<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb		#PtsARTSourceCloningStudyType
Guan (2021) Multiple HIV-1 subtypes were found circulating in Jiangmen District of Guangdong, China J Med Virol. 2020 Mar 1. 4.29e-156 146 146 Naive Plasma Direct PCR Molecular epidemiology

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AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
MN966048EP004China2018genomic DNA12066L,11I,14P,41T,68I,71D,83L,86A,87Q,91H,92P,93A,96L,98D,116A,120S,121T,124V,128D,154K,169F,178T,180D,187D,203R
MN966049EP005China2018genomic DNA12076A,11I,14P,15L,31G,33N,54M,58I,92P,110N,111I,120G,123A,148V,178T,200S,203R,207T
MN966050EP006China2018genomic DNA12096A,14P,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S,207I,208G
MN966051EP007China2018genomic DNA12106A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,178T,200S,207T,208G
MN966052EP010China2018genomic DNA12076L,83L,120H
MN966053EP011China2018genomic DNA12106L,14P,15L,41T,71D,83L,116A,120A,154K,169F,178T,180D,187D,203R,208G
MN966054EP012China2018genomic DNA12056A,14P,15L,31G,33N,54M,58I,68I,92P,110N,123A,128D,146R,148V,154K,178T,200S
MN966055EP014China2018genomic DNA12056A,14P,15L,31G,33N,54M,58I,68I,92P,110N,123A,128D,146R,148V,154K,178T,200S
MN966056HS001China2018genomic DNA12106A,14P,15L,31G,33N,54M,58I,92P,96I,128D,200S,207T,208G
MN966057HS003China2018genomic DNA12076A,14P,15V,31G,33N,54M,58I,92P,110N,120S,128D,148V,178T,200S,207T
MN966058HS004China2018genomic DNA12076A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T
MN966059HS005China2018genomic DNA12056A,15V,31G,33N,54M,58I,78V,83T,87Q,92P,96I,116A,120S,128D,148V,178T,183T,200A
MN966060HS006China2018genomic DNA12094H,6A,14P,15V,31G,33N,54M,58I,79D,83T,86A,87Q,91F,92P,96I,110N,116A,120G,148V,178T,200S,207T,208G
MN966061HS007China2018genomic DNA12056A,15V,31G,33N,54M,58I,83T,87Q,92P,96I,110N,116A,128D,148V,178T,183S,200S
MN966062HS008China2018genomic DNA12056A,14P,15V,31G,33N,54M,58I,79D,83T,87Q,91F,92P,96L,98D,116A,128D,154K,178T,200S
MN966063HS009China2018genomic DNA12066A,14P,15V,31G,33N,44A,54M,58I,79D,83T,87Q,92P,96I,110N,116T,148V,154K,178T,200S
MN966064HS010China2018genomic DNA12096A,14P,15V,31G,33N,54M,58I,83T,87Q,91F,92P,96L,110N,116A,120H,128D,148V,149G,204S,207T,208G
MW262862JM.jm08China2019genomic DNA121014P,68I,71D,83L,91P,116A,118I,120G,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S
MW262868JM.pj102China2019genomic DNA12136L,15L,68I,71D,83L,86L,116A,120A,124V,128D,154K,169F,171C,178T,180D,187D,203R,208G,210S,211I
MW262867JM.pj103China2019genomic DNA12073I,6A,14P,15L,31G,33N,54M,58I,92P,120S,123A,148V,178T,200S,207T
MW262866JM.pj105China2019genomic DNA12076M,41T,83L,110N,116A,120S,199R
MW262865JM.pj106China2019genomic DNA12116L,15L,68I,71D,83L,86L,116A,120A,124V,128D,154K,169F,171C,178T,180D,187D,203R,208G,210S,211I
MW262859JM.pj107China2019genomic DNA12076A,14P,31G,33N,54M,58I,79D,83T,92P,96I,116A,128D,148V,178T,204S,207T
MW262864JM.pj108China2019genomic DNA12026T,15L,31G,33N,54M,58I,92P,120S,123S,148V,178T,200S
MW262863JM.pj109China2019genomic DNA12156A,14S,15L,31G,33N,54M,58I,83T,92P,120S,128D,148V,178T,200S,207T,208G
MW262857JM.pj120China2019genomic DNA121814P,68I,71D,83L,91P,110N,116A,120A,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I,218M
