<!--#set var="title" value="Genbank References: capsid (p24)" --> <!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Genbank References: capsid (p24)

AuthorsTitleCitationE-value# in
Gb
#PtsARTSourceCloningStudyType
Cho (2019) Phylogenetic analysis of near full-length sequences from the earliest Korean Subclade B of HIV-1 Unpublished 7.08e-172 93         Unpublished

Download sequences

AccessionIsolateNameCountryColl DateCloneMolTypeSourceNoteFirstAALastAAMutList
MN04359000LJI12South KoreaDec-2000genomic DNAsubtype: Korean subclade B12316L,14P,41T,83L,87Q,91V,107S,120S,124V,146C,154K,184*,216S,225S
MN04360302LGH10-HP-12South KoreaOct-2002genomic DNAsubtype: Korean subclade B12316L,83L,154K
MN04360702LSP11-HP-17South KoreaNov-2002genomic DNAsubtype: Korean subclade B12316L,83L,148S,154K,197N
MN04360202PGU10-HP-11South KoreaOct-2002genomic DNAsubtype: Korean subclade B12316L,83L,86M,91L
MN04360102SHJ8-HP-10South KoreaAug-2002genomic DNAsubtype: Korean subclade B12316L,10I,23*,27I,28K,83L,148V,208G,213D
MN04360003CWS10-HP-8South KoreaOct-2003genomic DNAsubtype: Korean subclade B12316L,14P,27I,83L,86A,87Q,91V,96I,98D,116T,123S,148I,210S
MN04360603JIS10-HP-16South KoreaOct-2003genomic DNAsubtype: Korean subclade B12316L,23*,170R,210S
MN04360507KTG10-HP-14South KoreaOct-2007genomic DNAsubtype: Korean subclade B12316L,27I,36I,83L,86P,87Q,120S,123A,160S,225S
MT22412712Lsw3:HP-15South KoreaMar-2012genomic DNAsubtype: Korean Subclade B12316L,27I,83L,148I,208G,225S
MT87744712MHI6South KoreaJun-201210190; 10192; 10188;genomic DNAsubtype: CRF02_AG12316A,11T,14P,15M,26A,27I,41T,45K,54L,58I,68I,71D,75D,92P,104L,107I,124F,128D,135V,148V,169F,178T,200S,203R,208G
MW52306414KMK2-HP-13-17765South KoreaFeb-2014genomic DNAsubtype: Korean Subclade B12316L,18K,83L,120H,154K,170R,194S
MW52306514KMK2-HP-13-17767South KoreaFeb-2014genomic DNAsubtype: Korean Subclade B12316L,83L,120H,154K,170R,194S
MT87745514KYY6South KoreaJun-201413126; 13950; 13115;genomic DNAsubtype: Korean Subclade B12316L,23*,27I,80*,83L,100K,101R,120H,124V,127K,128K,133*,137R,156R,162K,173K,184*,197E,206R,222R
MW52305516LJW2-HP-3-17069South KoreaFeb-2016genomic DNAsubtype: Korean Subclade B12316L,27I,62L,74H,75D,83L,87Q,90L,91H,116A,171I,208G
MT22412516LJW2:HP-3South KoreaFeb-2016genomic DNAsubtype: Korean Subclade B12316L,27I,32V,75D,83L,87Q,91H,92P,116A,208G
MT87745219KYY9South KoreaOct-201917482; 17483; 17009;genomic DNAsubtype: Korean Subclade B123114P,27I,83L,87Q,91V,96I,116A,120H,124V,148S,154K,225S
MW52306219LGH11-HP-12-17340South KoreaNov-2019genomic DNAsubtype: Korean Subclade B12316L,83L
MW52307419LSP8-HP-17-17278South KoreaAug-2019genomic DNAsubtype: Korean Subclade B12316L,83L,148S,154K,225A
MW52307519LSP8-HP-17-17279South KoreaAug-2019genomic DNAsubtype: Korean Subclade B12316L,83L,148S,154K,225A
MW52307619LSP8-HP-17-17281South KoreaAug-2019genomic DNAsubtype: Korean Subclade B12316L,83L,148S,153L,168V,225A
