Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Gordon (2003)
Title Molecular characteristics of human immunodeficiency virus type 1 subtype C viruses from KwaZulu-Natal, South Africa: implications for vaccine and antiretroviral control strategies.
Citation J Virol
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 72
NumPts 72
Subtype C, D

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
ZA004p01 ZA004p01 None    T12S, K14R, I15V, L19I, M36L, R41K, L63P, H69K, L89M, I93L  
ZA005p01 ZA005p01 None    T12S, I15V, G16E, L19I, K20R, M36I, N37A, P39S, R41K, H69K, L89M, I93L  
ZA006p01 ZA006p01 None    T12S, I15V, L19I, M36I, N37S, R41K, H69K, V77I, L89M, I93L  
ZA007p01 ZA007p01 None    T12S, I15V, L19I, M36I, R41K, H69K, L89M, I93L  
ZA008p01 ZA008p01 None    I15V, G16E, L19I, E35D, M36I, H69K, L89M, I93L  
ZA009p01 ZA009p01 None    T12S, I15V, L19T, K20R, E35D, M36I, R41K, H69K, L89M, I93L  
ZA010p01 ZA010p01 None    T12S, I15V, L19V, M36I, H69K, L89M, I93L  
ZA011p01 ZA011p01 None    T12S, I15V, L19I, E35D, M36I, R41K, H69K, T74S, L89M, I93L  
ZA012p01 ZA012p01 None    T12S, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
ZA013p01 ZA013p01 None    T12S, I15V, L19I, E35D, M36I, R41K, H69K, L89M, I93L  
ZA014p01 ZA014p01 None    T12S, I15V, L19I, M36I, N37S, R41K, H69K, L89M, I93L  
ZA015p01 ZA015p01 None    I15V, L19I, M36I, R41K, H69K, L89M, I93L  
ZA016p01 ZA016p01 None    T12S, K14T, I15V, L19V, E35D, M36I, Q61H, H69K, L89M, I93L  
ZA017p01 ZA017p01 None    T12S, I15V, L19I, M36I, R41K, D60E, I62V, L63P, C67H, H69K, L89M, I93L  
ZA018p01 ZA018p01 None    T12P, I15V, L19I, M36I, R41K, D60E, I62V, L63P, C67H, H69K, L89M, I93L  
ZA019p01 ZA019p01 None    T12S, I15V, L19I, M36I, N37A, R41K, H69K, L89M, I93L  
ZA020p01 ZA020p01 None    T12S, I15V, L19I, E35D, N37S, R41K, H69K, V77I, L89M, I93L  
ZA021p01 ZA021p01 None    I13V, M36L, R41K, I62V, H69Y  
ZA022p01 ZA022p01 None    T12S, I15V, L19T, K20R, M36I, R41K, H69K, L89M, I93L  
ZA023p01 ZA023p01 None    I15V, G16E, L19I, R41K, L63T, H69K, V77I, I93L  
ZA024p01 ZA024p01 None    I15V, L19I, N37S, R41K, L63I, H69K, V77I, I93L  
ZA025p01 ZA025p01 None    T12A, I15V, L19E, M36I, R41K, L63P, H69K, L89I, I93L  
ZA026p01 ZA026p01 None    T12S, I15V, L19I, M36I, N37D, R41K, Y59F, L63T, I66L, H69K, L89M, I93L  
ZA027p01 ZA027p01 None    T12S, I15V, L19V, E35D, M36I, R41K, L63V, H69Q, L89M  
ZA028p01 ZA028p01 None    T12P, I15V, L19T, M36I, R41K, L63P, H69K, I93L  
ZA029p01 ZA029p01 None    T12S, K14R, I15V, L19I, M36L, R41K, H69K, L89M, I93L  
ZA030p01 ZA030p01 None    I15V, L19I, E35D, M36I, R41K, H69K, L89M, I93L  
ZA031p01 ZA031p01 None    T12S, I15V, L19I, E35D, M36I, R41K, H69K, T74S, L89M, I93L  
ZA032p01 ZA032p01 None    T12S, L19V, E35D, M36I, R41K, K45R, H69K, L89M, I93L  
ZA033p01 ZA033p01 None    T12S, I15V, L19I, M36I, R41K, H69K, L89M, I93L  
ZA034p01 ZA034p01 None    T12S, I15V, L19I, M36I, R41K, D60E, H69K, L89M, I93L  
ZA035p01 ZA035p01 None    T12S, I15V, L19V, E35D, M36I, R41K, R57K, L63V, H69K, V82I, L89M, I93L  
ZA036p01 ZA036p01 None    T12S, L19I, N37T, H69K, L89M, I93L  
ZA037p01 ZA037p01 None    T12S, K14R, I15V, L19T, M36I, R41K, L63H, H69K, I93L  
