Genbank References: capsid (p24)

HOME Genotype-Rx Genotype-Pheno Genotype-Clinical hivdb program

Genbank References: capsid (p24)

Authors	Title	Citation	E-value	# in Gb	#Pts	ART	Source	Cloning	StudyType
Han (2016)	Molecular Epidemiology of HIV in Liaoning Province, Northeastern China: Complex Findings in a Low Prevalence Area	Unpublished	1.69e-166	148					Unpublished

Download sequences

Accession	IsolateName	Country	Coll Date	MolType	Source	Note	FirstAA	LastAA	MutList
EF122505	00CNLN01	China		genomic DNA	paid blood donor	subtype: CRF07-BC	1	231	6L,14P,68I,71D,83L,108I,116A,120G,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
EF122548	00CNLN02	China		genomic DNA	blood transfusion recipient	subtype: B'	1	231	6L,14P,79D,83L,120S,148S,180D,208G,225S,230I
EF122506	00CNLN03	China		genomic DNA	dentistry operation	infected in Burkina Faso;subtype: CRF06-cpx	1	231	6A,14P,15M,27I,54M,58I,71D,83T,92P,96I,120G,128D,148V,169F,178T,183G,187D,203R,208G,210S
EF122526	00CNLN04	China		genomic RNA	injecting drug user	subtype: CRF07-BC	1	231	6L,14P,18T,37L,68I,71D,83L,116A,120G,124V,128D,154K,169F,178T,180D,187D,188A,203R,208G,210S,211I,225S
EF122507	00CNLN05	China		genomic RNA	injecting drug user/heterosexual	sexual partnar of 00CNLN07;subtype: CRF08	1	231	6L,14P,15L,41T,71D,83L,91V,96V,116T,154K,169F,178T,180D,187D,188A,203R,210S,225S
EF122508	00CNLN07	China		genomic RNA	injecting drug user/blood transfusionrecipient/heterosexual	subtype: CRF08	1	231	6L,14P,15L,27I,28Q,41T,71D,77G,83L,91V,96V,107N,111F,116A,154K,169F,171V,178T,180D,187D,188A,203R,210S,225S
EF122509	00CNLN08	China		genomic RNA	male homosexual	subtype: B'	1	231	6L,14P,15L,83L,91V,148I,154K,180D,230I
EF122510	00CNLN10	China		genomic RNA	paid blood donor	subtype: B'	1	231	6L,14P,83L,120H,180D,225S,230I
EF122549	00CNLN11	China		genomic RNA	heterosexual	wife of CNLN10;subtype: B'	1	231	6L,14P,83L,120H,180D,225S,230I
EF122511	00CNLN12	China		genomic RNA	heterosexual	subtype: B'	1	231	6L,14P,83L,91V,180D,225S,230I
EF122563	00CNLN13	China		genomic RNA	heterosexual	infected in Africa;subtype: A	1	231	6A,15V,27I,30R,54M,58I,71D,91A,120S,128D,148V,154K,169F,171A,177G,180D,203R,204G,208G,210S
EF122512	00CNLN14	China		genomic RNA	heterosexual	wife of 00CNLN13;subtype: A	1	231	6A,15V,27I,30R,54M,58I,71D,91A,120S,128D,148V,154K,169F,171A,177G,180D,203R,204G,208G,229K
EF122513	00CNLN16	China		genomic DNA	paid blood donor	subtype: B'	1	231	6L,14P,41T,78V,83L,91V,106R,120S,180D,183T,210S
EF122561	01CNLN15	China		genomic DNA	mother to child	child of 00CNLN13 and 00CNLN14;subtype: A	1	231	6A,15V,27I,30R,54M,58I,71D,91A,120S,128D,148V,154K,169F,171V,177G,180D,194S,203R,204G,208G,210S
EF122569	01CNLN18	China		genomic RNA	heterosexual	subtype: B'	1	231	6L,14P,35D,83L,91V,120H,128D,148S,180D,230I
EF122547	01CNLN20	China		genomic DNA	heterosexual	subtype: B	1	231	6L,14P,15L,36I,41T,83M,91V,148V,154K,180D,208G,225S
EF122514	01CNLN21	China		genomic DNA	paid blood donor	subtype: B'	1	231	6L,14P,27I,44A,83L,91V,148V,180D,208Q,225S,230I
EF122515	02CNLN23	China		genomic RNA	injecting drug user	subtype: CRF07-BC	1	231	6L,14P,68I,71D,79D,83L,116A,120G,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
EF122516	02CNLN24	China		genomic RNA	paid blood donor	subtype: B'	1	231	6L,16T,83L,91V,110N,120S,136M,148V,180D,225S,230I
