<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Steain (2016) HIV-1 sequence diversity and dual infections in Kenya AIDS Res Hum Retroviruses. 2005 Oct;21(10):882-5 5.29e-166 35 15 Naive PBMC Direct PCR Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
AY772952KenyaM115gaggenomic DNAPBMC's from HIV-infected womansubtype: D12316L,27I,57T,71D,83L,116A,120S,148V,154K,177G,180D,208G,230I
AY772953KenyaM104gaggenomic DNAPBMC's from HIV-infected womansubtype: A12316A,14T,15L,27I,58I,71D,83L,87Q,111P,115V,120S,148V,154K,169F,171A,178T,183G,187D,200S,208G
AY772954KenyaM133gaggenomic DNAPBMC's from HIV-infected womansubtype: A12316A,11I,14S,15L,27I,49S,50P,54M,58I,71D,83L,86I,92P,111P,120S,128D,148V,154K,169F,171A,178T,183G,191I,200S,203R,206R,207A,208G,212K
AY772955KenyaM141gaggenomic DNAPBMC's from HIV-infected womansubtype: A12316A,11I,14P,15L,27I,30R,54M,58I,59I,59I_GTTRKI*I*C*T**,71D,83L,92P,111P,120S,128D,148V,154K,169F,171A,178T,183G,200S,207A,208G
AY772956KenyaM150gaggenomic DNAPBMC's from HIV-infected womansubtype: D12316L,27I,29K,57H,83L,96V,120G,148V,180D,225S
AY772957KenyaM160gaggenomic DNAPBMC's from HIV-infected womansubtype: D12316L,27I,33R,57H,83L,116A,120S,148V,180D,225S
AY772958KenyaM178gaggenomic DNAPBMC's from HIV-infected womansubtype: A12316A,11I,14S,15L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,183G,200S,203R,207A,208G
AY772959KenyaM18gaggenomic DNAPBMC's from HIV-infected womansubtype: A/D12312V,6L,27I,71D,83L,91V,116A,123A,148V,154K,177G,180D,208G
AY772960KenyaM21_clone11genomic DNAPBMC's from HIV-infected womansubtype: D/A12316A,14S,15L,27I,54M,58I,83L,87Q,91V,110S,120S,136P,148V,180D,208G
AY772961KenyaM21_clone13genomic DNAPBMC's from HIV-infected womansubtype: D/A12316A,11I,14S,15L,23*,27I,28K,47T,54M,58I,80*,83L,87Q,91V,99L,110S,117*,120S,148V,156R,180D,184*,208G
AY772962KenyaM21_clone15genomic DNAPBMC's from HIV-infected womansubtype: D/A12316A,14S,15L,20S,27I,45D,54M,58I,66L,83L,87Q,91V,110S,115M,120S,148V,166H,180D,182R,186P,195V,203L,208G,212Q,215I,219P,220P
AY772963KenyaM21_clone17genomic DNAPBMC's from HIV-infected womansubtype: D/A12316A,14S,15L,27I,45D,54M,58I,62T,83L,87Q,91V,95R,110S,120S,132K,148V,149K,150F,167G,173K,180D,195D,197N,199E,202F,203L,208G,211F,212Q,213H,214I,219P,220A
AY772964KenyaM21_clone19genomic DNAPBMC's from HIV-infected womansubtype: D/A12316A,11M,14S,15L,27I,54M,58I,83L,87Q,91V,110S,115M,120S,148V,179R,180D,182R,208G,212K
AY772965KenyaM21_clone1genomic DNAPBMC's from HIV-infected womansubtype: D/A12316A,14S,15L,27I,45D,52V,54R,58I,83L,86M,87Q,91V,110S,120S,148V,180D,208G
AY772966KenyaM21_clone3genomic DNAPBMC's from HIV-infected womansubtype: D/A12316A,11I,14S,15L,23*,27I,28K,47T,54M,58I,80*,83L,87Q,91V,93S,110S,117*,120S,148V,156R,158E,180D,184*,208G
AY772967KenyaM21_clone8genomic DNAPBMC's from HIV-infected womansubtype: D/A12316A,14S,15L,27I,45D,54M,58I,71A,72P,73F,83L,85A,87Q,91V,108I,110S,119S,120G,148V,180D,208G
