Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Piyasirisilp (2000)
Title A recent outbreak of human immunodeficiency virus type 1 infection in southern China was initiated by two highly homogeneous, geographically separated strains, circulating recombinant form AE and a novel BC recombinant.
Citation J Virol
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 5
NumPts 5
Subtype CRF08_BC, CRF01_AE

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
SP_11F SP_11F None None   E6D, K11T, V35T, T39K, K122E, D123K, S162C, K173I, Q174K, D177E, I178M, Q207S, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
SP_2F SP_2F None None   E6D, K11T, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, Q207S, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
SP_6F SP_6F None None   V35T, E36A, T39D, S48T, E53D, V60I, K64R, T69S, I135V, S162C, Q197K, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, V317A, D324E, G335D, R356K, G359T, T377M, T386I, K390R, A400T, E404D, E432D, V435A, A437V, L452I, Q464K, V466I, H483Y, L484I, L491S, S519N, K530R, A534S, A554N  
SP_7F SP_7F None None   V35T, E36A, T39D, S48T, E53D, V60I, K64R, T69S, I135V, S162C, T165I, Q207E, R211K, V245Q, A272P, T286A, E291D, V292I, I293V, V317A, D324E, G335D, R356K, G359T, T377M, T386I, K390R, A400T, E404D, E432D, V435A, A437V, L452I, Q464K, V466I, H483Y, L484I, L491S, S519N, K530R, A534S, A554N  
SP_9F SP_9F None None   V35T, E36A, T39D, S48T, E53D, V60I, K64R, T69S, I135V, S162C, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, V317A, D324E, G335D, R356K, G359T, T377M, T386I, K390R, A400T, E404D, E432D, V435A, A437V, L452I, Q464K, V466I, H483Y, L484I, L491S, S519N, K530R, A534S, A554N