Genbank References: capsid (p24)

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Genbank References: capsid (p24)

Authors	Title	Citation	E-value	# in Gb	#Pts	ART	Source	Cloning	StudyType
Ho (2013)	Replication-competent non-induced proviruses in the latent reservoir increase barrier to HIV-1 cure	Cell. 2013 Oct 24;155(3):540-51	8.49e-170	125	8	ART	PBMC	SGS	Reservoir

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Accession	IsolateName	Country	Coll Date	MolType	Note	FirstAA	LastAA	MutList
KF526120	10CB1_32B5	USA	30-Nov-2010	genomic DNA	nonsense;subtype: B	1	231	6M,27I,83L,91T,120S,154K,178T,208G,225S
KF526122	10CB1_33A10	USA	30-Nov-2010	genomic DNA	intact non-induced;subtype: B	1	231	6M,27I,83L,91T,120S,154K,178T,208G,225S
KF526123	10CB1_33A2	USA	30-Nov-2010	genomic DNA	intact non-induced;subtype: B	1	231	6M,27I,83L,91T,120S,154K,178T,208G,225S
KF526124	10CB2_16F3	USA	30-Nov-2010	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6M,27I,41T,91T,120S,154K,178T,208G,225S
KF526125	10CB2_24G11	USA	30-Nov-2010	genomic DNA	internal deletion;subtype: B	1	231	6M,27I,41T,91T,120S,154K,178T,208G,225S
KF526126	10CB2_24G2	USA	30-Nov-2010	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6M,27I,41T,91T,120S,154K,178T,208G,225S
KF526128	10CB2_33B1	USA	30-Nov-2010	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6M,27I,41T,91T,120S,154K,178T,208G,225S
KF526129	10CB2_33B11	USA	30-Nov-2010	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6M,27I,41T,91T,120S,154K,178T,208G,225S
KF526130	10CB2_38A3	USA	30-Nov-2010	genomic DNA	internal deletion;subtype: B	1	231	6M,27I,41T,91T,120S,154K,178T,208G,225S
KF526131	10CB2_45A2	USA	30-Nov-2010	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6M,27I,41T,91T,120S,154K,178T,208G,225S
KF526132	10CB2_45B10	USA	30-Nov-2010	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6M,27I,41T,91T,120S,154K,178T,208G,225S
KF526133	10CB2_45B2	USA	30-Nov-2010	genomic DNA	internal deletion;subtype: B	1	231	6M,27I,41T,91T,120S,154K,178T,208G,225S
KF526134	10CB3_35B6	USA	30-Nov-2010	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6M,27I,41T,91T,120S,154K,178T,208G,225S
KF526135	10CB3_45C1	USA	30-Nov-2010	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6M,27I,41T,91T,120S,154K,178T,208G,225S
KF526136	10CB3_45C2	USA	30-Nov-2010	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6M,27I,41T,91T,120S,154K,178T,208G,225S
KF526137	10CB3_45C7	USA	30-Nov-2010	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6M,27I,41T,91T,120S,154K,178T,208G,225S
KF526138	10CB3_45D10	USA	30-Nov-2010	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6M,27I,41T,91T,120S,154K,178T,208G,225S
KF526139	10CB3_45D2	USA	30-Nov-2010	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6M,27I,41T,91T,120S,154K,178T,208G,225S
KF526141	10CB4_45E6	USA	30-Nov-2010	genomic DNA	packaging signal deletion;subtype: B	1	231	6M,27I,41T,91T,120S,154K,178T,208G,225S
KF526142	10CB5_41F11	USA	30-Nov-2010	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6M,27I,41T,91T,120S,154K,178T,208G,225S