AY772968KenyaM21_ps1genomic DNAPBMC's from HIV-infected womansubtype: A12316A,11I,14S,15L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,183G,191I,200A,203R,207S,208G
AY772969KenyaM21_ps2genomic DNAPBMC's from HIV-infected womansubtype: A12316A,11I,14S,15L,27I,54M,58I,71D,83L,92P,111P,120S,128D,148V,154K,169F,178T,183G,191I,197N,200A,203R,205F,207S,208G,210P,211F,217P,221G,225A
AY772970KenyaM264_gaggenomic DNAPBMC's from HIV-infected womansubtype: A12316A,11I,14S,15L,27I,54M,58I,71D,79D,83L,86P,87Q,92P,96I,111P,116T,120S,148V,154K,169F,178T,181I,183S,200S,203R,207A,208G,230I
AY772971KenyaM369gaggenomic DNAPBMC's from HIV-infected womansubtype: A12306A,11I,14S,15L,27I,54M,58I,71D,83L,91V,92AP,111P,116AG,120G,128D,148V,154K,169F,178T,183G,191IV,200S,203R,207A,208G,221DEV,223*G,224HP
AY772972KenyaM381gaggenomic DNAPBMC's from HIV-infected womansubtype: A/D12316L,27I,63P,83L,120G,148V,180D
AY772973KenyaM389_clone17genomic DNAPBMC's from HIV-infected womansubtype: A212316A,41T,71D,92P,120S,148V,169F,178T,180D,187D,200S,203R,208G
AY772974KenyaM389_clone20genomic DNAPBMC's from HIV-infected womansubtype: A212316A,41T,71D,92P,120S,148V,169F,178T,180D,187D,200S,203R,208G
AY772975KenyaM389_clone22genomic DNAPBMC's from HIV-infected womansubtype: A212316A,41T,48P,71D,92P,120S,148V,169L,178T,180D,187D,200S,203R,208G
AY772976KenyaM389_clone35genomic DNAPBMC's from HIV-infected womansubtype: A212316A,41T,71D,92P,120S,148V,169F,178T,180D,187D,200S,203R,208G
AY772977KenyaM389_clone37genomic DNAPBMC's from HIV-infected womansubtype: D12316L,27I,83L,92V,96V,120G,148V,175G,180D,225S
AY772978KenyaM389_clone38genomic DNAPBMC's from HIV-infected womansubtype: A212316A,40L,41T,71D,92P,120S,148V,169F,178T,180D,187D,200S,203R,208G
AY772979KenyaM389_clone10genomic DNAPBMC's from HIV-infected womansubtype: D/A212316L,27I,31V,83L,96V,120G,148V,180D
AY772980KenyaM389_16genomic DNAPBMC's from HIV-infected womansubtype: D12316L,15V,27I,31V,83L,92V,96V,120G,132G,148V,180D,225S
AY772981KenyaM389_clone23genomic DNAPBMC's from HIV-infected womansubtype: D12316L,27I,83L,96V,120G,136P,148V,166N,175V,180D,225S
AY772982KenyaM389_clone9genomic DNAPBMC's from HIV-infected womansubtype: D12316L,27I,83L,96V,120G,148V,180D,210A,215V,225S
AY772983KenyaM389_clone5genomic DNAPBMC's from HIV-infected womansubtype: A212315K,6A,12R,41T,71D,92P,94R,120S,148V,169F,178T,180D,187D,196S,200S,203R,205F,208G
AY772984KenyaM389_clone11genomic DNAPBMC's from HIV-infected womansubtype: A2/D12316A,41T,71D,92P,108PT,120S,144K,148V,180D,225S
AY772985KenyaM439gaggenomic DNAPBMC's from HIV-infected womansubtype: A12315S,6A,11I,12Y,15L,27I,30R,31G,48A,54M,58I,71D,83L,92P,111P,120G,128D,148V,154K,169F,178T,183G,200S,203R,207T,208G
AY772986KenyaM428gaggenomic DNAPBMC's from HIV-infected womansubtype: A12316A,15V,54M,58I,71D,83L,87HQ,92P,120S,128D,148V,154K,169F,171A,178T,183G,200S,207T,208G,225S

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