MT87744819MHI12South KoreaDec-201917422; 17168; 17426;genomic DNAsubtype: CRF02_AG12314P,6A,8R,9P,11I,14P,15M,26A,27I,36L,38L,39L,41T,54M,56V,58I,68I,71D,74S,89V,92P,128D,135V,148V,169F,178T,200S,203R,208G
MN04357791HJY7South KoreaJul-1991genomic DNAhuman serumsubtype: Korean subclade B12316L,15L,75K,83L,87Q,89E,92D,95L,97G,102N,104L,120H,148A,154K,208G
MN04357691KGS7South KoreaJul-1991genomic DNAhuman serumsubtype: Korean subclade B12316L,27I,83L,96I,116L,208G
MT55906691LCS9-Sep-1991South KoreaSep-199116497/17421/6867/168genomic DNAsubtype: Korean Subclade B12316L,83L,108S,200S,213D
MN23764392CIS6South KoreaJun-1992genomic DNAhuman serumsubtype: Korean Subclade B12316L,27I,83L,208G
MZ35915092CIS6-16540South KoreaJun-199216540;7028;6892;1683genomic DNAserumsubtype: Korean subclade B12316L,27I,72P,77V,83L,107I,208G
MN04359992CWS5-HP-8South KoreaMay-1992genomic DNAhuman serumsubtype: Korean subclade B12316L,27I,83L,90L,96I,120H
MN04359892CYK6South KoreaJun-1992genomic DNAhuman serumsubtype: Korean subclade B12316L,83L
MT55904692DGi6-Jun-1992South KoreaJun-199216487/17415/7114/168genomic DNAsubtype: Korean Subclade B12316L,83L
MN04358892HJiH10South KoreaOct-1992genomic DNAhuman serumsubtype: Korean subclade B12316L,27I,73L,83L,86E,87Q,91L,108N,110N,116A,120S,208G,225S
MK57748192HSH1South KoreaJan-1992genomic DNAserumsubtype: Korean subclade B12316L,27I,83L,116A,118I,148V
MT10187192JSH3South KoreaMar-1992genomic DNAhuman serumsubtype: Korean subclade B12316L,27I,83L,87P,120H,124V
MN04358592JWK3South KoreaMar-1992genomic DNAhuman serumsubtype: Korean subclade B12316L,14P,27I,79D,83L,148A,208G
MT55904492KChS3-Mar-1992South KoreaMar-199216477/17395/17412/17genomic DNAsubtype: Korean Subclade B12316L,27I,83L,112A,116A,118T
MN04358492KHB4South KoreaApr-1992genomic DNAhuman serumsubtype: Korean subclade B12316L,83L,112A,116A,124V
MT87745392KJHg11South KoreaNov-199216536; 17401; 15050;genomic DNAsubtype: Korean Subclade B12316L,83L
MN04359692KJS11South KoreaNov-1992genomic DNAhuman serumsubtype: Korean subclade B12316L,14P,15L,83L,208G,225S
MN04358792KSS12South KoreaDec-1992genomic DNAhuman serumsubtype: Korean subclade B12316L,83L,98D,108I
MN04360492KTG3-HP-14South KoreaMar-1992genomic DNAhuman serumsubtype: Korean subclade B12316L,83L,225S
MN04359192KYB10South KoreaOct-1992genomic DNAsubtype: Korean subclade B12316L,14P,27I,44A,83L,91V,110N,116A,120S,148V
MN04359792KYJ5South KoreaMay-1992genomic DNAhuman serumsubtype: Korean subclade B12316L,15L,28K,83M,107S,120S,154K,183T,225S
MN04357992KYY3South KoreaMar-1992genomic DNAhuman serumsubtype: Korean subclade B12316L,27I,83L,120H,124V
MN04358292LSK6South KoreaJun-1992genomic DNAhuman serumsubtype: Korean subclade B12316L,27I,83L,208G
MN04358992LSY12South KoreaDec-1992genomic DNAhuman serumsubtype: Korean subclade B12316L,27I,65G,83L,148I,194S
MN23764492OCH3South KoreaMar-1992genomic DNAhuman serumsubtype: Korean Subclade B12316L,83L
MK57748092YWS6South KoreaJun-1992genomic DNAserumsubtype: Korean subclade B12316L,83L,225S