KF526143	10CB5_41G1	USA	30-Nov-2010	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6M,27I,41T,91T,120S,154K,178T,208G,225S
KF526144	10CB5_41G11	USA	30-Nov-2010	genomic DNA	hypermutation;subtype: B	1	231	6M,10I,27I,29K,41T,76K,81N,91T,97K,113K,116E,120S,132K,133,137E,154K,173K,178T,184,197N,206E,208G,212K,213K,214I,225S
KF526145	10CB6_induced	USA	30-Nov-2010	genomic DNA	induced;subtype: B	1	231	6M,27I,41T,91T,120S,154K,178T,208G,225S
KF526149	10CB7_48B2	USA	30-Nov-2010	genomic DNA	frameshift deletion;subtype: B	1	231	6M,27I,91T,120S,148I,154K,178T,208G,225S
KF526152	10CB7_48C8	USA	30-Nov-2010	genomic DNA	internal deletion;subtype: B	1	231	6M,27I,91T,120S,148I,154K,178T,208G,225S
KF526154	10CB7_48F1	USA	30-Nov-2010	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6M,27I,91T,120S,154K,178T,208G,225S
KF526155	10CB7_48F10	USA	30-Nov-2010	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6M,27I,41T,91T,120S,154K,178T,208G,225S
KF526159	10CB7_48H11	USA	30-Nov-2010	genomic DNA	hypermutation;subtype: B	1	231	6M,18K,27I,29K,41T,81N,82K,91T,97K,120S,128K,154K,178T,184*,206R,208G,212K,214I,222E,223E,225S
KF526163	10CB7_48H7	USA	30-Nov-2010	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6M,27I,41T,91T,120S,154K,178T,208G,225S
KF526165	10TB2_17B12	USA	30-Nov-2010	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6M,27I,41T,91T,120S,154K,178T,208G,225S
KF526168	16CB1_20E1	USA	02-Mar-2011	genomic DNA	internal deletion;subtype: B	1	229	6L,15L,83L,120H,208G,226G,227R,228S,229I
KF526170	16CB1_20F1	USA	02-Mar-2011	genomic DNA	internal deletion;subtype: B	1	225	6L,15L,83L,120H,208G,222A,223S,225Q
KF526174	16CB1_22D2	USA	02-Mar-2011	genomic DNA	nonsense;subtype: B	1	231	6L,15L,83L,87Q,91V,116A,148V,180D,208G
KF526175	16CB1_22D9	USA	02-Mar-2011	genomic DNA	intact non-induced;subtype: B	1	231	6L,15L,83L,87Q,91V,116A,148V,180D,208G
KF526176	16CB1_22E5	USA	02-Mar-2011	genomic DNA	intact non-induced;subtype: B	1	231	6L,15L,83L,87Q,91V,116A,148V,180D,208G
KF526177	16CB1_7E10	USA	02-Mar-2011	genomic DNA	intact non-induced;subtype: B	1	231	6L,15L,83L,87Q,91V,116A,148V,180D,208G
KF526178	16CB1_7E12	USA	02-Mar-2011	genomic DNA	intact non-induced;subtype: B	1	231	6L,15L,83L,87Q,91V,116A,148V,180D,208G
KF526179	16CB1_7F3	USA	02-Mar-2011	genomic DNA	intact non-induced;subtype: B	1	231	6L,15L,83L,87Q,91V,116A,148V,180D,208G
KF526181	16CB3_induced	USA	02-Mar-2011	genomic DNA	induced;subtype: B	1	231	6L,15L,83L,116A,148V,180D,208G
KF526183	16CC4_5C5	USA	02-Mar-2011	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6L,15L,83L,116A,148V,180D,208G
KF526187	16CC6_B4	USA	02-Mar-2011	genomic DNA	nonsense;subtype: B	1	231	6L,15L,80,83L,87Q,91V,116A,117,148V,180D,208G
KF526188	16CC6_B8	USA	02-Mar-2011	genomic DNA	hypermutation;subtype: B	1	231	6L,15L,23,60E,80,83L,87Q,89R,91V,92T,100K,116A,117,127R,148V,156R,180D,184,208G,222R
KF526190	16CC6_D9	USA	02-Mar-2011	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6L,15L,83L,87Q,91V,116A,148V,180D,208G
