<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Hartana (2022) Immune correlates of HIV-1 reservoir cell decline in early-treated infants Cell Rep 40 (3), 111126 (2022) 2.21e-157 302          

Download sequences

AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
MZ766675074-A-105-1-3_w0_1Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MZ766676074-A-105-1-3_w0_2Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MZ766677074-A-105-1-3_w0_3Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MZ766678074-A-105-1-3_w0_4Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MZ766853074-A-105-1-3_w0_5Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116N,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S
MZ766854074-A-105-1-3_w0_6Botswanagenomic DNAsubtype: C12316L,8R,23*,27I,36I,41T,71D,83L,97K,100K,116N,120S,128D,137R,148V,154K,169F,178T,180D,184*,187D,203R,208E,210S,220E,225S
MZ766855074-A-105-1-3_w0_7Botswanagenomic DNAsubtype: C12316L,23*,27I,36I,41T,71D,80*,83L,97K,100K,116N,117*,120S,128D,133*,137R,148V,154K,156R,169F,178T,180D,184*,187D,203R,206R,208E,210S,225S
MZ766856074-A-105-1-3_w0_8Botswanagenomic DNAsubtype: C12316L,10I,23*,27I,36I,41T,61R,71D,83L,97K,100K,106E,116N,117*,120S,128D,133*,137K,148V,154K,156R,167Q,169F,178T,180D,184*,187D,203R,206R,208E,210S,214I,220E,225S,229K
MZ766679074-A-106-1-6_w0_10Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MZ766680074-A-106-1-6_w0_11Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MZ766681074-A-106-1-6_w0_12Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MZ766683074-A-106-1-6_w0_14Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MZ766684074-A-106-1-6_w0_9Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83L,91A,96I,116A,120G,124V,128D,148V,154K,169F,178T,187D,191I,203R,208G
MZ766857074-A-109-1-1_w0_15Botswanagenomic DNAsubtype: C12316L,27I,31G,33N,41T,71D,75D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MZ766858074-A-109-1-1_w0_16Botswanagenomic DNAsubtype: C12316L,23*,27I,31G,33N,41T,71D,75D,80*,83L,91V,115V,116A,117*,120S,128D,133*,148V,154K,169F,178T,180D,187D,203R,208G,225S
MZ766685074-A-109-1-1_w0_17Botswanagenomic DNAsubtype: C12316L,27I,31G,33N,41T,71D,75D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MZ766686074-A-109-1-1_w0_18Botswanagenomic DNAsubtype: C12316L,27I,31G,33N,41T,71D,75D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MZ766859074-A-109-1-1_w0_19Botswanagenomic DNAsubtype: C12316L,23*,27I,31G,33N,41T,71D,75D,83L,91V,115V,116A,117*,120S,128D,137R,148V,154K,169F,178T,180D,187D,203R,208G,225S
MZ766860074-A-109-1-1_w0_20Botswanagenomic DNAsubtype: C12316L,23*,27I,31G,33N,41T,71D,75D,83L,91V,115V,116A,117*,120S,128D,137R,148V,154K,169F,178T,180D,187D,203R,208G,225S
MZ766861074-A-109-1-1_w0_21Botswanagenomic DNAsubtype: C12316L,27I,31G,33N,41T,71D,75D,83L,91V,115V,116A,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MZ766687074-A-110-1-4_w0_22Botswanagenomic DNAsubtype: C12316L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MZ766688074-A-110-1-4_w0_23Botswanagenomic DNAsubtype: C12316L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MZ766689074-A-110-1-4_w0_24Botswanagenomic DNAsubtype: C12316L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MZ766690074-A-110-1-4_w0_25Botswanagenomic DNAsubtype: C12316L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MZ766691074-A-110-1-4_w0_26Botswanagenomic DNAsubtype: C12316L,15M,27I,41T,50S,54S,71D,83T,91V,116A,128D,148V,169F,178T,187D,191I,203R,208G,225S
MZ766753074-AP-112-1-3_w84_27Botswanagenomic DNAsubtype: C12316L,10I,14S,15L,23*,27I,31G,33K,41T,68I,71D,80*,83L,100K,106R,110N,115V,116A,117*,120S,128D,133*,137R,148V,154K,156R,169F,173K,177S,184*,187D,203R,206R,207A,208E,210S,220R,225S
MZ766582074-AP-113-1-6_w0_28Botswanagenomic DNAsubtype: C12316L,15L,27I,41T,50S,54S,71D,83T,86A,91V,120G,123A,148V,169F,178T,203R,225S
MZ766755074-AP-113-1-6_w84_30Botswanagenomic DNAsubtype: C12316L,15L,27I,41T,50S,54S,71D,83T,86A,91V,120G,123S,148V,169F,178T,203R,225S
MZ766756074-AP-113-1-6_w84_31Botswanagenomic DNAsubtype: C12316L,15L,23*,27I,41T,50S,54S,71D,81N,83T,86A,91V,96I,97K,106E,117*,120G,123A,127E,128K,133*,148V,159K,166N,169F,178T,184*,212K,214I,222E,225S
MZ766757074-AP-113-1-6_w84_32Botswanagenomic DNAsubtype: C12316L,15L,27I,41T,50S,54S,71D,83T,86A,91V,120G,123A,148V,169F,178T,203R,225S
MZ766583074-AP-113-1-6_w84_33Botswanagenomic DNAsubtype: C12316L,15L,27I,41T,50S,54S,71D,83T,86A,91V,120G,123A,148V,169F,178T,203R,225S
MZ766759074-AP-113-1-6_w84_35Botswanagenomic DNAsubtype: C12316L,15L,27I,41T,50S,54S,71D,83T,86A,91V,120G,123A,148V,169F,178T,203R,225S
MZ766760074-AP-113-1-6_w84_36Botswanagenomic DNAsubtype: C12316L,15L,23*,27I,41T,50S,54S,71D,81N,83T,86A,91V,96I,97K,106E,117*,120G,123A,127E,128K,133*,148V,159K,166N,169F,178T,184*,212K,214I,222E,225S
MZ766762074-AP-113-1-6_w84_38Botswanagenomic DNAsubtype: C12316L,15L,27I,41T,50S,54S,71D,83T,86A,91V,120G,123A,148V,169F,178T,203R,225S
