<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Joseph (2022) Deep Sequencing Analysis of HIV-1 Proviruses Reveals Frequent Asymmetric Long-Terminal Repeats And Other Novel Proviral Structures Unpublished 6.91e-167 85          

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
MZ868394ACH2_Provirus_1USAgenomic DNAsubtype: HXB2123110V
MZ868395ACH2_Provirus_2USAgenomic DNAsubtype: HXB2123110V
MZ868397C-02_13USAgenomic DNAsubtype: B12316L,83L
MZ868398C-02_21USAgenomic DNAsubtype: B12316L,75K,79K,83L,133*,137E,213K
MZ868399C-02_29USAgenomic DNAsubtype: B12316L,83L
MZ868400C-02_32USAgenomic DNAsubtype: B12316L,83L
MZ868401C-02_38USAgenomic DNAsubtype: B12316L,80*,83L,133*,154K,178T
MZ868402C-02_40USAgenomic DNAsubtype: B12316L,23*,60R,80*,89R,116R,117*,133*,137R,156R,184*,225S,229K
MZ868403C-02_44USAgenomic DNAsubtype: B12316L
MZ868404C-02_45USAgenomic DNAsubtype: B12316L,83L
MZ868405C-02_48USAgenomic DNAsubtype: B12316L,83L
MZ868406C-02_5USAgenomic DNAsubtype: B12316L
MZ868407C-02_52USAgenomic DNAsubtype: B12316L,81N,97K,100K,116E,118I,127E,133*,137E,154K,159K,162K,163N,166N,184*,214I
MZ868408C-02_53USAgenomic DNAsubtype: B12316L,83L
MZ868409C-02_55USAgenomic DNAsubtype: B12314L,6L,83L
MZ868410C-02_7USAgenomic DNAsubtype: B12316L
MZ868411C-02_HFH_29USAgenomic DNAsubtype: B12316L,83L
MZ868413C-03_1USAgenomic DNAsubtype: B12316L,27I,75D,83M,86P,87Q,96I,116T,123A,148V,194S,208G
MZ868414C-03_10USAgenomic DNAsubtype: B12316L,27I,75D,83M,86P,87Q,96I,116T,123A,148V,194S,208G
MZ868415C-03_11USAgenomic DNAsubtype: B12316L,23*,27I,75D,83M,86P,87Q,89R,96I,116T,123A,148V,194S,206R,208E
MZ868416C-03_13USAgenomic DNAsubtype: B12316L,27I,75D,83M,86P,87Q,96I,116T,123A,148V,194S,208G
MZ868417C-03_14USAgenomic DNAsubtype: B12316L,27I,75D,83M,86P,87Q,96I,116T,123A,148V,194S,208G
MZ868418C-03_15USAgenomic DNAsubtype: B12316L,27I,75D,83M,86P,87Q,96I,116T,123A,148V,194S,208G
MZ868420C-03_17USAgenomic DNAsubtype: B12316L,27I,75D,83M,86P,87Q,96I,116T,123A,148V,194S,208G
MZ868421C-03_20USAgenomic DNAsubtype: B12316L,27I,75D,83M,86P,87Q,96I,116T,123A,148V,194S,208G
MZ868422C-03_22USAgenomic DNAsubtype: B12316L,27I,83L,148V
MZ868423C-03_27USAgenomic DNAsubtype: B12316L,27I,75D,83M,86P,87Q,96I,116T,123A,148V,194S,208G
MZ868424C-03_29USAgenomic DNAsubtype: B12316L,27I,83M,123A,148V,194S
MZ868491C-03_87USAgenomic DNAsubtype: B12316L,27I,75D,83M,86P,87Q,96I,116T,123A,148V,194S,208G
MZ868425C-03_9USAgenomic DNAsubtype: B12316L,27I,83M,123A,148V,194S
MZ868428C-03_HFH_87USAgenomic DNAsubtype: B12316L,27I,75D,83M,86P,87Q,96I,116T,123A,148V,194S,208G
MZ868492F-07_101USAgenomic DNAsubtype: B12316L,44A,83L,148V,180D
MZ868429F-07_11USAgenomic DNAsubtype: B12316L,83L,148I,180D,230I
MZ868430F-07_12USAgenomic DNAsubtype: B12316L,23*,44A,80*,83L,100K,116R,117*,148V,180D,184*,213K,229K
MZ868431F-07_14USAgenomic DNAsubtype: B12316L,83L,180D
MZ868432F-07_15USAgenomic DNAsubtype: B12316L,83L,180D
MZ868433F-07_19USAgenomic DNAsubtype: B12316L,83L,148I,180D,230I
MZ868434F-07_2USAgenomic DNAsubtype: B12316L,83L,98K,127E,128K,148I,180D,230I
MZ868435F-07_21USAgenomic DNAsubtype: B12316L,83L,148V,180D,230I
MZ868436F-07_27USAgenomic DNAsubtype: B12316L,83L,180D
MZ868437F-07_28USAgenomic DNAsubtype: B12316L,83L,180D
MZ868438F-07_3USAgenomic DNAsubtype: B12316L,23*,80*,83L,101R,106R,116R,133*,137R,156R,167Q,180D,184*,223R,229K
MZ868440F-07_33USAgenomic DNAsubtype: B12316L,83L,148V,180D
MZ868441F-07_35USAgenomic DNAsubtype: B12316L,23*,83L,148V,180D,230I