KF526192	16TB1_11G2	USA	02-Mar-2011	genomic DNA	packaging signal deletion;subtype: B	1	231	6L,15L,83L,116A,208G
KF526193	16TB1_16-2	USA	02-Mar-2011	genomic DNA	hypermutation;subtype: B	1	231	6L,15L,46E,82K,83L,106E,116A,117,128K,132K,133,148V,152N,180D,184*,208G,214I,220E,222K
KF526194	16TB1_B3	USA	02-Mar-2011	genomic DNA	packaging signal deletion;subtype: B	1	231	6L,15L,83L,116A,208G
KF526195	16TB1_C10	USA	02-Mar-2011	genomic DNA	packaging signal deletion;subtype: B	1	231	6L,15L,83L,116A,208G
KF526196	16TB1_D4	USA	02-Mar-2011	genomic DNA	packaging signal deletion;subtype: B	1	231	6L,15L,83L,116A,208G
KF526197	16TB1_F10	USA	02-Mar-2011	genomic DNA	packaging signal deletion;subtype: B	1	231	6L,15L,83L,116A,208G
KF526198	16TB1_F2	USA	02-Mar-2011	genomic DNA	packaging signal deletion;subtype: B	1	231	6L,15L,83L,116A,208G
KF526199	16TB2_B4	USA	02-Mar-2011	genomic DNA	deletion junction not precisely defined;subtype: B	1	205	6L,15L,83L,116A,148V,180D
KF526201	16TB3_10C11	USA	02-Mar-2011	genomic DNA	intact non-induced;subtype: B	1	231	6L,15L,83L,116A,148V,180D,208G
KF526202	16TB4_24B12	USA	02-Mar-2011	genomic DNA	intact non-induced;subtype: B	1	231	6L,15L,83L,87Q,91V,116A,148V,180D,208G
KF526203	16TB4_24B3	USA	02-Mar-2011	genomic DNA	intact non-induced;subtype: B	1	231	6L,15L,83L,87Q,91V,116A,148V,180D,208G
KF526204	16TB4_3C12	USA	02-Mar-2011	genomic DNA	intact non-induced;subtype: B	1	231	6L,15L,83L,87Q,91V,116A,148V,180D,208G
KF526205	16TB4_3C6	USA	02-Mar-2011	genomic DNA	hypermutation;subtype: B	1	231	6L,15L,23,80,83L,87Q,91V,100K,116A,137R,148V,180D,208G,223R
KF526208	17CB2_4D7	USA	16-Mar-2011	genomic DNA	hypermutation;subtype: C	1	231	6L,14P,23,27I,41T,46R,71D,79D,80,83L,89R,91A,100K,101R,116A,120S,128D,137R,148V,154K,156R,169F,178A,180D,184*,187D,191T,206R,208E
KF526209	17CB2_4E3	USA	16-Mar-2011	genomic DNA	nonsense;subtype: C	1	231	6L,14P,27I,41T,71D,79D,83L,91A,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,191L,208G
KF526210	17CB2_C1	USA	16-Mar-2011	genomic DNA	intact non-induced;subtype: C	1	231	6L,14P,27I,41T,71D,79D,83L,91A,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,191L,208G
KF526211	17CB2_D3	USA	16-Mar-2011	genomic DNA	hypermutation;subtype: C	1	213	8R,14S,15L,27I,80,83L,117,120H,124V,148V,154K,156R,177C,178T,180D,184*,194S
KF526212	17CB6_induced	USA	16-Mar-2011	genomic DNA	induced;subtype: C	1	231	6L,14P,27I,41T,71D,79D,83L,91V,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,191L,208G
KF526213	17CB7_3F3	USA	16-Mar-2011	genomic DNA	intact non-induced;subtype: C	1	231	6L,14P,27I,41T,71D,79D,83L,91A,116A,120S,128D,148V,154K,169F,178A,180D,187D,191I,208G,210S
KF526214	17CB7_3G7	USA	16-Mar-2011	genomic DNA	intact non-induced;subtype: C	1	231	6L,14P,27I,41T,71D,79D,83L,91A,116A,120S,128D,148V,154K,169F,178A,180D,187D,191I,208G,210S
KF526215	17CB7_3G9	USA	16-Mar-2011	genomic DNA	hypermutation;subtype: C	1	214	8R,14S,15L,27I,80,83L,117,120H,124V,148V,154K,156R,177C,178T,180D,184*,194S