MZ766763074-AP-113-1-6_w84_39Botswanagenomic DNAsubtype: C12316L,15L,27I,41T,50S,54S,71D,83T,86A,91V,120G,123A,148V,169F,178T,203R,225S
MZ766584074-AP-113-1-6_w84_41Botswanagenomic DNAsubtype: C12316L,15L,27I,41T,50S,54S,71D,83T,86A,91V,120G,123A,148V,169F,178T,203R,225S
MZ766585074-AP-115-1-5_w0_42Botswanagenomic DNAsubtype: C12316L,15L,27I,33N,54S,58A,71D,83L,91V,110N,116A,120A,128D,148V,160S,169F,171V,180D,187D,207Q,208G
MZ766765074-AP-115-1-5_w0_43Botswanagenomic DNAsubtype: C12316L,15L,27I,33N,54S,58A,71D,83L,91V,110N,116A,120A,128D,148V,160S,169F,171V,180D,187D,207Q,208G
MZ766586074-AP-115-1-5_w0_44Botswanagenomic DNAsubtype: C12316L,15L,27I,33N,54S,58A,71D,83L,91V,110N,116A,120A,128D,148V,160S,169F,171V,180D,187D,207Q,208G
MZ766587074-AP-115-1-5_w0_45Botswanagenomic DNAsubtype: C12316L,15L,27I,33N,54S,58A,71D,83L,91V,110N,116A,120A,128D,148V,160S,169F,171V,180D,187D,207Q,208G
MZ766588074-AP-115-1-5_w0_46Botswanagenomic DNAsubtype: C12316L,15L,27I,33N,54S,58A,71D,83L,91V,110N,116A,120A,128D,148V,160S,169F,171V,180D,187D,207Q,208G
MZ766589074-AP-115-1-5_w0_47Botswanagenomic DNAsubtype: C12316L,15L,27I,33N,54S,58A,71D,83L,91V,110N,116A,120A,128D,148V,160S,169F,171V,180D,187D,207Q,208G
MZ766767074-AP-115-1-5_w84_49Botswanagenomic DNAsubtype: C12313M,6L,8R,11I,15L,23*,27I,33N,54S,58A,71D,80*,81N,83L,89R,91V,96I,97K,98K,100K,101R,106R,110N,116A,117*,120A,127K,128D,133*,137S,142I,143K,148V,156R,160S,169F,171V,180D,184*,187D,207Q,208K,212K,220R,222R,229K
MZ766590074-AP-116-1-1_w24_51Botswanagenomic DNAsubtype: C12316L,14P,15L,27I,41T,56M,71D,83L,86T,87Q,96I,98D,115M,116T,120G,148V,154K,169F,178T,199R,200S,203R,208G
MZ766591074-AP-116-1-1_w84_53Botswanagenomic DNAsubtype: C12316L,14P,15L,27I,41T,56M,71D,83L,86T,87Q,96I,98D,115M,116T,120G,148V,154K,169F,178T,199R,200S,203R,208G
MZ766771074-AP-116-1-1_w84_55Botswanagenomic DNAsubtype: C12316L,14P,15L,27I,41T,56M,71D,83L,86T,87Q,96I,98D,115M,116T,120G,148V,154K,169F,178T,199R,200S,203R,208G
MZ766772074-AP-116-1-1_w84_56Botswanagenomic DNAsubtype: C12316L,14P,15L,27I,41T,56M,71D,83L,86T,87Q,96I,98D,115M,116T,120G,148V,154K,169F,178T,199R,200S,203R,208G
MZ766592074-AP-116-1-1_w84_57Botswanagenomic DNAsubtype: C12316L,14P,15L,27I,41T,56M,71D,83L,86T,87Q,96I,98D,115M,116T,120G,148V,154K,169F,178T,199R,200S,203R,208G
MZ766593074-AP-116-1-1_w84_59Botswanagenomic DNAsubtype: C12316L,14P,15L,27I,41T,56M,71D,83L,86T,87Q,96I,98D,115M,116T,120G,148V,154K,169F,178T,199R,200S,203R,208G
MZ766594074-AP-116-1-1_w84_60Botswanagenomic DNAsubtype: C12316L,14P,15L,27I,41T,56M,71D,83L,86T,87Q,96I,98D,115M,116T,120G,148V,154K,169F,178T,199R,200S,203R,208G
MZ766595074-AP-116-1-1_w84_61Botswanagenomic DNAsubtype: C12316L,14P,15L,27I,41T,56M,71D,83L,86T,87Q,96I,98D,115M,116T,120G,148V,154K,169F,178T,183I,199R,200S,203R,208G
MZ766596074-AP-116-1-1_w84_62Botswanagenomic DNAsubtype: C12316L,14P,15L,27I,41T,56M,71D,83L,86T,87Q,96I,98D,115M,116T,120G,148V,154K,169F,178T,199R,200S,203R,208G
MZ766597074-AP-116-1-1_w84_63Botswanagenomic DNAsubtype: C12316L,14P,15L,27I,41T,56M,71D,83L,86T,87Q,96I,98D,115M,116T,120G,148V,154K,169F,178T,199R,200S,203R,208G
MZ766774074-AP-118-1-0_w0_64Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83L,91V,110N,116A,120S,128D,148V,153V,154K,169F,171I,177S,187D,203R,204G,207A,208G
MZ766775074-AP-118-1-0_w0_65Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83L,91V,110N,116A,120S,128D,148V,153V,154K,169F,171I,177S,187D,203R,204G,207A,208G
MZ766598074-AP-118-1-0_w0_66Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83L,91V,110N,116A,120S,128D,148V,153V,154K,169F,171I,177S,187D,203R,204G,207A,208G
MZ766599074-AP-118-1-0_w0_67Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83L,91V,110N,116A,120S,128D,148V,153V,154K,169F,171I,177S,187D,203R,204G,207A,208G
MZ766600074-AP-118-1-0_w0_68Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83L,91V,110N,116A,120S,128D,148V,153V,154K,169F,171I,177S,187D,203R,204G,207A,208G
MZ766601074-AP-118-1-0_w0_69Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83L,91V,110N,116A,120S,128D,148V,153V,154K,169F,171I,177S,187D,203R,204G,207A,208G
MZ766776074-AP-118-1-0_w0_70Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83L,91V,110N,116A,120S,128D,148V,153V,154K,169F,171I,177S,187D,203R,204G,207A,208G
MZ766602074-AP-118-1-0_w0_71Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83L,91V,110N,116A,120S,128D,148V,153V,154K,169F,171I,177S,187D,203R,204G,207A,208G
MZ766777074-AP-118-1-0_w0_72Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83L,91V,110N,116A,120S,128D,148V,153V,154K,169F,171I,177S,187D,203R,204G,207A,208G
MZ766603074-AP-118-1-0_w0_73Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83L,91V,110N,116A,120S,128D,148V,153V,154K,169F,171I,177S,187D,203R,204G,207A,208G
MZ766604074-AP-118-1-0_w0_74Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83L,91V,110N,116A,120S,128D,148V,153V,154K,169F,171I,177S,187D,203R,204G,207A,208G
