Genbank References: capsid (p24)

HOME Genotype-Rx Genotype-Pheno Genotype-Clinical hivdb program

Genbank References: capsid (p24)

Authors	Title	Citation	E-value	# in Gb	#Pts	ART	Source	Cloning	StudyType
Boritz (2016)	CD4+ T cell targeting of human immunodeficiency virus type 1 (HIV-1) peptide sequences present in vivo during chronic, progressive HIV-1 disease	Virology 361 (1), 34-44 (2007)	3.46e-173	63	9	Naive	Plasma	Molecular clones	HLA

Download sequences

Accession	IsolateName	Country	Clone	MolType	Source	FirstAA	LastAA	MutList
DQ493657	subject UH156 p24 coding seque	Ethiopia	156A	genomic RNA	plasma	1	231	3M,6L,11A,12Y,14N,27I,36I,38S,41T,62R,71D,83L,91V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S,230I
DQ493658	subject UH156 p24 coding seque	Ethiopia	156B	genomic RNA	plasma	1	231	3M,6L,11A,12Y,14N,27I,36I,41T,71D,83L,91V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
DQ493659	subject UH156 p24 coding seque	Ethiopia	156C	genomic RNA	plasma	1	231	3M,6L,11A,12Y,14N,27I,36I,41T,71D,83L,91V,116A,124V,128D,148V,154K,169F,178T,180D,187D,199E,203R,208G,210S
DQ493660	subject UH156 p24 coding seque	Ethiopia	156D	genomic RNA	plasma	1	231	3M,6L,11A,12Y,14N,27I,36I,41T,71D,83L,91V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
DQ493661	subject UH156 p24 coding seque	Ethiopia	156E	genomic RNA	plasma	1	231	3M,6L,11A,12Y,14N,27I,36I,41T,71D,83L,91V,116A,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G,210S
DQ493662	subject UH156 p24 coding seque	Ethiopia	156F	genomic RNA	plasma	1	231	3M,6L,11A,12Y,14N,27I,36I,41T,71D,83L,91V,116A,124V,128D,148V,154K,169F,178T,180D,187D,201V,203R,208G,210S
DQ493663	subject UH168 p24 coding seque	USA	168A	genomic RNA	plasma	1	231	6L,41T,83L,91V,115V,120S,154K,180D
DQ493664	subject UH168 p24 coding seque	USA	168B	genomic RNA	plasma	1	231	6L,41T,83L,91V,115V,120S,154K,180D
DQ493665	subject UH168 p24 coding seque	USA	168C	genomic RNA	plasma	1	231	6L,41T,83L,115V,116R,120S,154K,178T
DQ493666	subject UH168 p24 coding seque	USA	168D	genomic RNA	plasma	1	231	6L,41T,83L,115V,120S,154K
DQ493667	subject UH168 p24 coding seque	USA	168E	genomic RNA	plasma	1	231	6L,41T,83L,115V,120S,154K,163G
DQ493668	subject UH168 p24 coding seque	USA	168F	genomic RNA	plasma	1	231	6L,41T,83L,91V,115V,120S,123S,154K
DQ493669	subject UH178 p24 coding seque	USA	178A	genomic RNA	plasma	1	231	6L,83L,124T,180D,208G,225S
DQ493670	subject UH178 p24 coding seque	USA	178B	genomic RNA	plasma	1	231	6L,83L,120S,124T,180D,208G,225S
DQ493671	subject UH178 p24 coding seque	USA	178C	genomic RNA	plasma	1	231	6L,41A,83L,120S,124T,180D,208G,225S
DQ493672	subject UH178 p24 coding seque	USA	178D	genomic RNA	plasma	1	231	6L,83L,87Q,91V,180D,208G,225S
DQ493673	subject UH178 p24 coding seque	USA	178E	genomic RNA	plasma	1	231	6L,41A,72A,83L,120S,124T,180D,208G,225S
DQ493674	subject UH178 p24 coding seque	USA	178F	genomic RNA	plasma	1	231	6L,41A,83L,120S,124T,180D,208G,225S
DQ493675	subject UH178 p24 coding seque	USA	178G	genomic RNA	plasma	1	231	6L,83L,120S,124T,180D,208G,225S
DQ493676	subject UH178 p24 coding seque	USA	178H	genomic RNA	plasma	1	231	6L,41A,83L,120S,124T,180D,208G,225S
DQ493677	subject UH185 p24 coding seque	USA	185A	genomic RNA	plasma	1	231	6L,83L,230I
DQ493678	subject UH185 p24 coding seque	USA	185B	genomic RNA	plasma	1	231	6L,40L,83L
DQ493679	subject UH185 p24 coding seque	USA	185C	genomic RNA	plasma	1	231	6L,83L,127R,161L,230I
DQ493680	subject UH185 p24 coding seque	USA	185D	genomic RNA	plasma	1	231	6L,83L,230I
DQ493681	subject UH185 p24 coding seque	USA	185E	genomic RNA	plasma	1	231	6L,83L,204T,230I
DQ493682	subject UH200 p24 coding seque	USA	200A	genomic RNA	plasma	1	231	6M,83L,154K,171V,180D,191I
DQ493683	subject UH200 p24 coding seque	USA	200B	genomic RNA	plasma	1	231	6M,83L,154K,171V,180D
