Genbank References: capsid (p24)

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Genbank References: capsid (p24)

Authors	Title	Citation	E-value	# in Gb	#Pts	ART	Source	Cloning	StudyType
Zhou (2024)	Sequence Analysis of Inducible, Replication-Competent Virus Reveals No Evidence of HIV-1 Evolution During Suppressive Antiviral Therapy Indicating A Lack Of Ongoing Viral Replication	Unpublished	9.89e-158	156

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Accession	IsolateName	MolType	Source	Note	FirstAA	LastAA	MutList
PP405699	PID-1_1-1157R_H1-VOA-1.0.4	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6H,83M,87Q,96L,115V,116A,120H,148V,180D
PP405693	PID-1_1-5a4-1157R-1-5a4.0.2	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6H,83M,87Q,96L,115V,116A,120H,148V,180D
PP405694	PID-1_1-5d4-1157R-1-5d4.0.2	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6H,83M,87Q,96L,115V,116A,120H,148V,180D
PP405695	PID-1_1-5f-1157R-1-5f-PlasmaGa	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6H,83M,87Q,96L,115V,116A,120H,148V,180D
PP405696	PID-1_1-5g-1157R-1-5g-PlasmaGa	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6H,83M,87Q,96L,115V,116A,120H,148V,180D
PP405697	PID-1_1-6b-1157R-1-6b-PlasmaGa	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6H,83M,87Q,96L,115V,116A,120H,148V,180D
PP405698	PID-1_1-8d4-1157R-1-8d4.0.2	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6H,83M,87Q,96L,115V,116A,120H,148V,180D
PP405708	PID-1_10-R-H10-VOA-10.0.19	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6H,83M,87Q,96L,115V,116A,120H,148V,180D
PP405709	PID-1_12-R-H11-VOA-12.0.18	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6H,83M,87Q,96L,115V,116A,120H,148V,180D
PP405710	PID-1_13-R-H12-VOA-13.0.19	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6H,83M,87Q,96L,115V,116A,120H,148V,180D
PP405700	PID-1_2-627F-VOA-2.0.1	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6H,83M,87Q,96L,115V,116A,120H,148V,180D
PP405701	PID-1_3-R_H3-VOA-3.0.18	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6H,83M,87Q,96L,115V,116A,120H,148V,180D
PP405702	PID-1_4-R-H4-VOA-4.0.20	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6H,83M,87Q,96L,115V,116A,120H,148V,180D
PP405703	PID-1_5-R-H5-VOA-5.0.18	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6H,83M,87Q,96L,115V,116A,120H,148V,180D
PP405704	PID-1_6-R-H6-VOA-6.0.18	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6H,83M,87Q,96L,115V,116A,120H,148V,180D
PP405705	PID-1_7-R-H7-VOZ-7.0.19	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6H,83M,87Q,96L,115V,116A,120H,148V,180D
PP405706	PID-1_8-R-H8-VOA-8.0.19	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6H,83M,87Q,96L,115V,116A,120H,148V,180D
PP405707	PID-1_9-R-H9-VOA-9.0.19	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6H,83M,87Q,96L,115V,116A,120H,148V,180D
PP405726	PID-10_10-1c2-1157R-10-1c2-Pla	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,15L,83L,136M
PP405727	PID-10_10-2g2-1157R-10-2g2-Pla	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,15L,83L,136M
PP405728	PID-10_10-5a2-1157R-10-5a2-Pla	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,15L,83L,136M
PP405729	PID-10_10-7g2-1157R-10-7g2-Pla	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,15L,83L,136M
PP405730	PID-10_10-9c2-1641R-10-9c2-Pla	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,15L,83L,136M
PP405731	PID-10_102-1157R-102-GP-VOA-sk	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,15L,83L,136M
PP405732	PID-10_103-1157R-103-GP-VOA-sk	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,15L,83L,136M