MZ766778074-AP-118-1-0_w0_75Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83L,91V,110N,116A,120S,128D,148V,153V,154K,169F,171I,177S,187D,203R,204G,207A,208G
MZ766605074-AP-118-1-0_w0_76Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83L,91V,110N,116A,120S,128D,148V,153V,154K,169F,171I,177S,187D,203R,204G,207A,208G
MZ766606074-AP-119-1-3_w0_100Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766780074-AP-119-1-3_w0_101Botswanagenomic DNAsubtype: C12316L,23*,27I,41T,60K,71D,80*,91A,96I,116T,120S,124V,137R,148V,156R,169F,178T,180D,184*,187D,203R,208G
MZ766607074-AP-119-1-3_w0_102Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766608074-AP-119-1-3_w0_103Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766781074-AP-119-1-3_w0_104Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766782074-AP-119-1-3_w0_105Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766609074-AP-119-1-3_w0_106Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766610074-AP-119-1-3_w0_108Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766784074-AP-119-1-3_w0_109Botswanagenomic DNAsubtype: C12316L,8R,23*,27I,41T,71D,80*,91A,96I,116T,117*,120S,124V,137R,148V,169F,178T,180D,184*,187D,203R,208G,220R
MZ766786074-AP-119-1-3_w0_111Botswanagenomic DNAsubtype: C12316L,8R,23*,27I,41T,46R,60R,71D,80*,82K,89R,91A,96I,100K,106R,116T,117*,120S,124V,133*,137K,148V,156R,167Q,169F,178T,180D,184*,187D,203R,208E,223R
MZ766611074-AP-119-1-3_w0_112Botswanagenomic DNAsubtype: C12316F,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766612074-AP-119-1-3_w0_113Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766613074-AP-119-1-3_w0_114Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766787074-AP-119-1-3_w0_115Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766788074-AP-119-1-3_w0_116Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766789074-AP-119-1-3_w0_117Botswanagenomic DNAsubtype: C12316L,23*,27I,41T,60E,71N,91A,96I,116T,120S,124V,137R,148V,169F,178T,180N,184*,187D,203R,208G,212K,220R
MZ766790074-AP-119-1-3_w0_118Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766614074-AP-119-1-3_w0_119Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766791074-AP-119-1-3_w0_120Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,80*,91A,96I,116T,120S,124V,137R,148V,156R,169F,178T,180D,187D,203R,208G,225S
MZ766792074-AP-119-1-3_w0_121Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766615074-AP-119-1-3_w0_122Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766616074-AP-119-1-3_w0_123Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766793074-AP-119-1-3_w0_124Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,80*,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766794074-AP-119-1-3_w0_78Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766617074-AP-119-1-3_w0_79Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766618074-AP-119-1-3_w0_80Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766795074-AP-119-1-3_w0_81Botswanagenomic DNAsubtype: C12316L,23*,27I,41T,71D,80*,91A,96I,116T,120S,124V,127E,148V,156R,169F,178T,180D,187D,203R,208G
MZ766619074-AP-119-1-3_w0_82Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766796074-AP-119-1-3_w0_83Botswanagenomic DNAsubtype: C12316L,27I,41T,60E,71D,80*,91A,96I,116T,120S,124V,148V,169F,178T,180D,184*,187D,203R,208E
MZ766620074-AP-119-1-3_w0_84Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766621074-AP-119-1-3_w0_85Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766797074-AP-119-1-3_w0_86Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766798074-AP-119-1-3_w0_87Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,117*,120S,124V,148V,169F,178T,180D,187D,203R,208E
MZ766622074-AP-119-1-3_w0_88Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766799074-AP-119-1-3_w0_89Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766800074-AP-119-1-3_w0_90Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766623074-AP-119-1-3_w0_91Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766624074-AP-119-1-3_w0_92Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766801074-AP-119-1-3_w0_93Botswanagenomic DNAsubtype: C12316L,27I,41T,60E,71D,80*,81N,83I,91A,96I,106E,113K,116T,117*,120S,124V,128K,132K,137E,143K,148V,159K,162K,169F,175K,178T,180N,185I,187D,203R,208G,212K,213K,214I,215I,223E,229K
MZ766802074-AP-119-1-3_w0_94Botswanagenomic DNAsubtype: C12316L,23*,27I,41T,71D,80*,91A,96I,116T,117*,120S,124V,137R,148V,152N,156R,169F,178T,180D,184*,187D,194T,203R,208E,223R
MZ766625074-AP-119-1-3_w0_95Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766803074-AP-119-1-3_w0_96Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766804074-AP-119-1-3_w0_97Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766626074-AP-119-1-3_w0_98Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766627074-AP-119-1-3_w0_99Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766628074-AP-119-1-3_w84_125Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766805074-AP-119-1-3_w84_126Botswanagenomic DNAsubtype: C12316L,23*,27I,41T,71D,80*,91A,96I,101R,116T,117*,120S,124V,148V,156R,169F,178T,180D,184*,187D,203R,208E
