<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb
#PtsARTSourceCloningStudyType
Kusagawa (2022) Nucleotide Sequence of HIV-1-Positive Specimen Reference Panel for Evaluation of HIV In Vitro Diagnostics in Japan AIDS Res Hum Retroviruses 37 (12), 994-997 (2021) 5.81e-166 173          

Download sequences

AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
LC645526genomic RNAgenotype: Subtype B12316L,27I,75D,83L,87P,91H,92P,96I,110N,116A,194S
LC645527genomic RNAgenotype: Subtype B12316L,14P,27I,41T,83L,91N,92P,116A,120S,154K,194S
LC645528genomic RNAgenotype: Subtype B12316L,14P,78V,83L,91N,92P,116A,194S,208T,216A,225S,230I
LC645529genomic RNAgenotype: Subtype B12316L,83L,91N,92P,116A
LC645530genomic RNAgenotype: Subtype B123183L,154K,194S
LC645531genomic RNAgenotype: Subtype B123141A,91A,120R,154K,225S
LC645532genomic RNAgenotype: Subtype B12316L,83L,91V,96L,110N,134T,154K,178A,225S
LC645533genomic RNAgenotype: Subtype B12316L,83L,154K,180D,194S,225S,230I
LC645534genomic RNAgenotype: Subtype B12316M,14P,41T,75D,79D,83L,91V,120S,154K,171V,180D,210S
LC645535genomic RNAgenotype: Subtype B12316M,41A,91D,93Q,120R,154K,225S
LC645536genomic RNAgenotype: Subtype B12316L,83L,91V,95N,96L,99A,106R,115L,116E,154K,178T
LC645537genomic RNAgenotype: Subtype B12316L,14P,44A,83L,86A,87Q,120S,154K,170R
LC645538genomic RNAgenotype: Subtype B12316L,83L,91V,96L,110N,154K,178T
LC645539genomic RNAgenotype: Subtype B123114P,41A,83L,116A,128D,132K,136M,148S,154K,225A
LC645540genomic RNAgenotype: Subtype B12316A,87Q,120H,154K,225S
LC645541genomic RNAgenotype: Subtype B12316L,14P,83L,91N,92P,148V,149G,154K,194S,216A,225S,230I
LC645542genomic RNAgenotype: Subtype B12316M,83L,116A,180D
LC645543genomic RNAgenotype: Subtype B12316L,14P,72A,83L,86Q,87Q,91Y,92P,116A,120S,124V,154K,194S
LC645544genomic RNAgenotype: Subtype B123114P,79D,83L,148S,194S,230I
LC645545genomic RNAgenotype: Subtype B12316L,27I,83L,148V,178T
LC645546genomic RNAgenotype: Subtype B12316L,15L,27I,41T,86A,87Q,96I,116T,148V,154K,180D
LC645547genomic RNAgenotype: Subtype B12316L,83L
LC645548genomic RNAgenotype: Subtype B12316L,83L,86P,87Q,91N,92P,120S,194S,225S
LC645549genomic RNAgenotype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,178T,200S,207T,208G,225S
LC645550genomic RNAgenotype: Subtype B12316L,27I,83L,87Q,91N,92P,154K,194S,225S
LC645551genomic RNAgenotype: Subtype B12316L,15L,41T,83L,87Q,91N,92P,154K,194S,230I
LC645552genomic RNAgenotype: Subtype B12316V,14P,41A,83L,116A,128D,132K,136M,148S,154K,225S
LC645553genomic RNAgenotype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,59I,71D,87Q,92P,110N,120S,128D,148V,149G,183H,200S,207T,208G,225S
LC645554genomic RNAgenotype: Subtype B12316V,83L,86A,87Q,120S,136M,154K,194S
LC645555genomic RNAgenotype: Subtype B12316L,27I,83L,91N,92P,148I,194S,230I
LC645556genomic RNAgenotype: CRF01_AE12316A,14S,15L,31G,33N,54M,58I,78V,83T,92P,120S,128D,148V,149G,178T,200S,207T,208G
LC645557genomic RNAgenotype: Subtype B12316L,27I,83L,91A,96L,148V,194S,208G
LC645558genomic RNAgenotype: Subtype B12316L,14P,27I,41T,83L,87Q,91N,92P,120S,154K,194S,225A
