002		genomic RNA		Intact;subtype: B,C	1	231	6M,208G
OR876464	P2_R3Wk4_GAG_35		2002		genomic RNA		Intact;subtype: B	1	231	6M,208G
OR876508	P3_OnARTWk52_PBMC_04		2001		genomic DNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876507	P3_OnARTWk52_PBMC_05		2001		genomic DNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876506	P3_OnARTWk52_PBMC_07		2001		genomic DNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876505	P3_OnARTWk52_PBMC_08		2001		genomic DNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876504	P3_OnARTWk52_PBMC_26		2001		genomic DNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876503	P3_OnARTWk52_PBMC_29		2001		genomic DNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876502	P3_OnARTWk52_PBMC_34		2001		genomic DNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876501	P3_OnARTWk52_PBMC_43		2001		genomic DNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876500	P3_OnARTWk52_PBMC_49		2001		genomic DNA		Intact;subtype: B	1	231	15M,20F,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876499	P3_OnARTWk52_PBMC_59		2001		genomic DNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876809	P3_R1Wk3_GAG_01		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876810	P3_R1Wk3_GAG_02		2001		genomic RNA		Defective;subtype: A1,B,D,H,K	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876812	P3_R1Wk3_GAG_04		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876813	P3_R1Wk3_GAG_05		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876814	P3_R1Wk3_GAG_06		2001		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876815	P3_R1Wk3_GAG_07		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876816	P3_R1Wk3_GAG_08		2001		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876817	P3_R1Wk3_GAG_09		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876818	P3_R1Wk3_GAG_10		2001		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876819	P3_R1Wk3_GAG_11		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876820	P3_R1Wk3_GAG_12		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876821	P3_R1Wk3_GAG_13		2001		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876822	P3_R1Wk3_GAG_14		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876823	P3_R1Wk3_GAG_16		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876824	P3_R1Wk3_GAG_17		2001		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876825	P3_R1Wk3_GAG_18		2001		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876826	P3_R1Wk3_GAG_19		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876828	P3_R1Wk3_GAG_21		2001		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876829	P3_R1Wk3_GAG_22		2001		genomic RNA		Defective;subtype: A1,B,C,D	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876830	P3_R1Wk3_GAG_23		2001		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876831	P3_R1Wk3_GAG_24		2001		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876832	P3_R1Wk3_GAG_25		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876833	P3_R1Wk3_GAG_26		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876834	P3_R1Wk3_GAG_27		2001		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876835	P3_R1Wk3_GAG_28		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876836	P3_R1Wk3_GAG_29		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876837	P3_R1Wk3_GAG_31		2001		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876838	P3_R1Wk3_GAG_32		2001		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876839	P3_R1Wk3_GAG_33		2001		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876840	P3_R1Wk3_GAG_34		2001		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876841	P3_R1Wk3_GAG_35		2001		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876741	P3_R2Wk1_GAG_01		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876742	P3_R2Wk1_GAG_02		2001		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876743	P3_R2Wk1_GAG_03		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876744	P3_R2Wk1_GAG_04		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876746	P3_R2Wk1_GAG_07		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876747	P3_R2Wk1_GAG_08		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876748	P3_R2Wk1_GAG_09		2001		genomic RNA		Defective;subtype: B,C	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876749	P3_R2Wk1_GAG_10		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876750	P3_R2Wk1_GAG_11		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876751	P3_R2Wk1_GAG_12		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876752	P3_R2Wk1_GAG_13		2001		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876753	P3_R2Wk1_GAG_14		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876754	P3_R2Wk1_GAG_15		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876755	P3_R2Wk1_GAG_16		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876756	P3_R2Wk1_GAG_18		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876757	P3_R2Wk1_GAG_19		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876758	P3_R2Wk1_GAG_20		2001		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876759	P3_R2Wk1_GAG_21		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876760	P3_R2Wk1_GAG_22		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876761	