<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Kousiappa (2011) Molecular Characterization of HIV Type 1 Strains from Newly Diagnosed Patients in Cyprus (2007-2009) Recovers Multiple Clades Including Unique Recombinant Strains and Lack of Transmitted Drug Resistance AIDS Res. Hum. Retroviruses 27 (11), 1183-1199 (20 2.69e-155 74 74 Naive Plasma; PBMC Direct PCR Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
JF683736CY181Cyprus2007genomic DNA12313M,4A,6P,7P,13P,14G,15L,16L,18K,22G,26I,27I,28K,37V,40V,41A,42G,43V,47G,53K,54A,64V,67E,83L,91V,120H,132K,136M,148V,180D,225S
JF683737CY182Cyprus2007genomic DNA12312P,3Q,4E,6F,7*,9G,10K,11K,12K,14S,15F,19D,21K,22G,23R,24G,26G,27T,28P,35G,37V,40V,53D,54A,58V,71D,83L,92P,111P,115V,116Q,120G,128D,148V,169F,171V,178T,183G,200S,207T,208G
JF683738CY184Cyprus2007genomic DNA12316L,75D,83L,180D
JF683739CY185Cyprus2007genomic DNA12316A,10I,14S,15L,27I,31G,33N,54M,58I,71D,83L,87Q,92P,110N,116A,120S,124V,128D,148V,169F,178T,187A,203R,208G
JF683740CY187Cyprus2007genomic DNA12313I,6L,18T,27I,36I,41T,71D,83L,86A,87Q,91V,96I,115V,116T,120S,128D,148V,154K,169F,178T,187D,203R,208G,210S
JF683741CY188Cyprus2007genomic DNA123114P,28K,83L,91V,154K,178T,194S
JF683742CY189Cyprus2007genomic DNA12312M,3G,4N,5I,6L,7G,9K,13P,15L,19F,21D,22W,24K,27E,37V,41T,42G,83L,91V,120S,123A,148S,154K,180D
JF683743CY190Cyprus2007genomic DNA12316L,27I,36I,83L,91V,123A,148V
JF683744CY191Cyprus2007genomic DNA2923141T,54M,58I,71D,83A,92P,116Q,120S,124V,148V,169F,178T,187D,208G,209P,225S
JF683745CY192Cyprus2007genomic DNA12316A,14N,15L,27I,41T,54M,58I,71D,92P,120S,128D,148V,169F,171A,178T,180D,200S,207A,208G
JF683746CY194Cyprus2007genomic DNA12316L,27I,35G,36I,37V,54A,83L,91V,123A,148V
JF683747CY195Cyprus2007genomic DNA12316L,14P,27I,41T,83L,91V,116A,120G,124V,148V,180D,208G
JF683748CY196Cyprus2007genomic DNA12316A,11T,15L,41T,54M,58I,71D,92P,120S,128D,148V,169F,171A,178T,180D,200S,207A,208G
JF683749CY197Cyprus2007genomic DNA12316L,15L,27I,83L,86P,87Q,148V,213D,222R
JF683750CY198Cyprus2007genomic DNA12316L,15L,27I,71D,83L,120H,136M,148V,149G,154K,225S
JF683751CY199Cyprus2007genomic DNA12316L,15L,83L,116A,120S,123S,180D,205M,208G
JF683752CY200Cyprus2007genomic DNA12316A,14S,15M,27I,41T,54M,58I,71D,83T,91V,98D,135V,139H,141L,148V,154K,169F,178T,180D,203R,204G,208G,225S
JF683753CY201Cyprus2007genomic DNA12316L,14P,15L,83L,180D,225S,230I
JF683754CY202Cyprus2007genomic DNA12316L,14P,41T,83L,91A,120S,180D,194S,208G,213D,225S,230I
JF683755CY203Cyprus2007genomic DNA12316L,7P,14P,15M,17A,41T,50S,54G,68I,71D,83L,91V,116S,120G,135V,148V,169F,178T,180D,187D,203R,208G,210S
JF683756CY204Cyprus2007genomic DNA12316L,15L,83L,136M,148S,180D,225A
JF683757CY205Cyprus2007genomic DNA2923141T,75D,83L,91V,96L,116A,124V,128D,148V,154K,169F,177S,187D,205M,208G
JF683758CY206Cyprus2007genomic DNA12316A,14S,15M,27I,41T,54M,58I,71D,92P,120S,124T,135V,148V,169F,178T,180D,200H,208G,225S
