Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Balotta (2001)
Title Increasing prevalence of non-clade B HIV-1 strains heterosexuals, as monitored by the analysis of the RT and protease sequences.
Citation JAIDS
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 19
NumPts 19
Subtype CRF02_AG, F, CRF12_BF, A, C, CRF06_cpx

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
CB-1082 CB-1082 None None   V21I, V35T, T39A, V60I, Y127F, I135T, S162A, K173T, Q174K, D177E, I178L, T200A, Q207E, V245E, L260LI, T286A, E291D, V292I, I293V  
CB-1092 CB-1092 None None   V60I, K104KN, I135L, S162A, K173T, Q174K, T200A, Q207E, R211RK, V245Q, T286A, E291D, V292I, I293V, P294T  
CB-1142 CB-1142 None None   V35T, I135V, I142T, S162C, E169D, K173A, Q174R, Q207D, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, E297A  
CB-1292 CB-1292 None None   V35T, K122E, D123N, I135V, S162C, K173I, Q174K, Q207EK, R211AT, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, E297A  
CB-1449 CB-1449 None None   V35T, Y56F, I135IV, S162C, E169D, K173T, Q174K, I178L, Q207K, R211A, V245Q, E248D, D250E, A272P, K277R, T286A, E291D, V292I, I293V, E297A  
CB-1614 CB-1614 None None  E138G V35T, T39L, I135L, S162CY, E169D, K173T, Q174K, D177N, Q207D, R211K, V245Q, E248D, A272P, T286A, E291D, V292I, I293V, E297A  
CB-1697 CB-1697 None None   T27P, V35T, E36D, E40ED, K43E, K49KR, V60I, K122E, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, R211K, V245Q, T286A, E291D, V292I, I293V, P294T P150H 
CB-2009 CB-2009 None None   V35T, E36D, K122E, D123DEG, I135V, S162A, Q174QE, D177E, I178M, T200A, Q207E, V245Q, L246M, T286A, E291D, V292I, I293V, P294T  
CB-2045 CB-2045 None None   V21I, V35T, T39A, E40D, V60I, K122E, D123S, I135T, K173L, Q174K, D177G, V179I, T200I, Q207A, R211S, V245Q, E248D, D250E, K281R, T286A, E291D, V292I, I293V, P294T, E297K  
CB-2122 CB-2122 None None   T27P, V35T, E36D, E40ED, K43E, K49KR, V60I, K122E, I135V, S162A, K173T, Q174K, D177E, I178M, T200A, Q207E, R211K, V245Q, T286A, E291D, V292I, I293V, P294T P150H 
CB-2211 CB-2211 None None   V8VI, V35T, T39E, E40ED, S48ST, K122E, D123NS, K173T, T200A, Q207E, R211K, V245Q, A272P, E291D, V292I, I293V  
CB-2356 CB-2356 None None   V35T, E36D, T39L, S162A, K173T, Q174K, T200A, Q207E, R211K, V245Q, T286A, E291D, V292I, I293V, P294T, L310I  
CB-2410 CB-2410 None None   V35T, T39L, K64KR, S162A, R211RK  
CB-2673 CB-2673 None None   V21I, V35T, T39A, E40D, V60I, K122E, D123S, I135T, K173L, Q174K, D177E, V179I, T200I, Q207A, R211S, V245Q, E248D, D250E, K281R, T286A, E291D, V292I, I293V, P294T, E297K  
CB-3280 CB-3280 None None  V106I V35I, D121H, K122E, D123S, S162C, K173T, Q174K, D177E, T200A, Q207E, R211K, V245Q, E248D, D250E, S251N, A272P, K277R, T286A, E291D, V292I, E297A Q161K 
CB-3453 CB-3453 None None M184MV  V35T, E36D, T39LS, D121DY, D123E, S162A, K173T, Q174K, D177E, G196GE, Q197L, T200A, Q207E, V245MT, E248ED, T286A, E291D, V292I, I293V, P294T H96L, P97PL 
CB-3742 CB-3742 None None   V35T, E36D, D123E, I135V, S162A, T165I, K173AT, Q174G, D177E, I178IM, T200A, Q207E, V245Q, A272AP, K277R, T286A, E291D, P294T, L295M K82KT, H96HR, R125RT 
CB-4200 CB-4200 None None   T58S, F87FL, D123E, S162A, K173T, Q174R, D177E, Q207D, R211K, V245K, L283I, E291D, I293V, P294T  
CB-508 CB-508 Unknown Unknown M41L, T215CY  V35T, T39M, S162A, Q207E, A272P, V276VI, T286A, E297K, A299T