P3_R2Wk1_GAG_23		2001		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876762	P3_R2Wk1_GAG_25		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876763	P3_R2Wk1_GAG_27		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876764	P3_R2Wk1_GAG_28		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876765	P3_R2Wk1_GAG_29		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876766	P3_R2Wk1_GAG_30		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876767	P3_R2Wk1_GAG_31		2001		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876768	P3_R2Wk1_GAG_32		2001		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876769	P3_R2Wk1_GAG_33		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876770	P3_R2Wk1_GAG_35		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876771	P3_R2Wk1_GAG_36		2001		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876772	P3_R2Wk1_GAG_38		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876773	P3_R2Wk1_GAG_39		2001		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D,190M
OR876774	P3_R3Wk1_GAG_01		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876775	P3_R3Wk1_GAG_02		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876776	P3_R3Wk1_GAG_03		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876777	P3_R3Wk1_GAG_04		2002		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876778	P3_R3Wk1_GAG_06		2002		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876779	P3_R3Wk1_GAG_07		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876781	P3_R3Wk1_GAG_09		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876782	P3_R3Wk1_GAG_10		2002		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876783	P3_R3Wk1_GAG_11		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876784	P3_R3Wk1_GAG_12		2002		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876785	P3_R3Wk1_GAG_13		2002		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876786	P3_R3Wk1_GAG_16		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876787	P3_R3Wk1_GAG_17		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876788	P3_R3Wk1_GAG_18		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876789	P3_R3Wk1_GAG_19		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876790	P3_R3Wk1_GAG_20		2002		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876791	P3_R3Wk1_GAG_21		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876792	P3_R3Wk1_GAG_22		2002		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876793	P3_R3Wk1_GAG_23		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,159K,180D
OR876794	P3_R3Wk1_GAG_24		2002		genomic RNA		Defective;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876795	P3_R3Wk1_GAG_25		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876796	P3_R3Wk1_GAG_26		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876797	P3_R3Wk1_GAG_27		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876798	P3_R3Wk1_GAG_28		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876799	P3_R3Wk1_GAG_29		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876800	P3_R3Wk1_GAG_30		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876802	P3_R3Wk1_GAG_32		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876803	P3_R3Wk1_GAG_33		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876804	P3_R3Wk1_GAG_34		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876805	P3_R3Wk1_GAG_36		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876806	P3_R3Wk1_GAG_38		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876807	P3_R3Wk1_GAG_39		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876808	P3_R3Wk1_GAG_40		2002		genomic RNA		Intact;subtype: B	1	231	15M,44A,68I,78T,83L,87Q,91V,96I,110N,116A,120H,180D
OR876516	P3_SCR_PBMC_49		2000		genomic DNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876515	P3_SCR_PBMC_50		2000		genomic DNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876514	P3_SCR_PBMC_52		2000		genomic DNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876513	P3_SCR_PBMC_54		2000		genomic DNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876512	P3_SCR_PBMC_56		2000		genomic DNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876511	P3_SCR_PBMC_57		2000		genomic DNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876510	P3_SCR_PBMC_61		2000		genomic DNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876509	P3_SCR_PBMC_62		2000		genomic DNA		Intact;subtype: B	1	231	15M,44A,68I,83L,87Q,91V,96I,110N,116A,120H,180D
OR876626	P4_BSL_PBMC_49		2001		genomic DNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G,212K
