| Accession | IsolateName | Country | Coll Date | Clone | MolType | Source | Note | FirstAA | LastAA | MutList |
|---|
| KT124420 | 2002-M0 | India | 26-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,15L,16T,27I,41T,71D,83L,86I,116A,120A,124V,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S |
| KT124421 | 2002-M12 | India | 26-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,15L,16T,27I,41T,71D,83L,86I,116A,120A,124V,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S |
| KT124422 | 2003-M6 | India | 26-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,15L,27I,41T,71D,83L,87P,96I,116A,120G,124V,148V,154K,169F,170R,178T,180D,187D,203R,208G,210S |
| KT124423 | 2004-M0 | India | 26-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,15L,27I,41T,71D,79D,83L,110N,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S |
| KT124424 | 2004-M12 | India | 26-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,31G,41T,71D,79D,83L,91V,110N,116A,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S |
| KT124425 | 2005-M0 | India | 26-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,91N,92V,116A,120S,124V,128D,154K,169F,178T,187D,203R,208G,225S |
| KT124426 | 2005-M12 | India | 26-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,91N,92V,116A,120S,124V,128D,154K,169F,178T,187D,203R,208G,217S,225S |
| KT124427 | 2005-M6 | India | 26-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,91N,92V,116A,120S,124V,128D,154K,169F,178T,187D,203R,208G,217S,225S |
| KT124428 | 2006-M0 | India | 26-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14S,15L,27I,36I,41T,71D,83L,91V,96L,110N,116A,120S,124V,128D,148V,154K,169F,171C,178T,180D,203R |
| KT124429 | 2007-M0 | India | 26-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,68I,71D,72A,79D,83L,86I,87P,88V,91L,96I,116A,120G,124V,136I,148V,154K,169F,170R,178T,180D,187D,203R,208G,225S |
| KT124430 | 2007-M12 | India | 26-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,68I,71D,72A,79D,83L,86I,87P,88V,91L,116A,120G,124V,136I,148V,154K,169F,170R,178T,180D,187D,203R,208G,225S |
| KT124431 | 2007-M6 | India | 26-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,68I,71D,72A,79D,83L,86I,87P,88V,91L,116A,120G,124V,136I,148V,154K,169F,170R,178T,180D,187D,203R,208G,225S |
| KT124432 | 2008-M0 | India | 26-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,15L,27I,41T,68I,71D,79D,83L,86A,91V,92Q,110N,116A,120G,124V,128D,154K,169F,178T,180D,187D,194S,203R,208G,225S |
| KT124433 | 2008-M6 | India | 26-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,15L,27I,41T,71D,83L,86A,91V,92Q,110N,116A,120G,124V,128D,154K,169F,178T,180D,187D,194S,203R,208G,225S |
| KT124434 | 2010-M0 | India | 26-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,91V,96L,115V,116A,124V,128D,136M,140R,148V,154K,156E,169F,178T,180D,187D,203R,210S,225S |
| KT124435 | 2010-M12 | India | 26-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14S,15L,27I,39L,41T,71D,83L,91V,96L,116A,124V,128D,136M,148V,169F,178T,180D,187D,203R,210S,225S |
| KT124436 | 2010-M6 | India | 26-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,91V,96L,116A,124V,128D,136M,148V,154K,169F,178T,180D,187D,203R,210S,225S |
| KT124437 | 2011-M6 | India | 26-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 14P,15L,33N,41T,71D,83L,87P,116A,120A,121T,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S |
| KT124438 | 2012-M0 | India | 28-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,36I,41T,71D,79D,83L,91N,116A,124V,148V,154K,169F,178T,187D,203R,208G,210S |
| KT124439 | 2012-M6 | India | 28-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,36I,41T,71D,79D,83L,91N,116A,124V,148V,154K,169F,178T,187D,203R,208G,210S |
| KT124440 | 2014-M0 | India | 28-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,91V,110N,116A,120S,124V,154K,169F,178T,187D,203R,208G,225S |