EF122556	02CNLN25	China		genomic RNA	heterosexual	wife of C02CNLN25;subtype: B'	1	231	6L,14P,16T,41T,83L,91V,120S,154K,180D,210S,225S,230I
EF122517	02CNLN26	China		genomic RNA	heterosexual	subtype: B'	1	231	6L,14P,44A,83L,91V,148V,180D
EF122518	02CNLN27	China		genomic RNA	heterosexual	infected in Kampuchea;subtype: CRF01-AE	1	231	6T,15L,31G,33N,54M,58I,83T,92P,96I,148V,178T,188A,200S,207T,208G,225S
EF122552	02CNLN29	China		genomic DNA	heterosexual	husband of 02CNLN30;subtype: B'	1	231	6L,14P,83L,180D,225S,230I
EF122519	02CNLN30	China		genomic RNA	paid blood donor	subtype: B'	1	231	6L,14P,83L,91P,180D,213A,225S,230I
EF122583	02CNLN31	China		genomic RNA	paid blood donor	subtype: B'	1	231	6L,14P,83L,91A,171S,180D,184R,185L,186P,225S,230I
EF122576	02CNLN32	China		genomic RNA	heterosexual	subtype: URF-06B	8	231	12Y,15L,36I,54I,58V,71D,87Q,90L,91L,94V,111V,115V,120S,131R,148S,154K,169F,180D,187D,191I,203R,225S
EF122520	02CNLN33	China		genomic RNA	heterosexual	subtype: CRF01-AE	1	231	6A,9H,14S,15L,31G,33N,54M,58I,92P,120S,124V,128D,148V,178T,200S,207T,208G,225S
EF122522	02CNLN34	China		genomic RNA	heterosexual	infected in Africa;subtype: B	1	231	6L,83L,112A,116A,118T,208G
EF122523	02CNLN35	China		genomic RNA	blood transfusion recipient	infected in Nigeria;subtype: G	1	231	6A,15L,27I,30N,41T,71D,83L,86P,87Q,92P,96I,110N,116A,120S,146C,148V,154K,169F,178T,187D,188S,207Q,208G,225S
EF122521	02CNLN36	China		genomic RNA	heterosexual	subtype: CRF01-AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,128D,178T,200S,207T,208G,225S
EF122568	02CNLN37	China		genomic RNA	blood transfusion recipient	subtype: B'	1	231	6L,14P,44A,83L,148V,180D,225S,230I
EF122524	02CNLN40	China		genomic RNA	heterosexual	husband of 03CNLN39;subtype: CRF01-AE	1	231	6A,14P,15L,30R,31G,33N,47T,54M,58I,68I,79K,90R,92P,128D,148V,149G,178T,188A,200S,207T,208G
EF122525	02CNLN41	China		genomic DNA	injecting drug user	subtype: CRF07-BC	1	231	6L,14S,15L,68I,71D,83L,94N,96I,116T,120S,124V,128D,154K,169F,178T,180D,187D,188A,203R,208G,210S,211I,225S
EF122527	02CNLN42	China		genomic RNA	heterosexual	subtype: URF-01B'	1	231	6L,14P,92P,120S,128D,148V,178T,203R,207T,208G,225S
EF122528	02CNLN43	China		genomic RNA	heterosexual	subtype: CRF07-BC	1	231	6M,68I,71D,83L,91V,116A,120S,124V,128D,154K,169F,178T,187D,188S,203R,208G,210S,211I,225S
EF122529	02CNLN44	China		genomic DNA	blood transfusion recipient	subtype: B'	1	231	6L,14P,30N,41T,57Y,83L,91V,120S,180D,230I
EF122565	03CNLN45	China		genomic DNA	heterosexual	subtype: CRF-07	1	231	6L,68I,71D,83L,116A,120G,124V,154K,162S,169F,178T,180D,187D,203R,208G,210S,211I,225S
EF122530	03CNLN47	China		genomic DNA	heterosexual	subtype: CRF01-AE	1	231	6A,14P,15M,31G,33N,41T,54M,58I,79D,83A,92P,128D,135V,148V,178T,200S,203R,207T,208G,225S
EF122584	03CNLN48	China		genomic DNA	blood transfusion recipient	subtype: B'	1	231	6L,14P,83L,91V,180D,225S,230I
EF122550	03CNLN49	China		genomic RNA	heterosexual	wife of 03CNLN48;subtype: B'	1	231	6L,14P,83L,180D,225S,230I
EF122551	03CNLN50	China		genomic DNA	heterosexual	sexual partner of 03CNLN48;subtype: B'	1	231	6L,8R,14S,15L,83L,91V,180D,225S,230I
EF122531	03CNLN51	China		genomic DNA	heterosexual	subtype: CRF08-BC	1	231	6L,14P,15L,41T,71D,83L,91V,116N,120S,154K,169F,178T,180D,187D,203R,208G,210S
