Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Cuevas (2002)
Title High HIV-1 genetic diversity in Cuba.
Citation AIDS
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 107
NumPts 107
Subtype B, D, CRF18_cpx, G, C, CRF02_AG, F, J, CRF45_cpx, H

 
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Page 1   listing Isolate 1 to Isolate 100 from Total 107 Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
CU10 CU10 SQV    T12S, I15V, L19I, M36I, N37S, R41K, H69K, L89M, I93L  
CU100 CU100 None    I13V, K14R, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
CU101 CU101 None    T12S, L19I, N37S, L63A  
CU102 CU102 None    L19I, M36I, I64V, I93L  
CU103 CU103 None    I13V, K14R, K20I, E35N, M36I, R41K, H69K, V82I, L89M  
CU104 CU104 IDV    E35D, M36I, R41K, K43R, D60E, L63P, H69Q  
CU105 CU105 IDV    G16D, M36I, R41K, K43R, Q61E, L63P, H69K, I93L  
CU11 CU11 None    L10I, I62V, L63P, I93L  
CU12 CU12 None    T12A, I13V, N37S, I62V, L63P, V77I  
CU13 CU13 None    L19I, E35D, N37T, I62V, L63P, I72V, I93L  
CU14 CU14 None    I13V, K14R, K20I, E35D, M36I, R41K, K45R, H69K, L89M  
CU15 CU15 None    I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M, T91A, F99L  
CU16 CU16 None    I13V, G16E, K20V, E35D, M36I, R41K, H69K, K70R, L89M  
CU17 CU17 None    T12K, L19I, E35D, M36I, R41K, L63P  
CU18 CU18 None    I13V, G16E, N37S, P39S, L63H, H69R  
CU19 CU19 None    T12K, I15V, L19I, E35D, N37C, R41K, L63P  
CU20 CU20 None    I15V, R41K, C67D, V77I  
CU21 CU21 RTV    T12K, I13V, I15V, L19I  
CU22 CU22 None    I13V, L63P  
CU23 CU23 None    I15V, E35D, M36I, N37D, R41K, K43R, D60E, L63P, H69Q L5Q 
CU24 CU24 None    I13V, N37S, P39S, I62V, L63P  
CU25 CU25 None    I13V, G16A, Q61E, L63P  
CU26 CU26 None    I13V, I62V, L63P  
CU27 CU27 None    L33I, N37S, R41K, A71V, I93L  
CU28 CU28 None    I13V, N37S, I62V, L63P, H69Q, K70T, Q92QK  
CU29 CU29 None    E35D, M36I, R41K, K43R, D60E, L63P, H69Q  
CU30 CU30 None    R41K, K43R, R57K, I62V, L63P, H69Q, A71T, V77I, I93L  
CU31 CU31 None    E35D, M36I, R41K, K43R, L63P, H69Q  
CU32 CU32 None    L10I, I64V, I93L  
CU33 CU33 IDV    I13V, K14R, K20I, E35D, M36I, R41K, L63A, I64M, H69K, L89M  
CU34 CU34 SQV    L10I, I13V, K14R, I15V, G16E, E35D, M36I, R41K, L63T, H69K, T74A, L89M  
CU35 CU35 SQV    L10V, R41K, L63P, V77I, I93L  
CU36 CU36 None    T12A, N37S, I62V, L63P, V77I, I93L  
CU37 CU37 None    N37S, I62V, L63P, V77I, I93L  
CU38 CU38 None    I13V, R41K, L63P, H69Q, V77I  
CU39 CU39 None    I15V, L19Q, E35D, M36I, R41K, H69K, L89M  
CU40 CU40 None    I13V, K20R, M36I, R41K, K43R, Q61E, L63P, H69Q  
CU41 CU41 None    N37S  
CU42 CU42 None   F53L I13V, E35D, I62V, L63P, I64L  
CU43 CU43 None    I13V, E35D, L63P, I64L  
CU44 CU44 None    I13V, I15V, L19Q, N37H, R41K, R57K, I62V, L63P, T74S, V77I  
CU45 CU45 None    L10I, I13V, K20I, E35D, M36I, R41K, K45R, L63P, H69Q, L89M  
CU46 CU46 None    I13V, K14R, K20I, E35D, M36I, R41K, I64M, H69K, L89M  
CU47 CU47 None    R41K, I62V, L63P, I64L, V77I, I93L  
CU48 CU48 None    N37S, L63P, I64V  
CU49 CU49 NFV    N37S, R41K, L63S, I64L  
CU50 CU50 None    M36I, L63P, I93L  
CU51 CU51 IDV    I15V, M36I, N37D, R41K, K43R, L63P, H69Q  
CU52 CU52 IDV    I13V, I15V, L63A, V77I  
CU53 CU53 None   L10LF M36L, N37S, I64V  