| KT124441 | 2014-M6 | India | 28-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,35Q,41T,71D,83L,86A,91V,110N,116A,120S,124V,154K,169F,178T,187D,203R,208G,225S |
| KT124442 | 2015-M0 | India | 28-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,96I,110N,116A,120G,124V,128D,154K,169F,178T,187D,203R,208G,225S |
| KT124443 | 2015-M6 | India | 28-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14S,15L,27I,41T,71D,83L,110N,116A,120S,124V,154K,169F,178T,187D,203R,208G,225S |
| KT124444 | 2016-M0 | India | 28-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,16A,27I,41T,71D,79D,83L,116A,120S,124V,154K,169F,178T,187D,203R,208G,225S |
| KT124445 | 2016-M12 | India | 28-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,86A,87Q,91V,110N,116A,120S,124V,154K,169F,178T,187D,203R,208G,225S |
| KT124446 | 2016-M6 | India | 28-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,16A,27I,41T,71D,79D,83L,116A,120S,124V,154K,169F,178T,187D,203R,208G,225S |
| KT124447 | 2017-M0 | India | 28-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,33T,36I,41T,71D,83L,91N,110N,116A,120S,124V,148V,154K,169F,171P,178T,187D,203R,208G |
| KT124448 | 2017-M12 | India | 28-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,91N,110N,116A,120G,124V,148V,154K,169F,173G,177G,178T,187D,203R,208G |
| KT124449 | 2017-M6 | India | 28-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,91N,110N,116A,120G,124V,148V,154K,169F,171A,177G,178T,187D,201V,207S,208G,225S |
| KT124450 | 2018-M0 | India | 28-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6M,14P,15L,16T,27I,41T,71D,83L,87P,96I,98D,116T,120G,128D,148V,154K,169F,178T,187D,200N,203R,208G,210S,225S |
| KT124451 | 2018-M12 | India | 28-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,86A,87Q,96I,98D,116T,120G,128D,136M,148V,154K,169F,178T,187D,200N,203R,208G,209V,210S,211V,218F,225R,226P |
| KT124452 | 2018-M6 | India | 28-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6M,14P,27I,41T,71D,83L,87P,96I,98D,116T,120G,128D,148V,154K,169F,178T,187D,200N,203R,208G,210S |
| KT124453 | 2019-M0 | India | 28-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15M,27I,36I,41T,58A,71D,79D,83L,108S,110N,116A,120S,124V,138F,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S |
| KT124454 | 2020-M0 | India | 28-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,15L,41T,71D,83L,87P,96I,98D,116T,124V,154K,169F,178T,180D,187D,203R,208G,225S |
| KT124455 | 2020-M12 | India | 28-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 15L,41T,68I,71D,83L,110N,116A,120S,124V,148V,149G,169F,178T,180D,203R,208G |
| KT124456 | 2020-M6 | India | 28-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,41T,68I,71D,83L,110N,116A,120S,124V,148V,149G,169F,178T,180D,203R |
| KT124457 | 2022-M6 | India | 28-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,41T,71D,83I,116A,120G,124V,148A,154K,169F,170R,178T,180D,187D,203R,208G,225S |
| KT124458 | 2025-M0 | India | 14-Oct-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,41T,71D,83L,86I,115V,116A,120G,124V,128D,154K,169F,178T,187D,199R,208G |
| KT124459 | 2025-M12 | India | 14-Oct-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,86I,115V,116A,120G,124V,128D,154K,160S,169F,178T,187D,208G |
| KT124460 | 2025-M6 | India | 14-Oct-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,41T,71D,83L,86I,115V,116A,120G,124V,128D,154K,169F,178T,187D,199R,208G |
| KT124461 | 2026-M0 | India | 14-Oct-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,27I,28K,36I,41T,45Q,71D,83I,91A,116A,120G,124V,128D,148V,154K,169F,178T,187D,200I,203R,204G,208G |
| KT124462 | 2026-M12 | India | 14-Oct-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,27I,36I,41T,71D,83I,91A,116A,120G,124V,128D,148V,154K,169F,178T,187D,200I,203R,204G,208G |
| KT124463 | 2026-M6 | India | 14-Oct-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,27I,36I,41T,71D,83I,91A,116A,120G,124V,128D,148V,154K,169F,178T,187D,200I,203R,204G,208G |