OR876625	P4_BSL_PBMC_50		2001		genomic DNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876624	P4_BSL_PBMC_51		2001		genomic DNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876623	P4_BSL_PBMC_53		2001		genomic DNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876622	P4_BSL_PBMC_54		2001		genomic DNA		Intact;subtype: B	1	231	6M,14P,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876621	P4_BSL_PBMC_56		2001		genomic DNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876620	P4_BSL_PBMC_57		2001		genomic DNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876619	P4_BSL_PBMC_58		2001		genomic DNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876618	P4_BSL_PBMC_61		2001		genomic DNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876617	P4_BSL_PBMC_62		2001		genomic DNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876616	P4_BSL_PBMC_65		2001		genomic DNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876615	P4_BSL_PBMC_67		2001		genomic DNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876614	P4_BSL_PBMC_69		2001		genomic DNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876613	P4_BSL_PBMC_72		2001		genomic DNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876612	P4_BSL_PBMC_76		2001		genomic DNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876611	P4_OnARTWk52_PBMC_12		2002		genomic DNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876610	P4_OnARTWk52_PBMC_18		2002		genomic DNA		Intact;subtype: B	1	231	6M,14P,15M,27I,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876609	P4_OnARTWk52_PBMC_22		2002		genomic DNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876608	P4_OnARTWk52_PBMC_23		2002		genomic DNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876607	P4_OnARTWk52_PBMC_46		2002		genomic DNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876606	P4_OnARTWk52_PBMC_50		2002		genomic DNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876605	P4_OnARTWk52_PBMC_58		2002		genomic DNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876604	P4_OnARTWk52_PBMC_60		2002		genomic DNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876548	P4_R1Wk4_GAG_01		2002		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876547	P4_R1Wk4_GAG_02		2002		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876546	P4_R1Wk4_GAG_03		2002		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876545	P4_R1Wk4_GAG_04		2002		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876544	P4_R1Wk4_GAG_05		2002		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876543	P4_R1Wk4_GAG_06		2002		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876542	P4_R1Wk4_GAG_07		2002		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876541	P4_R1Wk4_GAG_08		2002		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876540	P4_R1Wk4_GAG_09		2002		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876539	P4_R1Wk4_GAG_11		2002		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876538	P4_R1Wk4_GAG_12		2002		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876537	P4_R1Wk4_GAG_13		2002		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876536	P4_R1Wk4_GAG_14		2002		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876535	P4_R1Wk4_GAG_15		2002		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876534	P4_R1Wk4_GAG_16		2002		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876533	P4_R1Wk4_GAG_17		2002		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876532	P4_R1Wk4_GAG_18		2002		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876531	P4_R1Wk4_GAG_19		2002		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876530	P4_R1Wk4_GAG_20		2002		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876529	P4_R1Wk4_GAG_21		2002		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876528	P4_R1Wk4_GAG_22		2002		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876527	P4_R1Wk4_GAG_23		2002		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876526	P4_R1Wk4_GAG_24		2002		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876525	P4_R1Wk4_GAG_25		2002		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876524	P4_R1Wk4_GAG_26		2002		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876523	P4_R1Wk4_GAG_27		2002		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876522	P4_R1Wk4_GAG_28		2002		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876521	P4_R1Wk4_GAG_29		2002		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,141T,208G
OR876520	P4_R1Wk4_GAG_30		2002		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876519	P4_R1Wk4_GAG_31		2002		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876518	P4_R1Wk4_GAG_32		2002		genomic RNA		Defective;subtype: A1,B,C,D,F1,F2,H,J	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876517	P4_R1Wk4_GAG_33		2002		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876603	P4_R2Wk16_GAG_01		2003		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876602	P4_R2Wk16_GAG_02		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876601	P4_R2Wk16_GAG_03		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876600	P4_R2Wk16_GAG_05		2003		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876599	P4_R2Wk16_GAG_06		2003		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876598	P4_R2Wk16_GAG_07		2003		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876597	P4_R2Wk16_GAG_08		2003		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876595	P4_R2Wk16_GAG_10		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876594	P4_R2Wk16_GAG_11		2003		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876593	P4_R2Wk16_GAG_13		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876592	P4_R2Wk16_GAG_14		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876591	P4_R2Wk16_GAG_15		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876590	P4_R2Wk16_GAG_16		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876589	