MZ766629074-AP-119-1-3_w84_127Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766806074-AP-119-1-3_w84_128Botswanagenomic DNAsubtype: C12316L,23*,27I,41T,46R,71D,75K,80*,91A,96I,98K,100K,116T,120S,124V,137K,148V,156R,167Q,169F,178T,180D,184*,187D,203R,206R,208G,220E,229K
MZ766630074-AP-119-1-3_w84_129Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766807074-AP-119-1-3_w84_130Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,133*,137R,148V,169F,178T,180D,187D,203R,208G
MZ766631074-AP-119-1-3_w84_131Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766808074-AP-119-1-3_w84_132Botswanagenomic DNAsubtype: C12316L,23*,27I,41T,60R,71D,80*,91A,96I,101R,116T,117*,120S,124V,137R,148V,156R,169F,178T,180D,184*,187D,203R,208E
MZ766809074-AP-119-1-3_w84_133Botswanagenomic DNAsubtype: C12316L,23*,27I,41T,71D,80*,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,206R,208G,222R
MZ766632074-AP-119-1-3_w84_134Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766810074-AP-119-1-3_w84_135Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766633074-AP-119-1-3_w84_136Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766634074-AP-119-1-3_w84_137Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766635074-AP-119-1-3_w84_138Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766636074-AP-119-1-3_w84_139Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766811074-AP-119-1-3_w84_140Botswanagenomic DNAsubtype: C12316L,10I,27I,41T,60R,71D,80*,91A,96I,116T,120S,124V,127R,148V,156R,169F,178T,180D,187D,203R,208G
MZ766812074-AP-119-1-3_w84_141Botswanagenomic DNAsubtype: C12316L,10I,23*,27I,41T,71D,80*,91A,96I,100K,116T,117*,120S,124V,127R,133*,137R,148V,156R,169F,175K,178T,180D,184*,187D,203R,208K,223R
MZ766637074-AP-119-1-3_w84_142Botswanagenomic DNAsubtype: C12316L,10I,23*,27I,41T,71D,80*,91A,96I,100K,116T,117*,120S,124V,127R,133*,137R,148V,156R,169F,175K,178T,180D,184*,187D,203R,208K,223R
MZ766638074-AP-119-1-3_w84_143Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,91A,96I,116T,120S,124V,148V,169F,178T,180D,187D,203R,208G
MZ766639074-AP-127-1-4_w84_147Botswanagenomic DNAsubtype: C12316L,14S,15L,27I,45D,54S,58A,71D,83T,91V,96I,116A,128D,148V,154K,163E,169F,178T,187D,203R,208G,217S,225S,230I
MZ766640074-AP-130-1-1_w0_150Botswanagenomic DNAsubtype: C12316L,14S,15L,27I,41T,71D,91V,120S,128D,148V,154K,169F,171C,178T,180D,203R
MZ766819074-AP-130-1-1_w0_152Botswanagenomic DNAsubtype: C12316L,14S,15L,27I,41T,71D,91V,120S,128D,148V,154K,169F,171C,178T,180D,203R
MZ766641074-AP-130-1-1_w0_153Botswanagenomic DNAsubtype: C12316L,14S,15L,27I,41T,71D,91V,120S,128D,148V,154K,169F,171C,178T,180D,203R
MZ766820074-AP-130-1-1_w0_154Botswanagenomic DNAsubtype: C12316L,14S,15L,23*,27I,41T,71D,80*,89R,91V,116R,120S,127E,128D,148V,154K,156R,169F,171C,178T,180D,184*,203R,220R
MZ766822074-AP-131-1-4_w0_156Botswanagenomic DNAsubtype: C12316L,10H,15L,27I,41T,71D,83L,116A,120S,148V,154K,169F,178T,180D,187D,203R,208G,210S
MZ766825074-AP-131-1-4_w0_159Botswanagenomic DNAsubtype: C12316L,10H,15L,27I,41T,71D,83L,116A,120S,148V,154K,169F,178T,180D,187D,203R,208G,210S
MZ766826074-AP-131-1-4_w0_160Botswanagenomic DNAsubtype: C12316L,10H,15L,27I,41T,71D,83L,116A,120S,148V,154K,169F,178T,180D,187D,203R,208G,210S
MZ766828074-AP-131-1-4_w0_162Botswanagenomic DNAsubtype: C12316L,10H,15L,27I,41T,71D,83L,116A,120S,148V,154K,169F,178T,180D,187D,203R,208G,210S
MZ766829074-AP-131-1-4_w84_163Botswanagenomic DNAsubtype: C12316L,10H,15L,27I,41T,71D,83L,116A,120S,148V,154K,169F,178T,180D,187D,203R,208G,210S
MZ766642074-AP-134-1-6_w0_164Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83L,96L,116A,124V,128D,148V,154K,169F,170R,178T,180D,203R,208G,225S
MZ766643074-AP-134-1-6_w0_165Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83L,96L,116A,124V,128D,148V,154K,169F,170R,178T,180D,203R,208G,225S
MZ766832074-AP-134-1-6_w0_168Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83L,96L,116A,124V,128D,148V,154K,169F,170R,178T,180D,203R,208G,225S
MZ766833074-AP-134-1-6_w0_169Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83L,96L,116A,124V,128D,148V,154K,169F,170R,178T,180D,203R,208G,225S
MZ766834074-AP-134-1-6_w0_170Botswanagenomic DNAsubtype: C12316L,23*,27I,41T,71D,83L,96L,116A,117*,124V,127E,128D,137R,148V,154K,156R,169F,170R,178T,180D,184*,203R,206R,208E,225S,229K
MZ766836074-AP-134-1-6_w84_172Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83L,96L,116A,124V,128D,148V,154K,169F,170R,178T,180D,203R,208G,225S
MZ766837074-AP-134-1-6_w84_173Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83L,96L,116A,124V,128D,148V,154K,169F,170R,178T,180D,203R,208G,225S
