<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Saladini (2012) Near Full-Length Sequence Analysis of HIV Type 1 BF Recombinants from Italy AIDS Res. Hum. Retroviruses 28 (3), 299-303 (2012) 8.4e-152 14          

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
GU595159104045Italy29-Aug-2007genomic DNAunique BF recombinant12256L,14P,27I,31G,33K,44A,63*PQS,64AT,66MV,68I,71D,79D,83L,92P,107S,116Q,118I,120S,124V,148V,169F,179HQ,180D,192R,194AS,203T,205X,206X,207X,208X,209X,210X,211X,212X,213X,214X,215X,215X_XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPEPTAPPAESFGFGREEINTPSPRQEQQNEGKYPPLASLKRSLFGNDPSSQ*K*RDS*GKLY*IQEQMIQY*KI*ICQENGNQE**GELEVLSK*NSMITYL*KFVDTRLQVQY**DLHLST*LEEIC*LRLVAL*IFPLVLLKLYQ*N*SQEWMAQKLNSGH*QKKK*KH**KSVQKWKRKGKFQKLGLKIPIILQYLP*RKKIVLNGEN**ISESLIKELKIFGRFN*GYRILQG*KRKNQ*QYWMWEMHIFQFP*MKTSGSILHLPYLVQTMRHQGLDINTMCCHRDGKDHQQYSKAA*QKS*SLLENKIQT*LFTNTWMICM*GLT*K*GNIEQK*RS*ENIY*NGD*LHQTKNIRKNPHSFGWVMNSILINGQYSL*CCQKKTAGLSMTYRS*WEN*TGQVRFTQGLK*SNYVSSLGEPRH*QK*YH*QKKQS*NWQKTGKF*KNQYMGYIMTRQKT**QKYRNRGKVSGHIKFIKSHLKI*KQENMQE*GVPTLMM*NN*QRQCKK*PQRA**YGERLLSLDYPY*KKHGKHGGQTIGRPPGFLNGSLSILLL**NYGIS*KQNPY*QEQKPSM*MGHLIERQKWGKQDMLLTEEDKKRSP*LKPQIRRLSYKQFS*LYRIQSQK*T**QTHNMH*DEXFKHNQIKVNQR*SIK**SN**KRKRSTCHGYQHTKELEEMNK*WIN*SVLESGKYHYF*ME*IEPKKSMKNITTIGEQWLVILICHQR**QKR**LAVVISVNS*KGKPCMG**TVVQGYGN*IVHI*REKLCW*QSM*LVGT*KQKLSQQKQDKKQPTSY*S*QEDGQ*KQYIQTMAPISPVLPQLRQPVGGQVSSRNLEFPTIPKVKE**NR*IKS*RKS*DR*EIQLDILRQQYKWPYSSTILKEKGGLGGTV*GIKRXCG*T**HQTYKLQNYKNKL*KFKISGFITGTAETQFGKDQQSYSGKVKGQ*SYKTIVK*R*YQEEKQKSLGIMENRWQVMIVWQVDRMRINAWKSLVKYHMHVSKRAKGRWFYRHHFDSRHPKVSSEVHIPFLEEDIKLVITPTYWGLHTGERDWHLGQGVSIEWRQGRYRTQVDPGLADQLIHIYYFLPSDCFSESAIRKAILGHRVSPRCNYQAGHNKVGSLQYLALTALIAPKKPKPPLPSVQKLVEDRWNTPQKTKRHKGTHTMNGH*SF*RSLRMNLLDIFSLAGHGSMA*DNISITPMGILGRELKL**GYCNNYCLSISELGAIIAE*ALFGREE*EMDPVDPSLDPWNHPGSQPATPCTKCYCKKCCFHCQWCFTTKGLGISYGRKKRRQRRRTSPGSQSHLDPLSEQ*VVHVMPSLEIVGASVALVVVLIIAIVVWTIVYIEYKKILRQRAINRLYERILERSEDSGNESEGDAEELAALGEVGPFNLGNINNL*CCRQLVGHSLLWGTCVEGRSNHHSILCLRCSSI*SRGT*CLGYTCLCTHRSQSSRGSSRKCNRIF*YVEKQYGRTNA*RYNQFMGSKPKAMCEVNPTLCYFTL*ECHLQWHSKQHPGRKARGNTKLFFQYDHRSKG*AEESTSTFL*TRYSAN*QY*Q*QWRLQANKLQYLNHYTGLSKGVLGSNSHTLLCSGWLCADSKV*PQS*C*RIVQWDRAMQQCEHSTVYTWH*TSGINSIVVKWQLRRRRYHNQISKYLR*CKQKNRSHNSTP**ICTD*LYKTQQQYKEKKYTYRTRKSILCNRRHNRRHP*TGTL*C*WSTLME*YNVRPTGKDKVRALFP**NNNLCPSLRRGPRGYNA*F*L*RRIFLLQYIRIV*LYTVW*RLLFS*V**HHTQ*HYHSPMSNKTNCKHVAGSRTSNVYRSHCRKNHL*LKYYRYTIDKRWW**K*Y**Y*DLQTWGRKYERQLEK*II*IQSSRN*TTRSSTHQGTKTSGGERKKSSSGTRSSVPGWVLVSSRKHYGRSVNSADGTGQAIIVWNSATAEQSAEGY*SATAYVAAHSLGH*TAPGKSPGCGEIPTGSTAPRALGLLWKTHLHH*CALEH*LEQ*INSG*DLGKHDLDGVGKRD*QLLST*NIQVN*SIAEPAGKE*TRIIGIRQMGKSVELV*HNKLAVVYKNIHNDSRRLDRLKNSFYCAFYSK*S*EGILTFVITDPYPTNEGGTRQARRNRRRRWRARQRQIRALSERILVSYLGRPEEPVPLQLPPLENLHINCSEDCGQ,216G,218AT,219E,223S,225Q