PP405733	PID-10_107-1157R-107-GP-VOA-sk	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,15L,83L,136M
PP405734	PID-10_108-1157R-108-GP-VOA-sk	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,15L,83L,136M
PP405757	PID-12_116-1340R-116-GP-VOA-fi	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6M,27I,36I,41T,83L,87Q,120S,123A,135V,136M,148V,194S,208G
PP405758	PID-12_117-1340R-117-GP-VOA-fi	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6M,27I,36I,41T,83L,87Q,120S,123A,135V,136M,148V,194S,208G
PP405760	PID-12_119-721F-119-GagPol.0.1	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6M,27I,36I,41T,83L,87Q,120S,123A,135V,136M,148V,194S,208G
PP405755	PID-12_12-10b-721F-12-10b-Plas	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6M,27I,36I,41T,83L,87Q,120S,123A,135V,136M,148V,194S,208G
PP405756	PID-12_12-11a-721F-12-11a-Plas	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6M,27I,36I,41T,83L,87Q,120S,123A,135V,136M,148V,194S,208G
PP405750	PID-12_12-1f2-721F-12-1f2-Plas	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6M,27I,36I,41T,83L,87Q,120S,123A,135V,136M,148V,194S,208G
PP405759	PID-12_12-25-5_118_5p_HG_RNAMi	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6M,27I,36I,41T,83L,87Q,120S,123A,135V,136M,148V,194S,208G
PP405751	PID-12_12-2f2-721F-12-2f2-Plas	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6M,27I,36I,41T,83L,87Q,120S,123A,135V,136M,148V,194S,208G
PP405752	PID-12_12-8d-721F-12-8d-Plasma	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6M,27I,36I,41T,83L,87Q,120S,123A,135V,136M,148V,175K,194S,208G
PP405753	PID-12_12-8g-721F-12-8g-Plasma	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6M,27I,36I,41T,83L,87Q,120S,123A,135V,136M,148V,194S,208G
PP405754	PID-12_12-9c2-721F-12-9c2-Plas	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6M,27I,36I,41T,83L,87Q,120S,123A,135V,136M,148V,194S,208G
PP405761	PID-12_120-721F-120-GagPol.0.1	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6M,27I,36I,41T,83L,87Q,120S,123A,135V,136M,148V,194S,208G
PP405762	PID-12_121-721F-121-GagPol.0.1	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6M,27I,36I,41T,83L,87Q,120S,123A,135V,136M,148V,194S,208G
PP405795	PID-2_125-1157R-VOA-125.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,14P,15M,17A,27I,68I,83L,120H,128D,148V,180D,225S
PP405784	PID-2_14-1157R-VOA-14.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,14P,15M,17A,27I,68I,83L,120H,128D,148V,180D,225S
PP405785	PID-2_15-1157R-VOA-15.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,14P,15M,17A,27I,68I,83L,120H,128D,148V,180D,225S
PP405786	PID-2_16-1157R-VOA-16.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,14P,15M,17A,27I,68I,83L,120H,128D,148V,180D,225S
PP405787	PID-2_17-1157R-VOA-17.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,14P,15M,17A,27I,68I,83L,120H,128D,148V,180D,225S
PP405788	PID-2_18-1157R-VOA-18.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,14P,15M,17A,27I,68I,83L,120H,128D,148V,180D,225S
PP405789	PID-2_19-1641R-19-GP-VOA-skl2.	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,14P,15M,17A,27I,68I,83L,120H,128D,148V,180D,225S
PP405780	PID-2_2-8b-1157R-2-8d_GP-SGA-s	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14P,15M,17A,27I,68I,83L,120H,128D,148V,180D,225S
PP405781	PID-2_2-8d-1157R-2-8d-PlasmaGa	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14P,15M,17A,27I,68I,83L,120H,128D,148V,180D,225S
PP405782	PID-2_2-8e-1157R-2-8e-PlasmaGa	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14P,15M,17A,27I,68I,83L,120H,128D,148V,180D,225S
PP405783	PID-2_2-9f-1157R-2-9f-PlasmaGa	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14P,15M,17A,27I,68I,83L,120H,128D,148V,180D,225S