EF122532	03CNLN52	China		genomic RNA	heterosexual	subtype: CRF01-AE	1	231	6A,14P,15V,20W,31G,33N,54M,58I,92P,120S,128D,148V,149G,200S,207T,208G,225S
EF122564	03CNLN53	China		genomic DNA	heterosexual	subtype: B	1	231	1G,2V,6R,27I,40C,41P,63H,68I,78V,83L,89V,91V,98D,120S,128D,180D,207T,208G,225S
EF122580	03CNLN54	China		genomic DNA	paid blood donor	subtype: B'	18	231	83L,91V,120S,180D,187K,225S,230I
EF122555	03CNLN55	China		genomic DNA	paid blood donor	subtype: B'	1	231	6L,14P,76K,83L,91V,180D,199R
EF122533	03CNLN58	China		genomic DNA	blood transfusion recipient	subtype: B'	1	231	6L,14S,15L,83L,91V,98D,120S,180D,188A,225S
EF122554	03CNLN59	China		genomic DNA	male homosexual	subtype: CRF01-AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,149G,178T,200S,207T,208G
EF122559	04CNLN120	China		genomic DNA	paid blood donor	subtype: B'	1	231	6L,14S,15L,27I,83L,91V,148V,180D,194AS,230I
EF122585	04CNLN121	China		genomic DNA	paid blood donor	subtype: B'	1	231	6L,14P,41T,83L,91V,120S,123A,154K,180D,199R,225S,230I
EF122502	04CNLN124	China		genomic RNA	paid blood donor	subtype: B'	1	231	6L,14T,15M,27I,83L,91V,96L,120H,154K,180D
EF122503	04CNLN127	China		genomic DNA	paid blood donor	subtype: B'	1	231	6L,7P,14P,79D,83L,91V,154K,180D
EF122546	04CNLN129	China		genomic DNA	paid blood donor	subtype: B'	1	231	6L,14P,36I,83L,91V,180D,225S,230I
EF122504	04CNLN130	China		genomic DNA	paid blood donor	subtype: B'	1	231	6L,14P,83L,120S,180D,203R,210S
EF122577	04CNLN136	China		genomic DNA	paid blood donor	subtype: B'	6	231	6F,7R,17T,71D,83L,177C,180D,187D,230I
EF122570	04CNLN137	China		genomic DNA	paid blood donor	subtype: B'	1	231	6L,14P,83L,91V,148I,180D,225S,230I
EF122581	04CNLN139	China		genomic DNA	paid blood donor	subtype: B'	1	231	6L,14P,71D,79D,83L,91V,180D,210S,229KR
EF122572	04CNLN140	China		genomic DNA	paid blood donor	subtype: B'	1	231	2L,6L,14P,17T,41T,83L,91V,180D,225S
EF122553	04CNLN145	China		genomic DNA	paid blood donor	subtype: B'	1	231	1PT,6L,14P,33N,44A,83L,91V,120S,148V,180D,230I
EF122571	04CNLN146	China		genomic DNA	paid blood donor	subtype: B'	1	231	5K,6P,14P,41T,83L,86P,87Q,91L,180D,199R
EF122562	04CNLN147	China		genomic DNA	paid blood donor	subtype: B'	1	231	6L,14P,44A,83L,87Q,91V,98D,148V,180D,225S,230I
EF122574	04CNLN60	China		genomic RNA	heterosexual	subtype: CRF-08	1	231	6L,14P,15L,41T,71D,83L,91V,96V,110N,116A,146C,153V,154K,169F,170R,171I,178T,180D,187D,203R,210S,225S
EF122534	04CNLN61	China		genomic RNA	heterosexual	subtype: CRF01-AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120S,128D,148V,178T,200S,207A,208G,225S
EF122535	04CNLN62	China		genomic RNA	injecting drug user	subtype: CRF01-AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,213A,225S
EF122573	04CNLN63	China		genomic RNA	paid blood donor	subtype: B'	1	231	6L,14P,17T,44A,83L,91V,110N,116A,120S,148V,180D,225S,230I
EF122536	04CNLN64	China		genomic RNA	heterosexual	subtype: CRF01-AE	1	231	6A,14P,15L,31G,33N,54M,58I,83A,92P,128D,148V,149G,178T,200S,207T,208G,213A,225S
EF122575	04CNLN65	China		genomic RNA	heterosexual	subtype: B'	1	231	6L,14P,27I,41V,69I,83L,91V
EF122537	04CNLN66	China		genomic RNA	heterosexual	subtype: CRF01-AE	1	231	6A,14P,15L,31G,33N,54M,58I,78V,92P,120S,128D,148V,178T,200S,207T,208G,213A,225S
EF122538	04CNLN67	China		genomic DNA	heterosexual	subtype: B'	1	231	6L,14P,83L,91V,180D,187K,225S,230I