MZ766644074-AP-138-1-4_w0_174Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766645074-AP-138-1-4_w0_175Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766646074-AP-138-1-4_w0_176Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766647074-AP-138-1-4_w0_178Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,154K,169F,178T,187D,200N,203R,208G,225S
MZ766648074-AP-138-1-4_w0_179Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766839074-AP-138-1-4_w0_180Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,97K,116A,124V,128D,148V,169F,178T,184*,187D,200N,203R,208G,225S
MZ766840074-AP-138-1-4_w0_181Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766649074-AP-138-1-4_w0_182Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766650074-AP-138-1-4_w0_183Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766651074-AP-138-1-4_w0_184Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766652074-AP-138-1-4_w0_185Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766841074-AP-138-1-4_w0_186Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,100S,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766653074-AP-138-1-4_w0_187Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766654074-AP-138-1-4_w0_188Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766655074-AP-138-1-4_w0_189Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766842074-AP-138-1-4_w0_190Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,80*,83L,116A,124V,127R,128D,148V,169F,178T,184*,187D,200N,203R,208G,220R,223R,225S,229K
MZ766656074-AP-138-1-4_w0_191Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766657074-AP-138-1-4_w0_192Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766658074-AP-138-1-4_w0_193Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766843074-AP-138-1-4_w0_194Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766844074-AP-138-1-4_w0_195Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766845074-AP-138-1-4_w0_196Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766659074-AP-138-1-4_w0_197Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766660074-AP-138-1-4_w0_198Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766661074-AP-138-1-4_w0_200Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766662074-AP-138-1-4_w0_201Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,160S,169F,178T,187D,200N,203R,208G,225S
MZ766663074-AP-138-1-4_w0_202Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766664074-AP-138-1-4_w0_203Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766665074-AP-138-1-4_w0_205Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766848074-AP-138-1-4_w0_206Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766666074-AP-138-1-4_w0_207Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766849074-AP-138-1-4_w0_208Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,164C,169F,178T,187D,200N,203R,208G,225S
MZ766667074-AP-138-1-4_w0_209Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766668074-AP-138-1-4_w0_210Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766669074-AP-138-1-4_w0_211Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766670074-AP-138-1-4_w0_212Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766850074-AP-138-1-4_w0_213Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766671074-AP-138-1-4_w0_214Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766672074-AP-138-1-4_w0_215Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766673074-AP-138-1-4_w0_216Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766674074-AP-138-1-4_w0_217Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766851074-AP-138-1-4_w0_218Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,124V,128D,148V,169F,178T,187D,200N,203R,208G,225S
MZ766692074-M-201-2-5_w0_220Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MZ766693074-M-201-2-5_w0_221Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MZ766694074-M-201-2-5_w0_222Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MZ766695074-M-201-2-5_w0_223Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MZ766696074-M-201-2-5_w0_224Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MZ766864074-M-201-2-5_w0_227Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MZ766697074-M-201-2-5_w0_229Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MZ766866074-M-201-2-5_w0_230Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,172V,178T,180D,185R,187D,198G,201S,203R,208G,210S,225S
MZ766698074-M-201-2-5_w0_232Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MZ766868074-M-201-2-5_w0_233Botswanagenomic DNAsubtype: C12216L,27I,36I,41T,71D,83L,98D,116A,124V,128D,148V,169F,178T,180D,187D,203R,208G,208G_VRYPLTFGWCFKLVPVDPREVEEDNEGENNCLLHPMSLHGMEDEHKEVLKWKFDSSLARRHMARELHPEYYKDC*HSWDFPDC*HKWDFPLGRSRRSGLGGTGEWPTLR,210A,211Y,212K,213Q,214L,215L,216F,219T,221S