PP405790	PID-2_20-1157R-VOA-20.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,14P,15M,17A,27I,68I,83L,120H,128D,148V,180D,225S
PP405791	PID-2_21-1157R-VOA-21.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,14P,15M,17A,27I,68I,83L,120H,128D,148V,180D,225S
PP405792	PID-2_22-1157R-VOA-22.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,14P,15M,17A,27I,68I,83L,120H,128D,148V,180D,225S
PP405793	PID-2_23-1157R-VOA-23.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,14P,15M,17A,27I,68I,83L,120H,128D,148V,180D,225S
PP405794	PID-2_24-1157R-VOA-24.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,14P,15M,17A,27I,68I,83L,120H,128D,148V,180D,225S
PP405816	PID-3_25-1641R-VOA-25.0.3	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,87Q,91V,92Q,96I,98D,116A,120H,180D
PP405817	PID-3_26-1157R-VOA-26.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,87Q,91V,92Q,96I,98D,116A,120H,180D
PP405818	PID-3_27-1157R-VOA-27.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,87Q,91V,92Q,96I,98D,116A,120H,180D
PP405819	PID-3_28-1157R-VOA-28.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,87Q,91V,92Q,96I,98D,116A,120H,180D
PP405820	PID-3_29-1157R-VOA-29.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,87Q,91V,92Q,96I,98D,116A,120H,180D
PP405809	PID-3_3-1e7-1157R-3-1e7.0.2	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,87Q,91V,92Q,96I,98D,116A,120H,180D
PP405810	PID-3_3-2a7-1157R-3-2a7.0.2	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,87Q,91V,92Q,96I,98D,116A,120H,180D
PP405811	PID-3_3-2f7-1157R-3-2f7.0.2	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,87Q,91V,92Q,96I,98D,116A,120H,180D
PP405812	PID-3_3-3a5-1157R-3-3a5.0.2	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,87Q,91V,92Q,96I,98D,116A,120H,180D
PP405813	PID-3_3-3d5-1157R-3-3d5.0.2	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,87Q,91V,92Q,96I,98D,116A,120H,180D
PP405814	PID-3_3-3h7-1157R-3-3h7.0.2	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,87Q,91V,92Q,96I,98D,116A,120H,180D
PP405815	PID-3_3-5d5-1157R-3-5d5.0.2	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,87Q,91V,92Q,96I,98D,116A,120H,180D
PP405821	PID-3_30-1157R-VOA-30.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,87Q,91V,92Q,96I,98D,116A,120H,180D
PP405843	PID-4_32-1157R-VOA-32.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,27I,91V,116A,128D,148V,180D,225S
PP405844	PID-4_33-1157R-VOA-33.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,27I,91V,116A,128D,148V,180D,225S
PP405845	PID-4_34-1157R-VOA-34.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,27I,91V,116A,128D,148V,180D,225S
PP405846	PID-4_35-1157R-35-GP-VOA-final	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,27I,91V,116A,128D,148V,180D,225S
PP405847	PID-4_36-1157R-VOA-36.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,27I,91V,116A,128D,148V,180D,225S
PP405834	PID-4_4-2b3-1157R-4-2b3-Plasma	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,27I,91V,116A,128D,148V,180D,225S
PP405835	PID-4_4-2c3-1157R-4-2c3-Plasma	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,27I,91V,116A,128D,148V,180D,225S
PP405836	PID-4_4-2f3-1157R-4-2f3-Plasma	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,27I,91V,116A,128D,148V,180D,225S
PP405837	PID-4_4-3a3-1157R-4-3a3-Plasma	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,27I,91V,116A,128D,148V,180D,225S
PP405838	PID-4_4-7e-1157R-4-7e-PlasmaGa	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,27I,91V,116A,128D,148V,180D,225S
PP405839	PID-4_4-7h-1157R-4-7h-PlasmaGa	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,27I,91V,116A,128D,148V,180D,225S