ZA038p01 ZA038p01 None    T12S, I15V, L19V, K20R, E35D, M36I, R41K, H69K, L89M, I93L  
ZA039p01 ZA039p01 None    T12S, K14R, I15V, L19I, E35D, M36I, R41K, H69K, L89M, I93L  
ZA040p01 ZA040p01 None    T12S, L19I, E35D, M36I, R41K, H69K, L89M, I93L  
ZA041p01 ZA041p01 None    T12S, I15V, L19V, M36I, R41K, D60E, H69K, I72M, L89M, I93L  
ZA042p01 ZA042p01 None    T12S, I15V, L19I, M36I, R41K, D60E, Q61E, H69K, L89M, I93L  
ZA043p01 ZA043p01 None    T12S, I15V, L19V, K20R, E35D, M36I, R41K, L63V, H69K, T74S, L89M, I93L  
ZA044p01 ZA044p01 None    L10I, L19V, M36I, P39S, R41K, L63P, H69K, L89M, I93L  
ZA045p01 ZA045p01 None    T12S, K14R, I15V, L19V, M36I, R41K, L63S, H69K, P79PS, L89M, I93L  
ZA046p01 ZA046p01 None    T12S, I15V, L19I, M36I, R41K, K45R, R57K, D60E, L63P, H69K, K70R, L89M, I93L  
ZA047p01 ZA047p01 None    T12S, I15V, L19I, E35D, M36I, N37E, R41K, H69K, L89M, I93L  
ZA048p01 ZA048p01 None    I15V, L19V, E35D, M36I, R41K, L63V, H69K, L89M, I93L  
ZA049p01 ZA049p01 None    T12S, I15V, L19I, K20R, N37S, R41K, H69K, V77I, L89M, I93L  
ZA050p01 ZA050p01 None    T12S, I15V, L19I, M36I, N37S, R41K, L63P, H69K, L89M, I93L  
ZA051p01 ZA051p01 None    T12A, I15V, L19T, M36I, R41K, H69K, I93L  
ZA052p01 ZA052p01 None    T12S, K14R, I15V, L19I, M36I, R41K, L63P, H69K, L89M, I93L  
ZA053p01 ZA053p01 None    T12S, K14R, I15V, L19I, M36I, R41K, H69K, L89M, I93L  
ZA054p01 ZA054p01 None    V11I, I15V, L19V, M36I, R41K, H69K, L89M, I93L  
ZA055p01 ZA055p01 None    T12S, K14R, I15V, L19T, M36I, R41K, K45R, H69K, L89M, I93L  
ZA057p01 ZA057p01 None    I15V, L19I, E35D, M36I, R41K, H69K, L89M, I93L  
ZA058p01 ZA058p01 None   Q58E T12S, I15V, L19T, K20R, E35D, M36I, R41K, H69K, T74S, L89M, I93L  
ZA059p01 ZA059p01 None    T12S, K14R, I15V, L19I, M36I, R41K, H69K, L89M, I93L  
ZA060p01 ZA060p01 None    T12S, I15V, G16E, L19I, M36I, R41K, D60E, L63Q, H69K, V77I, L89M, I93L  
ZA061p01 ZA061p01 None    T12S, I15V, L19I, M36I, R41K, H69K, I72M, L89M, I93L  
ZA062p01 ZA062p01 None    T12P, I15V, L19T, R41K, D60E, H69K, L89M, I93L  
ZA063p01 ZA063p01 None    T12S, I15V, G16E, L19I, E35D, M36I, L63P, H69K, L89M, I93L  
ZA064p01 ZA064p01 None    T12S, I15V, E35D, M36I, N37D, R41K, L63P, H69K, L89M, I93L L19A 
ZA065p01 ZA065p01 None    I15V, L19V, E35D, M36I, N37D, R41K, K45R, L63P, H69K, L89M, I93L  
ZA066p01 ZA066p01 None    T12S, I15V, G16E, L19I, M36T, N37S, R41K, L63T, H69K, L89M, I93L  
ZA068p01 ZA068p01 None    K14T, I15V, L19T, K20R, E35D, M36I, H69K, L89M, I93L  
ZA069p01 ZA069p01 None    T12S, I15V, L19I, K20R, E35D, M36I, R41K, H69K, T74S, L89M, I93L  
ZA071p02 ZA071p02 None    K14S, I15V, L19I, M36I, N37A, L63V, H69K, L89M, I93L  
ZA073p01 ZA073p01 None    T12S, I15V, L19V, M36I, R41K, H69K, L89M, I93L  
ZA074p01 ZA074p01 None    T12S, I15V, L19I, N37S, P39S, R41K, L63P, H69K, L89M, I93L  
ZA075p01 ZA075p01 None    T12A, K14R, I15V, L19I, M36I, R41K, L63D, H69K, I93L  
ZA077p02 ZA077p02 None    T12S, I15V, M36I, R41K, L63P, H69K, L89M, I93L  
ZA078p02 ZA078p02 None    I15V, L19V, E35D, M36I, R41K, H69K, L89M, I93L  
ZA079p02 ZA079p02 None    T12S, I15V, L19I, E35D, M36I, R41K, D60E, I62V, H69K, K70R, L89M, I93L  
ZA080p01 ZA080p01 None    T12S, I15V, L19V, E35D, M36V, N37D, R41K, H69K, L89M, I93L