EF122582	04CNLN68	China		genomic DNA	paid blood donor	subtype: B'	1	231	6L,14S,15L,83L,91V,148I,154K,180D,230I
EF122560	04CNLN69	China		genomic RNA	heterosexual	infected in Russia;subtype: URF-0301	1	231	6A,11T,15M,27I,41T,54M,58I,71D,86A,87Q,91F,92P,93A,120S,169F,178T,180D,207S,208G
EF122539	04CNLN71	China		genomic RNA	heterosexual	subtype: C	1	231	6L,14P,27I,41T,71D,83L,116A,120A,123A,124V,148V,154K,169F,170R,171V,178T,180D,203R,225S
EF122567	04CNLN72	China		genomic DNA	paid blood donor	subtype: B'	1	231	6L,15L,83L,91P,98D,120S,148V,180D,230I
EF122557	04CNLN73	China		genomic DNA	heterosexual	subtype: B'	1	231	6L,14P,41T,83L,96I,116T,123A,180D,203R,210S,225S,230I
EF122540	04CNLN74	China		genomic DNA	heterosexual	subtype: CRF08-BC	1	231	6L,14P,15L,41T,71D,83L,87Q,91V,98D,120S,169F,178T,180D,187D,203R,208G,225S
EF122541	04CNLN76	China		genomic RNA	heterosexual	subtype: CRF01-AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G,225S
EF122542	04CNLN77	China		genomic RNA	heterosexual	subtype: CRF01-AE	1	231	6A,14P,15L,31G,33N,41T,54M,58I,92P,128D,148V,149G,154K,178T,187Q,200S,203R,208G,225S
EF122543	04CNLN78	China		genomic RNA	heterosexual/BT	subtype: CRF01-AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,110N,120S,128D,148V,200S,207T,208G,225S
EF122544	04CNLN79	China		genomic RNA	heterosexual/BT	subtype: CRF07-BC	1	231	6L,14P,68I,71D,83L,116A,120G,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
EF122566	04CNLN80	China		genomic RNA	heterosexual	subtype: B	1	231	6F,15L,41T,91V,120S,180D,199R,207A,208G,225S
EF122545	04CNLN81	China		genomic RNA	blood transfusion recipient	subtype: B'	1	231	6F,14P,44A,83L,91V,148V,180D,225S,230I
FJ531405	05LN087	China	2005	genomic RNA		subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
FJ531406	05LN090	China	2005	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,116A,128D,148V,178T,200S,207T,208G,225S
FJ531381	05LN091	China	2005	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,116A,128D,148V,178T,200S,207T,208G,225S
FJ531407	05LN092	China	2005	genomic RNA		subtype: CRF01_AE	1	231	6A,11T,14S,15L,31G,33N,54M,58I,92P,98K,104V,120S,128D,148V,180D,200S,207T,208G,225S
FJ531382	05LN093	China	2005	genomic RNA		subtype: CRF08_BC	1	231	6L,14P,15L,41T,71D,83L,91V,96I,116T,120S,169F,178T,187D,203R,208G,210S,225S
FJ531391	05LN094	China	2005	genomic RNA		subtype: CRF01_AE	1	206	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,206R
FJ531392	05LN096	China	2005	genomic RNA		subtype: B	1	204	6L,14P,44A,83M,87Q,98D,120S,154K,180D
FJ531393	05LN097	China	2005	genomic RNA		subtype: CRF01_AE	1	206	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,149G,200S,206R
FJ531408	06LN103	China	2006	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,71D,79D,92P,128D,148V,149G,200S,207A,208G,225S
FJ531449	06LN104	China	2006	genomic RNA		subtype: CRF01_AE	1	231	6L,14P,44A,83L,148V,180D,207T,208G,225S
FJ531409	06LN105	China	2006	genomic RNA		subtype: CRF01_AE	1	231	6A,11T,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,180D,203R,207T,208G,225S
FJ531447	06LN106	China	2006	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,149G,199R,200S,207T,208G,225S
FJ531410	06LN107	China	2006	genomic RNA		subtype: B	1	231	6L,27I,41T,83L,91N,92P,154K,194S,208G,230I
FJ531383	06LN108	China	2006	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,149G,178T,200FS,207T,208G,225S