MW262856JM.pj121China2019genomic DNA12076A,15V,31G,33N,54M,58I,83T,86A,87Q,91F,92P,93A,96L,116A,120H,128D,148V,149G,204G,207T
MW262855JM.pj122China2019genomic DNA12106A,10Y,14P,15V,31G,33N,48S,54M,58I,64G,83I,87Q,92P,120S,128D,148V,178T,200S,207T,208G
MW262854JM.pj126China2019genomic DNA12093I,6L,13S,14T,41T,71D,83L,91V,96L,116A,120A,123A,124V,128D,148A,154K,169F,178T,180D,187D,203R,208G
MW262861JM.pj56China2019genomic DNA12096A,13S,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207S,208G
MW262860JM.pj86China2019genomic DNA12096A,10A,11I,14P,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,110N,116A,128D,148V,204S,207T,208G
MW262853JM.TS059China2019genomic DNA120914P,56P,68I,71D,91V,112P,116A,120S,121T,124V,128D,154K,169F,178T,180D,187D,203R,208G
MW262852JM.TS070China2019genomic DNA12116L,14P,68I,71D,79D,83T,91V,96I,110N,116T,120G,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I
MW262851JM.TS112China2019genomic DNA12126A,14S,15L,31G,33N,54M,58I,83L,92P,120S,128D,148V,178T,200S,207Q,208G
MW262849JM.xh67China2019genomic DNA12106A,14P,15L,31G,33N,54M,58I,87Q,92P,120H,128D,148V,178T,200S,207T,208G
MN966065jm01China2018genomic DNA12056A,14P,15V,27I,31G,33N,54M,58I,91V,92P,128D,148V,178T,200S
MN966068jm05China2018genomic DNA12046L,83L,120H
MN966069jm06China2018genomic DNA12076A,14P,15L,31G,33N,54M,58I,92P,128D,178T,200S,207T
MN966070jm07China2018genomic DNA120714P,68I,71D,83L,91P,116A,118I,120G,124V,128D,154K,169F,178T,180D,187D,203R
MN966073jm11China2018genomic DNA12136L,83L,120H,208G
MN966075jm48China2018genomic DNA120814P,68I,71D,83L,91V,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G
MN966076kp01China2018genomic DNA12106A,14P,15V,31G,33N,54M,58I,92P,120S,123A,128D,148V,178T,200S,207T,208G,210Y
MN966077kp02China2018genomic DNA12066A,14P,15L,31G,33N,54M,58I,92P,120G,123A,128D,178T,200S
MN966079kp04China2018genomic DNA12066L,14P,41T,68I,71D,83L,116A,120S,124V,128D,135V,154K,169F,178T,180D,187D,191I,203R
MN966081pj03China2018genomic DNA12096L,14P,68I,71D,83L,91V,96V,116A,120G,124V,128D,154K,169F,178T,180D,187D,203R,208G
MN966083pj06China2018genomic DNA12076A,14P,15V,31G,33N,54M,58I,86A,87Q,92P,96L,120S,128D,148V,149G,200S,207T
MN966086pj09China2018genomic DNA12066L,14P,68I,71D,79D,83L,91N,92P,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R
MN966088pj101China2018genomic DNA12056L,83L,120H
MN966089pj11China2018genomic DNA12076L,14P,41T,68I,71D,83L,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R
MN966092pj16China2018genomic DNA12156A,14S,31G,33N,54M,58I,92P,120S,128D,178T,200S,207T,208G
MN966093pj17China2019genomic DNA12076L,14P,15L,41T,59I,71D,83L,91V,120S,148V,154K,169F,171V,178T,180D,203R
MN966094pj18China2018genomic DNA12066A,11I,14P,15L,31G,33N,54M,58I,87Q,92P,96L,128D,147A,148V,162K,178T,200S
MN966095pj19China2018genomic DNA12096A,11T,14S,15L,31G,33N,54M,58I,91A,92P,120G,123A,128D,148V,154K,178T,200S,207T,208G
MN966096pj23China2018genomic DNA12046L,14P,41T,68I,71D,83L,110N,116A,120S,124V,128D,135V,154K,169F,178T,180D,187D,203R
MN966097pj25China2018genomic DNA12033I,6L,41T,68I,71D,116A,120A,123A,124V,128D,154K,169F,178T,180D,187D,203R
MN966099pj27China2018genomic DNA12106A,14S,15L,31G,33N,54M,58I,92P,120S,123A,128D,148V,169H,178T,200S,207T,208G