| KT124464 | 2028-M0 | India | 14-Oct-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,27I,41T,71D,83L,87P,96I,116A,120S,124V,148I,154K,169F,178T,180D,187D,203R,208G,210S,225S |
| KT124465 | 2028-M12 | India | 14-Oct-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,27I,41T,71D,83L,87P,91F,96I,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,208G,210S,225S |
| KT124466 | 2032-M0 | India | 14-Oct-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,36I,41T,71D,79D,83L,91V,110N,116A,120G,124V,148V,154K,169F,178T,187D,203R,208G,210S |
| KT124467 | 2032-M12 | India | 14-Oct-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,36I,41T,71D,79D,83L,110N,116A,120G,124V,148V,154K,169F,178T,180D,187D,203R,208G,210S |
| KT124468 | 2032-M6 | India | 14-Oct-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,36I,41T,71D,79D,83L,91V,110N,116A,120G,124V,148V,154K,169F,178T,180D,187D,203R,208G,210S |
| KT124469 | 2036-M12 | India | 14-Oct-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,27I,41T,71D,83L,86I,87P,96I,116T,124V,148V,154K,169F,178T,183G,187D,203R,208G,210S |
| KT124470 | 2036-M6 | India | 14-Oct-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,27I,41T,71D,83L,86I,87P,96I,116T,124V,148V,154K,169F,178T,183G,187D,203R,208G,210S |
| KT124471 | 2037-M0 | India | 14-Oct-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,116N,120G,124V,154K,169F,178T,187D,203R,208G,210S,225S |
| KT124472 | 2037-M6 | India | 14-Oct-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,113D,116N,120G,148A,154K,169F,178T,187D,203R,208G,210S,225S |
| KT124473 | 2038-M6 | India | 31-Oct-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,116A,124V,148V,154K,169F,178T,187D,203R,208G |
| KT124474 | 2039-M0 | India | 31-Oct-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,107S,116A,120A,124V,128D,154K,169F,170R,178T,187D,203R,208G,225S |
| KT124475 | 2039-M6 | India | 31-Oct-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,107S,116A,120A,124V,128D,154K,169F,170R,178T,187D,203R,208G,225S |
| KT124476 | 2041-M0 | India | 31-Oct-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14S,15L,27I,41T,71D,83L,87Q,110N,116A,120S,124V,154K,169F,178T,187D,203R,208G |
| KT124477 | 2041-M12 | India | 31-Oct-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14S,15L,27I,41T,71D,83L,87Q,110N,116A,120S,124V,154K,169F,178T,187D,203R,208G |
| KT124478 | 2042-M0 | India | 02-Dec-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,36I,41T,71D,83M,87Q,110N,116A,120S,124V,148V,154K,169F,178T,187D,203R,208G,210S,225S |
| KT152633 | T001-M0 | India | 26-Nov-2010 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,45D,71D,83L,91A,116A,120G,124V,143K,146C,148V,169F,178T,187D,208G,225S |
| KP890700 | T002-M0 | India | 06-Dec-2010 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,86L,87Q,91V,110N,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S |
| KP890701 | T002-M12 | India | 05-Jan-2012 | | genomic RNA | | subtype: C | 1 | 231 | 6P,15L,27I,41T,71D,83L,86L,87Q,91V,110N,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S |
| KP890702 | T002-M30 | India | 15-May-2013 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,86L,87Q,91V,110N,116A,120S,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S |
| KP890703 | T002-M6 | India | 17-Jun-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,86L,87Q,91V,110N,116A,120G,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S |
| KP890704 | T002M0-G1 | India | 06-Dec-2010 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,29G,41T,71D,83L,86L,87Q,91V,110N,116A,120G,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S |
| KP890705 | T002M0-G3 | India | 06-Dec-2010 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,85L,86L,87Q,91V,110N,116A,120G,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S |