FJ531411	06LN109	China	2006	genomic RNA		subtype: CRF01_AE	1	231	6A,11I,14S,15L,31G,33N,48A,54M,58I,83T,92P,128D,148V,178T,200S,207T,208G,225S
FJ531412	06LN111	China	2006	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,83L,92P,128D,148V,149G,200S,207T,208G,225S
FJ531413	06LN112	China	2006	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,149G,200S,207T,208G,225S
FJ531414	06LN113	China	2006	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,79D,92P,96L,128D,148V,178T,200S,207T,208G
FJ531415	06LN114	China	2006	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,149G,200S,207T,208G,225S
FJ531416	06LN115	China	2006	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,79D,83A,92P,120S,148V,178T,200S,207T,208G,225S
FJ531417	06LN116	China	2006	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15L,18KR,31G,33N,54M,58I,83L,92P,128D,148V,149G,200S,207T,208G,225S
FJ531452	06LN117	China	2006	genomic RNA		subtype: B	1	204	83L,112A,116A,124V,136M
FJ531384	06LN119	China	2006	genomic RNA		subtype: B	1	231	83L,112A,116A,124V,136M
FJ531418	06LN121	China	2006	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,116A,128D,148V,178T,200S,207T,208G,225S
FJ531419	06LN122	China	2006	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,92P,128D,148V,149G,178T,200S,207T,208G,225S
FJ531420	06LN123	China	2006	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,87Q,92P,96L,148V,149G,200S,207T,208G,225S
FJ531421	06LN124	China	2006	genomic RNA		subtype: CRF01_AE	1	231	6A,11T,14S,15L,31G,33N,48A,54M,58I,79D,92P,120S,128D,148V,200S,207T,208G,225S
FJ531422	06LN125	China	2006	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G
FJ531423	06LN126	China	2006	genomic RNA		subtype: B	1	231	6L,41T,71D,83L,91N,92P,154K,180D,194S,207T,208G,225S
FJ531424	07LN128	China	2007	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,201IMRS,207T,208G
FJ531385	07LN129	China	2007	genomic RNA		subtype: B	1	231	6L,15L,27I,41T,68I,83L,91V,116A,120S,128D,148I,180D,187D,225S
FJ531450	07LN131	China	2007	genomic RNA		subtype: CRF07_BC	1	231	6M,13N,14P,68I,71D,83L,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I
FJ531425	07LN132	China	2007	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,83A,92P,128D,148V,149G,178T,200S,207T,208G,210S,225S
FJ531386	07LN133	China	2007	genomic RNA		subtype: B	1	231	6L,41T,83L,91N,92P,154K,180D,194S
FJ531426	07LN134	China	2007	genomic RNA		subtype: CRF07_BC	1	231	6L,14P,41T,68I,71D,83L,116T,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211V,225S
FJ531387	07LN135	China	2007	genomic RNA		subtype: B	1	231	6L,41T,83L,87Q,120S,180D,210S
FJ531427	07LN136	China	2007	genomic RNA		subtype: CRF07_BC	1	231	6IL,14P,68I,71D,83L,116T,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,225S
FJ531428	07LN138	China	2007	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,87Q,128D,148V,149G,199R,200S,207T,208G,225S
FJ531448	07LN143	China	2007	genomic RNA		subtype: CRF01_AE	1	231	6A,31G,33N,54M,58I,79D,83A,92P,128D,148V,178T,200S,207T,208G,225S
FJ531446	07LN144	China	2007	genomic RNA		subtype: CRF01_AE	1	231	6A,15L,31G,33N,54M,58I,78S,79D,83A,92P,120S,148V,178T,200S,207T,208G,225S
FJ531388	07LN149	China	2007	genomic RNA		subtype: B	1	231	6L,14P,44A,83L,87P,136M,154K,178T,225S