P4_R2Wk16_GAG_17		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876588	P4_R2Wk16_GAG_18		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876587	P4_R2Wk16_GAG_19		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876586	P4_R2Wk16_GAG_20		2003		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876585	P4_R2Wk16_GAG_22		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876584	P4_R2Wk16_GAG_23		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876583	P4_R2Wk16_GAG_24		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876582	P4_R3Wk4_GAG_01		2003		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876581	P4_R3Wk4_GAG_02		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,56P,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876580	P4_R3Wk4_GAG_03		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91A,96I,110N,116A,120H,136M,208G
OR876579	P4_R3Wk4_GAG_04		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876578	P4_R3Wk4_GAG_05		2003		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876577	P4_R3Wk4_GAG_06		2003		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876576	P4_R3Wk4_GAG_07		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876575	P4_R3Wk4_GAG_09		2003		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876574	P4_R3Wk4_GAG_10		2003		genomic RNA		Defective;subtype: B,F1	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876573	P4_R3Wk4_GAG_11		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876572	P4_R3Wk4_GAG_12		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876571	P4_R3Wk4_GAG_13		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876570	P4_R3Wk4_GAG_14		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876569	P4_R3Wk4_GAG_15		2003		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876568	P4_R3Wk4_GAG_16		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91A,96I,110N,116A,120H,136M,208G
OR876567	P4_R3Wk4_GAG_17		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876566	P4_R3Wk4_GAG_18		2003		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876565	P4_R3Wk4_GAG_19		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,24I,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876564	P4_R3Wk4_GAG_20		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91A,96I,110N,116A,120H,136M,208G
OR876563	P4_R3Wk4_GAG_21		2003		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876562	P4_R3Wk4_GAG_22		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876561	P4_R3Wk4_GAG_23		2003		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876560	P4_R3Wk4_GAG_24		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876559	P4_R3Wk4_GAG_25		2003		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876558	P4_R3Wk4_GAG_26		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876557	P4_R3Wk4_GAG_27		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876556	P4_R3Wk4_GAG_28		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876555	P4_R3Wk4_GAG_29		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876554	P4_R3Wk4_GAG_30		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876553	P4_R3Wk4_GAG_31		2003		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,154K,160S,208G
OR876552	P4_R3Wk4_GAG_32		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,27I,44A,83L,87Q,91V,96I,110N,116A,120H,136M,208G
OR876551	P4_R3Wk4_GAG_33		2003		genomic RNA		Defective;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876550	P4_R3Wk4_GAG_34		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876549	P4_R3Wk4_GAG_35		2003		genomic RNA		Intact;subtype: B	1	231	6M,14P,15M,44A,83L,86A,87Q,91V,96I,110N,116A,120H,136M,208G
OR876723	P5_OnARTWk52_PBMC_18		2001		genomic DNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876722	P5_OnARTWk52_PBMC_19		2001		genomic DNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876721	P5_OnARTWk52_PBMC_30		2001		genomic DNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876720	P5_OnARTWk52_PBMC_42		2001		genomic DNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876690	P5_R1Wk3_GAG_01		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876689	P5_R1Wk3_GAG_02		2001		genomic RNA		Defective;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876688	P5_R1Wk3_GAG_03		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876687	P5_R1Wk3_GAG_04		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876686	P5_R1Wk3_GAG_05		2001		genomic RNA		Defective;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876685	P5_R1Wk3_GAG_06		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876684	P5_R1Wk3_GAG_07		2001		genomic RNA		Defective;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876683	P5_R1Wk3_GAG_08		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876682	P5_R1Wk3_GAG_09		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876681	P5_R1Wk3_GAG_10		2001		genomic RNA		Defective;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876680	P5_R1Wk3_GAG_11		2001		genomic RNA		Defective;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876679	P5_R1Wk3_GAG_12		2001		genomic RNA		Defective;subtype: A1,B,C,F2,G,K	1	231	6L,11L,71D,83L,154K,170R,180D