| KP890706 | T002M0-G4 | India | 06-Dec-2010 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,74D,83L,86L,87Q,91V,110N,116A,120G,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S |
| KP890707 | T002M0-G5 | India | 06-Dec-2010 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,72I,83L,86L,87Q,91V,110N,116A,120G,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S |
| KP890708 | T002M0-G6 | India | 06-Dec-2010 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,86L,87Q,91V,110N,116A,120G,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S |
| KP890709 | T002M0-G7 | India | 06-Dec-2010 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,19A,27I,41T,71D,83L,86L,87Q,91V,110N,116A,120G,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S |
| KP890710 | T002M0-G8 | India | 06-Dec-2010 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,49S,71D,83L,86L,87Q,91V,110N,116A,120G,124V,148V,154K,169F,178T,180D,187D,203R,208G,212*,225S |
| KP890711 | T002M0-G9 | India | 06-Dec-2010 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,86L,87Q,91V,110N,116A,120G,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S |
| KT152634 | T005-M0 | India | 20-Dec-2010 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14N,58A,71D,83L,86Q,87Q,116A,120S,124V,128D,154K,169F,178T,180D,187D,208G |
| KP890712 | T006-M0 | India | 29-Dec-2010 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83I,116A,124V,148V,169F,178T,187D,203R,208G,210S |
| KP890713 | T006-M12 | India | 03-Feb-2012 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,86I,87P,96I,116A,124V,148V,154K,169F,178T,187D,203R,208G,210S |
| KP890714 | T006-M18 | India | 23-Aug-2012 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,86I,116A,124V,148V,169F,178T,187D,203R,208G,210S |
| KP890715 | T006-M6 | India | 07-Jul-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,86I,87P,116A,124V,148V,154K,169F,178T,187D,200N,203R,208G,210S |
| KP890716 | T006M0-G2 | India | 29-Dec-2010 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83I,116A,124V,148V,154K,169F,178T,187D,203R,208G,210S |
| KP890717 | T006M0-G3 | India | 07-Jul-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83I,100M,116A,124V,148V,154K,169F,177V,178T,187D,203R,208G,210S |
| KP890762 | T006M0-G5 | India | 07-Jul-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83I,116A,124V,148V,154K,169F,178T,187D,203R,208G,210S |
| KP890718 | T006M0-G6 | India | 07-Jul-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83I,116A,124V,148V,154K,169F,178T,187D,203R,208G,210S |
| KP890719 | T006M0-G7 | India | 07-Jul-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83I,104M,115M,116A,124V,148V,154K,169F,178T,187D,203R,208G,210S |
| KP890720 | T006M0-G8 | India | 07-Jul-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,54S,71D,83I,116A,124V,148V,154K,169F,178T,187D,203R,208G,210S |
| KP890721 | T006M0-G9 | India | 07-Jul-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,54S,71D,83I,116A,124V,148V,154K,169F,178T,187D,203R,208G,210S |
| KP890722 | T008-M0 | India | 20-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,86A,87P,96I,116T,128D,148V,154K,169F,170R,178T,180D,187D,203R,208G |
| KP890723 | T008-M12 | India | 20-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,87P,96I,116T,128D,148V,154K,169F,178T,180D,187D,203R,208G |
| KP890724 | T008-M18 | India | 20-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,87P,96I,116T,120S,128D,148V,154K,169F,170R,178T,180D,187D,203R,208G |
| KP890725 | T008-M24 | India | 20-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,87P,96I,116T,120S,128D,148V,154K,169F,170R,178T,180D,187D,203R,208G |
| KP890726 | T008-M6 | India | 20-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,87P,96I,116T,128D,148V,154K,169F,178T,180D,187D,203R,208G |
| KP890727 | T008M0-G1 | India | 20-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,87P,96I,116T,128D,148V,154K,169F,178T,180D,187D,203R,208G |