MZ766699074-M-201-2-5_w0_234Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MZ766708074-P-201-1-4_w0_235Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MZ766709074-P-201-1-4_w0_236Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MZ766710074-P-201-1-4_w0_237Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MZ766711074-P-201-1-4_w0_238Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MZ766712074-P-201-1-4_w0_239Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MZ766713074-P-201-1-4_w0_240Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MZ766714074-P-201-1-4_w0_241Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MZ766715074-P-201-1-4_w0_242Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MZ766716074-P-201-1-4_w0_243Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MZ766717074-P-201-1-4_w0_244Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,222E,225S
MZ766718074-P-201-1-4_w0_245Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MZ766719074-P-201-1-4_w0_246Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MZ766720074-P-201-1-4_w0_247Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MZ766721074-P-201-1-4_w0_248Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MZ766722074-P-201-1-4_w0_249Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MZ766876074-P-201-1-4_w0_250Botswanagenomic DNAsubtype: C12316L,27I,36I,41T,71D,83L,96L,116A,120T,124V,128D,148V,169F,178T,180D,187D,203R,208G,210S,225S
MZ766869074-PP-202-1-0_w0_251Botswanagenomic DNAsubtype: C12314T,6L,27I,41T,71D,96I,116T,128D,148V,154K,169F,178T,180D,203R,208G,210S
MZ766700074-PP-202-1-0_w0_253Botswanagenomic DNAsubtype: C12314T,6L,27I,41T,71D,96I,116T,128D,148V,154K,169F,178T,180D,203R,208G,210S
MZ766872074-PP-202-1-0_w0_255Botswanagenomic DNAsubtype: C12314T,6L,27I,41T,71D,96I,116T,128D,148V,154K,169F,178T,180D,203R,208G,210S
MZ766874074-PP-202-1-0_w0_257Botswanagenomic DNAsubtype: C12314T,6L,27I,41T,71D,96I,116T,128D,148V,154K,169F,178T,180D,203R,208G,210S
MZ766701074-PP-202-1-0_w0_259Botswanagenomic DNAsubtype: C12314T,6L,27I,41T,71D,96I,116T,128D,148V,154K,169F,178T,180D,203R,208G,210S,225S
MZ766702074-PP-202-1-0_w0_260Botswanagenomic DNAsubtype: C12314T,6L,27I,41T,71D,96I,116T,128D,148V,154K,169F,178T,180D,203R,208G,210S
MZ766703074-PP-202-1-0_w0_261Botswanagenomic DNAsubtype: C12314T,6L,27I,41T,71D,96I,116T,128D,148V,154K,169F,178T,180D,203R,208G,210S
MZ766704074-PP-202-1-0_w0_262Botswanagenomic DNAsubtype: C12314T,6L,27I,41T,71D,96I,116T,128D,148V,154K,169F,178T,180D,203R,208G,210S
MZ766705074-PP-202-1-0_w0_263Botswanagenomic DNAsubtype: C12314T,6L,27I,41T,71D,96I,116T,128D,148V,154K,169F,178T,180D,203R,208G,210S
MZ766706074-PP-202-1-0_w0_264Botswanagenomic DNAsubtype: C12314T,6L,27I,41T,71D,96I,116T,128D,148V,154K,169F,178T,180D,203R,208G,210S
MZ766707074-PP-202-1-0_w0_265Botswanagenomic DNAsubtype: C12314T,6L,27I,41T,71D,96I,116T,128D,148V,154K,169F,178T,180D,203R,208G,210S
MZ766723AP-123_w0_266Botswanagenomic DNAsubtype: C12316L,27I,71D,83L,87Q,91V,116A,120H,128D,148V,154K,169F,177S,187D,207S,208G
MZ766877AP-125_w0_267Botswanagenomic DNAsubtype: C12316L,15L,23*,31S,33N,50S,59I,71D,80*,83L,87Q,91V,98D,100K,106R,120S,124M,128D,133*,137R,148V,154K,169F,178T,180D,184*,187D,203R,206R,208E,229K
MZ766724AP-125_w0_268Botswanagenomic DNAsubtype: C12316L,15L,31G,33N,50S,59I,71D,83L,87Q,91V,98D,120S,124M,128D,137E,148V,154K,169F,178T,180D,187D,203R,208G
MZ766725AP-126_w0_269Botswanagenomic DNAsubtype: C12316L,15L,27I,41T,71D,91V,110N,116A,120G,124V,148V,154K,169F,178T,180D,203R,208G,225S
MZ766726AP-126_w0_270Botswanagenomic DNAsubtype: C12316L,15L,27I,41T,71D,91V,110N,116A,120G,124V,148V,154K,169F,178T,180D,203R,208G,225S
MZ766878AP-132_w0_271Botswanagenomic DNAsubtype: C12316L,23*,27I,41T,60E,71D,75K,80*,83M,89R,116A,117*,120S,124V,148V,156R,169F,178T,180D,184*,208E,210S,222R,225S
MZ766879AP-132_w0_272Botswanagenomic DNAsubtype: C12316L,27I,28K,29K,41T,71N,83M,116A,120S,124V,148V,167Q,169F,175K,178T,180D,184*,199R,208G,210S,213K,214I,222E,225S
MZ766880AP-132_w0_273Botswanagenomic DNAsubtype: C12316L,8R,10I,23*,27I,41T,60R,61R,71D,75K,80*,82K,83M,116A,117*,120S,124V,132K,133*,137E,144I,148V,156R,167Q,169F,178T,180D,184*,206R,208E,210S,222R,225S
MZ766881AP-132_w0_274Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83M,116A,120S,124V,148V,169F,178T,180D,199R,208G,210S,225S
MZ766727AP-132_w0_275Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83M,116A,120S,124V,148V,169F,178T,180D,199R,208G,210S,225S
MZ766882AP-132_w0_276Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83M,116A,120S,124V,148V,169F,178T,180D,199R,208G,210S,225S
MZ766728AP-132_w0_277Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83M,116A,120S,124V,148V,169F,178T,180D,199R,208G,210S,225S
MZ766729AP-132_w0_278Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83M,116A,120S,124V,148V,169F,178T,180D,199R,208G,210S,225S
MZ766883AP-132_w0_279Botswanagenomic DNAsubtype: C12316L,23*,27I,41T,60E,66I,71D,80*,83M,116A,117*,120S,124V,148V,156R,167Q,169F,178T,180D,184*,206R,208E,210S,222E,225S