MN966100pj28China2018genomic DNA12076L,14P,31S,71D,83L,116A,120S,124V,128D,154K,169F,178T,180D,187D,200N,203R
MN966102pj30China2018genomic DNA12096L,14P,71D,83L,116A,118I,120G,123S,128D,154K,169F,178T,187D,203R,208G
MN966104pj34China2018genomic DNA12096A,14P,15V,31G,33N,54M,58I,92P,120S,128D,148I,178T,200S,207T,208G
MN966106pj36China2018genomic DNA12036A,11I,14P,41T,71D,83L,86A,87Q,91V,98D,110N,116A,120S,148I,154K,169F,178T,180D,187D,203R
MN966108pj38China2018genomic DNA12116L,68I,71D,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I
MN966109pj39China2018genomic DNA12116A,13S,14P,15L,31G,33N,54M,58I,83L,92P,110N,116A,120G,123A,128D,148V,178T,200S,207T,208G
MN966113pj44China2018genomic DNA12106A,14P,15L,31G,33N,54M,58I,92P,120S,123S,128D,148V,178T,200S,207T,208G
MN966114pj45China2018genomic DNA12066L,15L,41T,68I,71D,91V,96I,116T,120S,124V,154K,169F,178T,180D,187D,203R
MN966116pj47China2018genomic DNA12166A,14P,15V,27I,31G,33N,54M,58I,83L,92P,128D,148A,178T,200S,207T,208G
MN966117pj48China2018genomic DNA12076A,14P,15L,31G,33N,54M,58I,92P,120G,128D,148V,178T,200S,207T
MN966118pj49China2018genomic DNA12096A,14P,15L,31G,33N,54M,58I,92P,120S,148V,178T,200S,207T,208G
MN966119pj51China2019genomic DNA12136L,14P,15L,68I,71D,83L,116A,120G,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I
MN966121pj54China2019genomic DNA120814P,68I,71D,83L,91V,110N,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G
MN966122pj55China2019genomic DNA12066A,10P,11I,14P,15V,31G,33N,54M,58I,79D,83T,87Q,92P,96I,110N,116A,128D,148V,178T,200A,203R
MN966124pj58China2019genomic DNA12036A,15V,31G,33N,54M,58I,83T,87Q,92P,96I,110N,116A,128D,148V,178T,200S
MN966125pj59China2019genomic DNA12146A,14P,15V,31G,33N,54M,58I,79D,83T,92P,94N,96I,116T,128D,148V,178T,204S,207T,208G
MN966126pj64China2019genomic DNA12106A,14P,27I,31G,33N,54M,58I,86A,92Q,128D,148V,178T,200S,207T,208G
MN966127pj65China2019genomic DNA12066A,14P,15V,31G,33N,41T,54M,58I,83T,92P,96I,128D,135V,148V,154K,178T,200S
MN966128pj67China2019genomic DNA12066A,14P,15L,31G,33N,54M,58I,83L,92P,115L,120S,128D,148V,178T,200S
MN966129pj69China2019genomic DNA12033I,6L,12Y,14S,68I,71D,83L,111I,116A,120A,124V,128D,154K,169F,171C,178T,180D,187D,191I,203R
MN966130pj70China2019genomic DNA12106M,41T,83L,110N,116A,120S,199R
MN966131pj71China2019genomic DNA12076A,14P,27I,31G,33N,54M,58I,83L,92P,123A,128D,148V,178T,200S,207T
MN966134pj75China2019genomic DNA12066A,14S,15L,31G,33N,54M,58I,92P,120S,123A,128D,148V,149G,200S
MN966135pj80China2019genomic DNA12106A,11T,15V,31G,33N,54M,58I,83L,92P,96L,120G,123V,128D,148V,154K,178T,200S,207T,208G
MN966136pj83China2019genomic DNA12036A,14P,15V,31G,33N,54M,58I,83T,92P,96I,110N,128D,148V,178T,200S
MN966137pj87China2018genomic DNA12166S,14P,41T,71D,83L,87P,91V,110S,154K,169F,178T,180D,187D,203R,204G,207Q,208G,210S
MN966138pj88China2018genomic DNA12066A,14S,15L,31G,33N,41T,54M,58I,59I,83T,87Q,92P,96I,110N,116A,128D,148V,149G,200S
MN966140pj93China2019genomic DNA12046L,14P,41T,71D,83T,116A,120A,124V,154K,169F,178T,180D,187D,203R
MN966141pj94China2019genomic DNA12106A,31G,33N,54M,58I,87Q,92P,116A,120G,123A,128D,178T,200S,207T,208G
MN966143ts005China2018genomic DNA120911I,14P,68I,71D,83L,91A,96L,116A,120A,124V,128D,129M,154K,169F,178T,180D,187D,203R,208G