KF526216	17TB2_A6	USA	16-Mar-2011	genomic DNA	intact non-induced;subtype: C	1	231	6L,14P,27I,41T,71D,79D,83L,91A,116A,120S,128D,148V,154K,169F,178A,180D,187D,191I,208G,210S
KF526217	17TB4_2G10	USA	16-Mar-2011	genomic DNA	hypermutation;subtype: C	1	231	6L,14P,23,27I,41T,46R,71D,79D,80,83L,89R,91A,100K,101R,116A,120S,128D,137R,148V,154K,156R,169F,178A,180D,184*,187D,191T,206R,208E
KF526218	17TB4_2G2	USA	16-Mar-2011	genomic DNA	major splice donor mutation;subtype: C	1	231	6L,14P,27I,41T,71D,79D,83L,91V,116A,120S,128D,148V,154K,169F,178A,180D,187D,191T,208G
KF526219	17TB4_4F11	USA	16-Mar-2011	genomic DNA	internal deletion;subtype: C	1	231	6L,14P,27I,41T,71D,79D,83L,91A,116A,120S,128D,148V,154K,169F,178A,180D,187D,191T,208G
KF526220	17TB4_4F12	USA	16-Mar-2011	genomic DNA	internal deletion;subtype: C	1	231	6L,14P,27I,41T,71D,79D,83L,91A,98K,116A,120S,128D,148V,154K,169F,178A,180D,187D,191I,208G,210S
KF526221	17TB4_4F2	USA	16-Mar-2011	genomic DNA	internal deletion;subtype: C	1	231	6L,14P,27I,41T,71D,79D,83L,91A,116A,120S,128D,148V,154K,169F,178A,180D,187D,191T,208G
KF526222	17TB4_4F4	USA	16-Mar-2011	genomic DNA	internal deletion;subtype: C	1	231	6L,14P,27I,41T,71D,79D,83L,91A,116A,120S,128D,148V,154K,169F,178A,180D,187D,191T,208G
KF526223	17TB4_4F8	USA	16-Mar-2011	genomic DNA	internal deletion;subtype: C	1	231	6L,14P,27I,41T,71D,79D,83L,91A,116A,120S,128D,148V,154K,169F,178A,180D,187D,191T,208G
KF526224	17TB4_4F9	USA	16-Mar-2011	genomic DNA	deletion junction not precisely defined;subtype: C	8	231	14P,27I,41T,71D,79D,83L,91A,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,191L,208G
KF526225	17TB4_4G11	USA	16-Mar-2011	genomic DNA	intact non-induced;subtype: C	1	231	6L,14P,27I,41T,71D,79D,83L,91A,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,191L,208G
KF526226	17TB4_4G8	USA	16-Mar-2011	genomic DNA	insertion;subtype: C	1	231	6L,14P,27I,41T,71D,79D,83L,91A,116A,120S,128D,148V,154K,169F,178A,180D,187D,191I,208G,210S
KF526227	17TB4_E5	USA	16-Mar-2011	genomic DNA	intact non-induced;subtype: C	1	231	6L,14P,27I,41T,71D,79D,83L,91A,116A,120S,124V,128D,148V,154K,169F,178T,180D,187D,191L,208G
KF526228	19CB1_induced	USA	13-Apr-2011	genomic DNA	induced;subtype: B	1	231	6L,27I,33N,41A,83T,91V,98D,120S,132K,148V,178T,225S
KF526231	19CB5_7G8	USA	13-Apr-2011	genomic DNA	packaging signal deletion;subtype: B	1	231	6L,27I,33N,41A,83L,91V,98D,120S,132K,148V,178T,225S
KF526232	19CB5_9B4	USA	13-Apr-2011	genomic DNA	deletion junction not precisely defined;subtype: B	1	218	6L,27I,33N,41A,83T,91V,98D,120S,132K,148V,178T
KF526233	19CB5_9B5	USA	13-Apr-2011	genomic DNA	internal deletion;subtype: B	1	231	6L,27I,33N,41A,83T,91V,98D,120S,132K,148V,178T,225S
KF526236	19CB6_25C7	USA	13-Apr-2011	genomic DNA	intact non-induced;subtype: B	1	231	6L,27I,33N,41A,83T,91V,98D,120S,132K,148V,178T,225S
KF526245	19CC7_42B6	USA	13-Apr-2011	genomic DNA	major splice donor mutation;subtype: B	1	231	6L,27I,33N,41A,83T,87Q,91V,98D,120S,132K,148V,178T,225S