PP405840	PID-4_4-8a-1157R-4-8a-PlasmaGa	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,27I,91V,116A,128D,148V,180D,225S
PP405841	PID-4_4-8h-1157R-4-8h-PlasmaGa	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,27I,91V,116A,128D,148V,180D,225S
PP405842	PID-4_4-9a-1157R-4-9a-PlasmaGa	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,27I,91V,116A,128D,148V,180D,225S
PP405867	PID-5_37-1157R-VOA-37.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	4R,5S,6L,33N,41V,50H,83L,91A,112E,116A,120S,125Q,132K,136M,178T,203R,225S
PP405868	PID-5_38-1157R-38-GP-VOA-skl.0	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	4R,5S,6L,33N,41V,50H,83L,91A,112E,116A,120S,125Q,132K,136M,178T,203R,225S
PP405869	PID-5_39-1157R-VOA-39.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	4R,5S,6L,33N,41V,50H,83L,91A,112E,116A,120S,125Q,132K,136M,178T,203R,225S
PP405870	PID-5_40-1157R-VOA-40.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	4R,5S,6L,33N,41V,50H,83L,91A,112E,116A,120S,125Q,132K,136M,178T,203R,225S
PP405871	PID-5_41-1157R-41-GP-VOA-skl.0	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	4R,5S,6L,33N,41V,50H,83L,91A,112E,116A,120S,125Q,132K,136M,178T,203R,225S
PP405872	PID-5_42-1157R-VOA-42.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	4R,5S,6L,33N,41V,50H,83L,91A,112E,116A,120S,125Q,132K,136M,178T,203R,225S
PP405866	PID-5_5-10f5-1157R-5-10f5.0.2	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	4R,5S,6L,33N,41V,50H,83L,91A,112E,116A,120S,125Q,132K,136M,178T,203R,225S
PP405858	PID-5_5-1a6-1157R-5-1a6.0.2	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	4R,5S,6L,33N,41V,50H,83L,91A,112E,116A,120S,125Q,132K,136M,178T,203R,225S
PP405859	PID-5_5-1f6-1157R-5-1f6.0.2	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	4R,5S,6L,33N,41V,50H,83L,91A,112E,116A,120S,125Q,132K,136M,178T,203R,225S
PP405860	PID-5_5-2f6-1157R-5-2f6.0.2	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	4R,5S,6L,33N,41V,50H,83L,91A,112E,116A,120S,125Q,132K,136M,178T,203R,225S
PP405861	PID-5_5-3a-1157R-5-3a-PlasmaGa	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	4R,5S,6L,33N,41V,50H,83L,91A,112E,116A,120S,125Q,132K,136M,178T,203R,225S
PP405862	PID-5_5-3b6-1157R-5-3b6.0.2	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	4R,5S,6L,33N,41V,50H,83L,91A,112E,116A,120S,125Q,132K,136M,178T,203R,225S
PP405863	PID-5_5-3c6-1157R-5-3c6.0.2	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	4R,5S,6L,33N,41V,50H,83L,91A,112E,116A,120S,125Q,132K,136M,178T,203R,225S
PP405864	PID-5_5-3f-1157R-5-3f-PlasmaGa	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	4R,5S,6L,33N,41V,50H,83L,91A,112E,116A,120S,125Q,132K,136M,178T,203R,225S
PP405865	PID-5_5-3h6-1157R-5-3h6.0.2	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	4R,5S,6L,33N,41V,50H,83L,91A,112E,116A,120S,125Q,132K,136M,178T,203R,225S
PP405885	PID-6_6-10c2_envPlasma	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,15L,27I,41T,83M,86A,87Q,91V,96I,116A,120S,124V,136M,180D,225S
PP405881	PID-6_6-11h_envPlasma	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,15L,27I,41T,83M,86A,87Q,91V,96I,116A,120S,124V,136M,180D,225S
PP405882	PID-6_6-1d2_envPlasma	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,15L,27I,41T,83M,86A,87Q,91V,96I,116A,120S,124V,136M,180D,225S
PP405886	PID-6_6-2a5-1157R-6-2a5.0.2	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,15L,27I,41T,83M,86A,87Q,91V,96I,116A,120S,124V,136M,180D,225S
PP405889	PID-6_6-43_gpVOA	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,15L,27I,41T,83M,86A,87Q,91V,96I,116A,120S,124V,136M,180D,225S