MN966144ts012China2018genomic DNA12096M,11M,14P,15L,41T,68I,71D,83L,86P,87Q,91H,92P,93A,96I,116T,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G
MN966145ts013China2018genomic DNA12096L,11I,14P,41T,68I,71D,83L,86P,91H,92P,93A,96I,116T,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G
MN966146ts015China2018genomic DNA12016L,14P,68I,71D,83L,116A,120S,124V,128D,154K,169F,178T,180D,187D
MN966147ts016China2018genomic DNA120814P,68I,71D,83L,91V,116A,120S,124V,128D,139D,154K,169F,170N,178T,180D,187D,203R,208G
MN966148ts021China2018genomic DNA12066L,14P,44A,68I,71D,83L,91V,110N,116A,124V,128D,154K,160S,169F,178T,180D,187D,203R
MN966149ts025China2018genomic DNA120914P,68I,71D,83L,91V,116A,120S,124V,128D,154K,169F,178T,183H,187D,203R,208G
MN966151ts031China2018genomic DNA12096V,14P,15L,26A,31G,33N,54M,58I,64G,83L,92P,120G,123A,128D,148V,178T,191I,200S,207T,208G
MN966153TS043China2018genomic DNA12096L,11T,14P,41T,68I,71D,83L,87Q,91H,92P,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G
MN966155TS046China2018genomic DNA12096M,14P,41T,68I,71D,83L,116A,124V,128D,135V,154K,180D,187D,191I,208G
MN966157TS050China2018genomic DNA12096L,11T,14P,41T,68I,71D,110N,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G
MN966158TS051China2018genomic DNA12076M,14P,41T,68I,71D,83L,120S,124V,128D,154K,169F,178T,180D,187D,203R
MN966159TS053China2018genomic DNA12136A,14P,15L,31G,33N,54M,58I,67H,79Q,92P,103E,105T,108S,110Y,118K,120S,121H,123T,124F,128G,129L,138I,139K,148V,178T,200S,207T,208G
MN966161TS057China2018genomic DNA12076M,14P,68I,71D,83L,120S,124V,128D,154K,169F,178T,187D,203R
MN966162TS061China2018genomic DNA12106L,15L,41T,71D,91V,120S,154K,169F,171V,178T,180D,203R
MN966163TS069China2018genomic DNA12056L,15L,41T,71D,83L,91V,120S,123A,154K,169F,178T,180D,203R
MN966164TS072China2018genomic DNA12076A,14P,31G,33N,54M,58I,110N,116A,128D,148V,178T,200S,207S
MN966165TS073China2018genomic DNA12106A,14P,31G,33N,54M,58I,116A,128D,178T,200S,207T,208G
MN966166TS075China2018genomic DNA12086L,15L,41T,71D,91V,107A,120S,154K,169F,178T,180D,203R
MN966167TS077China2018genomic DNA12116L,83L,120H,208G
MN966168TS078China2018genomic DNA12066L,83L,120H
MN966169TS079China2018genomic DNA12072V,6L,14P,41T,68I,71D,83L,91V,116A,120S,121T,124V,128D,154K,169F,171C,178T,180D,187D,203R
MN966170TS080China2018genomic DNA12086L,68I,71D,83L,91V,110N,116A,120S,124V,128D,153T,154K,169F,178T,183H,187D,191I,203R,208G
MN966171TS081China2018genomic DNA12116L,83L,120H,208G
MN966172TS086China2018genomic DNA12076A,14P,15V,31G,33N,54M,58I,71D,83L,92P,110N,128D,148V,149G,154K,178T,204G,207T
MN966173TS087China2018genomic DNA12086L,14P,44A,68I,71D,83L,91A,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G
MN966174TS088China2018genomic DNA120514P,68I,71D,79D,83L,116A,120S,124V,128D,154K,165M,169F,170R,178T,180D,187D,203R
MN966175TS089China2018genomic DNA12056A,14P,15V,31G,33N,54M,58I,87Q,92P,96I,110N,116A,128D,148V,149G,154K,178T,203R,204G
MN966176TS098China2018genomic DNA12166L,14P,44A,68I,71D,83L,94N,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G,210S,211I
MN966177TS099China2018genomic DNA12066L,14P,68I,71D,83L,86I,91V,96V,116A,120S,121T,128D,154K,169F,178T,180D,187D
MN966178TS100China2018genomic DNA12076L,14P,15L,68I,71D,83L,116A,120G,124V,128D,154K,169F,178T,180D,187D,203R
