Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Si-Mohamed (2000)
Title Selection of drug-resistant variants in the female genital tract of human immunodeficiency virus type 1-infected women receiving antiretroviral therapy.
Citation J Infect Dis
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 42
NumPts 24
Subtype B, J, CRF02_AG, CRF45_cpx, C, CRF01_AE, G, D

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
AS_ABI AS_ABI None    T12A, I15V, G16A, M36I, N37D, R57K, D60E, Q61E, L63T, C67E, H69R, V77I, L89M  
  AS_ABI1 None    T12A, I15V, G16A, M36I, N37D, R57K, D60E, Q61E, L63T, C67E, H69R, V77I, L89M  
AS_BER AS_BER None    R41K, I62V, L63P, I93L  
  AS_BER1 None    R41K, I62V, L63P, I93L  
AS_BIA AS_BIA None    I13V, R41K, I64V  
  AS_BIA1 None    I13V, M36I, R41K, I64V  
AS_BOC AS_BOC None    E35D, M36I, N37S, R41K, L63P  
  AS_BOC1 None    E35D, M36I, N37S, R41K, L63P  
AS_BON AS_BON None    I13V, L63P  
  AS_BON1 None   M46V K14R, G16A, N37D, D60E, Q61G, L63I, C67E, H69K, I72T, V77I, L89M  
AS_BOR AS_BOR None    G16A, R41K, H69Y, I72T  
  AS_BOR1 None    G16A, R41K, H69Y, I72T, V77I  
AS_CHA AS_CHA None    L63P, H69N, V77I  
  AS_CHA1 None    K14R, L63P  
AS_CHO AS_CHO SQV    T12I, E35D, N37E, R57K, I62V, L63A  
  AS_CHO1 SQV    T12I, E35D, N37E, R57K, I62V, L63A  
AS_CRA AS_CRA None    R57K, L63P  
  AS_CRA1 None    R57K, L63P  
AS_DIA AS_DIA None    L10I, G16A, K20R, M36I, N37D, D60E, Q61E, L63T, C67E, H69K, K70R, V77I, L89M  
  AS_DIA1 None    L10I, G16A, K20R, M36I, N37D, K43R, D60E, Q61E, L63T, C67E, H69K, K70R, V77I, L89M  
AS_FAN AS_FAN IDV  I84V, L90M L89V L10I, I13V, L19P, K20I, M36I, N37S, R41K, L63P, H69K, K70R, A71V, I72M  
AS_FIA AS_FIA None    L10I, I13V, N37S, K43R, L63P, H69Q, V77I  
AS_FOG AS_FOG None    I13V, G16E, E35D, M36I, R41K, L63A, H69K, V77I, L89M  
  AS_FOG1 None    I13V, G16E, E35D, M36I, R41K, L63A, H69K, V77I, L89M  
AS_GBA AS_GBA None    I13A, K14R, G16E, K20I, A22V, M36I, R41K, H69K, L89M  
AS_HER AS_HER None    I15V, E35D, N37S, R57K G52V 
AS_KNA AS_KNA None    L10I, G16A, M36I, N37D, D60E, Q61E, I62V, L63I, C67E, H69K, L89M  
  AS_KNA1 None    L10I, G16A, M36I, N37D, D60E, Q61E, I62V, L63I, C67E, H69K, L89M  
AS_LHE AS_LHE None    I13V, K14R, G16E, K20I, M36I, R41K, H69K, K70R, L89M  
  AS_LHE1 None    T12K, I13A, K20I, M36I, R41K, K43R, H69K, L89M R87Q 
AS_MEL AS_MEL None    L10I, I13V, M36I, L63S, H69K  
AS_MWA AS_MWA None    L10I, I13V, M36I, R41K, L63P, H69Q  
  AS_MWA1 None    L63P, H69N, V77I  
AS_NZI AS_NZI None    I13V, L19F, E35D, M36I, R41K, L63P, H69K, K70R, V77I, L89M  
  AS_NZI1 None    I13V, E35D, M36I, R41K, L63P, H69K, K70R, L89M L19C 
AS_PET AS_PET SQV, RTV, IDV, Unknown  I54V, V82A, L90M  L19V, R57K, L63P  
AS_PIN AS_PIN None    L10I, I13V, K14R, K20I, E35D, M36I, R41K, C67N, H69K, V82I, L89M  
  AS_PIN1 None    I13V, K14R, K20I, E35D, M36I, R41K, R57K, L63P, C67S, H69K, V82I, L89M  
AS_SOU AS_SOU None    T12K, I13A, K20I, M36I, R41K, K43R, H69K, L89M  
  AS_SOU1 None    I13V, K14R, G16E, K20I, M36I, R41K, H69K, K70R, L89M  
AS_VIR AS_VIR None    I15V, L19T, K20R, M36I, R41K, I62V, L63P, H69K, I72V, V75I, L89M, I93L, L97I  
  AS_VIR1 None    I15V, L19T, K20R, M36I, R41K, I62V, L63P, H69K, I72V, L89I, I93L, L97I  

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