Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

Clinical Trial Datasets

ACTG 5241 clinical trial
    Gandhi RT, Tashima KT, Smeaton LM, Vu V, Ritz J,Andrade A, Eron JJ, Hogg E, Fichtenbaum CJ.
Long-term Outcomes in a Large Randomized Trial of HIV-1 Salvage Therapy: 96-Week Results of AIDS Clinical Trials Group A5241 (OPTIONS). J Infect Dis. 2020 Apr 7;221(9):1407-1415
PR Data in HIVDB
RT Data in HIVDB
Nucleotide sequences in fasta format
ACTG5241_PR_fasta.txt,   ACTG5241_RT_fasta.txt,   Composite alignment (of sequences at baseline)
ACTG5241_PR_composite.html,   ACTG5241_RT_composite.html,   List of sequences with stop codon, ambiguity codon and unusual residues
ACTG5241_PR_QA.txt,   ACTG5241_RT_QA.txt,   Method: Direct PCR, Dideoxy terminator sequencing
Sample: Plasma
Timing: Multiple timepoints
Integrated view of ARV, genotypes, RNA and CD4 on 412 patients
Downloadable data files