MN966179TS103China2018genomic DNA120814P,68I,71D,83L,110N,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G
MN966181TS107China2018genomic DNA12066L,14P,41T,68I,71D,83T,91V,96V,116A,120G,123A,124V,128D,154K,169F,178T,180D,187D,203R
MN966182TS111China2019genomic DNA12066L,11I,14P,41T,68I,71D,83L,96V,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R
MN966183xh02China2018genomic DNA12106A,14S,15L,31G,33N,54M,58I,83L,86A,87Q,92P,96L,120G,123A,128D,148V,154K,178T,200S,207T,208G
MN966186xh09China2018genomic DNA12106A,14P,15V,31G,33N,54M,58I,87Q,120S,128D,178T,183A,200S,207T,208G
MN966187xh12China2018genomic DNA12066A,14P,15L,31G,33N,54M,58I,92P,128D,178T,200S
MN966188xh16China2018genomic DNA12106A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G
MN966189xh17China2018genomic DNA12096A,14P,15L,31G,33N,54M,58I,86A,92P,120S,123S,128D,148V,178T,200S,207T,208G
MN966190xh18China2018genomic DNA12092V,6L,14P,41T,68I,71D,83L,110N,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G
MN966191xh19China2018genomic DNA12092V,6L,14P,41T,68I,71D,83L,110N,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G
MN966192xh20China2018genomic DNA12056A,15L,31G,33N,54M,58I,92P,120S,148I,178T,200S
MN966193xh22China2018genomic DNA12076A,11T,14S,15L,31G,33N,54M,58I,91A,92P,120G,123A,128D,148I,153V,154K,178T,200S,207T
MN966194xh24China2018genomic DNA12106A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,200S,207T,208G
MN966196xh28China2018genomic DNA12106A,14P,15L,31G,33N,54M,58I,92P,107S,120G,123A,128D,148V,178T,191I,200S,207T,208G
MN966197xh29China2018genomic DNA12066A,14P,15L,31G,33N,54M,58I,92P,120S,128D,148V,178T,200S
MN966199xh31China2018genomic DNA120714P,68I,71D,83L,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R
MN966200xh32China2018genomic DNA12106A,11T,14P,15L,31G,33N,54M,58I,92P,120G,123A,128D,148V,154K,178T,200S,207T,208G
MN966201xh33China2018genomic DNA120914P,68I,71D,83L,91V,116A,120A,124V,128D,154K,169F,171C,178T,180D,187D,203R,208G
MN966202xh35China2018genomic DNA12106L,83L,120H,208G
MN966203xh36China2018genomic DNA12096A,14P,15L,31G,33N,54M,58I,92P,128D,148V,178T,200S,207T,208G
MN966204xh37China2018genomic DNA12106A,14P,15L,31G,33N,54M,58I,79D,83L,87Q,96L,110N,116A,148V,149G,154K,178T,200S,207T,208G
MN966205xh39China2018genomic DNA12086L,68I,71D,83L,95A,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R,208G
MN966206xh40China2018genomic DNA12096L,14P,44A,68I,71D,83L,116A,120H,124V,128D,148S,154K,169F,178T,180D,187D,203R,208G
MN966209xh43China2018genomic DNA12106A,14P,15L,31G,33N,54M,58I,92P,110N,128D,148V,200S,207T,208G
MN966212xh46China2018genomic DNA12076A,14P,15L,31G,33N,54M,58I,92P,110N,120G,123S,128D,148V,178T,198R,200S,207T
MN966214xh51China2019genomic DNA12056A,11T,14S,15L,31G,33N,54M,58I,87Q,92P,107S,120S,128D,148V,149G,154K,178T,200S
MN966216xh55China2019genomic DNA12062V,6L,14P,41T,68I,71D,83L,110N,116A,120S,124V,128D,154K,169F,178T,180D,187D,203R
MN966217xh60China2019genomic DNA12066A,14P,15V,31G,33N,54M,58I,83I,86I,91P,120S,128D,148V,178T,200A
MN966218xh63China2019genomic DNA12106A,14P,15L,31G,33N,54M,58I,71D,83I,92P,120G,123A,128D,148V,149G,154K,178T,200S,202P,207S,208G
MN966219xh66China2019genomic DNA12066L,14P,44A,68I,71D,83L,116A,124V,128D,136M,154K,169F,178T,180D,187D,203R

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