LC645559genomic RNAgenotype: Subtype B12316L,83L,91V,148S,180D,194S,208G,225S
LC645560genomic RNAgenotype: Subtype B12316L,15L,41T,83L,148S,154K,180D,194S,225S,230I
LC645561genomic RNAgenotype: Subtype B12316L,14P,83L,87Q,91H,92P,116A,194S,216A
LC645562genomic RNAgenotype: Subtype B12316L,27I,41T,75D,83M,86A,87Q,91L,92P,93A,98D,116A,120G,154K,194S
LC645563genomic RNAgenotype: Subtype B12316L,15L,27I,83L,120H,148V,208G
LC645564genomic RNAgenotype: Subtype B12316L,14P,27I,36I,41T,83L,86A,87Q,91H,92P,96I,116A,124V,135V,148V,180D
LC645565genomic RNAgenotype: Subtype B12316L,83L,87Q,154K,225S
LC645566genomic RNAgenotype: Subtype B12316L,14P,72A,83L,86P,87Q,91Y,92P,116A,120S,124V,154K,194S
LC645567genomic RNAgenotype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,83I,86A,87Q,92P,96I,116R,128D,148V,178T,200S,207T,208G,225S
LC645568genomic RNAgenotype: CRF08_BC12316L,14P,15L,41T,71D,83L,87Q,98D,120S,154K,169F,178T,180D,187D,203R,208G,225S
LC645569genomic RNAgenotype: CRF01_AE12316A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,149G,178T,200S,207T,208G,225S
LC645570genomic RNAgenotype: Subtype B12316M,14P,27I,83L,148V,180D
LC645571genomic RNAgenotype: Subtype B12316L,27I,36I,83L,116A,128D,136M,148V,225S
LC645572genomic RNAgenotype: Subtype B12316L,41A,83L,91N,92P,93Q,120S,154K,194S
LC645573genomic RNAgenotype: Subtype B12316L,83L,91N,92P,194S
LC645574genomic RNAgenotype: Subtype B12316L,83L,91N,92P,116A
LC645575genomic RNAgenotype: Subtype B12316L,83L,96I,116A,154K,210S
LC645576genomic RNAgenotype: Subtype B12316A,83L,86P,87Q,154K
LC645577genomic RNAgenotype: Subtype B12316M,14P,83L,128D,154K,171V,183G
LC645578genomic RNAgenotype: Subtype B12316L,27I,36I,83L,87Q,91N,92P,148V,178T,194S,225S,230I
LC645579genomic RNAgenotype: Subtype B12316L,14P,83L,86P,87Q,107S,120S,124V,210P
LC645580genomic RNAgenotype: Subtype B12316L,15L,18K,41T,83L,110N,154K
LC645581genomic RNAgenotype: Subtype B12316L,14P,83L,91N,92P,116A,194S,216A,225S,230I
LC645582genomic RNAgenotype: Subtype B12316L,14P,15L,120H
LC645583genomic RNAgenotype: Subtype B12316M,14P,83L,154K,171V,180D
LC645584genomic RNAgenotype: Subtype B12316L,14P,27I,83L,87Q,91H,92P,116A,183R,194S,225S,230I
LC645585genomic RNAgenotype: Subtype B12316L,83L,87P,91N,92P,154K,194S,208T
LC645586genomic RNAgenotype: Subtype B12316L,14P,27I,41T,83L,120H,128D,148S,154K
LC645587genomic RNAgenotype: Subtype B12316L,14P,83M,91H,92P,194S
LC645588genomic RNAgenotype: Subtype B12316L,83L,91N,92P,194S
LC645589genomic RNAgenotype: Subtype B12316V,41A,91A,120H,154K,225S,230I
LC645590genomic RNAgenotype: Subtype B12316L,13H,14P,41T,83L,91N,92P,93V,96L,120S,123A,180D,199R,225S
LC645591genomic RNAgenotype: CRF01_AE12316A,11T,14S,15L,31G,33N,54M,58I,83I,92P,120S,128D,148V,178T,200S,207T,208G,225S
LC645592genomic RNAgenotype: Subtype B12316L,83L,87Q,98D,120S,180D
LC645593genomic RNAgenotype: Subtype B12316L,83L,107S,124V,154K,225S,230I
LC645594genomic RNAgenotype: CRF01_AE12316A,14P,15L,31G,33N,54M,58I,83I,91V,148V,178T,200S,207T,208G,209T,225S
LC645595genomic RNAgenotype: Subtype B12316L,78I,83L,120S,183T,191I,194S
LC645596genomic RNAgenotype: Subtype B12316L,83L,194S