JF683759CY207Cyprus2007genomic DNA12316A,11I,14T,15L,27I,31G,50P,58I,63P,71D,83L,92P,96L,111P,115V,116Q,120G,121T,128D,148V,169F,178T,183G,200S,207T,208G
JF683760CY208Cyprus2007genomic DNA12316A,11I,14N,15L,27I,54V,58I,71D,83L,86P,92P,96I,105T,106W,111P,115L,116L,117L,120G,128D,131S,148V,154K,169F,171A,178T,183G,200S,207S,208G,210S
JF683761CY209Cyprus2007genomic DNA12316A,11I,14N,15L,27I,54V,58I,71D,83L,86P,92P,96I,105T,111P,115L,116L,120G,121T,128D,131Y,148V,154K,169F,171A,178T,183G,200S,207S,208G
JF683762CY212Cyprus2007genomic DNA123115L,71D,83L,92P,116Q,120S,124V,148V,154K,169F,178T,183G,207T,208G,225S
JF683763CY213Cyprus2007genomic DNA12316A,11I,14S,15M,27I,54M,58I,71D,83L,86A,87Q,91F,92P,120S,128D,148V,169F,178T,200A,203R,208G,212Q,220A
JF683764CY214Cyprus2007genomic DNA12316L,15L,83L,86A,87Q,91V,92Q,98D,120H,148V,180D
JF683765CY216Cyprus2007genomic DNA12316L
JF683766CY217Cyprus2008genomic DNA12313M,6A,11T,12Y,14S,15L,16T,27I,31G,33N,41T,54M,58I,71D,83I,91N,92P,96V,105T,116L,120T,131H,148V,169F,178T,200S,207T,208G,210S
JF683767CY218Cyprus2008genomic DNA12316A,14P,15M,27I,54M,58I,71D,79D,83L,111P,116A,120G,128D,148V,154K,169F,178T,183G,191I,200S,203R,207A,208G,225S,230I
JF683768CY219Cyprus2008genomic DNA12316L,14S,27I,41T,71D,83L,116A,120S,124V,128D,148V,169F,178T,180D,203R,208G
JF683769CY220Cyprus2008genomic DNA12316L,15L,27I,83L,91V,96I,116T,136M,148V,180D,225S
JF683770CY221Cyprus2008genomic DNA12313L,4H,6L,11G,14S,15L,18I,27I,28K,41T,71D,75D,83L,100M,105T,106R,116A,120S,124V,132T,141L,148V,151W,154K,169F,171V,178T,180D,203R,225A
JF683771CY222Cyprus2008genomic DNA12316L,14S,27I,71D,79D,83L,92P,116Q,120S,124V,128D,148V,154K,169F,178T,183G,187D,208G,230I
JF683772CY223Cyprus2008genomic DNA12316A,14S,15M,31G,54M,58I,75D,83L,91V,115V,120S,128D,148V,149G,154K,169F,178T,187D,203R,208G,225S
JF683773CY224Cyprus2008genomic DNA12316L,14G,27I,83L,148V,194S,230I
JF683774CY225Cyprus2008genomic DNA12313E,6L,11D,12L,15L,18K,19P,21I,27E,28K,41T,91V,148S,154K,180D,208G,225A
JF683775CY226Cyprus2008genomic DNA12316L,14P,79D,83L,154K,171V,180D,230I
JF683776CY227Cyprus2008genomic DNA12316L,14P,27I,33C,34R,41T,83L,91V,92Q,93S,97K,98Q,99L,100L,105R,106N,107S,109P,116L,117C,120G,129L,132P,137R,138K,148V,154K,169F,178T,183G,187D,200N,208G,210S,225S
JF683777CY228Cyprus2008genomic DNA12313G,6L,14P,27I,32Y,41T,59E,71D,79K,83L,91V,92Q,93A,100M,116A,120G,128D,148V,154K,169F,178T,183G,200N,203R,208G,210S,225S
JF683778CY229Cyprus2008genomic DNA12316L,14P,15M,16T,27I,41T,68I,72V,83L,91V,110N,120S,121T,154K
JF683779CY230Cyprus2008genomic DNA12316A,14N,15L,27I,58V,71D,83L,86A,92P,96I,111P,115L,116Q,120G,128D,148V,154K,169F,171V,187D,194S,200S,208G,225S
JF683780CY231Cyprus2008genomic DNA12316A,11I,14S,15M,27I,54M,58I,71D,83L,86A,87Q,91F,92P,120S,128D,148V,169F,178T,200A,203R,208G
JF683781CY232Cyprus2008genomic DNA12316L,9A,14P,15L,27I,41T,79D,83L,91V,110N,120S,148I,153V,180D