GU59514830638Italy21-Jul-2002genomic DNAunique BF recombinant12316L,15L,27I,58PT,65AV,71D,83L,92P,116Q,120S,124V,147PS,148V,169F,178T,183G,200I,204S,207T,208G,210S,225S
GU59515650610Italy07-Jun-2001genomic DNAunique BF recombinant12286L,15L,16T,71D,83M,87Q,92P,96I,116Q,120S,124V,137AG,138K,139NT,140EKQ,148V,169F,178T,183G,207T,208G,216X,217X,218X,219X,220X,221X,222X,223X,224PS,225CFGV,226HQ,227KN
GU59516250612Italy07-Jun-2001genomic DNAunique BF recombinant123110IM,16T,38HP,45X,46X,47X,57NY,71D,83M,87Q,92P,96I,116Q,120S,124V,148V,169F,183G,187DFVY,208G
GU59514953143Italy26-Sep-2001genomic DNAunique BF recombinant12312V,6L,27I,71D,83L,92P,116Q,120D,124V,147L,152DG,159K,161L,168S,178T,181L,187D,193KN,194AP,197DV,198CFGV,208G,225S
GU59515057954Italy15-Apr-2002genomic DNAunique BF recombinant12306L,15L,45D,71D,83L,92P,116Q,120S,124V,148V,154K,169F,177C,178T,183G,187D,200H,208G,225S
GU59516058736Italy22-May-2002genomic DNAunique BF recombinant12282V,6L,27I,71D,83L,92P,116Q,120S,124V,134IV,148V,154K,169F,170R,178T,187D,208G,216X,217X,218X,219X,220X,221X,222X,223X,224PS,225IST,226HQ,227X,228APT
GU59515159211Italy18-Jun-2002genomic DNAunique BF recombinant123115L,71D,83L,92P,116Q,120GS,124V,148V,169F,177C,178T,183G,187D,199R,208G
GU59516159352Italy19-Jun-2002genomic DNAunique BF recombinant12316M,15L,27I,33NS,41T,71D,83I,92P,110N,116Q,120GS,124V,148V,169F,171NT,178T,183G,187D,208G,225S
GU59515461842Italy12-Nov-2002genomic DNAunique BF recombinant12316L,14S,15L,83L,91V,116N,120S,180D,190M,191I,208G,214IM,218CS
GU59515762136Italy27-Nov-2002genomic DNAunique BF recombinant12312V,6L,27I,71D,83L,92P,116Q,120S,124V,148V,154K,169F,170R,178T,187D,208G,216X,217X,218X,219X,220X,221X,222X,223X,225S,229X,230ILV,231FL
GU59515879867Italy23-Feb-2005genomic DNAunique BF recombinant12316L,14P,41T,91A,120S,180D,194S
GU59515283166Italy13-Jul-2005genomic DNAunique BF recombinant12316L,83M,84HQ,116N,120S,154K,171V,180D,217T,218CF
GU59515389072Italy22-Mar-2006genomic DNAunique BF recombinant12316L,27I,50S,54I,83L,86A,87Q,91IV,96L,98D,100K,120S,128D,140*K,142IV,148FV,154K,156GR,162K,170R,208G,225S

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