LC645597genomic RNAgenotype: CRF01_AE12316A,10A,15V,31G,33N,45D,54M,58I,87Q,92P,96I,116A,128D,148V,178T,200S,207T,208G,225S
LC645598genomic RNAgenotype: Subtype B12316L,14P,79D,83L,154K
LC645599genomic RNAgenotype: Subtype B12316A,83L,86P,87Q,154K
LC645600genomic RNAgenotype: Subtype B12316L,14P,44A,83L,86A,87Q,91V,96L,120S,225S
LC645601genomic RNAgenotype: Subtype B12316L,83M,91H,92P,194S
LC645602genomic RNAgenotype: CRF01_AE12316A,14S,15L,27I,31G,33N,54M,58I,75D,79D,83L,86A,87Q,91F,92P,120S,148V,149G,154K,200S,207T,208G,225S
LC645603genomic RNAgenotype: Subtype B12316L,15L,27I,41T,83L,148V,154K,180D
LC645604genomic RNAgenotype: Subtype B12316L,14P,44A,83L,86P,87Q,91V,98D,120S
LC645605genomic RNAgenotype: Subtype B12316M,14P,83L,154K,171V,180D,203I
LC645606genomic RNAgenotype: Subtype B12316L,83L,87Q,91N,92P,154K,194S
LC645607genomic RNAgenotype: Subtype B12316L,83L,87Q,91N,92P,96L,194S
LC645608genomic RNAgenotype: Subtype B12316L,14P,27I,75D,83L,154K,194S,225S
LC645609genomic RNAgenotype: Subtype B12316L,41A,91D,92P,120S,154K
LC645610genomic RNAgenotype: CRF02_AG12316A,15V,27I,31G,41T,58I,71D,87Q,92P,96I,120S,148V,169F,178T,203R,208G
LC645611genomic RNAgenotype: Subtype B12316L,83L,91N,92P,154K,180D,194S,225S,230I
LC645612genomic RNAgenotype: Subtype B12316L,14P,71D,83L,86I,100K,112S,116A,128D,170R,180D
LC645613genomic RNAgenotype: Subtype B12316L,27I,41T,83L,91N,92P,120S,136M,148V,149G,154K,194S
LC645614genomic RNAgenotype: CRF01_AE12316A,14S,15L,31G,33N,54M,58I,92P,120S,123A,128D,148V,178T,200S,207T,208G,225S
LC645615genomic RNAgenotype: Subtype B12316L,27I,75D,79Q,83L,87P,91Y,92P,96I,98D,116T,120S,154K,194S,225S,230I
LC645616genomic RNAgenotype: Subtype B12316L,31G,33N,41T,86L,120H,128D,148V,178T,204S,207V,208G
LC645617genomic RNAgenotype: Subtype B12316L,31G,33N,41T,120H,128D,148V,178T,204S,207V,208G
LC645618genomic RNAgenotype: Subtype B12316L,75D,83L,87P,91N,92P,94R,96I,98D,116A
LC645619genomic RNAgenotype: Subtype B12316L,41T,83L,91N,92P,94R,100K,120S,154K,180D,194S,210S
LC645620genomic RNAgenotype: CRF02_AG12316A,11T,14S,15M,27I,54M,58I,71D,83I,120S,148V,169F,178T,180D,203R,208G
LC645621genomic RNAgenotype: Subtype B12316M,14P,41T,83L,91A,120S,135V,136M,154K,171V,213D
LC645622genomic RNAgenotype: Subtype B12316L,83L,91N,92P,116A,154K,170R,178T,194S
LC645623genomic RNAgenotype: Subtype B12316L,14P,16A,41T,72V,83L,91A,96L,110S,120S,135V,136M,154K,208G
LC645624genomic RNAgenotype: Subtype B12316M,14P,41T,83M,94A,120S,154K,171V,180D
LC645625genomic RNAgenotype: Subtype B12316L,27I,83L,91A,120S,148V,178T
LC645626genomic RNAgenotype: Subtype B12316L,78I,83L,86M,87Q,91L,96I,116T,120S,183T,210S
LC645627genomic RNAgenotype: Subtype B12316A,10V,14P,27I,41T,71D,83L,86P,87Q,91H,92P,116A,120S,124V,154K,180D,210S
LC645628genomic RNAgenotype: CRF01_AE12316A,14S,15L,31G,33N,45D,54M,58I,87Q,92P,96V,116A,128D,148V,178T,200S,207T,208G,225S
LC645629genomic RNAgenotype: Subtype B123178S,83L,112A,116A,124V,136M
LC645630genomic RNAgenotype: Subtype B12316L,15L,27I,41T,83L,87Q,91N,92P,154K,194S,225S
LC645631genomic RNAgenotype: Subtype B12316M,14P,41T,83M,91V,120S,154K,171V,180D