MT55904593BGO2-Feb-1993South KoreaFeb-199317388/17389/17388/70genomic DNAsubtype: Korean Subclade B12316L,18K,83L,96L,162I,166H,169H,172V,173G
MN04358693BJR3South KoreaMar-1993genomic DNAhuman serumsubtype: Korean subclade B12316L,14P,27I,83L,225S
MT87745493HSW4South KoreaApr-199316480; 7210; 6743; 1genomic DNAsubtype: Korean Subclade B12316L,27I,83L,87Q,136M,208G
MN04359493HYH5South KoreaMay-1993genomic DNAhuman serumsubtype: Korean subclade B12316L,14P,27I,73L,83L,110N,208G,225S
MN23764693JIJ6South KoreaJun-1993genomic DNAhuman serumsubtype: Korean Subclade B12316L,14P,27I,115L,116V,118I,119A,120I,125A,131Q,225S
MK57747993JJS10South KoreaOct-1993genomic DNAserumsubtype: Korean subclade B12316L,67P,83L
MN23764293KDG4South KoreaApr-1993genomic DNAhuman serumsubtype: Korean Subclade B12316L,27I,83L,148A,208G,225S
MN04359393KHS5South KoreaMay-1993genomic DNAhuman serumsubtype: Korean subclade B12316L,81Y,83L,125T
MN04358193KJin2South KoreaFeb-1993genomic DNAhuman serumsubtype: Korean subclade B12316L,15M,41A,83L,87Q,91V,120S,132K,136M,138F,160S,208G
MN23764593KJK4South KoreaApr-1993genomic DNAhuman serumsubtype: Korean Subclade B12316L,14P,27I,83L,110N,116A,128D,208G
MK57747893KPS10South KoreaOct-1993genomic DNAserumsubtype: Korean subclade B12316L,83L
MN04358093KYR2South KoreaFeb-1993genomic DNAhuman serumsubtype: Korean subclade B12316L,83L,98D
MN04358393LSH5South KoreaMay-1993genomic DNAhuman serumsubtype: Korean subclade B12316L,83L,136M,225S
MN04359593PJA9South KoreaSep-1993genomic DNAhuman serumsubtype: Korean subclade B12316L,44A,83L,148I,180D
MN04359293YEH1South KoreaJan-1993genomic DNAhuman serumsubtype: Korean subclade B12316L,27I,62P,65G,72P,73L,78S,83L,108I,148V
MT22412695PJH6:HP-5South KoreaMay-1995genomic DNAsubtype: Korean Subclade B12316L,83L
MT87745096KYY1aSouth KoreaJan-19963321; 17487; 17488; genomic DNAsubtype: Korean Subclade B12316L,27I,83L,101R,116R,120H,124V,127R
MT87745196KYY1bSouth KoreaJan-19963323; 17489; 17479; genomic DNAsubtype: Korean Subclade B12316L,27I,73F,83L,98D,120H,124V,154K,225S
MT87744999KGS8South KoreaAug-19993306; 12052; 2586; 2genomic DNAsubtype: Korean Subclade B12316L,27I,67H,83L,148V,208G
MT559056HP-11:19PGU11-Nov-2019ASouth KoreaNov-201917342/17039/17345/17genomic DNAsubtype: Korean Subclade B12316L,83L,86M,91L
MT559057HP-11:19PGU11-Nov-2019BSouth KoreaNov-201917343/17257/17346/17genomic DNAsubtype: Korean Subclade B12316L,18K,23*,60R,80*,83L,86M,91L,101R,116R,127R,133*,137R,156R,162K,184*
MT559058HP-12:19LGH11-Nov-2019ASouth KoreaNov-201917340/17030/17347/17genomic DNAsubtype: Korean Subclade B12316L,83L
MT559059HP-12:19LGH11-Nov-2019BSouth KoreaNov-201917341/17418/17419/17genomic DNAsubtype: Korean Subclade B12316L,53T,54S,83L,154K
MT582422HP-14:19KTG12-Dec-2019South KoreaDec-201917237/17149/17225/17genomic DNAsubtype: Korean Subclade B12316L,27I,30I,36I,75D,83L,86P,87Q,93A,101R,120S,123A,160S,225S
MT559060HP-15:19Lsw12-Dec-2019South KoreaDec-201917323/17203/17202/17genomic DNAsubtype: Korean Subclade B12316L,27I,83L,148I,208G,225S