MZ868442F-07_37USAgenomic DNAsubtype: B12316L,10I,23*,60R,61R,80*,83L,89R,96I,100K,101R,116R,117*,133*,148V,156R,180D,184*,220R,222R,230I
MZ868443F-07_38USAgenomic DNAsubtype: B12316L,44A,83L,148V,180D
MZ868444F-07_49USAgenomic DNAsubtype: B12316L,83L,148V,180D,204V
MZ868445F-07_50USAgenomic DNAsubtype: B12316L,83L,180D
MZ868446F-07_51USAgenomic DNAsubtype: B12316L,44A,83L,148V,180D
MZ868447F-07_52USAgenomic DNAsubtype: B12316L,44A,83L,148V,180D,230I
MZ868448F-07_54USAgenomic DNAsubtype: B12316L,44A,83L,148V,180D
MZ868493F-07_62USAgenomic DNAsubtype: B12316L,83L,148I,180D
MZ868449F-07_63USAgenomic DNAsubtype: B12316L,10I,23*,46R,80*,83L,117*,148V,156R,180D,184*,229K,230I
MZ868450F-07_67USAgenomic DNAsubtype: B12316L,83L,180D
MZ868451F-07_7USAgenomic DNAsubtype: B12316L,44A,83L,148V,180D,230I
MZ868452F-07_72USAgenomic DNAsubtype: B12316L,83L,180D,230I
MZ868453F-07_74USAgenomic DNAsubtype: B12316L,8R,23*,80*,83L,100K,101R,106R,117*,162K,165I,180D,220R,229K
MZ868454F-07_75USAgenomic DNAsubtype: B12316L,83L,148V,180D,216S,225S,230I
MZ868456F-07_81USAgenomic DNAsubtype: B12316L,44A,83L,148I,180D,230I
MZ868457F-07_86USAgenomic DNAsubtype: B12316L,83L,148V,180D
MZ868458F-07_88USAgenomic DNAsubtype: B12316L,83L,148V,180D,216S,225S,230I
MZ868494F-07_9USAgenomic DNAsubtype: B12316L,83L,148I,180D
MZ868459F-07_90USAgenomic DNAsubtype: B12316L,83L,180D
MZ868460F-07_HFH_101USAgenomic DNAsubtype: B12316L,44A,83L,148V,180D
MZ868461K-01_1USAgenomic DNAsubtype: B12316L,15L,23*,80*,83L,91V,96I,98D,117*,127R,143K,154K,156R,170R,184*,194S,208G,225S
MZ868462K-01_10USAgenomic DNAsubtype: B12316L,15L,83L,91V,98D,154K,170R,194S,208G,225S
MZ868463K-01_11USAgenomic DNAsubtype: B12316L,15L,83L,91V,98D,154K,170R,194S,208G,225S
MZ868464K-01_22USAgenomic DNAsubtype: B12316L,8R,10I,15L,23*,33N,80*,83L,91V,116R,117*,120S,127E,132K,133*,137R,143K,154K,156R,170R,184*,194S,206R,208G,222R,223R,225S
MZ868465K-01_24USAgenomic DNAsubtype: B12316L,15L,23*,33N,55I,66I,80*,83L,91V,97K,106R,116R,117*,118I,120S,127E,128K,133*,137R,154K,156R,162K,170R,184*,187K,194S,206R,208G,220R,222K,223R,225S
MZ868466K-01_25USAgenomic DNAsubtype: B12316L,15L,33N,83L,91V,120S,154K,194S,208G,225S
MZ868467K-01_27USAgenomic DNAsubtype: B12316L,15L,33N,83L,91V,98D,120S,154K,170R,194S,208G,225S
MZ868468K-01_30USAgenomic DNAsubtype: B12316L,15L,23*,60R,61R,71K,80*,83L,91V,98D,116R,117*,154K,162K,170R,184*,194S,206R,208G,225S
MZ868469K-01_37USAgenomic DNAsubtype: B12316L,15L,23*,33N,83L,91V,100K,117*,120S,154K,194S,208G,225S
MZ868470K-01_39USAgenomic DNAsubtype: B12316L,15L,23*,33N,80*,81N,83L,86I,91V,120S,154K,156R,170R,184*,194S,208G,225S
MZ868471K-01_40USAgenomic DNAsubtype: B12316L,15L,83L,91V,98D,154K,170R,194S,208G,225S
MZ868473K-01_7USAgenomic DNAsubtype: B12316L,15L,23*,33N,80*,81N,83L,86I,91V,120S,154K,156R,170R,184*,194S,208G,225S
MZ868474K-01_8USAgenomic DNAsubtype: B12316L,15L,33N,83L,91V,98D,120S,154K,170R,194S,208G,225S
MZ868476R-09_1USAgenomic DNAsubtype: B12316L,14P,83L,91V
MZ868477R-09_16USAgenomic DNAsubtype: B12316L,83L
MZ868495R-09_22USAgenomic DNAsubtype: B12316L,83L,91V,136M,194S,208G
MZ868480R-09_24USAgenomic DNAsubtype: B12316L,83L,162K,208G
MZ868481R-09_26USAgenomic DNAsubtype: B12316L,83L,162K,208G
MZ868484R-09_7USAgenomic DNAsubtype: B12316L,83L
MZ868485R-09_8USAgenomic DNAsubtype: B12316L,83L
MZ868487R-09_HFH_22USAgenomic DNAsubtype: B12316L,83L,91V,136M,194S,208G

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