Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Papathanasopoulos (2002)
Title Full-length genome analysis of HIV-1 subtype C utilizing CXCR4 and intersubtype recombinants isolated in South Africa.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 4
NumPts 4
Subtype C

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
98ZADu178 98ZADu178 None None   V35T, E36A, T39E, S48T, V60I, K122E, D123G, K173I, Q174K, D177E, T200A, Q207G, R211K, F214L, V245Q, A272P, K277T, E291D, V292I, I293V, I329L, Q334N, G335D, R356K, M357R, G359T, T377L, K390R, T397A, A400V, E404D, V435A, L452M, V466I, S468T, T470N, D471E, H483Q, L491S, S519N, K530R, A534S, A554K  
99ZACM4 99ZACM4 None None   V35T, E36A, T39E, S48T, V90I, K173A, Q174K, D177E, T200A, Q207A, R211K, V245Q, A272P, K275R, Q278G, T286A, E291D, V292I, I293V, P294L, A327V, Q334H, G335D, R356K, M357R, G359T, T377M, K390R, A400T, E404D, V435A, R461K, S468N, D471E, H483Q, L491P, K512R, S519N, A534S, A554S  
99ZACM9 99ZACM9 None None   V35T, E36A, T39E, S48T, K122E, D123N, K173T, G196K, T200A, Q207E, R211K, V245Q, A272H, K277R, T286V, E291D, V292I, I293V, Q334N, G335D, R356K, G359T, T377M, K390R, A400T, E404D, E432D, V435A, A437V, L452K, R461K, V466I, D471E, T477A, H483Q, L491P, S519N, K527N, K530R, V531I, A534S, A554S  
99ZASW7 99ZASW7 None None   V35I, E36A, T39E, S48T, K122E, D123S, K173A, Q174K, D177E, T200A, Q207K, R211K, V245Q, A272P, E291D, V292I, I293V, Q334D, G335D, R356K, G359T, T377L, K390R, A400T, E404D, V435A, L452K, V466I, T470D, D471E, H483Q, L491P, S519N, K530R, A534S, A554S  

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