LC645632genomic RNAgenotype: Subtype B12316L,27I,75D,83L,87P,91N,92P,96L,148V
LC645633genomic RNAgenotype: Subtype B12316L,15L,27I,75D,83L,96L,208G
LC645634genomic RNAgenotype: Subtype B12316L,14P,15L,27I,83L,110N,120H,148V,225S
LC645635genomic RNAgenotype: Subtype B12316L,41T,75D,83L,91N,92P,96I,116A,148S,154K,180D,225A
LC645636genomic RNAgenotype: CRF01_AE12316A,11T,14P,15V,31G,33N,54M,58I,83S,92P,107S,120S,128D,148V,178T,200S,207T,208G,225S
LC645637genomic RNAgenotype: Subtype B12316L,41T,83L,86Q,87Q,120S,124V,154K,180D,225S
LC645638genomic RNAgenotype: Subtype B12316L,75D,83L,86I,180D,225S
LC645639genomic RNAgenotype: Subtype B12316L,14P,27I,41T,83L,87Q,91H,92P,154K,194S,225S
LC645640genomic RNAgenotype: Subtype B12316L,91V,148V,180D
LC645641genomic RNAgenotype: Subtype B12316L,91V,120S,148I,180D
LC645642genomic RNAgenotype: Subtype B12316L,15L,27I,41T,83L,91N,92P,136M,148V,149G,154K,194S,225S
LC645643genomic RNAgenotype: Subtype B12316M,83L,86A,87Q,96I,116T,180D,230I
LC645644genomic RNAgenotype: Subtype B12316L,27I,41T,83L,148V,154K,199R,230I
LC645645genomic RNAgenotype: Subtype B12316M,14P,107S,120S,154K,171V,225S
LC645646genomic RNAgenotype: Subtype B12316L,14P,16A,36I,41T,72V,79D,83L,87Q,91V,96L,135V,136I,148V,154K,178T,208G
LC645647genomic RNAgenotype: Subtype B12316L,27I,41T,83L,87Q,91N,92P,116A,124V,194S,208G
LC645648genomic RNAgenotype: Subtype B12316L,15L,41T,75D,83L,116A,154K,208G,229K
LC645649genomic RNAgenotype: CRF02_AG12316A,10V,14P,27I,31S,41T,54M,58I,71D,75D,83A,87Q,92P,96I,120S,135V,148V,169F,178T,183G,187D,189F,191I,193D,203R,208G,225S,230I
LC645650genomic RNAgenotype: Subtype B12316L,27I,41T,83L,86A,87Q,91V,96I,98D,116A,124V,154K,194S
LC645651genomic RNAgenotype: Subtype B12316L,15L,27I,41T,83L,87Q,91N,92P,136M,148V,149G,154K,194S,225S
LC645652genomic RNAgenotype: Subtype B12316L,14P,27I,71D,79D,83L,86T,87Q,91H,92P,93A,120S,154K,180D,225S
LC645653genomic RNAgenotype: Subtype B12316L,27I,41T,83L,86A,87Q,91H,92P,93A,96L,98D,116A,124V,194S,208G
LC645654genomic RNAgenotype: Subtype B12316L,27I,36I,79D,83L,154K,194S
LC645655genomic RNAgenotype: CRF01_AE12316A,15L,31G,33N,54M,58I,71D,79D,83T,92P,128D,148V,154K,178T,200S,207T,208G,225S
LC645656genomic RNAgenotype: Subtype C123114P,17A,41T,71D,83L,116A,121K,124V,128D,148V,154K,169F,178T,180D,187D,203R,208G
LC645657genomic RNAgenotype: Subtype B12316L,14P,78L,83M,87Q,91H,92P,120S,148V,194S,210S,216A,225S,230I
LC645658genomic RNAgenotype: CRF01_AE12316P,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
LC645659genomic RNAgenotype: Subtype B12316L,14N,83L,86A,87Q,91H,92P,120S,154K,180D
LC645660genomic RNAgenotype: Subtype B12316L,27I,41T,83L,86A,87Q,91H,92P,116A,120S,124V,194S,208G
LC645661genomic RNAgenotype: Subtype B12316M,14P,27I,83L,148V,180D,225S
LC645662genomic RNAgenotype: Subtype B12316L,14P,83L,87Q,91H,92P,116A,194S,216A,225S,230I
LC645663genomic RNAgenotype: URF12316A,14S,15L,41T,71D,83L,86Q,87Q,92P,96I,116T,148S,154K,169F,178T,180D,187D,203R,207S,208G
LC645664genomic RNAgenotype: Subtype B12316L,14P,27I,41T,83L,87P,91N,92P,96I,98D,116A,128D,148S,154K,194S,225S,230I