MZ766884AP-132_w0_280Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83M,116A,120S,124V,148V,169F,178T,180D,199R,208G,210S,225S
MZ766730AP-132_w0_281Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83M,116A,120S,124V,148V,169F,178T,180D,199R,208G,210S,225S
MZ766885AP-132_w0_282Botswanagenomic DNAsubtype: C12316L,23*,27I,41T,60R,71D,80*,83M,100K,116A,117*,120S,124V,148V,156R,167Q,169F,178T,180D,184*,199R,206R,208K,210S,225S
MZ766886AP-132_w0_283Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,83M,116A,120S,124V,148V,169F,178T,180D,199R,208G,210S,225S
MZ766887AP-132_w0_284Botswanagenomic DNAsubtype: C12316L,27I,41T,71D,80*,83M,116A,120S,124V,148V,169F,178T,180D,199R,208G,210S,222R,225S
MZ766888AP-132_w84_285Botswanagenomic DNAsubtype: C12316L,23*,27I,41T,71D,80*,83M,100K,116A,117*,124V,137E,148V,156R,169F,178T,180D,184*,199R,208G,210S,222R,225S
MZ766889AP-135_w0_286Botswanagenomic DNAsubtype: C12316L,14S,15L,23*,27I,41T,50T,71N,80*,92P,116A,120S,124V,128D,133*,148V,154K,166D_VL*NFKS*TSYTRCKKLDDRNLA*VKVIEEKAFSPEVIPMFTALSEGATPTDLNTMLNTVGGHQAAMQMLKNTINEEAAE*DRVHPVHAGPIPPGQMREPRGSDIAGTTSTLQEQIAWMTSNPPVPVGDIYKR*IILGLNKIVRMYSPVSILDIKQGPKEPFRDYVD,169F,178T,180D,203R,208G,210S
MZ766731AP-135_w0_287Botswanagenomic DNAsubtype: C12316L,14S,15L,27I,41T,50T,71D,92P,116A,120S,124V,128D,148V,154K,169F,178T,180D,203R,208G,210S
MZ766732AP-135_w0_288Botswanagenomic DNAsubtype: C12316L,14S,15L,27I,41T,50T,71D,92P,116A,120S,124V,128D,148V,154K,169F,178T,180D,203R,208G,210S
MZ766733AP-135_w0_289Botswanagenomic DNAsubtype: C12316L,14S,15L,27I,41T,50T,71D,92P,116A,120S,124V,128D,148V,154K,169F,178T,180D,203R,208G,210S
MZ766890AP-135_w0_290Botswanagenomic DNAsubtype: C12316L,8R,14S,15L,23*,27I,41T,50T,60R,71D,80*,92P,116A,117*,120S,124V,128D,133*,148V,154K,169F,178T,180D,184*,203R,206R,208E,210S,212K,220R,222R,223R,225S
MZ766734AP-135_w0_291Botswanagenomic DNAsubtype: C12316L,14S,15L,27I,41T,50T,71D,92P,116A,120S,124V,128D,148V,154K,169F,178T,180D,203R,208G,210S
MZ766891AP-135_w0_292Botswanagenomic DNAsubtype: C12316L,14S,15L,27I,41T,50T,71D,92P,116A,120S,124V,128D,148V,154K,169F,178T,180D,203R,208G,210S
MZ766735AP-135_w0_293Botswanagenomic DNAsubtype: C12316L,14S,15L,27I,41T,50T,71D,92P,116A,120S,124V,128D,148V,154K,169F,178T,180D,203R,208G,210S
MZ766736AP-135_w0_294Botswanagenomic DNAsubtype: C12316L,14S,15L,27I,41T,50T,71D,92P,116A,120S,124V,128D,148V,154K,169F,178T,180D,203R,208G,210S
MZ766737AP-135_w0_295Botswanagenomic DNAsubtype: C12316L,14S,15L,27I,41T,50T,71D,92P,116A,120S,124V,128D,148V,154K,169F,178T,180D,203R,208G,210S
MZ766892AP-135_w0_296Botswanagenomic DNAsubtype: C12316L,14S,15L,27I,41T,50T,71D,92P,116A,120S,124V,128D,148V,154K,169F,178T,180D,203R,208G,210S
MZ766893AP-135_w0_297Botswanagenomic DNAsubtype: C12316L,14S,15L,27I,41T,50T,71D,92P,116A,120S,124V,128D,148V,154K,169F,178T,180D,203R,208G,210S
MZ766894AP-135_w0_298Botswanagenomic DNAsubtype: C12316L,14S,15L,27I,41T,50T,71D,92P,116A,120S,124V,128D,148V,154K,169F,178T,180D,203R,208G,210S
MZ766738AP-135_w0_299Botswanagenomic DNAsubtype: C12316L,14S,15L,27I,41T,50T,71D,92P,116A,120S,124V,128D,148V,154K,169F,178T,180D,203R,208G,210S
MZ766895AP-135_w0_300Botswanagenomic DNAsubtype: C12316L,14S,15L,27I,41T,50T,71D,92P,116A,120S,124V,128D,148V,154K,169F,178T,180D,203R,208G,210S
MZ766739AP-135_w0_301Botswanagenomic DNAsubtype: C12316L,14S,15L,27I,41T,50T,71D,92P,116A,120S,124V,128D,148V,154K,169F,178T,180D,203R,208G,210S
MZ766740AP-136_w0_302Botswanagenomic DNAsubtype: C12316L,15L,27I,40C,41T,50A,71D,83L,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,225S
MZ766896AP-139_w0_303Botswanagenomic DNAsubtype: C12316F,14P,15L,16T,41T,71D,83I,115V,116A,120A,124V,148V,169F,177S,187D,208G,210S,225S
MZ766741AP-139_w0_305Botswanagenomic DNAsubtype: C12316F,14P,15L,16T,41T,71D,83I,115V,116A,120A,124V,148V,169F,177S,187D,208G,210S,225S
MZ766742AP-139_w0_306Botswanagenomic DNAsubtype: C12316F,14P,15L,16T,41T,71D,83I,115V,116A,120A,124V,148V,169F,177S,187D,208G,210S,225S
MZ766743AP-139_w0_307Botswanagenomic DNAsubtype: C12316F,14P,15L,16T,41T,71D,83I,115V,116A,120A,124V,148V,169F,177S,187D,208G,210S,225S
MZ766744AP-139_w0_308Botswanagenomic DNAsubtype: C12316F,14P,15L,16T,41T,71D,83I,115V,116A,120A,124V,148V,169F,177S,187D,208G,210S,225S
MZ766898AP-139_w0_309Botswanagenomic DNAsubtype: C12316F,14P,15L,16T,41T,71D,83I,115V,116A,120A,124V,148V,169F,177S,187D,208G,210S,225S
MZ766899AP-139_w0_310Botswanagenomic DNAsubtype: C12316F,14P,15L,16T,41T,71D,83I,108N,115V,116A,120A,124V,148V,169F,177S,187D,208G,210S,225S
MZ766745AP-139_w0_311Botswanagenomic DNAsubtype: C12316F,14P,15L,16T,26I,41T,71D,83I,115V,116A,120A,124V,148V,169F,177S,187D,208G,210S,225S
MZ766900AP-139_w0_312Botswanagenomic DNAsubtype: C12316F,14P,15L,16T,41T,71D,83I,115V,116A,120A,124V,148V,169F,177S,187D,208G,210S,225S
MZ766901AP-139_w0_313Botswanagenomic DNAsubtype: C12316F,14P,15L,16T,41T,71D,83I,115V,116A,120A,124V,148V,169F,177S,187D,208G,210S,225S