KF526251	19TB1_21C1	USA	13-Apr-2011	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6L,27I,33N,41A,83T,91V,98D,120S,132K,148V,178T,184*,225S
KF526249	19TB10_1E10	USA	13-Apr-2011	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6L,27I,33N,41A,83T,91V,98D,120S,132K,148V,178T,225S
KF526250	19TB10_1E9	USA	13-Apr-2011	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6L,27I,33N,41A,83T,91V,98D,120S,132K,148V,178T,225S
KF526253	19TB2_11E1	USA	13-Apr-2011	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6L,27I,33N,41A,83T,91V,98D,120S,132K,148V,178T,225S
KF526254	19TB2_19B3	USA	13-Apr-2011	genomic DNA	hypermutation;subtype: B	1	231	6L,27I,33N,41A,83T,91V,116A,120S,132K,148V,178T,225S
KF526255	19TB2_19B8	USA	13-Apr-2011	genomic DNA	packaging signal deletion;subtype: B	1	231	6L,27I,33N,41A,83T,91V,98D,120S,132K,148V,178T,225S
KF526257	19TB8_1C5	USA	13-Apr-2011	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6L,27I,33N,41A,83T,87Q,91V,98D,120S,132K,148V,178T,225S
KF526258	19TB8_1C8	USA	13-Apr-2011	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6L,27I,33N,41A,83T,87Q,91V,98D,120S,132K,148V,178T,225S
KF526261	20CB3_induced	USA	04-May-2011	genomic DNA	induced;subtype: B	1	231	83L,154K,194S,230I
KF526262	20CB4_36D12	USA	04-May-2011	genomic DNA	hypermutation;subtype: B	1	231	23,80,117,143K,167Q,184,194S,230I
KF526264	20CB4_42G8	USA	04-May-2011	genomic DNA	packaging signal deletion;subtype: B	1	231	194S,230I
KF526265	20CB4_46F1	USA	04-May-2011	genomic DNA	intact non-induced;subtype: B	1	231	194S,230I
KF526270	20CB5_46G3	USA	04-May-2011	genomic DNA	intact non-induced;subtype: B	1	231	83L,154K,194S,230I
KF526272	20CB6_47A4	USA	04-May-2011	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	83L,154K,194S,230I
KF526274	20CB6_47D2	USA	04-May-2011	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	83L,154K,194S,230I
KF526276	20CB7_43C6	USA	04-May-2011	genomic DNA	intact non-induced;subtype: B	1	231	194S,230I
KF526279	20CB7_47E12	USA	04-May-2011	genomic DNA	intact non-induced;subtype: B	1	231	194S,230I
KF526280	20CB7_47E5	USA	04-May-2011	genomic DNA	intact non-induced;subtype: B	1	231	194S,230I
KF526282	20TB1_33C3	USA	04-May-2011	genomic DNA	hypermutation;subtype: B	1	231	23,80,117,143K,167Q,184,194S,230I
KF526283	20TB1_33C9	USA	04-May-2011	genomic DNA	hypermutation;subtype: B	1	231	23,80,117,143K,167Q,184,194S,230I
KF526285	20TB1_33D4	USA	04-May-2011	genomic DNA	internal deletion;subtype: B	1	231	83L,154K,194S,230I
KF526287	20TB2_33E11	USA	04-May-2011	genomic DNA	intact non-induced;subtype: B	1	231	83L,154K,194S,230I
KF526289	20TB2_33E8	USA	04-May-2011	genomic DNA	hypermutation;subtype: B	1	231	23,80,117,143K,167Q,184,194S,230I
KF526291	20TB3_33G10	USA	04-May-2011	genomic DNA	hypermutation;subtype: B	1	231	23,61R,80,83L,97K,117,127R,137R,154K,162K,184,194S,206R,220R,222R,223R,230I
KF526292	20TB3_33G11	USA	04-May-2011	genomic DNA	hypermutation;subtype: B	1	231	23,80,117,143K,167Q,184,194S,230I