MT582423HP-16:12JIS11-Nov-2012South KoreaNov-201217046/10681/10683/13genomic DNAsubtype: Korean Subclade B12316L,62L,170R,210S
MT582424HP-17:18LSP12-Dec-2018South KoreaDec-201817280/16567/16568/16genomic DNAsubtype: Korean Subclade B12316L,83L,124F,148P,154S,225A
MT559061HP-18:09JHS5-May-2009South KoreaMay-200917324/6288/7326/7299genomic DNAsubtype: Korean Subclade B12316L,83L,208G
MT559062HP-19:19LGS8-Aug-2019ASouth KoreaAug-201917274/17277/17031A/1genomic DNAsubtype: Korean Subclade B12316L,27I,83L,148V
MT559063HP-19:19LGS8-Aug-2019BSouth KoreaAug-201917275/17276/17031B/1genomic DNAsubtype: Korean Subclade B12316L,27I,45*,65S,82I,83L,148V
MT679550HP-2:04JJW2aSouth KoreaFeb-200417455/9884/17447/174genomic DNAsubtype: Korean Subclade B12316L,14P,27I,70E,83L,148I
MT679551HP-2:04JJW2bSouth KoreaFeb-200417456/17461/9856/174genomic DNAsubtype: Korean Subclade B12316L,14P,27I,83L,148I
MT559047HP-2:19JJW6-Jun-2019South KoreaJun-201917352s/17355/16902/1genomic DNAsubtype: Korean Subclade B12316L,14P,27I,81V,83L,85A,86A,89A,148I
MT559064HP-20:19KJO12-Dec-2019ASouth KoreaDec-201917248/17034/17251/17genomic DNAsubtype: Korean Subclade B12316L,83L,136M
MT559065HP-20:19KJO12-Dec-2019BSouth KoreaDec-201917249/17035/17252/17genomic DNAsubtype: Korean Subclade B12316L,83L,136M
MT582420HP-3:02LJW8-Aug-2002South KoreaAug-20024505/4542/662/7412/7genomic DNAsubtype: Korean Subclade B12316L,27I,75D,83L,87Q,91H,92P,116A,208G
MT559048HP-3:20LJW2-Feb-2020ASouth KoreaFeb-202017379/17120/17382/17genomic DNAsubtype: Korean Subclade B12316L,27I,75D,83L,87Q,91H,92P,116A,208G
MT559049HP-3:20LJW2-Feb-2020BSouth KoreaFeb-202017381/17121/17383/17genomic DNAsubtype: Korean Subclade B12316L,27I,75D,83L,87Q,91H,92P,116A,208G
MT559050HP-4:19KGJ7-Jul-2019South KoreaJul-201917315/17146/16924/17genomic DNAsubtype: Korean Subclade B12316L,27I,83L,154K,170R,194S,208G
MT679552HP-6:03JHJ2South KoreaFeb-200317462/241/17450/735/genomic DNAsubtype: Korean Subclade B12316L,27I,74T,83L,120H,128D,136M,208G,225S
MT559051HP-6:19JHJ7-Jul-2019South KoreaJul-201917250/17145/16920/17genomic DNAsubtype: Korean Subclade B12316L,27I,41T,83L,128D,136M,194S,208G,225S
MT559052HP-7:19LSM8-Aug-2019ASouth KoreaAug-201917331/17032/16900/17genomic DNAsubtype: Korean Subclade B12316M,56V,58A,67H,83L,93S,131N,170T,225S
MT559053HP-7:19LSM8-Aug-2019BSouth KoreaAug-201917332/17416/16901/17genomic DNAsubtype: Korean Subclade B12316M,67H,83L,225S
MT679553HP-7:96LSM10South KoreaOct-19963474/4580/7030/7053/genomic DNAsubtype: Korean Subclade B12316L,83L,225S
MT582421HP-8:11CWS1-Jan-2011South KoreaJan-201112198/9866/11499/171genomic DNAsubtype: Korean Subclade B12316L,14P,27I,83L,86A,87Q,91V,96I,98D,116T,123S,148I,210S
MT559054HP-9:18KDE11-Nov-2018ASouth KoreaNov-201817328/16913/17026/17genomic DNAsubtype: Korean Subclade B12316L,74I,80C,83L,85A,89V,93S,96P,125A,131N,136M,154K,170T
MT559055HP-9:18KDE11-Nov-2018BSouth KoreaNov-201817329/16912/17026/17genomic DNAsubtype: Korean Subclade B12316L,23*,80*,82K,83L,116R,117*,127R,133*,136I,137R,154K,184*