JF683782CY235Cyprus2008genomic DNA12316A,11I,14N,15L,27I,54V,58I,71D,83L,86P,92P,96I,107A,111P,114H,115L,116Q,120S,128D,148Q,154K,169F,171A,178T,187D,200S,207S,208G,210S,225A
JF683783CY236Cyprus2008genomic DNA12316A,11I,14N,15L,27I,54V,58I,71D,83L,86P,92P,96I,111P,115L,116Q,120G,128D,154K,169F,171V,178T,187D,207S,208G,210S,225A
JF683784CY237Cyprus2008genomic DNA12316V,14P,79D,83L,120H,148S,154K,180D
JF683785CY238Cyprus2008genomic DNA12316L,83L
JF683786CY240Cyprus2008genomic DNA12316A,14S,15M,27I,41T,54M,58I,71D,75D,79D,83T,92P,116A,120S,124V,135V,148V,154K,169F,178T,187D,200S,208G,225S
JF683787CY241Cyprus2009genomic DNA12316M,14P,83L,91V,116A,170R,208G,210S
JF683788CY242Cyprus2009genomic DNA12316L,15L,41T,75D,83L,91V,116Q,120S,154K,180D,208G
JF683789CY243Cyprus2009genomic DNA12313E,4A,6G,8V,9L,10L,11I,13L,14N,15L,17T,18L,21C,26E,27K,35K,54V,58I,71D,83L,86P,87Q,92P,96I,107A,111P,115L,116Q,120S,128D,148V,154K,169F,171A,178T,183S,187D,194S,200S,208G,225S
JF683790CY244Cyprus2009genomic DNA12316L,27I,83L,148V,180D,225S,230I
JF683791CY246Cyprus2009genomic DNA12316L,15L,120H
JF683792CY247Cyprus2009genomic DNA12316A,11I,14S,15M,27I,31V,54M,58I,71D,82K,92P,120S,133*,135V,148V,169F,178T,200S,203R,208E,230I
JF683793CY250Cyprus2009genomic DNA12316M,10L,15Y,18K,27I,28K,83L,148V,178T,225S
JF683794CY251Cyprus2009genomic DNA12314E,6L,7P,14G,15L,18K,54M,83L,91V,128D,148V,154K,180D
JF683795CY252Cyprus2009genomic DNA12316A,10W,11T,14N,15V,27I,45D,58I,71D,83T,120S,148V,169F,178T,183G,191T,200S,203R,208G
JF683796CY253Cyprus2009genomic DNA12316L,14P,15L,27I,75D,79D,83L,91V,110N,116A,120S,148V,178T
JF683797CY254Cyprus2009genomic DNA12316L,14P,91V,180D
JF683798CY255Cyprus2009genomic DNA12316A,11I,12Y,14S,15M,27I,31G,35G,54M,58I,71D,83L,86T,87Q,91F,92Q,98D,110N,120G,128D,148V,169F,178T,191I,203R,208G
JF683799CY256Cyprus2009genomic DNA12316A,15V,26A,27I,54M,58I,71D,79D,83T,92P,120S,148V,169F,178T,203R,208G,225S
JF683800CY257Cyprus2009genomic DNA12316M,41T,83L,87Q,91V,98D,120S,136M,154K,180D,194S,208G,225A
JF683801CY258Cyprus2009genomic DNA123114P,27I,83L,91V,123A,148V,180D,225S
JF683802CY259Cyprus2009genomic DNA12316A,14S,15M,18K,27I,35G,54M,58I,71D,92P,116A,120S,124V,131R,169F,178T,194S,200N,203R,207A,208G
JF683803CY260Cyprus2009genomic DNA12316L,27I,32C,37V,38R,40V,41T,43V,50S,54S,71D,83L,91V,116A,128D,148V,169F,178T,203R,208G,225S
JF683804CY262Cyprus2009genomic DNA12316L,15L,41T,83L,86G,136M,154K
JF683805CY263Cyprus2009genomic DNA12316L,37V,42G,43V,47G,83L,87Q,91V,98D,120S,136M,148I,180D,225S
JF683806CY265Cyprus2009genomic DNA12316A,14S,15M,27I,41T,54M,58I,71D,75D,79D,83T,92P,116A,120S,124V,135V,148V,154K,169F,178T,187D,200S,208G,225S
JF683807CY266Cyprus2009genomic DNA12316L,27I,148V,170R,180D,208G,210S
JF683808CY267Cyprus2009genomic DNA12316L,120H
JF683809CY268Cyprus2009genomic DNA12316L,7P,9G,11G,13P,15L,26G,27I,37V,38R,42G,47G,54A,57S,67R,71D,83L,91V,123A,148V,180D

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