| KP890728 | T008M0-G10 | India | 20-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,86A,87Q,96I,116T,120S,128D,148V,154K,169F,170R,178T,180D,187D,203R,208G |
| KP890729 | T008M0-G11 | India | 20-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,87P,96I,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G,209G |
| KP890730 | T008M0-G12 | India | 20-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,87P,96I,116T,128D,148V,154K,169F,178T,180D,187D,203R,208G |
| KP890731 | T008M0-G13 | India | 20-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,87P,96I,116T,128D,148V,154K,169F,178T,180D,187D,203R,208G |
| KP890732 | T008M0-G14 | India | 20-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,87P,96I,116T,120S,128D,148V,154K,169F,178T,180D,187D,203R,208G |
| KP890733 | T008M0-G2 | India | 20-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,87P,96I,116T,128D,148V,154K,169F,178T,180D,187D,188A,203R,208G |
| KP890734 | T008M0-G4 | India | 20-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,86A,87Q,96I,116T,120S,128D,135T,148V,154K,169F,170R,178T,180D,187D,203R,208G,230I |
| KP890735 | T008M0-G5 | India | 20-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,57S,71D,83L,86A,87Q,96I,116T,120S,128D,148V,154K,169F,170R,178T,180D,187D,203R,208G,220E |
| KP890736 | T008M0-G6 | India | 20-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,87P,96I,116T,128D,148V,154K,169F,170R,178T,180D,186A,187D,203R,208G,224S |
| KP890737 | T008M0-G7 | India | 20-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,86A,87Q,96I,116T,120S,128D,148V,154K,169F,170R,178T,180D,187D,203R,208G |
| KP890738 | T008M0-G9 | India | 20-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,87P,96I,116T,128D,148V,154K,169F,178T,180D,187D,203R,208G |
| KP890739 | T009-M0 | India | 24-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,15L,41T,71D,83L,86I,92Q,110N,116A,120G,128D,154K,169F,178T,180D,187D,203R,208G,225S |
| KP890740 | T009-M12 | India | 24-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,15L,41T,71D,83L,86I,92Q,110N,116A,120G,128D,154K,169F,178T,180D,187D,203R,208G,225S |
| KP890741 | T009M0-G2 | India | 24-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,15L,41T,71D,83L,86I,92Q,110N,116A,120G,126A,128D,154K,167W,169F,178T,180D,187D,203R,208G,225S |
| KP890742 | T009M0-G4 | India | 24-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,15L,41T,47T,71D,83L,86I,92Q,110N,116A,120G,128D,154K,169F,178T,180D,187D,188A,203R,208G,225S |
| KP890743 | T009M0-G6 | India | 24-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14L,15L,41T,71D,83L,86I,92Q,110N,116A,120G,128D,154K,167W,169F,178T,180D,187D,203R,208G,225S |
| KP890744 | T009M0-G7 | India | 24-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,15L,41T,71D,83L,86I,92Q,110N,116A,120G,128D,154K,169F,178T,180D,187D,203R,208G,225S |
| KP890745 | T009M0-G8 | India | 24-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,15L,41T,71D,83L,86I,92Q,110N,116A,120G,128D,154K,169F,178T,180D,187D,203R,208G,225S |
| KP890746 | T011-M0 | India | 29-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,86L,116T,120S,124V,128D,154K,169F,178T,194S,203R,208G |
| KP890747 | T011-M12 | India | 29-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,86L,102R,116A,120S,124V,128D,154K,169F,178T,194S,203R,208G |
| KP890748 | T011-M18 | India | 29-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,86L,116T,120S,124V,128D,154K,169F,178T,194S,203R,208G |
| KP890749 | T011-M24 | India | 29-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,86L,116T,120S,124V,128D,154K,169F,178T,191I,194S,203R,208G |
| KP890750 | T011-M6 | India | 29-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,86L,116T,120S,124V,128D,154K,169F,178T,194S,203R,208G |
| KP890751 | T011M0-G12 | India | 29-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,77V,83L,86L,116T,120S,124V,128D,132G,154K,169F,178T,194S,203R,208G |