DQ493684	subject UH200 p24 coding seque	USA	200C	genomic RNA	plasma	1	231	6M,83L,94S,154K,171V,180D
DQ493685	subject UH200 p24 coding seque	USA	200D	genomic RNA	plasma	1	231	6M,83L,154K,171V,180D
DQ493686	subject UH200 p24 coding seque	USA	200E	genomic RNA	plasma	1	231	6M,83L,154K,171V,180D
DQ493687	subject UH200 p24 coding seque	USA	200F	genomic RNA	plasma	1	231	6M,83L,154K,171V,180D,191I
DQ493688	subject UH202 p24 coding seque	USA	202A	genomic RNA	plasma	1	231	6L,15L,27I,83M,87Q,96I,116A,148V,178T,208G
DQ493689	subject UH202 p24 coding seque	USA	202B	genomic RNA	plasma	1	231	6L,15L,27I,83M,87Q,96I,116A,148V,178T,208G
DQ493690	subject UH202 p24 coding seque	USA	202C	genomic RNA	plasma	1	231	6L,15L,27I,83M,87Q,96I,116A,148V,178T,208G
DQ493691	subject UH202 p24 coding seque	USA	202D	genomic RNA	plasma	1	231	15L,27I,83M,87Q,96I,116A,148V,178T,208G
DQ493692	subject UH202 p24 coding seque	USA	202E	genomic RNA	plasma	1	231	6L,15L,27I,83M,87Q,96I,99S,116A,148V,178T,208G
DQ493693	subject UH202 p24 coding seque	USA	202F	genomic RNA	plasma	1	231	6L,15L,27I,83M,87Q,96I,116A,148V,178T,208G
DQ493694	subject UH202 p24 coding seque	USA	202G	genomic RNA	plasma	1	231	15L,27I,83M,87Q,96I,116A,148V,178T,208G
DQ493695	subject UH202 p24 coding seque	USA	202H	genomic RNA	plasma	1	231	6L,15L,27I,83M,87Q,96I,116A,148V,178T,208G
DQ493696	subject UH208 p24 coding seque	USA	208A	genomic RNA	plasma	1	231	6L,15L,41T,91V,154K,194S,208G
DQ493697	subject UH208 p24 coding seque	USA	208B	genomic RNA	plasma	1	231	6L,15L,41T,91V,154K
DQ493698	subject UH208 p24 coding seque	USA	208C	genomic RNA	plasma	1	231	6L,15L,41T,91V,154K
DQ493699	subject UH208 p24 coding seque	USA	208D	genomic RNA	plasma	1	231	6L,15L,41T,91V,154K
DQ493700	subject UH208 p24 coding seque	USA	208E	genomic RNA	plasma	1	231	6L,15L,41T,91V,154K
DQ493701	subject UH208 p24 coding seque	USA	208F	genomic RNA	plasma	1	231	6L,15L,41T,91V,154K
DQ493702	subject UH208 p24 coding seque	USA	208G	genomic RNA	plasma	1	231	6L,15L,41T,91V,154K,208G
DQ493703	subject UH208 p24 coding seque	USA	208H	genomic RNA	plasma	1	231	6L,15L,41T,91V,154K
DQ493704	subject UH208 p24 coding seque	USA	208I	genomic RNA	plasma	1	231	6L,15L,41T,154K
DQ493705	subject UH208 p24 coding seque	USA	208J	genomic RNA	plasma	1	231	6L,15L,41T,91V,154K,208G
DQ493706	subject UH210 p24 coding seque	USA	210A	genomic RNA	plasma	1	231	6L,91V
DQ493707	subject UH210 p24 coding seque	USA	210B	genomic RNA	plasma	1	231	6L,91V
DQ493708	subject UH210 p24 coding seque	USA	210C	genomic RNA	plasma	1	231	6L,91V,221I
DQ493709	subject UH210 p24 coding seque	USA	210D	genomic RNA	plasma	1	231	6L,91V
DQ493710	subject UH210 p24 coding seque	USA	210E	genomic RNA	plasma	1	231	6L,91V
DQ493711	subject UH210 p24 coding seque	USA	210F	genomic RNA	plasma	1	231	6L
DQ493712	subject UH210 p24 coding seque	USA	210G	genomic RNA	plasma	1	231	6L,91V
DQ493713	subject UH212 p24 coding seque	USA	212A	genomic RNA	plasma	1	231	6A,83L,86A,87Q,91V,96I,116A,120H,136M,154K,194S,225S
DQ493714	subject UH212 p24 coding seque	USA	212C	genomic RNA	plasma	1	231	6A,83L,86A,87Q,91V,96I,116A,120H,136M,154K,194S,225S
DQ493715	subject UH212 p24 coding seque	USA	212D	genomic RNA	plasma	1	231	6A,83L,86A,87Q,91V,96I,116A,120H,136M,154K,194S,225S
DQ493716	subject UH212 p24 coding seque	USA	212E	genomic RNA	plasma	1	231	6A,83L,86A,87Q,91V,96I,116A,120H,136M,154K,194S,225S
DQ493717	subject UH212 p24 coding seque	USA	212F	genomic RNA	plasma	1	231	6A,83L,86A,87Q,91V,96I,116A,120H,136M,154K,194S,225S
DQ493718	subject UH212 p24 coding seque	USA	212G	genomic RNA	plasma	1	231	6A,83L,86A,87Q,91V,96I,116A,120H,136M,154K,194S,225S
DQ493719	subject UH212 p24 coding seque	USA	212H	genomic RNA	plasma	1	231	6A,83L,86A,87Q,91V,96I,116A,120H,136M,154K,194S,225S

Genbank References: capsid (p24)

Database

Resources

Team