MZ766746AP-139_w0_314Botswanagenomic DNAsubtype: C12316F,14P,15L,16T,41T,71D,83I,115V,116A,120A,124V,148V,169F,177S,187D,208G,210S,225S
MZ766747AP-139_w84_315Botswanagenomic DNAsubtype: C12316F,14P,15L,16T,41T,71D,83I,115V,116A,120A,124V,148V,169F,177S,187D,208G,210S,225S
MZ766902AP-139_w84_316Botswanagenomic DNAsubtype: C12316F,8R,14P,15L,16T,23*,41T,71D,80*,83I,115V,116A,117*,120A,124V,148V,169F,177S,187D,208E,210S,213K,220R,223R,225S
MZ766903AP-139_w84_317Botswanagenomic DNAsubtype: C12316F,14P,15L,16T,41T,71D,83I,115V,116A,120A,124V,148V,169F,177S,187D,208G,210S,225S
MZ766904AP-140_w0_318Botswanagenomic DNAsubtype: C12312V,6L,14S,15L,23*,31G,33N,36I,41A,71D,80*,83L,91V,116A,117*,120S,124V,128D,148V,154K,156R,169F,178T,180D,187D,203R,208R
MZ766748AP-140_w0_319Botswanagenomic DNAsubtype: C12312V,6L,14S,15L,31G,33N,36I,41A,71D,83L,91V,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MZ766905AP-140_w0_320Botswanagenomic DNAsubtype: C12312V,6L,14S,15L,23*,31G,33N,36I,41A,46R,60R,71D,80*,82K,83L,91V,116A,117*,120S,124V,128D,137R,148V,154K,156R,167Q,169F,178T,180D,184*,187D,203R,208G
MZ766906AP-140_w0_321Botswanagenomic DNAsubtype: C12312V,6L,14S,15L,31G,33N,36I,41A,71D,83L,91V,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MZ766749AP-140_w0_322Botswanagenomic DNAsubtype: C12312V,6L,14S,15L,31G,33N,36I,41A,71D,83L,91V,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MZ766907AP-140_w0_323Botswanagenomic DNAsubtype: C12312V,6L,10I,14S,15L,23*,31S,33N,36I,41A,60E,71D,80*,82K,83L,91V,116A,117*,120S,124V,127R,128D,133*,137R,148V,154K,167Q,169F,178T,180D,184*,187D,203R,208E,223R
MZ766908AP-140_w0_324Botswanagenomic DNAsubtype: C12312V,6L,14S,15L,31G,33N,36I,41A,71D,83L,91V,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MZ766909AP-140_w0_325Botswanagenomic DNAsubtype: C12312V,6L,14S,15L,23*,31S,33N,36I,41A,71D,80*,83L,91V,116A,117*,120S,124V,128D,137K,148V,154K,169F,178T,180D,184*,187D,203R,208E,220R
MZ766910AP-140_w0_326Botswanagenomic DNAsubtype: C12312V,6L,8R,14S,15L,23*,31G,33N,36I,41A,71D,80*,83L,91V,116A,120S,124V,128D,137R,148V,154K,169F,178T,180D,184*,187D,203R,206R,208G,220R
MZ766911AP-140_w0_327Botswanagenomic DNAsubtype: C12312V,6L,14S,15L,31G,33N,36I,41A,71D,83L,91V,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MZ766750AP-140_w0_328Botswanagenomic DNAsubtype: C12312V,6L,14S,15L,31G,33N,36I,41A,71D,83L,91V,101E,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MZ766912AP-140_w0_329Botswanagenomic DNAsubtype: C12312V,6L,14S,15L,23*,31G,33N,36I,41A,60R,71D,80*,82K,83L,91V,101R,116A,120S,124V,128D,133*,137E,148V,154K,156R,169F,173K,178T,180D,184*,187D,203R,206R,208E,229K
MZ766913AP-140_w0_330Botswanagenomic DNAsubtype: C12312V,6L,14S,15L,31G,33N,36I,41A,71D,83L,91V,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MZ766914AP-140_w0_331Botswanagenomic DNAsubtype: C12312V,6L,14S,15L,31G,33N,36I,41A,71D,80*,83L,91V,116A,120S,124V,128D,132K,148V,154K,169F,178T,180D,187D,203R,208G
MZ766915AP-140_w0_332Botswanagenomic DNAsubtype: C12312V,6L,14S,15L,23*,31G,33N,36I,41A,60R,71D,80*,83L,91V,101R,116A,117*,120S,124V,128D,137R,148V,154K,169F,178T,180D,184*,187D,203R,208E
MZ766916AP-140_w0_333Botswanagenomic DNAsubtype: C12312V,6L,14S,15L,23*,31G,33N,36I,41A,71D,80*,82K,83L,91V,116A,120S,124V,128D,133*,148V,154K,169F,178T,180D,184*,187D,203R,206R,208E,222R,225S,229K
MZ766751AP-140_w0_334Botswanagenomic DNAsubtype: C12312V,6L,14S,15L,31G,33N,36I,41A,71D,83L,91V,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MZ766752AP-140_w0_335Botswanagenomic DNAsubtype: C12312V,6L,14S,15L,31G,33N,36I,41A,71D,83L,91V,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MZ766917AP-140_w84_336Botswanagenomic DNAsubtype: C12312V,6L,8R,10I,14S,15L,23*,31G,33N,36I,41A,71D,80*,82K,83L,91V,100K,116A,120S,124V,128D,133*,137R,148V,154K,156R,169F,178T,180D,184*,187D,203R,206R,208E,220R
MZ766918AP-140_w84_337Botswanagenomic DNAsubtype: C12312V,6L,14S,15L,23*,31G,33N,36I,41A,71D,83L,91V,116A,117*,120S,124V,128D,133*,137R,148V,154K,169F,178T,180D,184*,187D,203R,208G
MZ766919AP-140_w84_338Botswanagenomic DNAsubtype: C12312V,6L,14S,15L,31G,33N,36I,41A,71D,83L,91V,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
MZ766920AP-140_w84_339Botswanagenomic DNAsubtype: C12312V,6L,14S,15L,23*,31G,33N,36I,41A,60R,71D,80*,82K,83L,91V,116A,117*,120S,124V,128D,137R,148V,154K,169F,178T,180D,184*,187D,203R,208E,223R
MZ766921AP-140_w84_340Botswanagenomic DNAsubtype: C12312V,6L,8R,14S,15L,23*,31S,33N,35K,36I,41A,60K,71D,80*,83L,91V,100K,101R,106E,116A,117*,120S,124V,127R,128D,133*,137R,148V,154K,156R,162K,167Q,169F,178T,180D,184*,187D,203R,206K,208E,223R
MZ766922AP-140_w84_341Botswanagenomic DNAsubtype: C12312V,6L,10I,14S,15L,18K,23*,29K,31S,33N,36I,41A,60R,71N,80*,83L,91V,100K,116A,117*,120S,124V,127K,128D,133*,137R,148V,152N,154K,156R,159K,169F,178T,180D,181M,184*,187D,203R,208E,223E

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