| KP890752 | T011M0-G13 | India | 29-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,87P,96I,116T,128D,148V,154K,169F,178T,180D,187D,203R,208G |
| KP890753 | T011M0-G14 | India | 29-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,48P,71D,83L,86L,103G,116T,120S,124V,128D,154K,169F,178T,194S,203R,208G |
| KP890754 | T011M0-G15 | India | 29-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,86L,116T,120S,124V,128D,154K,169F,178T,194S,203R,206*,208G |
| KP890755 | T011M0-G16 | India | 29-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,86L,116T,120S,124V,128D,154K,169F,178T,194S,203R,208G,220E |
| KP890756 | T011M0-G17 | India | 29-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,86L,116T,118T,120S,124V,128D,154K,169F,178T,194S,203R,208G,226R |
| KP890757 | T011M0-G18 | India | 29-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,86L,116T,120S,124V,128D,154K,169F,178T,194S,203R,208G,226R |
| KP890758 | T011M0-G2 | India | 29-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,86L,116T,120S,124V,128D,154K,169F,178T,194S,203R,208G |
| KP890759 | T011M0-G4 | India | 29-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 4R,6L,15L,27I,41T,51G,71D,83L,86L,116T,120S,124V,128D,154K,169F,178T,194S,203R,208G |
| KP890760 | T011M0-G5 | India | 29-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,86L,116T,120S,124V,128D,154K,169F,178T,188A,194S,203R,208G |
| KP890761 | T011M0-G7 | India | 29-Jan-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,86L,116T,120S,124V,128D,154K,169F,178T,194S,203R,208G |
| KT152635 | T013-M0 | India | 02-Dec-2010 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,79D,83L,110S,116A,120S,124V,128D,148V,169F,178T,180D,187D,203R,208G,225S |
| KT152636 | T013-M12 | India | 23-Feb-2013 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,79D,83L,110S,116A,120S,124V,128D,148V,169F,178T,180D,187D,203R,208G,225S |
| KT152638 | T014-M0 | India | 16-Feb-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,91V,110N,116A,120G,124V,128D,154K,169F,178T,187D,203R,208G,225S |
| KT152639 | T014-M12 | India | 03-Oct-2012 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,87Q,91V,110N,116A,120G,124V,128D,154K,169F,178T,187D,203R,208G,225S |
| KT152640 | T014-M18 | India | 11-Aug-2012 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,83L,91V,110N,116A,120G,124V,128D,154K,169F,178T,187D,203R,208G,225S |
| KT152642 | T014-M6 | India | 13-Aug-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,22T,27I,41T,71D,83L,91V,110N,116A,120G,124V,128D,154K,169F,178T,187D,203R,208G,225S |
| KT152643 | T015-M0 | India | 25-Mar-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,110N,116A,120G,124V,148V,154K,169F,170R,178T,180D,187D,203R,208G,210S,225S |
| KT152644 | T015-M12 | | | | genomic RNA | | | 1 | 231 | 6L,15L,27I,41T,71D,83L,110N,116A,120G,124V,148V,154K,169F,170R,178T,180D,187D,203R,208G,225S |
| KT152645 | T015-M18 | India | 26-Oct-2012 | | genomic RNA | | subtype: C | 1 | 231 | 5K,6L,15L,27I,41T,71D,83L,110N,116A,120G,124V,148V,154K,169F,170R,178T,180D,187D,203R,208G,210S,225S |
| KT152647 | T015-M6 | India | 22-Aug-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,110N,116A,120G,124V,148V,154K,169F,170R,178T,180D,187D,203R,208G,210S,225S |
| KT152648 | T016-M0 | India | 09-Aug-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,58A,71D,83L,96L,110N,116A,124V,129Y,148V,154K,169F,178T,180D,187D,207Q,208G,225S |
| KT152649 | T016-M12 | India | 03-Oct-2012 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,58A,71D,83L,91V,96L,110N,116A,124V,129Y,148V,154K,169F,178T,180D,187D,207Q,208G,225S |
| KT152650 | T017-M0 | India | 27-Aug-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,79D,83L,86I,116A,120S,124V,128D,148V,169F,178T,180D,187D,203R,208G |
| KT152651 | T017-M12 | India | 11-Dec-2012 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,50R,71D,83L,86I,116A,120S,124V,128D,148V,169F,173I,178T,180D,187D,203R,208G |