PP405890	PID-6_6-44_gpVOA	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,15L,27I,41T,83M,86A,87Q,91V,96I,116A,120S,124V,136M,180D,225S
PP405891	PID-6_6-45_gpVOA	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,15L,27I,41T,83M,86A,87Q,91V,96I,116A,120S,124V,136M,180D,225S
PP405892	PID-6_6-48_gpVOA	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,15L,27I,41T,83M,86A,87Q,91V,96I,116A,120S,124V,136M,180D,225S
PP405887	PID-6_6-7c6-1157R-6-7c6.0.2	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,15L,27I,41T,83M,86A,87Q,91V,96I,116A,120S,124V,136M,180D,225S
PP405888	PID-6_6-7f6-1157R-6-7f6.0.2	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,15L,27I,41T,83M,86A,87Q,91V,96I,116A,120S,124V,136M,180D,225S
PP405883	PID-6_6-8c_envPlasma	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,15L,27I,41T,83M,86A,87Q,91V,96I,116A,120S,124V,136M,180D,225S
PP405884	PID-6_6-8f_envPlasma	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,15L,27I,41T,83M,86A,87Q,91V,96I,116A,120S,124V,136M,180D,225S
PP405914	PID-7_50-1157R-VOA-50.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,27I,83L,91V,110N,148V
PP405915	PID-7_51-1157R-51-GagPol.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,27I,83L,91V,110N,148V
PP405916	PID-7_53-1157R-53-GagPol.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,27I,83L,91V,110N,148V
PP405917	PID-7_54-1157R-54-GagPol.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,27I,83L,91V,110N,148V
PP405918	PID-7_59-1157R-59-GagPol-cor.0	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,27I,83L,91V,110N,148V
PP405907	PID-7_7-2b3-1157R-7-2b3-Plasma	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,27I,83L,91V,110N,148V
PP405908	PID-7_7-2d3-1157R-7-2d3-Plasma	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,27I,83L,91V,110N,148V
PP405909	PID-7_7-5d-1157R-7-5d_GPSGA-fi	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,27I,83L,91V,110N,148V
PP405913	PID-7_7-5d2-1157R-7-5d2-Plasma	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,27I,83L,91V,110N,148V
PP405910	PID-7_7-8a5-1157R-7-8a5.0.2	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,27I,83L,91V,110N,148V
PP405911	PID-7_7-9a4-1157R-7-9a4.0.2	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,27I,83L,91V,110N,148V
PP405912	PID-7_7-9f5-1157R-7-9f5.0.2	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,27I,83L,91V,110N,148V
PP405938	PID-8_63-1641R-gpVOA-63.0.4	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,27I,83L,87Q,91V,98D,120S,225S
PP405939	PID-8_64-1157R-64-GagPol.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,27I,83L,87Q,91V,98D,120S,225S
PP405940	PID-8_66-1157R-66-GP-VOA-skl5.	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,27I,83L,87Q,91V,98D,120S,225S
PP405941	PID-8_69-1157R-gpVOA-69.0.2	genomic RNA	viral outgrowth assay	5'-half genome;subtype: B	1	231	6L,27I,83L,87Q,91V,98D,120S,225S
PP405932	PID-8_8-2h2-1157R-8-2h2-Plasma	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,27I,83L,87Q,91V,98D,120S,225S
PP405933	PID-8_8-7a-1157R-8-7A-GagPol.0	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,27I,83L,87Q,91V,98D,120S,225S
PP405934	PID-8_8-7f-1157R-8-7f-PlasmaGa	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,27I,83L,87Q,91V,98D,120S,225S
PP405935	PID-8_8-8c3-1157R-8-8c3-Plasma	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,27I,83L,87Q,91V,98D,120S,225S
PP405936	PID-8_8-9b2-1641R-8-9b2-Plasma	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,27I,83L,87Q,91V,98D,120S,225S
PP405937	PID-8_8-9e3-1157R-8-9e3-Plasma	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,27I,83L,87Q,91V,98D,120S,225S