LC645665genomic RNAgenotype: Subtype B12316L,15L,27I,41T,83L,87Q,91N,92P,96I,116A,154K,194S,209G
LC645666genomic RNAgenotype: Subtype B12316L,14T,83L,86P,87Q,91H,92P,120S,148I,154K,180D
LC645667genomic RNAgenotype: Subtype B12316M,27I,83L,91V,120S,136M,148V,149G,154K,171V
LC645668genomic RNAgenotype: Subtype B12316L,14P,15L,41T,83L,87Q,91H,92P,120H,154K,180D,194S,225S,230I
LC645669genomic RNAgenotype: Subtype B12316L,83L,86P,87Q,91H,92P,96L,98D,120S,148I,154K,180D
LC645670genomic RNAgenotype: Subtype B12316L,14P,27I,71D,83L,86P,87Q,91V,120S,148V,149G
LC645671genomic RNAgenotype: Subtype B12316L,83L,91V,110N,180D,225S
LC645672genomic RNAgenotype: Subtype B123183L,136M,154K,225S
LC645673genomic RNAgenotype: Subtype B12316L,14P,41T,87Q,96I,116T,120S,187D,225S
LC645674genomic RNAgenotype: Subtype B12316L,41T,83L,87Q,91H,92P,116A,200H
LC645675genomic RNAgenotype: Subtype B12316L,14P,83L,86A,87Q,91H,92P,96I,98D,116A,194S,216A,230I
LC645676genomic RNAgenotype: Subtype B12316M,14P,83L,86P,87Q,96I,116T,154K,171V,225A
LC645677genomic RNAgenotype: Subtype B12316L,14P,83L,136M,148V,149G,154K,180D,200L,204S,230I
LC645678genomic RNAgenotype: Subtype B12316L,15L,27I,41T,83L,86A,87Q,91V,120S,123A,148A,154K,194S,208G,225A
LC645679genomic RNAgenotype: CRF07_BC12313I,6L,14P,41T,68I,71D,83L,96T,116T,120G,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I
LC645680genomic RNAgenotype: Subtype B12316L,83L,91N,92P,116A,194S,225S,229K,230I
LC645681genomic RNAgenotype: Subtype B12316L,14P,71D,83L,116A,128D,154K,170R,180D,194C,195D,225S
LC645682genomic RNAgenotype: Subtype B123127I,83L,87Q,91H,92P,116A,148S,154K,194S,208G,225S,230I
LC645683genomic RNAgenotype: Subtype B12316M,11I,14P,50A,79D,83L,87Q,91V,120A,154K,171V,194C,225S
LC645684genomic RNAgenotype: Subtype B12316L,14P,41T,83L,91N,92P,96L,116A,128D,148S,154K,180D,200I,204S,208G,225S
LC645685genomic RNAgenotype: Subtype B12316L,15L,27I,83M,148V
LC645686genomic RNAgenotype: Subtype B12316M,14P,41T,78V,83L,87Q,96I,116T,154K,171V,210S
LC645687genomic RNAgenotype: Subtype B12316L
LC645688genomic RNAgenotype: Subtype B12316L,14P,83L,86A,87Q,91H,92P,96I,98D,116A,194S,216A,230I
LC645689genomic RNAgenotype: Subtype B12316L,8A,14P,83L,86A,87Q,91H,92P,120S,148V,149G,154K,194S,216A,225S,230I
LC645690genomic RNAgenotype: Subtype B12316L,14P,27I,83L,91V,116A,128D,136M,148I,178T
LC645691genomic RNAgenotype: Subtype B12316L,27I,41T,78S,83L,87Q,91V,116A,120S,124V,154K,225S
LC645692genomic RNAgenotype: CRF01_AE12316A,11A,12Y,14S,15V,31G,33N,54M,58I,87Q,92Q,96V,115V,116A,120S,128D,148I,178T,200S,203R,207T,208G,225S
LC645693genomic RNAgenotype: Subtype B12316M,14P,41T,78V,83L,87Q,96I,116T,154K,171V,210S
LC645694genomic RNAgenotype: Subtype B12316M,11I,50A,79D,83L,91V,120S,154K,171V,225S
LC645695genomic RNAgenotype: Subtype B12316L,15L,27I,41T,148V,154K,180D
LC645696genomic RNAgenotype: Subtype B12316L,14P,83L,86A,87Q,91H,92P,96I,98D,116A,194S,216A,230I
LC645697genomic RNAgenotype: Subtype B12316L,14P,16T,41T,79D,83L,120S,148S,154K,225S
LC645698genomic RNAgenotype: Subtype B12316L,27I,36I,83L,87Q,91H,92P,120H,128D,148V,180D,194S,225S,230I