CU54 CU54 SQV, IDV    I13V, E35D, M36I, N37D, R41K, K43R, L63P  
CU55 CU55 None    T12A, I13V, K14R, I15V, G16E, K20I, M36I, P39S, R41K, I64M, H69K, L89M  
CU56 CU56 None    I13V, K14R, K20I, E35D, M36I, R41K, I64L, C67E, H69K, K70N, V77I, V82I, L89M  
CU57 CU57 None    I13V, L19I, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
CU58 CU58 None    E35D, N37D, L63P  
CU59 CU59 None    K14R, I15V, Q18E, E35D, M36I, R41K, R57K, L63P, I72V  
CU6 CU6 SQV    E35D, L63P, H69Y, V77I  
CU60 CU60 None    I13V, K14R, G16E, K20M, E35D, M36I, R41K, K43R, L63P, H69Q, L89M  
CU61 CU61 None   T74P K20R, E35D, M36I, N37D, R41K, K43R, D60E, Q61E, L63P, H69Q  
CU62 CU62 None    Q18L, R41K, K43R, L63P, H69Q  
CU63 CU63 SQV    I13V, L63P  
CU64 CU64 None    E35D, M36I, N37D, R41K, K43R, D60E, Q61E, L63P, H69Q  
CU65 CU65 None    E35D, M36I, N37D, R41K, K43R, L63P, I64L, H69Q, K70R, A71T, I72V  
CU66 CU66 None    I13V, K14R, K20I, E35D, M36I, R41K, H69K, L89M  
CU67 CU67 None    I13V, K20R, M36I, N37D, R41K, K43R, L63P, H69Q  
CU68 CU68 None    I13V, K14R, G16E, K20I, E35D, M36I, N37R, L38F, P39T, R41K, I64M, H69K, K70R, L89M, T91A, F99L  
CU69 CU69 None    I13V, K20I, E35D, M36I, R41K, H69K, K70R, L89M  
CU7 CU7 None    E35D, M36I, R41K, K43R, L63P, H69Q  
CU70 CU70 None    L10V, T12P, E35D, M36I, R41K, Q61E, L63P, C67Y, H69Q, L89M  
CU71 CU71 None    L10I, K14R, R41K, K43R, L63P, I64L, H69Q  
CU72 CU72 IDV    I13V, K20I, E35D, M36I, R41K, L63Q, I64L, H69K, V82I, L89M  
CU73 CU73 None    K14R, L19I, E35D, M36I, N37D, R41K, K43R, Q61D, L63P, H69Q, I93L  
CU74 CU74 None    I13V, K14R, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
CU75 CU75 SQV  L90M F53L, L89V L10V, I13V, K20I, M36I, R41K, Q61E, H69K, K70R, A71V, T74S  
CU76 CU76 IDV    I13V, I15M, K20I, E35D, M36I, R41K, H69K, K70R, L89M  
CU77 CU77 None    I15V, I62V, L63P, H69N, V77I R8R*L 
CU78 CU78 None    I13V, G16E, E35D, M36I, R41K, R57K, L63T, E65D, L89M  
CU79 CU79 NFV    T12P, K14R, E35D, L63P, I64L, H69Q  
CU8 CU8 None    K20R, E35D, M36I, N37D, R41K, K43R, L63P, H69Q, V77I  
CU80 CU80 IDV    L10V, E35D, M36I, R41K, K43R, L63P, H69Q, V82I  
CU81 CU81 None    T12S, I15V, L19I, M36I, R41K, H69K, T74S, L89M, I93L  
CU82 CU82 None    L10I, I64V, T74A, I93L  
CU83 CU83 None    I64V  
CU84 CU84 SQV    K14R, I15V, N37S  
CU85 CU85 None    I13V, K20I, E35D, M36I, R41K, R57K, I64M, H69K, K70R, V82I, L89M  
CU86 CU86 None    I13V, N37S, L63S, V77I  
CU87 CU87 IDV    I13V, K20I, E35D, M36I, R41K, H69K, V82I, L89M  
CU88 CU88 None    I13V, K14R, G16E, K20I, E35D, M36I, R41K, H69K, L89M, F99L  
CU89 CU89 None    L10T, T12A, I62V, L63P, V77I, I93L  
CU9 CU9 None    L10I, T12A, I13V, K14E, M36I, N37D, R41K, D60N, Q61E, L63P, C67E, H69K, L89M, I93L  
CU90 CU90 None    I13V, N37S, R41K, L63H  
CU91 CU91 None    T12P, K14R, N37S, R41K, L63P, H69Q, V77I, I93L  
CU92 CU92 None    I15V, M36I, R41K, I93L  
CU93 CU93 None    E35D, N37S, R41K, L63P  
CU94 CU94 None    K20R, E35D, M36I, R41K, K43R, L63P, H69Q  
CU95 CU95 IDV    I13V, I15V, K20M, M36I, R41K, L63P, I64L, H69Q  
CU96 CU96 SQV    I13V, N37S, P39Q, I62V, L63P, I64V  
CU97 CU97 SQV    G16E, E35D, N37S, I62V, L63A, V77I  
CU98 CU98 None    I13V, I62V, L63H  
CU99 CU99 None   Q58E T12P, E35D, L63P, C67D  

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