PP405651	PID-Ct_1-2b2-1157R-1-2b2_5HG.0	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14S,15L,41T,83L,86I,91V,116A,120S,124V,154K,180D
PP405652	PID-Ct_1-2e2-1157R-1-2e2_5HG.0	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14S,15L,41T,83L,86I,91V,116A,120S,124V,154K,180D
PP405653	PID-Ct_1-3b-1641R-1-3b_5HG.0.4	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14S,15L,41T,83L,86I,91V,116A,120S,124V,154K,180D
PP405654	PID-Ct_1-3b2-721F-1-3b2_5HG.0.	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14S,15L,41T,83L,86I,91V,116A,120S,124V,154K,180D
PP405655	PID-Ct_1-3d4-1157R-1-3d4_5HG.0	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14S,15L,41T,83L,86I,91V,116A,120S,124V,154K,180D
PP405656	PID-Ct_1-3g4-721F-1-3g4_5HG-2.	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14S,15L,41T,83L,86I,91V,116A,120S,124V,154K,180D
PP405657	PID-Ct_1-8a3-721F-1-8a3_5HG.0.	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14S,15L,41T,83L,86I,91V,116A,120S,124V,154K,180D
PP405658	PID-Ct_1-8b5-721F-1-8b5_5HG.0.	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14S,15L,41T,83L,86I,91V,116A,120S,124V,154K,180D
PP405659	PID-Ct_1-8d3-1157R-1-8d3_5HG.0	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14S,15L,41T,83L,86I,91V,116A,120S,124V,154K,180D
PP405660	PID-Ct_1-8f3-721F-1-8f3_5HG.0.	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14S,15L,41T,83L,86I,91V,116A,120S,124V,154K,180D
PP405661	PID-Ct_1-9c3-1157R-1-9c3_5HG.0	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14S,15L,41T,83L,86I,91V,116A,120S,124V,154K,180D
PP405662	PID-Ct_1-9g5-721F-1-9g5_5HG.0.	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14S,15L,41T,83L,86I,91V,116A,120S,124V,154K,180D
PP405672	PID-Ct_2-10a-1641R-2-10a_5HG.0	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14S,15L,41T,83L,86I,91V,110N,112A,116A,120S,124V,154K,180D,208G
PP405673	PID-Ct_2-10c-721F-2-10c_5HG.0.	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14S,15L,41T,83L,86I,91V,110N,112A,116A,120S,124V,154K,180D,208G
PP405674	PID-Ct_2-10g3-1157R-2-10g3_5HG	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14S,15L,41T,83L,86I,91V,110N,112A,116A,120S,124V,154K,180D,208G
PP405663	PID-Ct_2-3a2-1641R-2-3a2_5HG.0	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14S,15L,41T,83L,86I,91V,110N,112A,116A,120S,124V,154K,180D,208G
PP405664	PID-Ct_2-3a4-721F-2-3a4_5HG.0.	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14S,15L,41T,83L,86I,91V,110N,112A,116A,120S,124V,154K,180D,208G
PP405665	PID-Ct_2-3d2-1157R-2-3d2_5HG.0	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14S,15L,41T,83L,86I,91V,110N,112A,116A,120S,124V,154K,180D,208G
PP405666	PID-Ct_2-3e2-1157R-2-3e2_5HG.0	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14S,15L,41T,83L,86I,91V,110N,112A,116A,120S,124V,154K,180D,208G
PP405667	PID-Ct_2-4f2-1157R-2-4f2_5HG.0	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14S,15L,41T,83L,86I,91V,110N,112A,116A,120S,124V,142I,154K,180D,208G
PP405668	PID-Ct_2-5e2-1641R-2-5e2_5HG.0	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14S,15L,41T,83L,86I,91V,110N,112A,116A,120S,124V,154K,180D,208G
PP405669	PID-Ct_2-9f3-1157R-2-9f3_5HG.0	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14S,15L,41T,83L,86I,91V,110N,112A,116A,120S,124V,154K,180D,208G
PP405670	PID-Ct_2-9g3-1641R-2-9g3_5HG.0	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14S,15L,41T,83L,86I,91V,110N,112A,116A,120S,124V,154K,180D,208G
PP405671	PID-Ct_2-9h3-1157R-2-9h3_5HG.0	genomic RNA	plasma specimen	5'-half genome;subtype: B	1	231	6L,14S,15L,41T,83L,86I,91V,110N,112A,116A,120S,124V,154K,180D,208G

Genbank References: capsid (p24)

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