FJ531451	07LN150	China	2007	genomic RNA		subtype: B'	1	231	6L,14P,41T,83L,91V,120S,180D,199KR,206EG,225GS,230I
FJ531429	07LN153	China	2007	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,120S,121T,148V,178T,200S,207T,208G,225S
FJ531430	07LN154	China	2007	genomic RNA		subtype: CRF01_AE	1	231	6T,14S,15L,31G,33N,54M,58I,94N,120S,128D,148V,180D,200S,207T,208G,225S
FJ531395	07LN160	China	2007	genomic RNA		subtype: CRF01_AE	1	202	6A,14S,15L,31G,33N,54M,58I,87Q,92P,120S,123A,128D,148V,180D,200S
FJ531431	07LN175	China	2007	genomic RNA		subtype: CRF01_AE	1	231	6V,14P,15L,31G,33N,54M,58I,83L,92P,121T,128D,148V,178T,200S,207T,208G,225S
FJ531432	07LN176	China	2007	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,132M,148V,178T,200S,207T,208G,225S
FJ531433	07LN178	China	2007	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,92P,128D,148I,178T,200S,207T,208G
FJ531434	07LN179	China	2007	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,91A,92P,120S,128D,148V,149G,199R,200S,207S,208G,225S
FJ531389	07LN182	China	2007	genomic RNA		subtype: B	1	231	6L,14P,27I,41T,83L,87Q,91V,96I,110N,116A,120H,124V,154K,180D,210S,225S
FJ531435	07LN184	China	2007	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,31G,33N,54M,58I,83T,92P,116A,123S,128D,148V,178T,200S,207T,208G,225S
FJ531436	07LN187	China	2007	genomic RNA		subtype: CRF01_AE	1	231	6A,11T,14S,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207T,208G,225S
FJ531442	07SY023	China	2007	genomic RNA		subtype: CRF01_AE	1	231	6A,13S,14P,15L,31G,33N,54M,58I,92P,128D,178T,200S,207T,208G,225S
FJ531390	07SY035	China	2007	genomic RNA		subtype: B	1	231	6L,15L,41T,83L,87Q,120S,180D,210S
FJ531443	07SY041	China	2007	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,78S,83T,92P,128D,148V,178T,200S,207T,208G,225S
FJ531444	07SY123	China	2007	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,92P,120S,121T,128D,148V,178T,200S,207T,208G,225S
FJ531445	07SY147	China	2007	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15V,27I,31G,33N,54M,58I,83G,92P,120S,128D,148V,178T,200S,207T,208G,225S
FJ531437	08LN190	China	2008	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,116A,120G,128D,148V,149G,178T,200S,207T,208G,225S
FJ531438	08LN191	China	2008	genomic RNA		subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,120S,123A,128D,148V,178T,200S,207T,208G,225S
FJ531439	08LN194	China	2008	genomic RNA		subtype: CRF01_AE	1	231	6A,14S,15L,31G,33N,54M,58I,87Q,92P,96L,128D,148V,178T,200S,207T,208G,225S
FJ531400	08LN196	China	2008	genomic RNA		subtype: CRF01_AE	1	204	6A,14P,15L,31G,33N,54M,58I,71D,78V,83L,92P,128D,148V,149G,204S
FJ531440	08LN197	China	2008	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15L,31G,33N,54M,58I,87Q,92P,96L,148V,149G,200S,207T,208G,225S
FJ531401	08LN198	China	2008	genomic RNA		subtype: CRF01_AE	1	206	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,204S
FJ531402	08LN199	China	2008	genomic RNA		subtype: CRF01_AE	1	205	6A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148V,178T,204S
FJ531403	08LN200	China	2008	genomic RNA		subtype: B	1	204	6L,15L,83L,148V,180D
FJ531441	08LN203	China	2008	genomic RNA		subtype: CRF01_AE	1	231	6A,14P,15V,27I,31G,33N,54M,58I,78V,92P,120S,128D,148V,178T,200S,207T,208G
FJ531404	08LN209	China	2008	genomic RNA		subtype: B	1	204	6L,41T,83L,120S,180D

Genbank References: capsid (p24)

Database

Resources

Team