| KT152652 | T017-M6 | India | 23-Feb-2012 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,27I,41T,71D,79D,83L,86I,116A,120S,124V,128D,148V,169F,178T,180D,187D,203R,208G |
| KT152653 | T018-M0 | India | 29-Aug-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,110N,116A,120G,124V,148V,154K,169F,178T,180D,187D,203R,210S,225S |
| KT152654 | T018-M12 | India | 13-Sep-2012 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,110N,116A,120G,124V,148V,154K,169F,178T,180D,187D,203R,210S,225S |
| KT152655 | T018-M18 | India | 28-Mar-2013 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,110N,116A,120G,124V,148V,154K,169F,178T,180D,187D,203R,210S,225S |
| KT152656 | T018-M24 | India | 20-Sep-2012 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,110N,116A,120G,124V,148V,169F,178T,180D,187D,203R,210S,225S |
| KT152657 | T018-M6 | India | 20-Mar-2012 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,110N,116A,120G,124V,148V,154K,169F,178T,180D,187D,203R,210S,225S |
| KT152658 | T019-M0 | India | 19-Sep-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,27I,41T,71D,72A,83T,116A,120A,124V,148V,154K,169F,178T,180D,187D,203R,208G,225S |
| KT152659 | T020-M0 | India | 14-Oct-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,15L,27I,41T,71D,83L,110S,116A,120G,124V,128D,148V,154K,169F,170R,180D,187D,190M,203R,208G,210S,225S |
| KT152660 | T022-M0 | India | 19-Dec-2011 | | genomic RNA | | subtype: C | 1 | 231 | 6H,15L,27I,41T,68I,71D,72V,83L,86T,92Q,96I,110N,116T,120S,128D,148V,169F,178T,180D,187D,199R,208G,225S |
| KT152661 | T022-M12 | India | 08-Oct-2012 | | genomic RNA | | subtype: C | 1 | 231 | 6H,15L,27I,41T,68I,71D,72V,83L,86T,92Q,96I,110N,116T,120G,128D,148V,169F,178T,180D,187D,199R,208G,225S |
| KT152662 | T022-M18 | India | 10-May-2013 | | genomic RNA | | subtype: C | 1 | 231 | 6H,15L,27I,41T,68I,71D,72V,83L,86T,92Q,96I,110N,116T,120S,128D,148V,154K,169F,178T,180D,187D,199R,208G,225S |
| KT152663 | T022-M6 | India | 07-May-2012 | | genomic RNA | | subtype: C | 1 | 231 | 6H,14P,15L,27I,41T,68I,71D,72V,83L,86T,92Q,96I,110N,116T,120G,128D,148V,169F,178T,180D,187D,199R,208G,225S |
| KT152664 | T024-M18 | India | 08-Oct-2012 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,59I,71D,83L,91P,110N,112S,116A,120S,124V,128D,148V,149N,154K,169F,180D,194S,203R,225S |
| KT152665 | T025-M0 | India | 03-Jul-2012 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,71D,83L,86A,87P,91L,110N,116A,120G,124V,136M,148V,149G,154K,169F,178T,187D,203R,208G,225S |
| KT152666 | T028-M0 | India | 19-Mar-2012 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14P,15L,27I,41T,68I,71D,79D,83L,96I,116A,120S,124V,148V,169F,178T,180D,187D,208G |
| KT152667 | T028-M12 | India | 14-Apr-2013 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,68I,71D,79D,83L,116A,120S,124V,148V,169F,178T,180D,187D,208G |
| KT152668 | T028-M6 | India | 13-Sep-2012 | | genomic RNA | | subtype: C | 1 | 231 | 6L,15L,27I,41T,68I,71D,79D,83L,96I,116A,120S,124V,148V,154K,169F,178T,180D,187D,208G |
| KT152669 | T029-M12 | India | 28-May-2013 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14S,15L,27I,41T,71D,83L,91V,96L,110N,116A,120S,124V,128D,154K,169F,187D,203R,208G |
| KT152670 | T029-M18 | India | 23-Nov-2013 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14S,15L,27I,41T,71D,83L,86I,91V,110N,116A,120G,124V,128D,154K,169F,187D,203R,208G |
| KT152671 | T029-M6 | India | 28-Apr-2012 | | genomic RNA | | subtype: C | 1 | 231 | 6L,14T,15L,27I,41T,71D,83L,91V,96L,110N,116A,120S,124V,128D,154K,169F,178T,187D,203R,208G |
| KT152672 | T030-M0 | India | 03-May-2012 | | genomic RNA | | subtype: C | 1 | 231 | 6L,27I,36I,41T,71D,83L,92V,93Q,96L,110N,120S,128D,148V,154K,169F,178T,180D,187D,191T,203R,208G |
| KT152673 | T030-M6 | India | 08-Jan-2013 | | genomic RNA | | subtype: C | 1 | 231 | 6L,27I,36I,41T,71D,83L,92V,93Q,96L,110N,120S,128D,148V,154K,169F,178T,180D,187D,191T,203R,208G |