OR876677	P5_R1Wk3_GAG_14		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876676	P5_R1Wk3_GAG_15		2001		genomic RNA		Defective;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876675	P5_R1Wk3_GAG_16		2001		genomic RNA		Defective;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876673	P5_R1Wk3_GAG_18		2001		genomic RNA		Intact;subtype: B	1	231	3M,6L,71D,83L,154K,170R,180D
OR876672	P5_R1Wk3_GAG_19		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876671	P5_R1Wk3_GAG_20		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876670	P5_R1Wk3_GAG_21		2001		genomic RNA		Defective;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876669	P5_R1Wk3_GAG_22		2001		genomic RNA		Defective;subtype: 01_AE,A1,B,F1,G,K	1	231	6L,71D,83L,154K,170R,180D
OR876666	P5_R1Wk3_GAG_25		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876665	P5_R1Wk3_GAG_26		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876664	P5_R1Wk3_GAG_27		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876663	P5_R1Wk3_GAG_29		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876662	P5_R1Wk3_GAG_30		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876661	P5_R1Wk3_GAG_31		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,170R,180D
OR876660	P5_R1Wk3_GAG_32		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876659	P5_R1Wk3_GAG_33		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876658	P5_R1Wk3_GAG_34		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876719	P5_R2Wk4_GAG_01		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876718	P5_R2Wk4_GAG_03		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876716	P5_R2Wk4_GAG_06		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876715	P5_R2Wk4_GAG_07		2001		genomic RNA		Defective;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876714	P5_R2Wk4_GAG_09		2001		genomic RNA		Defective;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876713	P5_R2Wk4_GAG_10		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876712	P5_R2Wk4_GAG_11		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876711	P5_R2Wk4_GAG_12		2001		genomic RNA		Defective;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876710	P5_R2Wk4_GAG_13		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876709	P5_R2Wk4_GAG_14		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876708	P5_R2Wk4_GAG_15		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876707	P5_R2Wk4_GAG_16		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876706	P5_R2Wk4_GAG_18		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876705	P5_R2Wk4_GAG_19		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876704	P5_R2Wk4_GAG_20		2001		genomic RNA		Defective;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876703	P5_R2Wk4_GAG_21		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876702	P5_R2Wk4_GAG_22		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876701	P5_R2Wk4_GAG_23		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876700	P5_R2Wk4_GAG_24		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876698	P5_R2Wk4_GAG_26		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876697	P5_R2Wk4_GAG_27		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876696	P5_R2Wk4_GAG_28		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876695	P5_R2Wk4_GAG_29		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876694	P5_R2Wk4_GAG_30		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876693	P5_R2Wk4_GAG_31		2001		genomic RNA		Defective;subtype: A2,01_AE,A1,B,C,D,F1,H,J,K	1	231	6L,71D,83L,154K,170R,180D
OR876692	P5_R2Wk4_GAG_32		2001		genomic RNA		Defective;subtype: B,C	1	231	6L,71D,79K,83L,154K,170R,180D
OR876691	P5_R2Wk4_GAG_33		2001		genomic RNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876740	P5_SCR_PBMC_49		2000		genomic DNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876739	P5_SCR_PBMC_50		2000		genomic DNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876738	P5_SCR_PBMC_52		2000		genomic DNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876737	P5_SCR_PBMC_54		2000		genomic DNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876736	P5_SCR_PBMC_55		2000		genomic DNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876735	P5_SCR_PBMC_56		2000		genomic DNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876734	P5_SCR_PBMC_58		2000		genomic DNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876733	P5_SCR_PBMC_63		2000		genomic DNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876732	P5_SCR_PBMC_64		2000		genomic DNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876731	P5_SCR_PBMC_65		2000		genomic DNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876730	P5_SCR_PBMC_70		2000		genomic DNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876729	P5_SCR_PBMC_72		2000		genomic DNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876728	P5_SCR_PBMC_74		2000		genomic DNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876727	P5_SCR_PBMC_76		2000		genomic DNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876726	P5_SCR_PBMC_77		2000		genomic DNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876725	P5_SCR_PBMC_79		2000		genomic DNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D
OR876724	P5_SCR_PBMC_80		2000		genomic DNA		Intact;subtype: B	1	231	6L,71D,83L,154K,170R,180D