KF526293	20TB3_33G9	USA	04-May-2011	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	83L,154K,194S,230I
KF526298	22CB2_39G2	USA	11-Jul-2011	genomic DNA	packaging signal deletion;subtype: B	1	231	6L,15L,41T,83L,87Q,91V,96L,116A,120H,121T,136M,154K,178T
KF526299	22CB2_39G5	USA	11-Jul-2011	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6L,15L,41T,83L,87Q,91V,96L,116A,120H,121T,136M,154K,178T
KF526300	22CB2_43E6	USA	11-Jul-2011	genomic DNA	internal deletion;subtype: B	1	231	6L,15L,41T,83L,87Q,91V,96L,116A,120H,121T,136M,154K
KF526307	22CB6_21F1	USA	11-Jul-2011	genomic DNA	internal deletion;subtype: B	1	225	6L,15L,83L,120H,208G,222A,223S,225Q
KF526309	22CB7_19F9	USA	11-Jul-2011	genomic DNA	internal deletion;subtype: B	1	229	6L,15L,83L,120H,208G,226G,227R,228S,229I
KF526312	22CC9_induced	USA	11-Jul-2011	genomic DNA	induced;subtype: B	1	231	6L,15L,41T,83L,87Q,91V,96L,116A,120H,121T,136M,154K,171I,179H,180D,183K
KF526318	23CB4_49E8	USA	11-Jul-2011	genomic DNA	packaging signal deletion;subtype: B	1	231	6L,14P,16A,44A,54L,58A,86A,87Q,96I,110N,116T,180D
KF526323	23CB6_induced	USA	11-Jul-2011	genomic DNA	induced;subtype: B	1	231	6L,14P,16A,44A,54L,58A,86A,87Q,91V,96I,98D,110N,116T,180D,208G,225S
KF526324	9CB3_29B2	USA	16-Nov-2010	genomic DNA	nonsense;subtype: B	1	214	8R,14S,15L,27I,80,83L,117,120H,124V,148V,154K,156R,177C,178T,180D,184*,194S
KF526325	9CB4_29C1	USA	16-Nov-2010	genomic DNA	hypermutation;subtype: B	1	231	14S,15L,23,27I,60R,80,83L,89R,100K,117,120H,124V,133,143K,148V,154K,156R,177C,178T,180D,184*,194S,206R,222R
KF526326	9CC3_29E8	USA	16-Nov-2010	genomic DNA	hypermutation;subtype: B	1	231	10I,14S,15L,18K,23,27I,29K,46K,60R,80,83L,89R,97K,101K,106R,116R,117,120H,124V,127R,128K,133,148V,154K,156K,159K,165I,166N,167Q,177C,178T,180D,184*,194S,197N,206R,220K,222R,223R,229K
KF526327	9CC3_31E11	USA	16-Nov-2010	genomic DNA	hypermutation;subtype: B	1	231	10I,14S,15L,18K,23,27I,29K,46K,60R,80,83L,89R,97K,101K,106R,116R,117,120H,124V,127R,128K,133,148V,154K,156K,159K,165I,166N,167Q,177C,178T,180D,184*,194S,197N,206R,220K,222R,223R,229K
KF526328	9CC3_31E5	USA	16-Nov-2010	genomic DNA	hypermutation;subtype: B	1	231	14S,15L,27I,60R,80,83L,120H,124V,133,143K,148V,154K,156R,177C,178T,180D,184*,194S,220R,222R
KF526332	9TB1_E1	USA	16-Nov-2010	genomic DNA	deletion junction not precisely defined;subtype: B	1	231	6L,83L,120H,208G
KF526335	9TB1_H6	USA	16-Nov-2010	genomic DNA	hypermutation;subtype: B	1	231	10I,14S,15L,23,27I,60R,80,83L,89R,101R,116R,117,120H,124V,127R,128K,133,137E,148V,154K,156R,162K,167,177C,178T,180D,184,194S,206R,220R,222K,229K
KF526336	9TC3_27F6	USA	16-Nov-2010	genomic DNA	hypermutation;subtype: B	1	231	14S,15L,27I,82K,83L,96I,116E,118I,120H,124V,127E,128K,132K,133,148V,154K,177C,178T,180D,184,194S,206E,214I
KF526339	9TC4_31G6	USA	16-Nov-2010	genomic DNA	deletion junction not precisely defined;subtype: B	1	212	14S,15L,27I,83L,106R,120H,124V,148V,154K,177C,178T,180D,184*,194S

Genbank References: capsid (p24)

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